AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1300330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300330 MtrunA17_Chr4g0061881 89.574 681 41 5 1 673 1 659 0.0 1210
Msa1300330 MtrunA17_Chr2g0307851 71.293 634 155 4 42 671 59 669 0.0 897
Msa1300330 MtrunA17_Chr4g0073611 50.476 315 110 6 136 445 2 275 2.06e-93 291
Msa1300330 MtrunA17_Chr4g0061841 54.221 308 57 6 135 442 8 231 8.46e-93 287
Msa1300330 MtrunA17_Chr5g0408331 45.257 369 111 7 62 429 34 312 9.45e-90 282
Msa1300330 MtrunA17_Chr5g0437391 48.432 287 97 6 183 466 7 245 6.08e-73 239
Msa1300330 MtrunA17_Chr4g0076561 54.113 231 48 5 330 560 14 186 3.76e-64 210
Msa1300330 MtrunA17_Chr4g0069071 37.500 376 206 9 118 484 7 362 4.91e-64 216
Msa1300330 MtrunA17_Chr8g0344851 54.922 193 60 4 411 603 1 166 1.85e-53 181
Msa1300330 MtrunA17_Chr4g0064001 48.444 225 68 5 436 648 4 192 3.35e-50 174
Msa1300330 MtrunA17_Chr4g0076571 79.592 98 20 0 131 228 1 98 9.01e-50 168
Msa1300330 MtrunA17_Chr4g0061831 62.308 130 27 2 473 602 9 116 1.08e-42 150
Msa1300330 MtrunA17_Chr8g0344821 71.765 85 22 1 519 603 25 107 2.65e-32 120
Msa1300330 MtrunA17_Chr5g0437441 59.048 105 38 3 87 189 1 102 5.87e-30 114
Msa1300330 MtrunA17_Chr8g0344831 54.331 127 45 2 306 432 5 118 5.96e-30 114
Msa1300330 MtrunA17_Chr5g0408341 65.854 82 28 0 552 633 1 82 7.43e-28 109
Msa1300330 MtrunA17_Chr4g0073621 78.788 66 12 1 547 610 1 66 5.14e-27 104
Msa1300330 MtrunA17_Chr5g0437451 64.198 81 21 2 527 599 68 148 3.91e-23 96.3
Msa1300330 MtrunA17_Chr4g0069081 48.837 86 44 0 528 613 2 87 1.79e-19 84.3
Msa1300330 MtrunA17_Chr4g0063991 56.471 85 25 2 327 411 1 73 3.46e-19 82.4
Msa1300330 MtrunA17_Chr4g0061851 57.000 100 29 4 19 109 1 95 2.10e-15 72.4
Msa1300330 MtrunA17_Chr4g0063981 50.000 72 24 3 165 235 1 61 7.95e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300330 AT1G73990.1 64.658 614 194 3 58 671 85 675 0.0 823
Msa1300330 AT1G73990.2 63.211 492 158 3 58 549 85 553 0.0 647

Find 207 sgRNAs with CRISPR-Local

Find 653 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAAATTATCGCAAATT+TGG 0.081912 8_3:+61858031 None:intergenic
TTCTCTATCTAATACGTATT+TGG 0.128210 8_3:-61849730 Msa1300330:three_prime_UTR
TGGAATCATGTTTCAGAAAT+TGG 0.170138 8_3:-61849937 Msa1300330:CDS
AACTGCCTGTGGTTGATTTC+AGG 0.182093 8_3:-61855009 Msa1300330:intron
GCTTATGATCCTCGTATTTC+TGG 0.189068 8_3:-61858003 Msa1300330:CDS
CAGCAACGGAGTCCGGTTTA+AGG 0.202211 8_3:+61858336 None:intergenic
TCCATCTGCTAACCCCATTT+TGG 0.211928 8_3:-61849907 Msa1300330:CDS
CAACAAATTATCGCAAATTT+GGG 0.225749 8_3:+61858032 None:intergenic
ATCTTTCATCAATGCCAAAA+TGG 0.241993 8_3:+61849893 None:intergenic
GCAGAAAGTCTTACCTTAAC+TGG 0.282389 8_3:-61852352 Msa1300330:CDS
AGATCTGTCTTCGAATTTCA+TGG 0.292976 8_3:+61857935 None:intergenic
TGGATAATATCTATTCAAAT+TGG 0.293252 8_3:-61856645 Msa1300330:CDS
CATCATAGAGTATGCTTGTT+AGG 0.295569 8_3:+61856445 None:intergenic
GGGAAGAGATAACCCCTTCT+TGG 0.300335 8_3:+61858053 None:intergenic
AATACTCTGGAGTTAGAAAA+TGG 0.307647 8_3:-61853693 Msa1300330:CDS
GCCCCTAGCAAAGGTGTTAT+TGG 0.308519 8_3:-61853586 Msa1300330:CDS
CATGGTTTGGTTGATGCTAT+TGG 0.308966 8_3:-61850272 Msa1300330:CDS
TGAGATGCTGACTGCATTAC+TGG 0.310571 8_3:-61856665 Msa1300330:CDS
GATTGAAAGGCATGAGTAAT+TGG 0.311311 8_3:+61858431 None:intergenic
AAATGGACTGTTGGAATATC+AGG 0.318883 8_3:-61853676 Msa1300330:CDS
CCTTTGCTAGGGGCACTAAA+TGG 0.322892 8_3:+61853595 None:intergenic
CAAGATACTCCGCTCTTGTT+TGG 0.335632 8_3:-61849627 Msa1300330:three_prime_UTR
GGACCAATTGTTAATAGTTC+CGG 0.351716 8_3:-61858535 Msa1300330:five_prime_UTR
ATCTTAAATTTCAGAAAATC+AGG 0.356136 8_3:-61857916 Msa1300330:intron
CTTAAACCGGACTCCGTTGC+TGG 0.357136 8_3:-61858335 Msa1300330:CDS
AGGTTGCACAGGGGAGGGTT+TGG 0.365062 8_3:-61850316 Msa1300330:CDS
AATAGGAAGAAGAGTGGAAA+TGG 0.367287 8_3:+61858363 None:intergenic
TTCAGAGTCAAATAAATTCA+AGG 0.368873 8_3:-61852858 Msa1300330:intron
CACCTCCTGGACTGTCAATT+CGG 0.377062 8_3:+61852825 None:intergenic
CTGTTTGACTGTTGCCTCCC+AGG 0.379271 8_3:-61849528 Msa1300330:three_prime_UTR
ATGGGATGCTGCATCCTTAC+CGG 0.380175 8_3:+61850292 None:intergenic
CTTACCTTAACTGGTTCAAT+TGG 0.381447 8_3:-61852343 Msa1300330:CDS
TCTTTCATCAATGCCAAAAT+GGG 0.384909 8_3:+61849894 None:intergenic
GTGGAGAGAAATCAGGCTTC+TGG 0.386046 8_3:-61852461 Msa1300330:CDS
GAGAAAGGAGCGGTGGCGTT+GGG 0.391690 8_3:+61858409 None:intergenic
TCCGCCACGTCGCCGTTTAG+TGG 0.399353 8_3:+61858563 None:intergenic
TTGTAGGAAAATTTAGCCTT+GGG 0.403024 8_3:-61851762 Msa1300330:intron
AGTTCGATGGCAACATGCCC+TGG 0.408337 8_3:+61849510 None:intergenic
TTCCTATTCTACCCTTAAAC+CGG 0.410999 8_3:-61858348 Msa1300330:CDS
CACTCCAATTGAACCAGTTA+AGG 0.411932 8_3:+61852339 None:intergenic
AAGCGGTCTTGGTAATTCTC+TGG 0.416681 8_3:-61850033 Msa1300330:CDS
AAATGGAAGGGTATGGGAAT+GGG 0.426328 8_3:+61858380 None:intergenic
ATAGCCGTCATCCGAGCCTC+AGG 0.428857 8_3:-61853640 Msa1300330:CDS
TGACAGTTTAAATTGTGGTT+GGG 0.429324 8_3:-61857965 Msa1300330:CDS
ACCAAGACCGCTTAAAATCT+CGG 0.429562 8_3:+61850043 None:intergenic
GACTCCGTTGCTGGTGGCCG+TGG 0.430106 8_3:-61858326 Msa1300330:CDS
CCTCTCTGCACACAATCATT+AGG 0.430468 8_3:+61849576 None:intergenic
GAAGCAAGAGCATCACCTCC+TGG 0.433755 8_3:+61852812 None:intergenic
AGCAACGGAGTCCGGTTTAA+GGG 0.433765 8_3:+61858337 None:intergenic
GGGAAACTTTACGAGAAGAT+TGG 0.434573 8_3:-61851742 Msa1300330:CDS
TTATAAACAATTTCGAGATA+AGG 0.435239 8_3:-61850465 Msa1300330:CDS
TTTGTAGGAAAATTTAGCCT+TGG 0.443359 8_3:-61851763 Msa1300330:intron
TAAGTTGAAGGAGAGACTTC+AGG 0.449062 8_3:-61855047 Msa1300330:CDS
GCGCCGGAACTATTAACAAT+TGG 0.450089 8_3:+61858532 None:intergenic
