Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294560 | sp|Q9LUJ5|EBP2_ARATH | 65.164 | 244 | 80 | 2 | 41 | 283 | 13 | 252 | 6.50e-107 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294560 | A0A072TUA1 | 98.182 | 220 | 4 | 0 | 41 | 260 | 3 | 222 | 1.42e-153 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1254610 | Msa1294560 | 0.804586 | 2.012396e-49 | -8.615850e-47 |
| Msa1201650 | Msa1294560 | 0.851765 | 7.169003e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294560 | MtrunA17_Chr8g0371671 | 98.283 | 233 | 4 | 0 | 41 | 273 | 3 | 235 | 3.77e-156 | 436 |
| Msa1294560 | MtrunA17_Chr5g0410311 | 86.122 | 245 | 32 | 1 | 41 | 283 | 3 | 247 | 1.60e-143 | 404 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294560 | AT3G22660.1 | 65.164 | 244 | 80 | 2 | 41 | 283 | 13 | 252 | 6.61e-108 | 315 |
Find 71 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGCTGAACCATCTAAAA+AGG | 0.298870 | 8_3:-52379333 | Msa1294560:CDS |
| AGAAAGGGCCAAGCAGAAAA+AGG | 0.337714 | 8_3:-52378931 | Msa1294560:CDS |
| TGTATCCATTCCACATTCTC+TGG | 0.362791 | 8_3:+52379260 | None:intergenic |
| AGCCGGCGACGAACTCCGCC+TGG | 0.364260 | 8_3:+52380677 | None:intergenic |
| GGCTTCTTTCCCTTTCCAAA+GGG | 0.417551 | 8_3:+52378737 | None:intergenic |
| CTGAAGAGAGAAGAAAGGCC+AGG | 0.422247 | 8_3:-52378998 | Msa1294560:CDS |
| GAAAAGACCTGGAGTGTCTC+CGG | 0.423295 | 8_3:-52378790 | Msa1294560:CDS |
| AGATAATCTCTTGGCCTCCC+TGG | 0.430466 | 8_3:+52378980 | None:intergenic |
| TGGCTTCTTTCCCTTTCCAA+AGG | 0.434943 | 8_3:+52378736 | None:intergenic |
| AGTCACAGAAATTAAAAGAA+AGG | 0.442695 | 8_3:-52378947 | Msa1294560:CDS |
| GTGTCTCCGGGTGACCGATC+AGG | 0.444973 | 8_3:-52378777 | Msa1294560:CDS |
| TAGTCTGCAGGCCTTAGAAA+AGG | 0.445288 | 8_3:+52379104 | None:intergenic |
| CTTTGAGAAACTTCAGTCAA+TGG | 0.454306 | 8_3:-52379132 | Msa1294560:CDS |
| CGATGGCGCAGATAAGGCTT+TGG | 0.456534 | 8_3:-52378850 | Msa1294560:CDS |
| TGCAGACTATTATGCTGAAA+TGG | 0.457564 | 8_3:-52379090 | Msa1294560:CDS |
| CTGCTCTTGATCGATGTCAA+TGG | 0.460523 | 8_3:+52379229 | None:intergenic |
| GTCACAGAAATTAAAAGAAA+GGG | 0.462057 | 8_3:-52378946 | Msa1294560:CDS |
| TGCTGACGATGGCGCAGATA+AGG | 0.473187 | 8_3:-52378856 | Msa1294560:CDS |
| TTTGAGAAACTTCAGTCAAT+GGG | 0.475684 | 8_3:-52379131 | Msa1294560:CDS |
| ACATTGAATCTGTTAAGAAA+TGG | 0.479309 | 8_3:-52378905 | Msa1294560:CDS |
| GTAAGGCAAAGCAAGCCCTT+TGG | 0.485390 | 8_3:-52378752 | Msa1294560:CDS |
| AATGATGATACAATGGTTGA+TGG | 0.492459 | 8_3:-52379419 | Msa1294560:CDS |
| ACCCAGGCGGAGTTCGTCGC+CGG | 0.494675 | 8_3:-52380679 | Msa1294560:CDS |
| CAAAGCAAGCCCTTTGGAAA+GGG | 0.504675 | 8_3:-52378746 | Msa1294560:CDS |
| AACCTCTTTAGATAATCTCT+TGG | 0.505477 | 8_3:+52378971 | None:intergenic |
| TTACCTCCTGATCGGTCACC+CGG | 0.505687 | 8_3:+52378771 | None:intergenic |
| TTCTCACAGTTTCTTGCAGC+CGG | 0.509355 | 8_3:+52380660 | None:intergenic |
| CATAAGCTGGCCAGAGAATG+TGG | 0.514747 | 8_3:-52379270 | Msa1294560:CDS |
| AGATAAGGCTTTGGACTTCG+AGG | 0.515894 | 8_3:-52378841 | Msa1294560:CDS |
| AGATTGAATGGAGCTGCCTC+TGG | 0.515931 | 8_3:-52379444 | Msa1294560:intron |
| GGCATTGGAGGGTACTAGAC+AGG | 0.518118 | 8_3:-52379156 | Msa1294560:CDS |
| TCTTCTGATTCTGATTCAGA+TGG | 0.519325 | 8_3:+52379365 | None:intergenic |
| GCTTTGCCTTACCTCCTGAT+CGG | 0.526130 | 8_3:+52378763 | None:intergenic |
| AGAGGCTGAAGAGAGAAGAA+AGG | 0.526636 | 8_3:-52379003 | Msa1294560:CDS |
| GATGCTCTATTAGATAAACT+TGG | 0.532375 | 8_3:-52379296 | Msa1294560:CDS |
| AAAAGACCTGGAGTGTCTCC+GGG | 0.535827 | 8_3:-52378789 | Msa1294560:CDS |
| ATTAGCAGAGAAGCAGAAGA+TGG | 0.537363 | 8_3:-52379027 | Msa1294560:CDS |
| AGTCTGCAGGCCTTAGAAAA+GGG | 0.538151 | 8_3:+52379105 | None:intergenic |
| GCTGCAAGAAACTGTGAGAA+AGG | 0.546701 | 8_3:-52380657 | Msa1294560:intron |
| GCAAAGCAAGCCCTTTGGAA+AGG | 0.554253 | 8_3:-52378747 | Msa1294560:CDS |
| CGGTCAAAGAAGAAAAGACC+TGG | 0.554286 | 8_3:-52378801 | Msa1294560:CDS |
| GCCGGCGACGAACTCCGCCT+GGG | 0.560719 | 8_3:+52380678 | None:intergenic |
| ATTTCAGCATAATAGTCTGC+AGG | 0.562441 | 8_3:+52379092 | None:intergenic |
| TGAAGAGAGAAGAAAGGCCA+GGG | 0.563172 | 8_3:-52378997 | Msa1294560:CDS |
| ATAATCTCAAGCGCAATCCT+CGG | 0.563550 | 8_3:-52380768 | None:intergenic |
| CATTGACATCGATCAAGAGC+AGG | 0.572289 | 8_3:-52379228 | Msa1294560:CDS |
| ATAAACTTGGAGACATAAGC+TGG | 0.573791 | 8_3:-52379283 | Msa1294560:CDS |