AAAACATACAGTCATTGATC+TGG 0.450690 8_3:+61850433 None:intergenic
TTGACAGTTTAAATTGTGGT+TGG 0.454515 8_3:-61857966 Msa1300330:CDS
GGATGCAGCATCCCATGGTT+TGG 0.455460 8_3:-61850285 Msa1300330:CDS
CGGCCACCAGCAACGGAGTC+CGG 0.456250 8_3:+61858329 None:intergenic
AGAGAAAGGAGCGGTGGCGT+TGG 0.458199 8_3:+61858408 None:intergenic
GCAGGTTATCACTAAGTTGA+AGG 0.459119 8_3:-61855059 Msa1300330:intron
CAACGTTTGGTTCAATTCCA+AGG 0.460442 8_3:+61856755 None:intergenic
GGGAATGGGATGAGAGAGAA+AGG 0.465911 8_3:+61858394 None:intergenic
TCAACAAAGAAATTATATCA+AGG 0.467820 8_3:-61851717 Msa1300330:CDS
TACTACATGGCAATGGGAGC+AGG 0.473921 8_3:-61852385 Msa1300330:CDS
TGTTTGACTGTTGCCTCCCA+GGG 0.478662 8_3:-61849527 Msa1300330:three_prime_UTR
GGAGTTAGAAAATGGACTGT+TGG 0.480337 8_3:-61853685 Msa1300330:CDS
GACTAGAAATTTGTTGAAGC+CGG 0.482061 8_3:+61858259 None:intergenic
GAAATGGAAGGGTATGGGAA+TGG 0.482306 8_3:+61858379 None:intergenic
TTGAGAAATTTGTATTCTGA+AGG 0.482578 8_3:-61849689 Msa1300330:three_prime_UTR
TCACACTACATAGATGTTGT+TGG 0.486828 8_3:+61849471 None:intergenic
TCTCCAATAACACCTTTGCT+AGG 0.488100 8_3:+61853583 None:intergenic
TAATATCTATTCAAATTGGC+TGG 0.489466 8_3:-61856641 Msa1300330:CDS
CTTAAAATCTCGGGTAGAGA+AGG 0.489854 8_3:+61850053 None:intergenic
ACAGAATGTGGAGAGAAATC+AGG 0.489933 8_3:-61852468 Msa1300330:intron
CTCAAATACAGAAAATACTC+TGG 0.496655 8_3:-61853706 Msa1300330:intron
CTCCAATAACACCTTTGCTA+GGG 0.498463 8_3:+61853584 None:intergenic
GCCAAAATGGGGTTAGCAGA+TGG 0.499225 8_3:+61849906 None:intergenic
CAACAAAGAAATTATATCAA+GGG 0.502630 8_3:-61851716 Msa1300330:CDS
ATTGAGAACTTCATAAATGA+AGG 0.504321 8_3:-61856504 Msa1300330:CDS
CAAATTGACAGTTTAAATTG+TGG 0.507125 8_3:-61857970 Msa1300330:CDS
GAGAAATTAGATTTCTCAGT+GGG 0.507425 8_3:+61849748 None:intergenic
GGAAGAGGTTGCACAGGGGA+GGG 0.508226 8_3:-61850321 Msa1300330:CDS
AATAATAGATTCTCCAAGAA+GGG 0.508355 8_3:-61858066 Msa1300330:CDS
GTTATTGAGTGTGATGATAG+TGG 0.509342 8_3:-61851182 Msa1300330:CDS
TTTGGTAAATATAAAAGTGC+AGG 0.511523 8_3:-61856727 Msa1300330:CDS
AGAGTGGAAATGGAAGGGTA+TGG 0.511943 8_3:+61858373 None:intergenic
CCGTGTTGAACACGCTCCCA+TGG 0.512843 8_3:+61858212 None:intergenic
GGAGTTCAAGCGCGAATGGA+TGG 0.514572 8_3:-61849957 Msa1300330:CDS
CAAGATGGAAGAGGTTGCAC+AGG 0.515973 8_3:-61850327 Msa1300330:CDS
TGATGGAGTTCAAGCGCGAA+TGG 0.526317 8_3:-61849961 Msa1300330:CDS
AATTTGTTGAAGCCGGTGAC+CGG 0.528532 8_3:+61858266 None:intergenic
GTCCGGTTTAAGGGTAGAAT+AGG 0.528731 8_3:+61858346 None:intergenic
ATCATGTTTCAGAAATTGGA+AGG 0.534579 8_3:-61849933 Msa1300330:CDS
GGAGGATACTACATGGCAAT+GGG 0.534794 8_3:-61852391 Msa1300330:CDS
CCAAGACCGCTTAAAATCTC+GGG 0.535260 8_3:+61850044 None:intergenic
GGTTCAATTGGAGTGGTCAC+AGG 0.536881 8_3:-61852331 Msa1300330:intron
GACGAATGGTCCCTGAGGCT+CGG 0.537599 8_3:+61853629 None:intergenic
GTTCAAGCGGCATTTGTCAA+AGG 0.539318 8_3:-61857107 Msa1300330:intron
GAGTGGAAATGGAAGGGTAT+GGG 0.540339 8_3:+61858374 None:intergenic
TGGAAGAGGTTGCACAGGGG+AGG 0.540501 8_3:-61850322 Msa1300330:CDS
GGAAGAAGAGTGGAAATGGA+AGG 0.540770 8_3:+61858367 None:intergenic
GGGTAGAATAGGAAGAAGAG+TGG 0.542815 8_3:+61858357 None:intergenic
ATGATTGTGTGCAGAGAGGA+GGG 0.546751 8_3:-61849572 Msa1300330:three_prime_UTR
AACAAAGAAATTATATCAAG+GGG 0.548251 8_3:-61851715 Msa1300330:intron
ATGTCCGATGTGGCAGCAAG+TGG 0.548551 8_3:-61852412 Msa1300330:CDS
ATCGCCACGGCCACCAGCAA+CGG 0.551255 8_3:+61858322 None:intergenic
CTTAACTGGTTCAATTGGAG+TGG 0.555659 8_3:-61852338 Msa1300330:CDS
GGGGAGGGTTTGGACCGGTA+AGG 0.556238 8_3:-61850306 Msa1300330:CDS
GGTTTGGTTGATGCTATTGG+TGG 0.557324 8_3:-61850269 Msa1300330:CDS
AAATGCTAATAGCATTCCCA+TGG 0.557417 8_3:-61858229 Msa1300330:CDS
TGGTAATTCTCTGGTTGGAG+TGG 0.563874 8_3:-61850024 Msa1300330:CDS
CGTGTTGAACACGCTCCCAT+GGG 0.563972 8_3:+61858213 None:intergenic
GGTCTTGGTAATTCTCTGGT+TGG 0.566142 8_3:-61850029 Msa1300330:CDS
TGGAGGATACTACATGGCAA+TGG 0.566417 8_3:-61852392 Msa1300330:CDS
TTGGAGGTGAGATGATGTAA+CGG 0.566551 8_3:+61858450 None:intergenic
TAATATACCTCAAGACAGAC+AGG 0.566826 8_3:-61850210 Msa1300330:intron
TCTATGCCAGGTTACTGTTG+TGG 0.567041 8_3:-61850093 Msa1300330:intron
GCGGTGGCGTTGGGATTGAA+AGG 0.567212 8_3:+61858418 None:intergenic
TGTTGTTGGTCATCACTAAG+AGG 0.567900 8_3:+61849485 None:intergenic
CACACTCAATAACTCGATTG+AGG 0.571491 8_3:+61851192 None:intergenic
GAATAATAGATTCTCCAAGA+AGG 0.575000 8_3:-61858067 Msa1300330:CDS
GTTCGATGGCAACATGCCCT+GGG 0.576422 8_3:+61849511 None:intergenic
GCAAATAGCTCTGCTTCATG+TGG 0.579074 8_3:+61850506 None:intergenic
CCATTTAGTGCCCCTAGCAA+AGG 0.580681 8_3:-61853595 Msa1300330:CDS
TCGGACATTGAAGAAATGAC+TGG 0.581755 8_3:+61852427 None:intergenic
AAATCAACCTGTCTGTCTTG+AGG 0.582376 8_3:+61850203 None:intergenic
TCCGATGTGGCAGCAAGTGG+AGG 0.582580 8_3:-61852409 Msa1300330:CDS
CGGCTTAAAATCAAAGTCAC+CGG 0.582769 8_3:+61858286 None:intergenic
ACCACTAAACGGCGACGTGG+CGG 0.583824 8_3:-61858564 Msa1300330:five_prime_UTR
GGGACCATTCGTCGTACTGA+GGG 0.584298 8_3:-61853619 Msa1300330:CDS
AATGATTGTGTGCAGAGAGG+AGG 0.584535 8_3:-61849573 Msa1300330:three_prime_UTR
TCCAATAACACCTTTGCTAG+GGG 0.584566 8_3:+61853585 None:intergenic
GGCGATGAAAATTATCCCAC+CGG 0.584984 8_3:-61858305 Msa1300330:CDS
CTAGGTAGACAAGATGGAAG+AGG 0.585397 8_3:-61850336 Msa1300330:intron
GTTTGGATTCAGCGTTCAAG+CGG 0.585908 8_3:-61857120 Msa1300330:CDS
TTTCCGTCGATAATACTACA+TGG 0.589181 8_3:+61858504 None:intergenic
AACTCACGTGGAATCCACAC+TGG 0.589784 8_3:+61851152 None:intergenic
GTTTGGTTGATGCTATTGGT+GGG 0.590597 8_3:-61850268 Msa1300330:CDS
CTCACGGTGATCTTCAGACA+TGG 0.591359 8_3:+61856684 None:intergenic
TAAACAATTTCGAGATAAGG+CGG 0.591394 8_3:-61850462 Msa1300330:CDS
GTAACGGAAGCGGTGGATTG+CGG 0.592175 8_3:+61858466 None:intergenic
GCACAGGGGAGGGTTTGGAC+CGG 0.592535 8_3:-61850311 Msa1300330:CDS
GAAGAAGAGTGGAAATGGAA+GGG 0.593313 8_3:+61858368 None:intergenic
GGTCCCTGAGGCTCGGATGA+CGG 0.593385 8_3:+61853636 None:intergenic
GTGAGATGATGTAACGGAAG+CGG 0.593510 8_3:+61858456 None:intergenic
AAATGTAAATGCACCTCTGG+CGG 0.595299 8_3:+61856606 None:intergenic
ATTATCCGAATTGACAGTCC+AGG 0.599804 8_3:-61852830 Msa1300330:CDS
GCTCTTGTTTGGATTCACGT+TGG 0.599979 8_3:-61849616 Msa1300330:three_prime_UTR
CCGTTGCTAGGTAGACAAGA+TGG 0.600866 8_3:-61850342 Msa1300330:intron
GAGAAGATCCGTAGGGTCAG+AGG 0.601358 8_3:-61853550 Msa1300330:intron
GTTCTACTACATAGAGAGAG+GGG 0.601611 8_3:-61849863 Msa1300330:exon
CTTAAAATCAAAGTCACCGG+TGG 0.602820 8_3:+61858289 None:intergenic
AGGGACCATTCGTCGTACTG+AGG 0.602830 8_3:-61853620 Msa1300330:CDS
TGAAAGGCATGAGTAATTGG+AGG 0.603611 8_3:+61858434 None:intergenic
TAAGTGTACCTCTGACCCTA+CGG 0.605579 8_3:+61853542 None:intergenic
GTAGACAGACTGAAAGAAGA+GGG 0.607381 8_3:-61856471 Msa1300330:CDS
AAGATGGAAGAGGTTGCACA+GGG 0.610115 8_3:-61850326 Msa1300330:CDS
AAACCGGACTCCGTTGCTGG+TGG 0.610899 8_3:-61858332 Msa1300330:CDS
AACACTCAAGGAACTACTAG+AGG 0.611061 8_3:-61849997 Msa1300330:CDS
GCTTGTAGGAAAATTTGTTG+TGG 0.612642 8_3:-61857231 Msa1300330:intron
AGATGATGTAACGGAAGCGG+TGG 0.613723 8_3:+61858459 None:intergenic
GGTAAGGATGCAGCATCCCA+TGG 0.615400 8_3:-61850290 Msa1300330:CDS
CAGTTCTACTACATAGAGAG+AGG 0.616297 8_3:-61849865 Msa1300330:exon
TTCTCAACATTATGACAACA+TGG 0.616510 8_3:+61849705 None:intergenic
TCCTCCACTTGCTGCCACAT+CGG 0.617353 8_3:+61852408 None:intergenic
AAACCATGTAGTATTATCGA+CGG 0.619274 8_3:-61858507 Msa1300330:five_prime_UTR
TGGAGTGGACGAAACACTCA+AGG 0.619380 8_3:-61850009 Msa1300330:CDS
TGGACCCTCAGTACGACGAA+TGG 0.619771 8_3:+61853615 None:intergenic
CAATAGCATCAACCAAACCA+TGG 0.619929 8_3:+61850273 None:intergenic
AGTAGACAGACTGAAAGAAG+AGG 0.620390 8_3:-61856472 Msa1300330:CDS
AGTTCATTGAGAAGATCCGT+AGG 0.622768 8_3:-61853558 Msa1300330:CDS
CTTTCATCAATGCCAAAATG+GGG 0.626220 8_3:+61849895 None:intergenic
AGTTCTACTACATAGAGAGA+GGG 0.626664 8_3:-61849864 Msa1300330:exon
TCTTCTCGTAAAGTTTCCCA+AGG 0.632726 8_3:+61851746 None:intergenic
TAGCCGTCATCCGAGCCTCA+GGG 0.632988 8_3:-61853639 Msa1300330:CDS
ATAATAGATTCTCCAAGAAG+GGG 0.633398 8_3:-61858065 Msa1300330:CDS
AAGCATACTCTATGATGATG+AGG 0.637737 8_3:-61856439 Msa1300330:intron
CATTTCTTCAATGTCCGATG+TGG 0.637870 8_3:-61852422 Msa1300330:CDS
AGCAAGTGGAGGATACTACA+TGG 0.638303 8_3:-61852398 Msa1300330:CDS
AATAGCATCAACCAAACCAT+GGG 0.640815 8_3:+61850274 None:intergenic
TGGGATGAGAGAGAAAGGAG+CGG 0.643232 8_3:+61858399 None:intergenic
CCATGGGAGCGTGTTCAACA+CGG 0.643463 8_3:-61858212 Msa1300330:CDS
GATACAGTATCTTCCGCCAG+AGG 0.646358 8_3:-61856619 Msa1300330:intron
TTAAAATCAAAGTCACCGGT+GGG 0.648102 8_3:+61858290 None:intergenic
TGGACTGTTGGAATATCAGG+TGG 0.648693 8_3:-61853673 Msa1300330:CDS
ATTTACCTGAAATCAACCAC+AGG 0.649207 8_3:+61855004 None:intergenic
AACAAATTATCGCAAATTTG+GGG 0.650663 8_3:+61858033 None:intergenic
CTCTCTATGTAGTAGAACTG+AGG 0.653257 8_3:+61849868 None:intergenic
TCACTAAGAGGAGAGTTCGA+TGG 0.657646 8_3:+61849497 None:intergenic
GTAATGCAGTCAGCATCTCA+CGG 0.662724 8_3:+61856668 None:intergenic
ATAATAATAGAAGATCTACA+TGG 0.663483 8_3:-61849820 Msa1300330:three_prime_UTR
TTCTACTACATAGAGAGAGG+GGG 0.667114 8_3:-61849862 Msa1300330:exon
AAAACCACTAAACGGCGACG+TGG 0.668454 8_3:-61858567 Msa1300330:five_prime_UTR
CGATGGCAACATGCCCTGGG+AGG 0.670787 8_3:+61849514 None:intergenic
CCTAATGATTGTGTGCAGAG+AGG 0.676894 8_3:-61849576 Msa1300330:three_prime_UTR
GTTCATTGAGAAGATCCGTA+GGG 0.678464 8_3:-61853557 Msa1300330:CDS
GATGAGAGAGAAAGGAGCGG+TGG 0.679758 8_3:+61858402 None:intergenic
AATGCTAATAGCATTCCCAT+GGG 0.683801 8_3:-61858228 Msa1300330:CDS
ATCCGAATTGACAGTCCAGG+AGG 0.693844 8_3:-61852827 Msa1300330:CDS
AACGTGAATCCAAACAAGAG+CGG 0.696169 8_3:+61849618 None:intergenic
TGATTGTGTGCAGAGAGGAG+GGG 0.697965 8_3:-61849571 Msa1300330:three_prime_UTR
AGAGAAATTAGATTTCTCAG+TGG 0.698526 8_3:+61849747 None:intergenic
ATCTCGGGTAGAGAAGGACG+AGG 0.713076 8_3:+61850059 None:intergenic
ATAGTGGATAAAATCCAGTG+TGG 0.746247 8_3:-61851166 Msa1300330:CDS
AGTACGACGAATGGTCCCTG+AGG 0.759893 8_3:+61853624 None:intergenic
AGATACACACCAGAAATACG+AGG 0.767284 8_3:+61857994 None:intergenic
AGATGGAAGAGGTTGCACAG+GGG 0.806994 8_3:-61850325 Msa1300330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTTTTTTTAAAA+AGG + chr8_3:61851809-61851828 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr8_3:61853123-61853142 Msa1300330:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr8_3:61853124-61853143 Msa1300330:intron 0.0%
!! TATATATATATATATATATA+GGG + chr8_3:61853123-61853142 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr8_3:61853124-61853143 None:intergenic 0.0%
!! TTTAAAAAAAAAAAAAAAAA+AGG + chr8_3:61854809-61854828 None:intergenic 0.0%
!!! TTTTATTTTACATTTTCTTT+TGG - chr8_3:61851092-61851111 Msa1300330:intron 10.0%
!! TAAGTTCATTTATTTATTTA+AGG + chr8_3:61851472-61851491 None:intergenic 10.0%
!! TAAATAAATAAATGAACTTA+TGG - chr8_3:61851472-61851491 Msa1300330:intron 10.0%
!! AAATAAATAAATGAACTTAT+GGG - chr8_3:61851473-61851492 Msa1300330:intron 10.0%
!!! CATATTTTAATATATAAAAC+TGG + chr8_3:61854273-61854292 None:intergenic 10.0%
!!! TTTATATTTGTTAAAATCAA+GGG + chr8_3:61854736-61854755 None:intergenic 10.0%
!!! TTTTATATTTGTTAAAATCA+AGG + chr8_3:61854737-61854756 None:intergenic 10.0%
!!! TTGATTTTAACAAATATAAA+AGG - chr8_3:61854736-61854755 Msa1300330:intron 10.0%