| GGGTGACCGATCAGGAGGTA+AGG | 0.574615 | 8_3:-52378769 | Msa1294560:CDS |
| CGGTCACCCGGAGACACTCC+AGG | 0.576723 | 8_3:+52378783 | None:intergenic |
| GGCCAAGAGATTATCTAAAG+AGG | 0.579968 | 8_3:-52378973 | Msa1294560:CDS |
| AGAGAAGCAGAAGATGGTAG+AGG | 0.581371 | 8_3:-52379021 | Msa1294560:CDS |
| AGTAGATGTTAATGATGACT+TGG | 0.588825 | 8_3:-52379204 | Msa1294560:CDS |
| TTGAATCTGTTAAGAAATGG+AGG | 0.588933 | 8_3:-52378902 | Msa1294560:CDS |
| TTTGGACTTCGAGGACGGAA+AGG | 0.593158 | 8_3:-52378832 | Msa1294560:CDS |
| AGGAAGCAGAGGCAACAAAG+TGG | 0.602796 | 8_3:-52378882 | Msa1294560:CDS |
| AAGGCTTTGGACTTCGAGGA+CGG | 0.606211 | 8_3:-52378837 | Msa1294560:CDS |
| GGAAGCAGAGGCAACAAAGT+GGG | 0.615514 | 8_3:-52378881 | Msa1294560:CDS |
| CAAAGTGGGTTTGCTGACGA+TGG | 0.619387 | 8_3:-52378867 | Msa1294560:CDS |
| TTAAGAAATGGAGGAAGCAG+AGG | 0.621715 | 8_3:-52378893 | Msa1294560:CDS |
| CATTGACTGAAGTTTCTCAA+AGG | 0.625618 | 8_3:+52379133 | None:intergenic |
| CAGGAATGATGATGGAGCCG+AGG | 0.626270 | 8_3:+52380751 | None:intergenic |
| TCTCCGGGTGACCGATCAGG+AGG | 0.644315 | 8_3:-52378774 | Msa1294560:CDS |
| GCTGGCCAGAGAATGTGGAA+TGG | 0.647233 | 8_3:-52379265 | Msa1294560:CDS |
| AGAGAGAAGAAAGGCCAGGG+AGG | 0.661477 | 8_3:-52378994 | Msa1294560:CDS |
| TCTGGTTAATGATGATACAA+TGG | 0.663757 | 8_3:-52379426 | Msa1294560:CDS |
| ATTGTATCATCATTAACCAG+AGG | 0.690136 | 8_3:+52379428 | None:intergenic |
| TGAAGCTGAGTATTTGAGTG+AGG | 0.691291 | 8_3:-52379396 | Msa1294560:CDS |
| AGGACGGAAAGGTGTTCGAG+CGG | 0.718016 | 8_3:-52378821 | Msa1294560:CDS |
| CAGCAAATTACAGAACACCC+AGG | 0.737158 | 8_3:-52380695 | Msa1294560:CDS |
| GGTGAAGACAGATAGCCACA+TGG | 0.738846 | 8_3:-52379069 | Msa1294560:CDS |
| CAAATTACAGAACACCCAGG+CGG | 0.767434 | 8_3:-52380692 | Msa1294560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTATTTTTCTTC+AGG | + | chr8_3:52378748-52378767 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTAATGA+AGG | + | chr8_3:52379279-52379298 | None:intergenic | 10.0% |
| !! | TTATTATGTTTATATATTAC+TGG | - | chr8_3:52379670-52379689 | Msa1294560:intron | 10.0% |
| !!! | TTAATTTTTTATTTTTCTTC+AGG | + | chr8_3:52378748-52378767 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTAATGA+AGG | + | chr8_3:52379279-52379298 | None:intergenic | 10.0% |
| !! | TTATTATGTTTATATATTAC+TGG | - | chr8_3:52379670-52379689 | Msa1294560:intron | 10.0% |
| !!! | TTTTTTTTTTAATGAAGGTT+TGG | + | chr8_3:52379274-52379293 | None:intergenic | 15.0% |
| !! | TAATAATAGATACTTAATCA+TGG | + | chr8_3:52379656-52379675 | None:intergenic | 15.0% |
| !! | AAATTTCAATAGTTCATTAA+GGG | + | chr8_3:52379728-52379747 | None:intergenic | 15.0% |
| !! | AAAATTTCAATAGTTCATTA+AGG | + | chr8_3:52379729-52379748 | None:intergenic | 15.0% |
| !!! | CATTATTTTAGACATTATTT+TGG | - | chr8_3:52379941-52379960 | Msa1294560:intron | 15.0% |
| !!! | TTTTTTTTTTAATGAAGGTT+TGG | + | chr8_3:52379274-52379293 | None:intergenic | 15.0% |
| !! | TAATAATAGATACTTAATCA+TGG | + | chr8_3:52379656-52379675 | None:intergenic | 15.0% |
| !! | AAATTTCAATAGTTCATTAA+GGG | + | chr8_3:52379728-52379747 | None:intergenic | 15.0% |
| !! | AAAATTTCAATAGTTCATTA+AGG | + | chr8_3:52379729-52379748 | None:intergenic | 15.0% |
| !!! | CATTATTTTAGACATTATTT+TGG | - | chr8_3:52379941-52379960 | Msa1294560:intron | 15.0% |
| !!! | TTTTCATCTTCTTGTTTATT+CGG | - | chr8_3:52378881-52378900 | Msa1294560:CDS | 20.0% |
| !! | ATTTCGATATTAAACAATGT+AGG | + | chr8_3:52379004-52379023 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAGAAAAGAAAC+TGG | - | chr8_3:52379290-52379309 | Msa1294560:CDS | 20.0% |
| !! | AAAAAAGAAGAAAAGAAACT+GGG | - | chr8_3:52379291-52379310 | Msa1294560:CDS | 20.0% |
| !! | AATTTCAATAGTTCATTAAG+GGG | + | chr8_3:52379727-52379746 | None:intergenic | 20.0% |
| !!! | ATGTCTAAAATAATGTCTAA+TGG | + | chr8_3:52379936-52379955 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTTATTTACATGT+TGG | - | chr8_3:52379957-52379976 | Msa1294560:intron | 20.0% |
| !!! | AAGACAAGTAAAAACATTTT+AGG | + | chr8_3:52379998-52380017 | None:intergenic | 20.0% |
| !!! | TTTTCATCTTCTTGTTTATT+CGG | - | chr8_3:52378881-52378900 | Msa1294560:CDS | 20.0% |
| !! | ATTTCGATATTAAACAATGT+AGG | + | chr8_3:52379004-52379023 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAGAAAAGAAAC+TGG | - | chr8_3:52379290-52379309 | Msa1294560:CDS | 20.0% |
| !! | AAAAAAGAAGAAAAGAAACT+GGG | - | chr8_3:52379291-52379310 | Msa1294560:CDS | 20.0% |
| !! | AATTTCAATAGTTCATTAAG+GGG | + | chr8_3:52379727-52379746 | None:intergenic | 20.0% |
| !!! | ATGTCTAAAATAATGTCTAA+TGG | + | chr8_3:52379936-52379955 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTTATTTACATGT+TGG | - | chr8_3:52379957-52379976 | Msa1294560:intron | 20.0% |
| !!! | AAGACAAGTAAAAACATTTT+AGG | + | chr8_3:52379998-52380017 | None:intergenic | 20.0% |
| !!! | TTCTGTAATTTGCTGTTTTA+GGG | + | chr8_3:52378777-52378796 | None:intergenic | 25.0% |
| ! | GAATAAACAAGAAGATGAAA+AGG | + | chr8_3:52378882-52378901 | None:intergenic | 25.0% |
| ! | AATATCGAAATGCATGATTA+AGG | - | chr8_3:52379013-52379032 | Msa1294560:CDS | 25.0% |
| ! | ATATCGAAATGCATGATTAA+GGG | - | chr8_3:52379014-52379033 | Msa1294560:CDS | 25.0% |
| ! | TCAAATAAATCAATCCAAAC+AGG | + | chr8_3:52379040-52379059 | None:intergenic | 25.0% |
| !!! | ATTAAGTTGTTTTTCCAAAC+AGG | - | chr8_3:52379211-52379230 | Msa1294560:CDS | 25.0% |
| !! | AGGTTTGGTATTAACTATTA+AGG | + | chr8_3:52379259-52379278 | None:intergenic | 25.0% |
| !! | AAAGTATTAGACAAAAGAAG+TGG | + | chr8_3:52379367-52379386 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAATTTGTGTTA+TGG | - | chr8_3:52379506-52379525 | Msa1294560:intron | 25.0% |
| ! | GAAAAATTTGTGTTATGGTT+CGG | - | chr8_3:52379511-52379530 | Msa1294560:intron | 25.0% |
| ! | AACAATTGTATGGAAGTTAA+AGG | + | chr8_3:52379828-52379847 | None:intergenic | 25.0% |
| ! | CTTCCATACAATTGTTAATT+CGG | - | chr8_3:52379832-52379851 | Msa1294560:intron | 25.0% |
| ! | TAATACCATGATAGATTGAA+TGG | - | chr8_3:52380021-52380040 | Msa1294560:intron | 25.0% |
| !! | TTATTTACTGCCTTTTTAGA+TGG | + | chr8_3:52380157-52380176 | None:intergenic | 25.0% |
| ! | AGTCACAGAAATTAAAAGAA+AGG | - | chr8_3:52380530-52380549 | Msa1294560:intron | 25.0% |
| ! | GTCACAGAAATTAAAAGAAA+GGG | - | chr8_3:52380531-52380550 | Msa1294560:intron | 25.0% |
| ! | ACATTGAATCTGTTAAGAAA+TGG | - | chr8_3:52380572-52380591 | Msa1294560:intron | 25.0% |
| !!! | TTCTGTAATTTGCTGTTTTA+GGG | + | chr8_3:52378777-52378796 | None:intergenic | 25.0% |
| ! | GAATAAACAAGAAGATGAAA+AGG | + | chr8_3:52378882-52378901 | None:intergenic | 25.0% |
| ! | AATATCGAAATGCATGATTA+AGG | - | chr8_3:52379013-52379032 | Msa1294560:CDS | 25.0% |
| ! | ATATCGAAATGCATGATTAA+GGG | - | chr8_3:52379014-52379033 | Msa1294560:CDS | 25.0% |
| ! | TCAAATAAATCAATCCAAAC+AGG | + | chr8_3:52379040-52379059 | None:intergenic | 25.0% |
| !!! | ATTAAGTTGTTTTTCCAAAC+AGG | - | chr8_3:52379211-52379230 | Msa1294560:CDS | 25.0% |
| !! | AGGTTTGGTATTAACTATTA+AGG | + | chr8_3:52379259-52379278 | None:intergenic | 25.0% |
| !! | AAAGTATTAGACAAAAGAAG+TGG | + | chr8_3:52379367-52379386 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAATTTGTGTTA+TGG | - | chr8_3:52379506-52379525 | Msa1294560:intron | 25.0% |
| ! | GAAAAATTTGTGTTATGGTT+CGG | - | chr8_3:52379511-52379530 | Msa1294560:intron | 25.0% |
| ! | AACAATTGTATGGAAGTTAA+AGG | + | chr8_3:52379828-52379847 | None:intergenic | 25.0% |
| ! | CTTCCATACAATTGTTAATT+CGG | - | chr8_3:52379832-52379851 | Msa1294560:intron | 25.0% |
| ! | TAATACCATGATAGATTGAA+TGG | - | chr8_3:52380021-52380040 | Msa1294560:intron | 25.0% |
| !! | TTATTTACTGCCTTTTTAGA+TGG | + | chr8_3:52380157-52380176 | None:intergenic | 25.0% |
| ! | AGTCACAGAAATTAAAAGAA+AGG | - | chr8_3:52380530-52380549 | Msa1294560:intron | 25.0% |
| ! | GTCACAGAAATTAAAAGAAA+GGG | - | chr8_3:52380531-52380550 | Msa1294560:intron | 25.0% |
| ! | ACATTGAATCTGTTAAGAAA+TGG | - | chr8_3:52380572-52380591 | Msa1294560:intron | 25.0% |
| ! | TTTTTCTTCAGGAATGATGA+TGG | + | chr8_3:52378737-52378756 | None:intergenic | 30.0% |
| !!! | GTTCTGTAATTTGCTGTTTT+AGG | + | chr8_3:52378778-52378797 | None:intergenic | 30.0% |
| ATCAGTATCAATAGAGAGAA+AGG | - | chr8_3:52379488-52379507 | Msa1294560:intron | 30.0% | |
| TCAGTATCAATAGAGAGAAA+GGG | - | chr8_3:52379489-52379508 | Msa1294560:intron | 30.0% | |
| ! | CAGTTGCGATTTTCATTAAT+TGG | + | chr8_3:52379596-52379615 | None:intergenic | 30.0% |
| GATCCGAATTAACAATTGTA+TGG | + | chr8_3:52379838-52379857 | None:intergenic | 30.0% | |
| ! | CATGTTGGACTTCATTATTT+TGG | - | chr8_3:52379972-52379991 | Msa1294560:intron | 30.0% |
| ATTGTATCATCATTAACCAG+AGG | + | chr8_3:52380052-52380071 | None:intergenic | 30.0% | |