!!! GAAAAATGATTTTAAATGTA+GGG - chr8_3:61851114-61851133 Msa1300330:intron 15.0%
!!! TATTTATTTAAGGTACAAAT+AGG + chr8_3:61851462-61851481 None:intergenic 15.0%
!! ATAAATAGAAAGAGAAAATT+AGG - chr8_3:61851825-61851844 Msa1300330:intron 15.0%
!! AATAATAATCATGGTATTAT+TGG - chr8_3:61851866-61851885 Msa1300330:intron 15.0%
!! TAGAAATATCATTAAGTATA+AGG - chr8_3:61852751-61852770 Msa1300330:intron 15.0%
!! CTGAATTACAATATTAAATT+TGG - chr8_3:61852823-61852842 Msa1300330:CDS 15.0%
!! TATATATATATATCCTTAGT+TGG - chr8_3:61854022-61854041 Msa1300330:intron 15.0%
!!! ATAGTTATGTTATTTGATTT+TGG + chr8_3:61854119-61854138 None:intergenic 15.0%
!!! GAACTAAAAGTTTATTTTAT+AGG - chr8_3:61855037-61855056 Msa1300330:CDS 15.0%
!!! AATATTTTTGACATAAAACT+CGG + chr8_3:61856034-61856053 None:intergenic 15.0%
!! AGAATATACAATAGAATATA+AGG + chr8_3:61856212-61856231 None:intergenic 15.0%
!! ATATAAAACATGAAAAAGAT+TGG + chr8_3:61857343-61857362 None:intergenic 15.0%
!! ATCTTAAATTTCAGAAAATC+AGG - chr8_3:61850121-61850140 Msa1300330:intron 20.0%
!! TAGTAGATTAAGAAGAAATT+GGG + chr8_3:61850176-61850195 None:intergenic 20.0%
!!! GGAAAAATGATTTTAAATGT+AGG - chr8_3:61851113-61851132 Msa1300330:intron 20.0%
!! AAACATCAACAAGTTTAAAA+GGG + chr8_3:61851214-61851233 None:intergenic 20.0%
!! TAAACATCAACAAGTTTAAA+AGG + chr8_3:61851215-61851234 None:intergenic 20.0%
!! TGGATAATATCTATTCAAAT+TGG - chr8_3:61851392-61851411 Msa1300330:intron 20.0%
!!! TTATAGGGTTTTAGATTTAT+TGG - chr8_3:61851995-61852014 Msa1300330:intron 20.0%
!!! TATAGGGTTTTAGATTTATT+GGG - chr8_3:61851996-61852015 Msa1300330:intron 20.0%
!! ATCATGAATATAAGAAAATG+TGG - chr8_3:61852174-61852193 Msa1300330:intron 20.0%
!!! TTCTCATTTTGTTTCATTTT+GGG + chr8_3:61852522-61852541 None:intergenic 20.0%
!!! ATTCTCATTTTGTTTCATTT+TGG + chr8_3:61852523-61852542 None:intergenic 20.0%
!! TTAATTATATATACACGAGT+GGG + chr8_3:61852879-61852898 None:intergenic 20.0%
!! ATTAATTATATATACACGAG+TGG + chr8_3:61852880-61852899 None:intergenic 20.0%
!! CGTGTATATATAATTAATAC+TGG - chr8_3:61852882-61852901 Msa1300330:intron 20.0%
!! TCAATTAATCCATGATTATT+TGG - chr8_3:61853610-61853629 Msa1300330:CDS 20.0%
!!! GAACAGTTTTTATTTAAAAC+AGG + chr8_3:61854186-61854205 None:intergenic 20.0%
!! AAATAAAAACTGTTCTAACT+AGG - chr8_3:61854191-61854210 Msa1300330:intron 20.0%
!! TTTATGCTTAATGAGTTATT+TGG + chr8_3:61854296-61854315 None:intergenic 20.0%
!!! ATTATCTGCTTTGAAATTTA+AGG + chr8_3:61854541-61854560 None:intergenic 20.0%
!!! AAAGTTTTTAGAACTAAAAC+AGG - chr8_3:61854826-61854845 Msa1300330:intron 20.0%
!!! AAGTTTTTAGAACTAAAACA+GGG - chr8_3:61854827-61854846 Msa1300330:intron 20.0%
!! AAATTTATTTACACTGGAAT+TGG + chr8_3:61854965-61854984 None:intergenic 20.0%
!!! CAGTGTAAATAAATTTTGTA+GGG - chr8_3:61854969-61854988 Msa1300330:intron 20.0%
!!! AATATACAACTTTTTGCTTA+TGG + chr8_3:61855013-61855032 None:intergenic 20.0%
!!! GCACATTTAAATGTAATTTT+TGG + chr8_3:61855094-61855113 None:intergenic 20.0%
!! TTAATAAAACGTGCAATAAA+TGG - chr8_3:61855298-61855317 Msa1300330:intron 20.0%
!! CAAATTTAATTAGACCATAA+AGG + chr8_3:61855450-61855469 None:intergenic 20.0%
!! ATACTAATTGCTAACTATTT+GGG - chr8_3:61855503-61855522 Msa1300330:intron 20.0%
!! AAATTAAGCAAATACCATAT+AGG + chr8_3:61855874-61855893 None:intergenic 20.0%
!!! AGTTTGAAATATCATTTGAA+TGG - chr8_3:61856085-61856104 Msa1300330:intron 20.0%
!! TACAATAGAATATAAGGAAA+TGG + chr8_3:61856206-61856225 None:intergenic 20.0%
!! TTAATAGATTATAAAACCCA+AGG + chr8_3:61856235-61856254 None:intergenic 20.0%
!! TCAACAAAGAAATTATATCA+AGG - chr8_3:61856320-61856339 Msa1300330:intron 20.0%
!! CAACAAAGAAATTATATCAA+GGG - chr8_3:61856321-61856340 Msa1300330:intron 20.0%
!! AACAAAGAAATTATATCAAG+GGG - chr8_3:61856322-61856341 Msa1300330:intron 20.0%
!! TTTATTCATTAAGATTCTAG+AGG - chr8_3:61856404-61856423 Msa1300330:intron 20.0%
!! TTATTCATTAAGATTCTAGA+GGG - chr8_3:61856405-61856424 Msa1300330:intron 20.0%
!! CTAGAATCTTAATGAATAAA+GGG + chr8_3:61856404-61856423 None:intergenic 20.0%
!!! TCTAGAATCTTAATGAATAA+AGG + chr8_3:61856405-61856424 None:intergenic 20.0%
!!! ATTCCTTATTTTTTGAATTC+AGG - chr8_3:61856808-61856827 Msa1300330:intron 20.0%
!! AAACCTGAATTCAAAAAATA+AGG + chr8_3:61856814-61856833 None:intergenic 20.0%
!!! ATTTTTTGAATTCAGGTTTT+AGG - chr8_3:61856815-61856834 Msa1300330:intron 20.0%
!!! GTAGATTTTATTTTGATCTT+TGG - chr8_3:61857072-61857091 Msa1300330:intron 20.0%
!!! TGTTTTATAGTTGTGATATT+TGG - chr8_3:61857196-61857215 Msa1300330:CDS 20.0%
!! AAATCATAAATCAGAGAAAA+AGG + chr8_3:61857388-61857407 None:intergenic 20.0%
!! ATCAAAAATATAAACTGATG+CGG + chr8_3:61857461-61857480 None:intergenic 20.0%
!!! GTTTATATTTTTGATTTCCA+AGG - chr8_3:61857466-61857485 Msa1300330:intron 20.0%
!! TTATAAACAATTTCGAGATA+AGG - chr8_3:61857572-61857591 Msa1300330:intron 20.0%
!! ATAATAATAGAAGATCTACA+TGG - chr8_3:61858217-61858236 Msa1300330:CDS 20.0%
!!! AAAAAACTTTATTTGTGTAG+AGG + chr8_3:61858389-61858408 None:intergenic 20.0%
! AATAATAGATTCTCCAAGAA+GGG - chr8_3:61849971-61849990 Msa1300330:CDS 25.0%
! AACAAATTATCGCAAATTTG+GGG + chr8_3:61850007-61850026 None:intergenic 25.0%
! CAACAAATTATCGCAAATTT+GGG + chr8_3:61850008-61850027 None:intergenic 25.0%
! TCAACAAATTATCGCAAATT+TGG + chr8_3:61850009-61850028 None:intergenic 25.0%
! CAAATTGACAGTTTAAATTG+TGG - chr8_3:61850067-61850086 Msa1300330:CDS 25.0%
! TAAATTTCAGAAAATCAGGT+AGG - chr8_3:61850125-61850144 Msa1300330:intron 25.0%
! CTAGTAGATTAAGAAGAAAT+TGG + chr8_3:61850177-61850196 None:intergenic 25.0%
! CTTAATCTACTAGTGTTTAA+TGG - chr8_3:61850184-61850203 Msa1300330:intron 25.0%
! AAGTTATAAACTAGTGAGAA+AGG + chr8_3:61850306-61850325 None:intergenic 25.0%