| TCTGGTTAATGATGATACAA+TGG | - | chr8_3:52380051-52380070 | Msa1294560:intron | 30.0% | |
| AATGATGATACAATGGTTGA+TGG | - | chr8_3:52380058-52380077 | Msa1294560:intron | 30.0% | |
| ATTAGCTGAACCATCTAAAA+AGG | - | chr8_3:52380144-52380163 | Msa1294560:intron | 30.0% | |
| GATGCTCTATTAGATAAACT+TGG | - | chr8_3:52380181-52380200 | Msa1294560:intron | 30.0% | |
| AGTAGATGTTAATGATGACT+TGG | - | chr8_3:52380273-52380292 | Msa1294560:intron | 30.0% | |
| TTTGAGAAACTTCAGTCAAT+GGG | - | chr8_3:52380346-52380365 | Msa1294560:intron | 30.0% | |
| ACATGGAAAAAGTGAAAAGT+CGG | - | chr8_3:52380425-52380444 | Msa1294560:intron | 30.0% | |
| AACCTCTTTAGATAATCTCT+TGG | + | chr8_3:52380509-52380528 | None:intergenic | 30.0% | |
| TTGAATCTGTTAAGAAATGG+AGG | - | chr8_3:52380575-52380594 | Msa1294560:intron | 30.0% | |
| ! | TTTTTCTTCAGGAATGATGA+TGG | + | chr8_3:52378737-52378756 | None:intergenic | 30.0% |
| !!! | GTTCTGTAATTTGCTGTTTT+AGG | + | chr8_3:52378778-52378797 | None:intergenic | 30.0% |
| ATCAGTATCAATAGAGAGAA+AGG | - | chr8_3:52379488-52379507 | Msa1294560:intron | 30.0% | |
| TCAGTATCAATAGAGAGAAA+GGG | - | chr8_3:52379489-52379508 | Msa1294560:intron | 30.0% | |
| ! | CAGTTGCGATTTTCATTAAT+TGG | + | chr8_3:52379596-52379615 | None:intergenic | 30.0% |
| GATCCGAATTAACAATTGTA+TGG | + | chr8_3:52379838-52379857 | None:intergenic | 30.0% | |
| ! | CATGTTGGACTTCATTATTT+TGG | - | chr8_3:52379972-52379991 | Msa1294560:intron | 30.0% |
| ATTGTATCATCATTAACCAG+AGG | + | chr8_3:52380052-52380071 | None:intergenic | 30.0% | |
| TCTGGTTAATGATGATACAA+TGG | - | chr8_3:52380051-52380070 | Msa1294560:intron | 30.0% | |
| AATGATGATACAATGGTTGA+TGG | - | chr8_3:52380058-52380077 | Msa1294560:intron | 30.0% | |
| ATTAGCTGAACCATCTAAAA+AGG | - | chr8_3:52380144-52380163 | Msa1294560:intron | 30.0% | |
| GATGCTCTATTAGATAAACT+TGG | - | chr8_3:52380181-52380200 | Msa1294560:intron | 30.0% | |
| AGTAGATGTTAATGATGACT+TGG | - | chr8_3:52380273-52380292 | Msa1294560:intron | 30.0% | |
| TTTGAGAAACTTCAGTCAAT+GGG | - | chr8_3:52380346-52380365 | Msa1294560:intron | 30.0% | |
| ACATGGAAAAAGTGAAAAGT+CGG | - | chr8_3:52380425-52380444 | Msa1294560:intron | 30.0% | |
| AACCTCTTTAGATAATCTCT+TGG | + | chr8_3:52380509-52380528 | None:intergenic | 30.0% | |
| TTGAATCTGTTAAGAAATGG+AGG | - | chr8_3:52380575-52380594 | Msa1294560:intron | 30.0% | |
| ATTAAACAATGTAGGCAGAG+AGG | + | chr8_3:52378996-52379015 | None:intergenic | 35.0% | |
| ATGTTTATGTCCACTATGAC+AGG | + | chr8_3:52379326-52379345 | None:intergenic | 35.0% | |
| !! | TGTCATAGTGGACATAAACA+TGG | - | chr8_3:52379325-52379344 | Msa1294560:CDS | 35.0% |
| TCACCTGAAATTAGTGTAAC+TGG | - | chr8_3:52379393-52379412 | Msa1294560:CDS | 35.0% | |
| CACCTGAAATTAGTGTAACT+GGG | - | chr8_3:52379394-52379413 | Msa1294560:CDS | 35.0% | |
| ATGAATTGCAGAGCAAAGTT+GGG | + | chr8_3:52379456-52379475 | None:intergenic | 35.0% | |
| TATGAATTGCAGAGCAAAGT+TGG | + | chr8_3:52379457-52379476 | None:intergenic | 35.0% | |
| TGTCTGCCATAGAATATATG+TGG | - | chr8_3:52379798-52379817 | Msa1294560:intron | 35.0% | |
| GTCTGCCATAGAATATATGT+GGG | - | chr8_3:52379799-52379818 | Msa1294560:intron | 35.0% | |
| GGATTCCCACATATATTCTA+TGG | + | chr8_3:52379807-52379826 | None:intergenic | 35.0% | |
| TTGTTAATTCGGATCGTGTA+TGG | - | chr8_3:52379843-52379862 | Msa1294560:intron | 35.0% | |
| AAAAAGATTCCTCAGCCTAA+AGG | + | chr8_3:52379912-52379931 | None:intergenic | 35.0% | |
| TCTTCTGATTCTGATTCAGA+TGG | + | chr8_3:52380115-52380134 | None:intergenic | 35.0% | |
| ATAAACTTGGAGACATAAGC+TGG | - | chr8_3:52380194-52380213 | Msa1294560:intron | 35.0% | |
| ! | CATTGACTGAAGTTTCTCAA+AGG | + | chr8_3:52380347-52380366 | None:intergenic | 35.0% |
| ! | CTTTGAGAAACTTCAGTCAA+TGG | - | chr8_3:52380345-52380364 | Msa1294560:intron | 35.0% |
| ATTTCAGCATAATAGTCTGC+AGG | + | chr8_3:52380388-52380407 | None:intergenic | 35.0% | |
| TGCAGACTATTATGCTGAAA+TGG | - | chr8_3:52380387-52380406 | Msa1294560:intron | 35.0% | |
| !!! | GACTTTTCACTTTTTCCATG+TGG | + | chr8_3:52380426-52380445 | None:intergenic | 35.0% |
| ATTAAACAATGTAGGCAGAG+AGG | + | chr8_3:52378996-52379015 | None:intergenic | 35.0% | |
| ATGTTTATGTCCACTATGAC+AGG | + | chr8_3:52379326-52379345 | None:intergenic | 35.0% | |
| !! | TGTCATAGTGGACATAAACA+TGG | - | chr8_3:52379325-52379344 | Msa1294560:CDS | 35.0% |
| TCACCTGAAATTAGTGTAAC+TGG | - | chr8_3:52379393-52379412 | Msa1294560:CDS | 35.0% | |
| CACCTGAAATTAGTGTAACT+GGG | - | chr8_3:52379394-52379413 | Msa1294560:CDS | 35.0% | |
| ATGAATTGCAGAGCAAAGTT+GGG | + | chr8_3:52379456-52379475 | None:intergenic | 35.0% | |
| TATGAATTGCAGAGCAAAGT+TGG | + | chr8_3:52379457-52379476 | None:intergenic | 35.0% | |
| TGTCTGCCATAGAATATATG+TGG | - | chr8_3:52379798-52379817 | Msa1294560:intron | 35.0% | |
| GTCTGCCATAGAATATATGT+GGG | - | chr8_3:52379799-52379818 | Msa1294560:intron | 35.0% | |
| GGATTCCCACATATATTCTA+TGG | + | chr8_3:52379807-52379826 | None:intergenic | 35.0% | |
| TTGTTAATTCGGATCGTGTA+TGG | - | chr8_3:52379843-52379862 | Msa1294560:intron | 35.0% | |
| AAAAAGATTCCTCAGCCTAA+AGG | + | chr8_3:52379912-52379931 | None:intergenic | 35.0% | |
| TCTTCTGATTCTGATTCAGA+TGG | + | chr8_3:52380115-52380134 | None:intergenic | 35.0% | |
| ATAAACTTGGAGACATAAGC+TGG | - | chr8_3:52380194-52380213 | Msa1294560:intron | 35.0% | |
| ! | CATTGACTGAAGTTTCTCAA+AGG | + | chr8_3:52380347-52380366 | None:intergenic | 35.0% |
| ! | CTTTGAGAAACTTCAGTCAA+TGG | - | chr8_3:52380345-52380364 | Msa1294560:intron | 35.0% |
| ATTTCAGCATAATAGTCTGC+AGG | + | chr8_3:52380388-52380407 | None:intergenic | 35.0% | |
| TGCAGACTATTATGCTGAAA+TGG | - | chr8_3:52380387-52380406 | Msa1294560:intron | 35.0% | |
| !!! | GACTTTTCACTTTTTCCATG+TGG | + | chr8_3:52380426-52380445 | None:intergenic | 35.0% |
| ! | AGCTAGTTTGAGCTAAGCTA+TGG | + | chr8_3:52378934-52378953 | None:intergenic | 40.0% |
| ! | CTTAGCTCAAACTAGCTTCA+GGG | - | chr8_3:52378937-52378956 | Msa1294560:CDS | 40.0% |
| TCTGTGAATTAGGTCCTGTT+TGG | + | chr8_3:52379228-52379247 | None:intergenic | 40.0% | |
| AAACAGGACCTAATTCACAG+AGG | - | chr8_3:52379227-52379246 | Msa1294560:CDS | 40.0% | |
| AACAGGACCTAATTCACAGA+GGG | - | chr8_3:52379228-52379247 | Msa1294560:CDS | 40.0% | |
| GATGATGAATCCTGTCATAG+TGG | - | chr8_3:52379313-52379332 | Msa1294560:CDS | 40.0% | |
| ! | TAGTGGACATAAACATGGCT+AGG | - | chr8_3:52379330-52379349 | Msa1294560:CDS | 40.0% |
| GTCCCAGTTACACTAATTTC+AGG | + | chr8_3:52379399-52379418 | None:intergenic | 40.0% | |
| !! | TATGTTCTAAGAGCTGCCAA+AGG | - | chr8_3:52379545-52379564 | Msa1294560:intron | 40.0% |
| !! | ATGTTCTAAGAGCTGCCAAA+GGG | - | chr8_3:52379546-52379565 | Msa1294560:intron | 40.0% |
| GCAATCTGTTCGAAGATGTT+AGG | - | chr8_3:52379568-52379587 | Msa1294560:intron | 40.0% | |
| CAGCTCCATTCAATCTATCA+TGG | + | chr8_3:52380029-52380048 | None:intergenic | 40.0% | |
| TGAAGCTGAGTATTTGAGTG+AGG | - | chr8_3:52380081-52380100 | Msa1294560:intron | 40.0% | |
| TGTATCCATTCCACATTCTC+TGG | + | chr8_3:52380220-52380239 | None:intergenic | 40.0% | |
| ! | AGAGCTTGCATTTTACACTC+AGG | - | chr8_3:52380300-52380319 | Msa1294560:intron | 40.0% |
| ! | TGCATTTTACACTCAGGCAT+TGG | - | chr8_3:52380306-52380325 | Msa1294560:intron | 40.0% |
| !!! | ATTTTACACTCAGGCATTGG+AGG | - | chr8_3:52380309-52380328 | Msa1294560:intron | 40.0% |
| !!! | TTTTACACTCAGGCATTGGA+GGG | - | chr8_3:52380310-52380329 | Msa1294560:intron | 40.0% |
| ATTAGCAGAGAAGCAGAAGA+TGG | - | chr8_3:52380450-52380469 | Msa1294560:intron | 40.0% | |
| GGCCAAGAGATTATCTAAAG+AGG | - | chr8_3:52380504-52380523 | Msa1294560:intron | 40.0% | |
| ! | AATGTCGTCCTTTTTCTGCT+TGG | + | chr8_3:52380557-52380576 | None:intergenic | 40.0% |
| TTAAGAAATGGAGGAAGCAG+AGG | - | chr8_3:52380584-52380603 | Msa1294560:intron | 40.0% | |
| ! | AGCTAGTTTGAGCTAAGCTA+TGG | + | chr8_3:52378934-52378953 | None:intergenic | 40.0% |
| ! | CTTAGCTCAAACTAGCTTCA+GGG | - | chr8_3:52378937-52378956 | Msa1294560:CDS | 40.0% |
| TCTGTGAATTAGGTCCTGTT+TGG | + | chr8_3:52379228-52379247 | None:intergenic | 40.0% | |
| AAACAGGACCTAATTCACAG+AGG | - | chr8_3:52379227-52379246 | Msa1294560:CDS | 40.0% | |
| AACAGGACCTAATTCACAGA+GGG | - | chr8_3:52379228-52379247 | Msa1294560:CDS | 40.0% | |
| GATGATGAATCCTGTCATAG+TGG | - | chr8_3:52379313-52379332 | Msa1294560:CDS | 40.0% | |
| ! | TAGTGGACATAAACATGGCT+AGG | - | chr8_3:52379330-52379349 | Msa1294560:CDS | 40.0% |
| GTCCCAGTTACACTAATTTC+AGG | + | chr8_3:52379399-52379418 | None:intergenic | 40.0% | |
| !! | TATGTTCTAAGAGCTGCCAA+AGG | - | chr8_3:52379545-52379564 | Msa1294560:intron | 40.0% |
| !! | ATGTTCTAAGAGCTGCCAAA+GGG | - | chr8_3:52379546-52379565 | Msa1294560:intron | 40.0% |