! TTACCAAACAAAATCTAAGA+AGG - chr8_3:61850508-61850527 Msa1300330:CDS 25.0%
!! ATACCTTCTTAGATTTTGTT+TGG + chr8_3:61850514-61850533 None:intergenic 25.0%
! AACAAAGAAAAATAAGCACT+CGG + chr8_3:61850900-61850919 None:intergenic 25.0%
!!! AGTGCTTATTTTTCTTTGTT+TGG - chr8_3:61850900-61850919 Msa1300330:intron 25.0%
!!! ACAAAGTTTGACTTTTAGTA+TGG - chr8_3:61850987-61851006 Msa1300330:intron 25.0%
!! ACTTGTTGATGTTTATACTT+AGG - chr8_3:61851220-61851239 Msa1300330:intron 25.0%
!!! TTACCAAATTTTTCAACGTT+TGG + chr8_3:61851298-61851317 None:intergenic 25.0%
!! TTTGGTAAATATAAAAGTGC+AGG - chr8_3:61851310-61851329 Msa1300330:intron 25.0%
! TAATATCTATTCAAATTGGC+TGG - chr8_3:61851396-61851415 Msa1300330:intron 25.0%
! ATTGAGAACTTCATAAATGA+AGG - chr8_3:61851533-61851552 Msa1300330:intron 25.0%
! TAGAAAGAGAAAATTAGGTA+AGG - chr8_3:61851830-61851849 Msa1300330:intron 25.0%
! AGAAAGAGAAAATTAGGTAA+GGG - chr8_3:61851831-61851850 Msa1300330:intron 25.0%
! TAAAACCCTATAATTTCATC+AGG + chr8_3:61851988-61852007 None:intergenic 25.0%
!!! ATAGGGTTTTAGATTTATTG+GGG - chr8_3:61851997-61852016 Msa1300330:intron 25.0%
! TTTACTTGATGAGAATGTAT+TGG - chr8_3:61852067-61852086 Msa1300330:intron 25.0%
! AATCTAGTACAAGTCTAATT+GGG + chr8_3:61852121-61852140 None:intergenic 25.0%
! AAATCTAGTACAAGTCTAAT+TGG + chr8_3:61852122-61852141 None:intergenic 25.0%
!! AGTAATAGATTTTGTTGGAA+CGG - chr8_3:61852390-61852409 Msa1300330:CDS 25.0%
!! TTATAGTTATGTTACTTGCA+AGG + chr8_3:61852432-61852451 None:intergenic 25.0%
! AACTCATCAAGAATAACATT+TGG - chr8_3:61852466-61852485 Msa1300330:CDS 25.0%
! GTCTTGTACAAGTATAAATA+GGG + chr8_3:61852714-61852733 None:intergenic 25.0%
!! AGTCTTGTACAAGTATAAAT+AGG + chr8_3:61852715-61852734 None:intergenic 25.0%
! AAATGAGGATTAAGACTAAA+AGG - chr8_3:61852933-61852952 Msa1300330:intron 25.0%
!! AGAAACATAAAATGTTTTGC+AGG - chr8_3:61852960-61852979 Msa1300330:intron 25.0%
! AAATTTACCATTCTTTGAGT+AGG - chr8_3:61853052-61853071 Msa1300330:intron 25.0%
! TTCATTTCTACTATATGCAA+TGG + chr8_3:61853323-61853342 None:intergenic 25.0%
! TTGTAGAGATTGATATAGAA+AGG + chr8_3:61853379-61853398 None:intergenic 25.0%
! AATCCCAATTTCTTAATTCA+GGG - chr8_3:61853498-61853517 Msa1300330:intron 25.0%
! AAACCCTGAATTAAGAAATT+GGG + chr8_3:61853504-61853523 None:intergenic 25.0%
! AAAACCCTGAATTAAGAAAT+TGG + chr8_3:61853505-61853524 None:intergenic 25.0%
! GACTACTAAAAAGAAGAAAA+AGG + chr8_3:61853592-61853611 None:intergenic 25.0%
! ATATTTCTCCAAATGAGATT+TGG + chr8_3:61853680-61853699 None:intergenic 25.0%
!!! ATCCGTTGATTTAAATTGAA+TGG - chr8_3:61853869-61853888 Msa1300330:intron 25.0%
! GACCATTCAATTTAAATCAA+CGG + chr8_3:61853874-61853893 None:intergenic 25.0%
! TTGATTTAAATTGAATGGTC+AGG - chr8_3:61853874-61853893 Msa1300330:intron 25.0%
!! ACATGAATTTTATCCAACTA+AGG + chr8_3:61854038-61854057 None:intergenic 25.0%
!! TCTAGTTTAGAAATCTACAA+TGG - chr8_3:61854071-61854090 Msa1300330:intron 25.0%
! TAACTAGGAACTATCTAATA+TGG - chr8_3:61854206-61854225 Msa1300330:intron 25.0%
! ATATAAGTCTGTTAAGAAAC+AGG + chr8_3:61854245-61854264 None:intergenic 25.0%
!! TATTTTCTGTATTTGAGCAA+AGG + chr8_3:61854328-61854347 None:intergenic 25.0%
!! TATTATTTTCCATAACAGAC+TGG - chr8_3:61854642-61854661 Msa1300330:intron 25.0%
!! ATTATTTTCCATAACAGACT+GGG - chr8_3:61854643-61854662 Msa1300330:intron 25.0%
!! TATTTGTTAAAATCAAGGGA+AGG + chr8_3:61854732-61854751 None:intergenic 25.0%
! TCAAATTTATACCTCACAAT+TGG + chr8_3:61854876-61854895 None:intergenic 25.0%
! CCTACAAAATTTATTTACAC+TGG + chr8_3:61854971-61854990 None:intergenic 25.0%
!! CCAGTGTAAATAAATTTTGT+AGG - chr8_3:61854968-61854987 Msa1300330:intron 25.0%
! TTCAGAGTCAAATAAATTCA+AGG - chr8_3:61855179-61855198 Msa1300330:intron 25.0%
! AGCATCTCAAAAAAGTTATT+AGG + chr8_3:61855398-61855417 None:intergenic 25.0%
! GATACTAATTGCTAACTATT+TGG - chr8_3:61855502-61855521 Msa1300330:intron 25.0%
!!! CTGATAAAGTTTTGATATCA+TGG - chr8_3:61855543-61855562 Msa1300330:intron 25.0%
! TTAAATTAGTATCCACTCAT+AGG + chr8_3:61855767-61855786 None:intergenic 25.0%
! ATTTAAGAAACTATAGAGTG+TGG - chr8_3:61855890-61855909 Msa1300330:intron 25.0%
! ATTCTATTGTATATTCTCCT+TGG - chr8_3:61856215-61856234 Msa1300330:intron 25.0%
! TTCTATTGTATATTCTCCTT+GGG - chr8_3:61856216-61856235 Msa1300330:intron 25.0%
!!! ATGACATAACTTACTTTTGT+AGG - chr8_3:61856259-61856278 Msa1300330:intron 25.0%
! GAACAAATTCTATTACCTAA+AGG + chr8_3:61856383-61856402 None:intergenic 25.0%
!! TATTCATTAAGATTCTAGAG+GGG - chr8_3:61856406-61856425 Msa1300330:intron 25.0%
!!! TTACCTATTTTTTACACAAG+AGG + chr8_3:61856501-61856520 None:intergenic 25.0%
! TCTTGTGTAAAAAATAGGTA+AGG - chr8_3:61856500-61856519 Msa1300330:CDS 25.0%
! TTATCTCCAATATATGAATC+CGG - chr8_3:61856751-61856770 Msa1300330:CDS 25.0%
! AAATCATTTAAACCCAATCT+GGG - chr8_3:61856777-61856796 Msa1300330:intron 25.0%
!!! TGTTTCTACTACAACTTTTA+GGG + chr8_3:61856977-61856996 None:intergenic 25.0%
!! ATAAAAATTTTGTGCAGACT+TGG + chr8_3:61857556-61857575 None:intergenic 25.0%
! ACAAACAGTATCAAGATAAA+AGG + chr8_3:61857867-61857886 None:intergenic 25.0%
! TTCTCTATCTAATACGTATT+TGG - chr8_3:61858307-61858326 Msa1300330:CDS 25.0%
! TTGAGAAATTTGTATTCTGA+AGG - chr8_3:61858348-61858367 Msa1300330:CDS 25.0%
GAGAGTAAAAAACCACTAAA+CGG - chr8_3:61849462-61849481 Msa1300330:three_prime_UTR 30.0%
AAACCATGTAGTATTATCGA+CGG - chr8_3:61849530-61849549 Msa1300330:three_prime_UTR 30.0%
! ATCTTGAAAATCATTTTGCG+AGG - chr8_3:61849852-61849871 Msa1300330:three_prime_UTR 30.0%
GAATAATAGATTCTCCAAGA+AGG - chr8_3:61849970-61849989 Msa1300330:CDS 30.0%
ATAATAGATTCTCCAAGAAG+GGG - chr8_3:61849972-61849991 Msa1300330:CDS 30.0%
TTGACAGTTTAAATTGTGGT+TGG - chr8_3:61850071-61850090 Msa1300330:CDS 30.0%
TGACAGTTTAAATTGTGGTT+GGG - chr8_3:61850072-61850091 Msa1300330:CDS 30.0%
GTTTATATGCTATAAGCTAC+AGG + chr8_3:61850249-61850268 None:intergenic 30.0%
ATGATCAAAGTAGAGTTGTT+TGG - chr8_3:61850273-61850292 Msa1300330:CDS 30.0%
GCATTTCAAAAAACACGATA+AGG + chr8_3:61850336-61850355 None:intergenic 30.0%
!!! TATCGTGTTTTTTGAAATGC+TGG - chr8_3:61850336-61850355 Msa1300330:intron 30.0%
ATATCACCATATGTACTCAA+AGG + chr8_3:61850709-61850728 None:intergenic 30.0%
! ATTCTTTTTCTCGACATGAA+GGG + chr8_3:61850839-61850858 None:intergenic 30.0%
! TATTCTTTTTCTCGACATGA+AGG + chr8_3:61850840-61850859 None:intergenic 30.0%
TAGGGAAATTTGTCGTTAAA+GGG - chr8_3:61851132-61851151 Msa1300330:intron 30.0%
ATATGCATCTACAAGATGAA+TGG + chr8_3:61851172-61851191 None:intergenic 30.0%
TTCATCTTGTAGATGCATAT+AGG - chr8_3:61851172-61851191 Msa1300330:CDS 30.0%
TCATCTTGTAGATGCATATA+GGG - chr8_3:61851173-61851192 Msa1300330:CDS 30.0%
AAAGAATTAACACGAGTCTT+AGG + chr8_3:61851246-61851265 None:intergenic 30.0%
GAACCAAACGTTGAAAAATT+TGG - chr8_3:61851292-61851311 Msa1300330:intron 30.0%
TAAGACATAATCTCATCTTG+TGG - chr8_3:61851718-61851737 Msa1300330:CDS 30.0%
GTGAGGAATGCAAATTTAAA+TGG - chr8_3:61851744-61851763 Msa1300330:CDS 30.0%
!!! TTTTTTAAAAAGGCACGAGT+AGG + chr8_3:61851799-61851818 None:intergenic 30.0%
GAAAGAGAAAATTAGGTAAG+GGG - chr8_3:61851832-61851851 Msa1300330:intron 30.0%
CATATGGAACAGTTGTAAAA+TGG + chr8_3:61851892-61851911 None:intergenic 30.0%
ATCTAGTACAAGTCTAATTG+GGG + chr8_3:61852120-61852139 None:intergenic 30.0%
!!! TCTTAGGTGGTTTTTAGAAT+TGG + chr8_3:61852203-61852222 None:intergenic 30.0%
AGAACATTCTGTAGTATCTT+AGG + chr8_3:61852219-61852238 None:intergenic 30.0%
!! ACCTTAAAGCTTTAGTTTGA+GGG + chr8_3:61852286-61852305 None:intergenic 30.0%
!! AACCTTAAAGCTTTAGTTTG+AGG + chr8_3:61852287-61852306 None:intergenic 30.0%
AGAATGTTCAACAAGAATTC+TGG - chr8_3:61852323-61852342 Msa1300330:intron 30.0%
!! AACATTCTAATTGGCTTTCA+TGG + chr8_3:61852361-61852380 None:intergenic 30.0%
! GACGAAGTAATAGATTTTGT+TGG - chr8_3:61852385-61852404 Msa1300330:CDS 30.0%
!!! TGGCTATTGAATTGTTTTAG+AGG - chr8_3:61852902-61852921 Msa1300330:intron 30.0%
GACCATTCAATTCAAATCAA+CGG - chr8_3:61853205-61853224 Msa1300330:intron 30.0%
ATTCCATATCCATATAACCA+TGG - chr8_3:61853475-61853494 Msa1300330:intron 30.0%
ATTCCATGGTTATATGGATA+TGG + chr8_3:61853481-61853500 None:intergenic 30.0%
ATTAAGAAATTGGGATTCCA+TGG + chr8_3:61853495-61853514 None:intergenic 30.0%
GAATCCCAATTTCTTAATTC+AGG - chr8_3:61853497-61853516 Msa1300330:intron 30.0%
! GATTTGGAACCAAATAATCA+TGG + chr8_3:61853622-61853641 None:intergenic 30.0%
TTAAAACACAACTTCTAGGT+TGG + chr8_3:61853644-61853663 None:intergenic 30.0%
! AACCTAGAAGTTGTGTTTTA+AGG - chr8_3:61853643-61853662 Msa1300330:CDS 30.0%
AGATATGAGAAACAGATGTA+AGG - chr8_3:61853717-61853736 Msa1300330:intron 30.0%
GTAGATTAACAAGAGAGAAT+CGG - chr8_3:61853750-61853769 Msa1300330:intron 30.0%
! CTATCTAATATGGATTGCTA+TGG - chr8_3:61854216-61854235 Msa1300330:intron 30.0%
CTCAAATACAGAAAATACTC+TGG - chr8_3:61854331-61854350 Msa1300330:intron 30.0%
!! AATACTCTGGAGTTAGAAAA+TGG - chr8_3:61854344-61854363 Msa1300330:intron 30.0%
TTTATACCTCACAATTGGTA+AGG + chr8_3:61854871-61854890 None:intergenic 30.0%
AGCAAAAAGTTGTATATTGC+AGG - chr8_3:61855015-61855034 Msa1300330:CDS 30.0%
CAAAAAATGCCATATTTGCA+GGG - chr8_3:61855067-61855086 Msa1300330:intron 30.0%
AGTTATTAGGAAAACCAATG+TGG + chr8_3:61855385-61855404 None:intergenic 30.0%
!!! TGAAGAAATGACTGGTTTTT+TGG + chr8_3:61855605-61855624 None:intergenic 30.0%
TTATATCAGCATGTGTATGT+TGG + chr8_3:61855819-61855838 None:intergenic 30.0%
TACACAACTATATCAGTCAA+GGG + chr8_3:61855951-61855970 None:intergenic 30.0%
TTACACAACTATATCAGTCA+AGG + chr8_3:61855952-61855971 None:intergenic 30.0%
TTGACTGATATAGTTGTGTA+AGG - chr8_3:61855951-61855970 Msa1300330:intron 30.0%
!! GTTCTGAAATAATGATGACA+TGG - chr8_3:61856157-61856176 Msa1300330:intron 30.0%
TTTGTAGGAAAATTTAGCCT+TGG - chr8_3:61856274-61856293 Msa1300330:intron 30.0%
! TTGTAGGAAAATTTAGCCTT+GGG - chr8_3:61856275-61856294 Msa1300330:intron 30.0%
TACACTAATTAGAACTAGAC+TGG + chr8_3:61856723-61856742 None:intergenic 30.0%
TTTCAACCGGATTCATATAT+TGG + chr8_3:61856760-61856779 None:intergenic 30.0%
TGGGTTTAAATGATTTCAAC+CGG + chr8_3:61856773-61856792 None:intergenic 30.0%
GAAATCATTTAAACCCAATC+TGG - chr8_3:61856776-61856795 Msa1300330:intron 30.0%
GAATATATTGAACCCAGATT+GGG + chr8_3:61856792-61856811 None:intergenic 30.0%
!!! CTGTTTCTACTACAACTTTT+AGG + chr8_3:61856978-61856997 None:intergenic 30.0%
TAGAAACAGATCAAAGACTT+TGG - chr8_3:61856989-61857008 Msa1300330:intron 30.0%
AGAAACAGATCAAAGACTTT+GGG - chr8_3:61856990-61857009 Msa1300330:intron 30.0%
! TTCTACGTTTGATTGATTCA+TGG - chr8_3:61857412-61857431 Msa1300330:intron 30.0%
! TCTACGTTTGATTGATTCAT+GGG - chr8_3:61857413-61857432 Msa1300330:intron 30.0%
TAAACTGATGCGGAAAAAAA+TGG + chr8_3:61857451-61857470 None:intergenic 30.0%
TAAACAATTTCGAGATAAGG+CGG - chr8_3:61857575-61857594 Msa1300330:intron 30.0%
AAAACATACAGTCATTGATC+TGG + chr8_3:61857607-61857626 None:intergenic 30.0%
TGGAATCATGTTTCAGAAAT+TGG - chr8_3:61858100-61858119 Msa1300330:intron 30.0%
ATCATGTTTCAGAAATTGGA+AGG - chr8_3:61858104-61858123 Msa1300330:intron 30.0%
TCTTTCATCAATGCCAAAAT+GGG + chr8_3:61858146-61858165 None:intergenic 30.0%
ATCTTTCATCAATGCCAAAA+TGG + chr8_3:61858147-61858166 None:intergenic 30.0%
GAGAAATTAGATTTCTCAGT+GGG + chr8_3:61858292-61858311 None:intergenic 30.0%
AGAGAAATTAGATTTCTCAG+TGG + chr8_3:61858293-61858312 None:intergenic 30.0%
TTCTCAACATTATGACAACA+TGG + chr8_3:61858335-61858354 None:intergenic 30.0%