| GCAATCTGTTCGAAGATGTT+AGG | - | chr8_3:52379568-52379587 | Msa1294560:intron | 40.0% | |
| CAGCTCCATTCAATCTATCA+TGG | + | chr8_3:52380029-52380048 | None:intergenic | 40.0% | |
| TGAAGCTGAGTATTTGAGTG+AGG | - | chr8_3:52380081-52380100 | Msa1294560:intron | 40.0% | |
| TGTATCCATTCCACATTCTC+TGG | + | chr8_3:52380220-52380239 | None:intergenic | 40.0% | |
| ! | AGAGCTTGCATTTTACACTC+AGG | - | chr8_3:52380300-52380319 | Msa1294560:intron | 40.0% |
| ! | TGCATTTTACACTCAGGCAT+TGG | - | chr8_3:52380306-52380325 | Msa1294560:intron | 40.0% |
| !!! | ATTTTACACTCAGGCATTGG+AGG | - | chr8_3:52380309-52380328 | Msa1294560:intron | 40.0% |
| !!! | TTTTACACTCAGGCATTGGA+GGG | - | chr8_3:52380310-52380329 | Msa1294560:intron | 40.0% |
| ATTAGCAGAGAAGCAGAAGA+TGG | - | chr8_3:52380450-52380469 | Msa1294560:intron | 40.0% | |
| GGCCAAGAGATTATCTAAAG+AGG | - | chr8_3:52380504-52380523 | Msa1294560:intron | 40.0% | |
| ! | AATGTCGTCCTTTTTCTGCT+TGG | + | chr8_3:52380557-52380576 | None:intergenic | 40.0% |
| TTAAGAAATGGAGGAAGCAG+AGG | - | chr8_3:52380584-52380603 | Msa1294560:intron | 40.0% | |
| CAGCAAATTACAGAACACCC+AGG | - | chr8_3:52378782-52378801 | Msa1294560:CDS | 45.0% | |
| CAAATTACAGAACACCCAGG+CGG | - | chr8_3:52378785-52378804 | Msa1294560:CDS | 45.0% | |
| TTCTCACAGTTTCTTGCAGC+CGG | + | chr8_3:52378820-52378839 | None:intergenic | 45.0% | |
| GCTGCAAGAAACTGTGAGAA+AGG | - | chr8_3:52378820-52378839 | Msa1294560:CDS | 45.0% | |
| ! | GCTTAGCTCAAACTAGCTTC+AGG | - | chr8_3:52378936-52378955 | Msa1294560:CDS | 45.0% |
| TGCATGATTAAGGGCCTGTT+TGG | - | chr8_3:52379023-52379042 | Msa1294560:CDS | 45.0% | |
| TAACTGGGACATAGTTGCGA+GGG | - | chr8_3:52379409-52379428 | Msa1294560:CDS | 45.0% | |
| TCTTCGAACAGATTGCCCTT+TGG | + | chr8_3:52379564-52379583 | None:intergenic | 45.0% | |
| AGATTCCTCAGCCTAAAGGT+GGG | + | chr8_3:52379908-52379927 | None:intergenic | 45.0% | |
| AAGATTCCTCAGCCTAAAGG+TGG | + | chr8_3:52379909-52379928 | None:intergenic | 45.0% | |
| CTGCTCTTGATCGATGTCAA+TGG | + | chr8_3:52380251-52380270 | None:intergenic | 45.0% | |
| CATTGACATCGATCAAGAGC+AGG | - | chr8_3:52380249-52380268 | Msa1294560:intron | 45.0% | |
| ! | CAATGGGTCTCCCTTTTCTA+AGG | - | chr8_3:52380362-52380381 | Msa1294560:intron | 45.0% |
| AGTCTGCAGGCCTTAGAAAA+GGG | + | chr8_3:52380375-52380394 | None:intergenic | 45.0% | |
| TAGTCTGCAGGCCTTAGAAA+AGG | + | chr8_3:52380376-52380395 | None:intergenic | 45.0% | |
| AGAGAAGCAGAAGATGGTAG+AGG | - | chr8_3:52380456-52380475 | Msa1294560:intron | 45.0% | |
| AGAGGCTGAAGAGAGAAGAA+AGG | - | chr8_3:52380474-52380493 | Msa1294560:intron | 45.0% | |
| TGAAGAGAGAAGAAAGGCCA+GGG | - | chr8_3:52380480-52380499 | Msa1294560:intron | 45.0% | |
| AGAAAGGGCCAAGCAGAAAA+AGG | - | chr8_3:52380546-52380565 | Msa1294560:intron | 45.0% | |
| !! | AGATAAGGCTTTGGACTTCG+AGG | - | chr8_3:52380636-52380655 | Msa1294560:intron | 45.0% |
| CGGTCAAAGAAGAAAAGACC+TGG | - | chr8_3:52380676-52380695 | Msa1294560:CDS | 45.0% | |
| ! | CAAAGCAAGCCCTTTGGAAA+GGG | - | chr8_3:52380731-52380750 | Msa1294560:CDS | 45.0% |
| GGCTTCTTTCCCTTTCCAAA+GGG | + | chr8_3:52380743-52380762 | None:intergenic | 45.0% | |
| TGGCTTCTTTCCCTTTCCAA+AGG | + | chr8_3:52380744-52380763 | None:intergenic | 45.0% | |
| CAGCAAATTACAGAACACCC+AGG | - | chr8_3:52378782-52378801 | Msa1294560:CDS | 45.0% | |
| CAAATTACAGAACACCCAGG+CGG | - | chr8_3:52378785-52378804 | Msa1294560:CDS | 45.0% | |
| TTCTCACAGTTTCTTGCAGC+CGG | + | chr8_3:52378820-52378839 | None:intergenic | 45.0% | |
| GCTGCAAGAAACTGTGAGAA+AGG | - | chr8_3:52378820-52378839 | Msa1294560:CDS | 45.0% | |
| ! | GCTTAGCTCAAACTAGCTTC+AGG | - | chr8_3:52378936-52378955 | Msa1294560:CDS | 45.0% |
| TGCATGATTAAGGGCCTGTT+TGG | - | chr8_3:52379023-52379042 | Msa1294560:CDS | 45.0% | |
| TAACTGGGACATAGTTGCGA+GGG | - | chr8_3:52379409-52379428 | Msa1294560:CDS | 45.0% | |
| TCTTCGAACAGATTGCCCTT+TGG | + | chr8_3:52379564-52379583 | None:intergenic | 45.0% | |
| AGATTCCTCAGCCTAAAGGT+GGG | + | chr8_3:52379908-52379927 | None:intergenic | 45.0% | |
| AAGATTCCTCAGCCTAAAGG+TGG | + | chr8_3:52379909-52379928 | None:intergenic | 45.0% | |
| CTGCTCTTGATCGATGTCAA+TGG | + | chr8_3:52380251-52380270 | None:intergenic | 45.0% | |
| CATTGACATCGATCAAGAGC+AGG | - | chr8_3:52380249-52380268 | Msa1294560:intron | 45.0% | |
| ! | CAATGGGTCTCCCTTTTCTA+AGG | - | chr8_3:52380362-52380381 | Msa1294560:intron | 45.0% |
| AGTCTGCAGGCCTTAGAAAA+GGG | + | chr8_3:52380375-52380394 | None:intergenic | 45.0% | |
| TAGTCTGCAGGCCTTAGAAA+AGG | + | chr8_3:52380376-52380395 | None:intergenic | 45.0% | |
| AGAGAAGCAGAAGATGGTAG+AGG | - | chr8_3:52380456-52380475 | Msa1294560:intron | 45.0% | |
| AGAGGCTGAAGAGAGAAGAA+AGG | - | chr8_3:52380474-52380493 | Msa1294560:intron | 45.0% | |
| TGAAGAGAGAAGAAAGGCCA+GGG | - | chr8_3:52380480-52380499 | Msa1294560:intron | 45.0% | |
| AGAAAGGGCCAAGCAGAAAA+AGG | - | chr8_3:52380546-52380565 | Msa1294560:intron | 45.0% | |
| !! | AGATAAGGCTTTGGACTTCG+AGG | - | chr8_3:52380636-52380655 | Msa1294560:intron | 45.0% |
| CGGTCAAAGAAGAAAAGACC+TGG | - | chr8_3:52380676-52380695 | Msa1294560:CDS | 45.0% | |
| ! | CAAAGCAAGCCCTTTGGAAA+GGG | - | chr8_3:52380731-52380750 | Msa1294560:CDS | 45.0% |
| GGCTTCTTTCCCTTTCCAAA+GGG | + | chr8_3:52380743-52380762 | None:intergenic | 45.0% | |
| TGGCTTCTTTCCCTTTCCAA+AGG | + | chr8_3:52380744-52380763 | None:intergenic | 45.0% | |
| GGCACAACCCTCTGTGAATT+AGG | + | chr8_3:52379238-52379257 | None:intergenic | 50.0% | |
| GTAACTGGGACATAGTTGCG+AGG | - | chr8_3:52379408-52379427 | Msa1294560:CDS | 50.0% | |
| ATTCCTCAGCCTAAAGGTGG+GGG | + | chr8_3:52379906-52379925 | None:intergenic | 50.0% | |
| GATTCCTCAGCCTAAAGGTG+GGG | + | chr8_3:52379907-52379926 | None:intergenic | 50.0% | |
| AGATTGAATGGAGCTGCCTC+TGG | - | chr8_3:52380033-52380052 | Msa1294560:intron | 50.0% | |
| CATAAGCTGGCCAGAGAATG+TGG | - | chr8_3:52380207-52380226 | Msa1294560:intron | 50.0% | |
| GGTGAAGACAGATAGCCACA+TGG | - | chr8_3:52380408-52380427 | Msa1294560:intron | 50.0% | |
| CTGAAGAGAGAAGAAAGGCC+AGG | - | chr8_3:52380479-52380498 | Msa1294560:intron | 50.0% | |
| AGATAATCTCTTGGCCTCCC+TGG | + | chr8_3:52380500-52380519 | None:intergenic | 50.0% | |
| AGGAAGCAGAGGCAACAAAG+TGG | - | chr8_3:52380595-52380614 | Msa1294560:intron | 50.0% | |
| GGAAGCAGAGGCAACAAAGT+GGG | - | chr8_3:52380596-52380615 | Msa1294560:intron | 50.0% | |
| !! | CAAAGTGGGTTTGCTGACGA+TGG | - | chr8_3:52380610-52380629 | Msa1294560:intron | 50.0% |
| !! | AAGGCTTTGGACTTCGAGGA+CGG | - | chr8_3:52380640-52380659 | Msa1294560:intron | 50.0% |
| TTTGGACTTCGAGGACGGAA+AGG | - | chr8_3:52380645-52380664 | Msa1294560:intron | 50.0% | |
| ! | GAAAAGACCTGGAGTGTCTC+CGG | - | chr8_3:52380687-52380706 | Msa1294560:CDS | 50.0% |
| ! | AAAAGACCTGGAGTGTCTCC+GGG | - | chr8_3:52380688-52380707 | Msa1294560:CDS | 50.0% |
| GCTTTGCCTTACCTCCTGAT+CGG | + | chr8_3:52380717-52380736 | None:intergenic | 50.0% | |
| GTAAGGCAAAGCAAGCCCTT+TGG | - | chr8_3:52380725-52380744 | Msa1294560:CDS | 50.0% | |
| ! | GCAAAGCAAGCCCTTTGGAA+AGG | - | chr8_3:52380730-52380749 | Msa1294560:CDS | 50.0% |
| GGCACAACCCTCTGTGAATT+AGG | + | chr8_3:52379238-52379257 | None:intergenic | 50.0% | |
| GTAACTGGGACATAGTTGCG+AGG | - | chr8_3:52379408-52379427 | Msa1294560:CDS | 50.0% | |
| ATTCCTCAGCCTAAAGGTGG+GGG | + | chr8_3:52379906-52379925 | None:intergenic | 50.0% | |
| GATTCCTCAGCCTAAAGGTG+GGG | + | chr8_3:52379907-52379926 | None:intergenic | 50.0% | |
| AGATTGAATGGAGCTGCCTC+TGG | - | chr8_3:52380033-52380052 | Msa1294560:intron | 50.0% | |
| CATAAGCTGGCCAGAGAATG+TGG | - | chr8_3:52380207-52380226 | Msa1294560:intron | 50.0% | |
| GGTGAAGACAGATAGCCACA+TGG | - | chr8_3:52380408-52380427 | Msa1294560:intron | 50.0% | |
| CTGAAGAGAGAAGAAAGGCC+AGG | - | chr8_3:52380479-52380498 | Msa1294560:intron | 50.0% | |
| AGATAATCTCTTGGCCTCCC+TGG | + | chr8_3:52380500-52380519 | None:intergenic | 50.0% | |
| AGGAAGCAGAGGCAACAAAG+TGG | - | chr8_3:52380595-52380614 | Msa1294560:intron | 50.0% | |
| GGAAGCAGAGGCAACAAAGT+GGG | - | chr8_3:52380596-52380615 | Msa1294560:intron | 50.0% | |
| !! | CAAAGTGGGTTTGCTGACGA+TGG | - | chr8_3:52380610-52380629 | Msa1294560:intron | 50.0% |
| !! | AAGGCTTTGGACTTCGAGGA+CGG | - | chr8_3:52380640-52380659 | Msa1294560:intron | 50.0% |
| TTTGGACTTCGAGGACGGAA+AGG | - | chr8_3:52380645-52380664 | Msa1294560:intron | 50.0% | |
| ! | GAAAAGACCTGGAGTGTCTC+CGG | - | chr8_3:52380687-52380706 | Msa1294560:CDS | 50.0% |
| ! | AAAAGACCTGGAGTGTCTCC+GGG | - | chr8_3:52380688-52380707 | Msa1294560:CDS | 50.0% |
| GCTTTGCCTTACCTCCTGAT+CGG | + | chr8_3:52380717-52380736 | None:intergenic | 50.0% | |