GGACCAATTGTTAATAGTTC+CGG - chr8_3:61849502-61849521 Msa1300330:three_prime_UTR 35.0%
TTTCCGTCGATAATACTACA+TGG + chr8_3:61849536-61849555 None:intergenic 35.0%
! GATTGAAAGGCATGAGTAAT+TGG + chr8_3:61849609-61849628 None:intergenic 35.0%
AATAGGAAGAAGAGTGGAAA+TGG + chr8_3:61849677-61849696 None:intergenic 35.0%
TTCCTATTCTACCCTTAAAC+CGG - chr8_3:61849689-61849708 Msa1300330:three_prime_UTR 35.0%
TTAAAATCAAAGTCACCGGT+GGG + chr8_3:61849750-61849769 None:intergenic 35.0%
!! GACTAGAAATTTGTTGAAGC+CGG + chr8_3:61849781-61849800 None:intergenic 35.0%
AAATGCTAATAGCATTCCCA+TGG - chr8_3:61849808-61849827 Msa1300330:three_prime_UTR 35.0%
AATGCTAATAGCATTCCCAT+GGG - chr8_3:61849809-61849828 Msa1300330:three_prime_UTR 35.0%
AGATCTGTCTTCGAATTTCA+TGG + chr8_3:61850105-61850124 None:intergenic 35.0%
ACTTTGTCAAAGAGAGACTT+AGG + chr8_3:61850222-61850241 None:intergenic 35.0%
! TGTTGTGTTTCGTTTTGCAT+CGG - chr8_3:61850554-61850573 Msa1300330:intron 35.0%
! GCTGTATGTGATTTTCTGTT+AGG - chr8_3:61850675-61850694 Msa1300330:intron 35.0%
TGCATACCTTTGAGTACATA+TGG - chr8_3:61850700-61850719 Msa1300330:intron 35.0%
ACAAGCATCATCAACTATCA+AGG + chr8_3:61850792-61850811 None:intergenic 35.0%
!! TGATAGTTGATGATGCTTGT+AGG - chr8_3:61850792-61850811 Msa1300330:intron 35.0%
!! GCTTGTAGGAAAATTTGTTG+TGG - chr8_3:61850806-61850825 Msa1300330:intron 35.0%
AAGAAAAATAAGCACTCGGA+GGG + chr8_3:61850896-61850915 None:intergenic 35.0%
AAAGAAAAATAAGCACTCGG+AGG + chr8_3:61850897-61850916 None:intergenic 35.0%
GTAGGGAAATTTGTCGTTAA+AGG - chr8_3:61851131-61851150 Msa1300330:intron 35.0%
AGACTCGTGTTAATTCTTTC+AGG - chr8_3:61851247-61851266 Msa1300330:intron 35.0%
!! ATCTTCAGACATGGTTTTAC+GGG + chr8_3:61851347-61851366 None:intergenic 35.0%
!! GATCTTCAGACATGGTTTTA+CGG + chr8_3:61851348-61851367 None:intergenic 35.0%
TTCAAATGTAAATGCACCTC+TGG + chr8_3:61851437-61851456 None:intergenic 35.0%
GGTTTCTGCAAATTCTATAC+AGG - chr8_3:61851494-61851513 Msa1300330:intron 35.0%
CATCATAGAGTATGCTTGTT+AGG + chr8_3:61851595-61851614 None:intergenic 35.0%
! AAGCATACTCTATGATGATG+AGG - chr8_3:61851598-61851617 Msa1300330:intron 35.0%
ACTGCTTATTAGCATGTGTA+TGG - chr8_3:61851647-61851666 Msa1300330:intron 35.0%
GACAGAGTTCAAATCTCATA+TGG + chr8_3:61851908-61851927 None:intergenic 35.0%
TGGAGCCTGATGAAATTATA+GGG - chr8_3:61851980-61851999 Msa1300330:intron 35.0%
AGATTTATTGGGGTAGAAGA+AGG - chr8_3:61852007-61852026 Msa1300330:intron 35.0%
ACATTCTGTAGTATCTTAGG+TGG + chr8_3:61852216-61852235 None:intergenic 35.0%
!! TAAAGCTTTAGTTTGAGGGA+GGG + chr8_3:61852282-61852301 None:intergenic 35.0%
!! TTAAAGCTTTAGTTTGAGGG+AGG + chr8_3:61852283-61852302 None:intergenic 35.0%
TCCCTCAAACTAAAGCTTTA+AGG - chr8_3:61852282-61852301 Msa1300330:intron 35.0%
TCGTCATGCAACATTCTAAT+TGG + chr8_3:61852370-61852389 None:intergenic 35.0%
! GATTTTGTTGGAACGGTTAT+TGG - chr8_3:61852397-61852416 Msa1300330:CDS 35.0%
!! ATTCTCAGTTTGTTGCTCAA+AGG + chr8_3:61852548-61852567 None:intergenic 35.0%
CAACAAACTGAGAATTGTCT+GGG - chr8_3:61852553-61852572 Msa1300330:intron 35.0%
GATCGTTTGCATCTTTATTC+TGG + chr8_3:61852580-61852599 None:intergenic 35.0%
TGCAAACGATCAAAACAATG+TGG - chr8_3:61852589-61852608 Msa1300330:intron 35.0%
ACGATCAAAACAATGTGGAA+AGG - chr8_3:61852594-61852613 Msa1300330:intron 35.0%
! TTGAACAACACTGGTTGAAA+GGG - chr8_3:61852649-61852668 Msa1300330:intron 35.0%
AGTATCTTAGATGATCTCTC+GGG + chr8_3:61852793-61852812 None:intergenic 35.0%
GAGTATCTTAGATGATCTCT+CGG + chr8_3:61852794-61852813 None:intergenic 35.0%
ATTTACCTGAAATCAACCAC+AGG + chr8_3:61853036-61853055 None:intergenic 35.0%
CGTTTCTTCAGCATAGATAA+AGG - chr8_3:61853081-61853100 Msa1300330:intron 35.0%
TATGGGATGTATCAAATGAG+AGG - chr8_3:61853147-61853166 Msa1300330:intron 35.0%
!! AGCCGTTGATTTGAATTGAA+TGG + chr8_3:61853210-61853229 None:intergenic 35.0%
ATCGTTGACATAGATGTCTA+TGG + chr8_3:61853457-61853476 None:intergenic 35.0%
ATTGGGATTCCATGGTTATA+TGG + chr8_3:61853487-61853506 None:intergenic 35.0%
CTCCTTAAAACACAACTTCT+AGG + chr8_3:61853648-61853667 None:intergenic 35.0%
TTACAGAGCCAAATCTCATT+TGG - chr8_3:61853669-61853688 Msa1300330:CDS 35.0%
! CATCTGTTTCTCATATCTCT+CGG + chr8_3:61853715-61853734 None:intergenic 35.0%
TTAACAAGAGAGAATCGGAT+TGG - chr8_3:61853755-61853774 Msa1300330:intron 35.0%
GCACGTGAAAAAAGAAAAAG+AGG - chr8_3:61853803-61853822 Msa1300330:intron 35.0%
!! AAATGGACTGTTGGAATATC+AGG - chr8_3:61854361-61854380 Msa1300330:intron 35.0%
AATCAAGGGAAGGATTCTAA+AGG + chr8_3:61854722-61854741 None:intergenic 35.0%
TTCTCTGATTTCTACTAGCA+GGG + chr8_3:61854907-61854926 None:intergenic 35.0%
TTTCTCTGATTTCTACTAGC+AGG + chr8_3:61854908-61854927 None:intergenic 35.0%
GTAGGGACTAAAACAAAACA+AGG - chr8_3:61854986-61855005 Msa1300330:intron 35.0%
GCAAAAAATGCCATATTTGC+AGG - chr8_3:61855066-61855085 Msa1300330:intron 35.0%
!!! ATTTTTGGTCCCTGCAAATA+TGG + chr8_3:61855079-61855098 None:intergenic 35.0%
! TGCTTCTGATTTGTAAGTTC+TGG - chr8_3:61855242-61855261 Msa1300330:intron 35.0%
TGAGTGCAATTTGAACAGAA+AGG + chr8_3:61855274-61855293 None:intergenic 35.0%
TAAAGCAATGATCTATGCCA+TGG - chr8_3:61855334-61855353 Msa1300330:intron 35.0%
! CTCATTAAGTTGTATTGCCA+TGG + chr8_3:61855354-61855373 None:intergenic 35.0%
! TGCTACTTGTAGATTTCAGA+TGG - chr8_3:61855414-61855433 Msa1300330:intron 35.0%
GCTACTTGTAGATTTCAGAT+GGG - chr8_3:61855415-61855434 Msa1300330:intron 35.0%
! ATGGGTTAACATAGCCTTTA+TGG - chr8_3:61855433-61855452 Msa1300330:intron 35.0%
ATATCATGGTCTACAGAATG+TGG - chr8_3:61855557-61855576 Msa1300330:intron 35.0%
! CTTACCTTAACTGGTTCAAT+TGG - chr8_3:61855694-61855713 Msa1300330:intron 35.0%