| GTAAGGCAAAGCAAGCCCTT+TGG | - | chr8_3:52380725-52380744 | Msa1294560:CDS | 50.0% | |
| ! | GCAAAGCAAGCCCTTTGGAA+AGG | - | chr8_3:52380730-52380749 | Msa1294560:CDS | 50.0% |
| !! | CAGGAATGATGATGGAGCCG+AGG | + | chr8_3:52378729-52378748 | None:intergenic | 55.0% |
| TACCTTCTCCCCCCACCTTT+AGG | - | chr8_3:52379894-52379913 | Msa1294560:intron | 55.0% | |
| TTCCTCAGCCTAAAGGTGGG+GGG | + | chr8_3:52379905-52379924 | None:intergenic | 55.0% | |
| GCTGGCCAGAGAATGTGGAA+TGG | - | chr8_3:52380212-52380231 | Msa1294560:intron | 55.0% | |
| !! | GGCATTGGAGGGTACTAGAC+AGG | - | chr8_3:52380321-52380340 | Msa1294560:intron | 55.0% |
| AGAGAGAAGAAAGGCCAGGG+AGG | - | chr8_3:52380483-52380502 | Msa1294560:intron | 55.0% | |
| TGCTGACGATGGCGCAGATA+AGG | - | chr8_3:52380621-52380640 | Msa1294560:intron | 55.0% | |
| CGATGGCGCAGATAAGGCTT+TGG | - | chr8_3:52380627-52380646 | Msa1294560:intron | 55.0% | |
| !! | AGGACGGAAAGGTGTTCGAG+CGG | - | chr8_3:52380656-52380675 | Msa1294560:intron | 55.0% |
| TTACCTCCTGATCGGTCACC+CGG | + | chr8_3:52380709-52380728 | None:intergenic | 55.0% | |
| !! | CAGGAATGATGATGGAGCCG+AGG | + | chr8_3:52378729-52378748 | None:intergenic | 55.0% |
| TACCTTCTCCCCCCACCTTT+AGG | - | chr8_3:52379894-52379913 | Msa1294560:intron | 55.0% | |
| TTCCTCAGCCTAAAGGTGGG+GGG | + | chr8_3:52379905-52379924 | None:intergenic | 55.0% | |
| GCTGGCCAGAGAATGTGGAA+TGG | - | chr8_3:52380212-52380231 | Msa1294560:intron | 55.0% | |
| !! | GGCATTGGAGGGTACTAGAC+AGG | - | chr8_3:52380321-52380340 | Msa1294560:intron | 55.0% |
| AGAGAGAAGAAAGGCCAGGG+AGG | - | chr8_3:52380483-52380502 | Msa1294560:intron | 55.0% | |
| TGCTGACGATGGCGCAGATA+AGG | - | chr8_3:52380621-52380640 | Msa1294560:intron | 55.0% | |
| CGATGGCGCAGATAAGGCTT+TGG | - | chr8_3:52380627-52380646 | Msa1294560:intron | 55.0% | |
| !! | AGGACGGAAAGGTGTTCGAG+CGG | - | chr8_3:52380656-52380675 | Msa1294560:intron | 55.0% |
| TTACCTCCTGATCGGTCACC+CGG | + | chr8_3:52380709-52380728 | None:intergenic | 55.0% | |
| AGCCTAAAGGTGGGGGGAGA+AGG | + | chr8_3:52379899-52379918 | None:intergenic | 60.0% | |
| GGGTGACCGATCAGGAGGTA+AGG | - | chr8_3:52380708-52380727 | Msa1294560:CDS | 60.0% | |
| AGCCTAAAGGTGGGGGGAGA+AGG | + | chr8_3:52379899-52379918 | None:intergenic | 60.0% | |
| GGGTGACCGATCAGGAGGTA+AGG | - | chr8_3:52380708-52380727 | Msa1294560:CDS | 60.0% | |
| CTCCCCCCACCTTTAGGCTG+AGG | - | chr8_3:52379900-52379919 | Msa1294560:intron | 65.0% | |
| GTGTCTCCGGGTGACCGATC+AGG | - | chr8_3:52380700-52380719 | Msa1294560:CDS | 65.0% | |
| TCTCCGGGTGACCGATCAGG+AGG | - | chr8_3:52380703-52380722 | Msa1294560:CDS | 65.0% | |
| CTCCCCCCACCTTTAGGCTG+AGG | - | chr8_3:52379900-52379919 | Msa1294560:intron | 65.0% | |
| GTGTCTCCGGGTGACCGATC+AGG | - | chr8_3:52380700-52380719 | Msa1294560:CDS | 65.0% | |
| TCTCCGGGTGACCGATCAGG+AGG | - | chr8_3:52380703-52380722 | Msa1294560:CDS | 65.0% | |
| ACCCAGGCGGAGTTCGTCGC+CGG | - | chr8_3:52378798-52378817 | Msa1294560:CDS | 70.0% | |
| CGGTCACCCGGAGACACTCC+AGG | + | chr8_3:52380697-52380716 | None:intergenic | 70.0% | |
| ACCCAGGCGGAGTTCGTCGC+CGG | - | chr8_3:52378798-52378817 | Msa1294560:CDS | 70.0% | |
| CGGTCACCCGGAGACACTCC+AGG | + | chr8_3:52380697-52380716 | None:intergenic | 70.0% | |
| GCCGGCGACGAACTCCGCCT+GGG | + | chr8_3:52378802-52378821 | None:intergenic | 75.0% | |
| AGCCGGCGACGAACTCCGCC+TGG | + | chr8_3:52378803-52378822 | None:intergenic | 75.0% | |
| GCCGGCGACGAACTCCGCCT+GGG | + | chr8_3:52378802-52378821 | None:intergenic | 75.0% | |
| AGCCGGCGACGAACTCCGCC+TGG | + | chr8_3:52378803-52378822 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 52378722 | 52380777 | 52378722 | ID=Msa1294560;Name=Msa1294560 |
| chr8_3 | mRNA | 52378722 | 52380777 | 52378722 | ID=Msa1294560-mRNA-1;Parent=Msa1294560;Name=Msa1294560-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|0|0|2|0|284 |
| chr8_3 | exon | 52380658 | 52380777 | 52380658 | ID=Msa1294560-mRNA-1:exon:14864;Parent=Msa1294560-mRNA-1 |
| chr8_3 | exon | 52378722 | 52379453 | 52378722 | ID=Msa1294560-mRNA-1:exon:14863;Parent=Msa1294560-mRNA-1 |
| chr8_3 | CDS | 52380658 | 52380777 | 52380658 | ID=Msa1294560-mRNA-1:cds;Parent=Msa1294560-mRNA-1 |
| chr8_3 | CDS | 52378722 | 52379453 | 52378722 | ID=Msa1294560-mRNA-1:cds;Parent=Msa1294560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