! AGCATGTGTATGTTGGTTAA+TGG + chr8_3:61855812-61855831 None:intergenic 35.0%
TCCATGTGTTAGATCCTATA+TGG - chr8_3:61855857-61855876 Msa1300330:intron 35.0%
ACCATATAGGATCTAACACA+TGG + chr8_3:61855861-61855880 None:intergenic 35.0%
ACACAACTATATCAGTCAAG+GGG + chr8_3:61855950-61855969 None:intergenic 35.0%
! GACATAAAACTCGGTGAAAA+TGG + chr8_3:61856025-61856044 None:intergenic 35.0%
TGGTAATCATATGCAACCAA+TGG - chr8_3:61856105-61856124 Msa1300330:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr8_3:61856447-61856466 Msa1300330:CDS 35.0%
CAGCCTCTTGTGTAAAAAAT+AGG - chr8_3:61856495-61856514 Msa1300330:CDS 35.0%
TTAATGAATAAAGGGCAACC+CGG + chr8_3:61856592-61856611 None:intergenic 35.0%
GGAATATATTGAACCCAGAT+TGG + chr8_3:61856793-61856812 None:intergenic 35.0%
GTTATTGAGTGTGATGATAG+TGG - chr8_3:61856855-61856874 Msa1300330:intron 35.0%
!! ATAGTGGATAAAATCCAGTG+TGG - chr8_3:61856871-61856890 Msa1300330:intron 35.0%
ATCTTGAGGATCTTATCGAA+GGG + chr8_3:61856952-61856971 None:intergenic 35.0%
TATCTTGAGGATCTTATCGA+AGG + chr8_3:61856953-61856972 None:intergenic 35.0%
!! CAACTTTTAGGGATATCTTG+AGG + chr8_3:61856966-61856985 None:intergenic 35.0%
GAAACAGATCAAAGACTTTG+GGG - chr8_3:61856991-61857010 Msa1300330:intron 35.0%
TACTAGTCATCACCTTAAGT+AGG - chr8_3:61857137-61857156 Msa1300330:CDS 35.0%
! GTTTGATTGATTCATGGGTT+CGG - chr8_3:61857418-61857437 Msa1300330:intron 35.0%
! TTTGATTGATTCATGGGTTC+GGG - chr8_3:61857419-61857438 Msa1300330:intron 35.0%
TAACTATTGGACATAGAAGG+AGG + chr8_3:61857664-61857683 None:intergenic 35.0%
CTGTAACTATTGGACATAGA+AGG + chr8_3:61857667-61857686 None:intergenic 35.0%
AATAGCATCAACCAAACCAT+GGG + chr8_3:61857766-61857785 None:intergenic 35.0%
TAATATACCTCAAGACAGAC+AGG - chr8_3:61857827-61857846 Msa1300330:intron 35.0%
ATACCTTATGATTCTATGCC+AGG - chr8_3:61857932-61857951 Msa1300330:CDS 35.0%
TAACCTGGCATAGAATCATA+AGG + chr8_3:61857938-61857957 None:intergenic 35.0%
CTTTCATCAATGCCAAAATG+GGG + chr8_3:61858145-61858164 None:intergenic 35.0%
AGTTCTACTACATAGAGAGA+GGG - chr8_3:61858173-61858192 Msa1300330:intron 35.0%
TCACACTACATAGATGTTGT+TGG + chr8_3:61858569-61858588 None:intergenic 35.0%
! ATACTACATGGTTTTTGCGC+CGG + chr8_3:61849524-61849543 None:intergenic 40.0%
TTGGAGGTGAGATGATGTAA+CGG + chr8_3:61849590-61849609 None:intergenic 40.0%
! TGAAAGGCATGAGTAATTGG+AGG + chr8_3:61849606-61849625 None:intergenic 40.0%
! AAATGGAAGGGTATGGGAAT+GGG + chr8_3:61849660-61849679 None:intergenic 40.0%
GAAGAAGAGTGGAAATGGAA+GGG + chr8_3:61849672-61849691 None:intergenic 40.0%
! TGGGATAATTTTCATCGCCA+CGG + chr8_3:61849731-61849750 None:intergenic 40.0%
CTTAAAATCAAAGTCACCGG+TGG + chr8_3:61849751-61849770 None:intergenic 40.0%
CGGCTTAAAATCAAAGTCAC+CGG + chr8_3:61849754-61849773 None:intergenic 40.0%
!! CGGTGACTTTGATTTTAAGC+CGG - chr8_3:61849752-61849771 Msa1300330:three_prime_UTR 40.0%
!! TTTGATTTTAAGCCGGTCAC+CGG - chr8_3:61849759-61849778 Msa1300330:three_prime_UTR 40.0%
GTTAGAGAGAATGCAAAACC+TGG + chr8_3:61849878-61849897 None:intergenic 40.0%
GCTTATGATCCTCGTATTTC+TGG - chr8_3:61850034-61850053 Msa1300330:CDS 40.0%
AGATACACACCAGAAATACG+AGG + chr8_3:61850046-61850065 None:intergenic 40.0%
! AATAGGCTAGCTGATAGGAT+AGG + chr8_3:61850472-61850491 None:intergenic 40.0%
AAAAGTAGCCGATGACGAAT+AGG + chr8_3:61850489-61850508 None:intergenic 40.0%
AGAAAAATAAGCACTCGGAG+GGG + chr8_3:61850895-61850914 None:intergenic 40.0%
CTGAACAACTAGCATTGCAA+AGG + chr8_3:61851034-61851053 None:intergenic 40.0%
!! TCAGGTGTTTTTGACAACCT+TGG - chr8_3:61851265-61851284 Msa1300330:intron 40.0%
! CAACGTTTGGTTCAATTCCA+AGG + chr8_3:61851285-61851304 None:intergenic 40.0%
AAATGTAAATGCACCTCTGG+CGG + chr8_3:61851434-61851453 None:intergenic 40.0%
AGTAGACAGACTGAAAGAAG+AGG - chr8_3:61851565-61851584 Msa1300330:intron 40.0%
GTAGACAGACTGAAAGAAGA+GGG - chr8_3:61851566-61851585 Msa1300330:intron 40.0%
ATGAGGTACATGCACTACTT+TGG - chr8_3:61851615-61851634 Msa1300330:intron 40.0%
GATTTGAACTCTGTCTCTTG+AGG - chr8_3:61851913-61851932 Msa1300330:intron 40.0%
TCATCAGGCTCCACATATAT+GGG + chr8_3:61851973-61851992 None:intergenic 40.0%
TTCATCAGGCTCCACATATA+TGG + chr8_3:61851974-61851993 None:intergenic 40.0%
GTGGAGCCTGATGAAATTAT+AGG - chr8_3:61851979-61851998 Msa1300330:intron 40.0%
GCAACAAACTGAGAATTGTC+TGG - chr8_3:61852552-61852571 Msa1300330:intron 40.0%
! AACCAGTGTTGTTCAAGTAG+TGG + chr8_3:61852645-61852664 None:intergenic 40.0%
! CTTGAACAACACTGGTTGAA+AGG - chr8_3:61852648-61852667 Msa1300330:intron 40.0%
GGTTGAAAGGGAAGATATGT+TGG - chr8_3:61852661-61852680 Msa1300330:intron 40.0%
TTAGAGGATGCACTCAAATG+AGG - chr8_3:61852918-61852937 Msa1300330:intron 40.0%
! GCAGGTTATCACTAAGTTGA+AGG - chr8_3:61852978-61852997 Msa1300330:intron 40.0%
! TAAGTTGAAGGAGAGACTTC+AGG - chr8_3:61852990-61853009 Msa1300330:intron 40.0%
AACAGACAAAAAACTGCCTG+TGG - chr8_3:61853017-61853036 Msa1300330:intron 40.0%
GACGTAACCTACTCAAAGAA+TGG + chr8_3:61853062-61853081 None:intergenic 40.0%
TCTTCAGCATAGATAAAGGC+TGG - chr8_3:61853085-61853104 Msa1300330:intron 40.0%
AGAGGAGTTCTTATTGTGAG+AGG - chr8_3:61853165-61853184 Msa1300330:intron 40.0%
TTCTTATTGTGAGAGGTGAG+AGG - chr8_3:61853172-61853191 Msa1300330:intron 40.0%
ATACAGAAGGAAGATGTTGC+AGG + chr8_3:61853260-61853279 None:intergenic 40.0%
TACTATATGCAATGGCACCA+TGG + chr8_3:61853315-61853334 None:intergenic 40.0%
TATAGAAAGGAGTTCGTCCA+TGG + chr8_3:61853366-61853385 None:intergenic 40.0%
! CACAACTTCTAGGTTGGATT+TGG + chr8_3:61853638-61853657 None:intergenic 40.0%
TCTCATATCTCTCGGCATAA+AGG + chr8_3:61853707-61853726 None:intergenic 40.0%
GATTGGAGAAGAAACAGACA+TGG - chr8_3:61853772-61853791 Msa1300330:intron 40.0%
TAGGGGATGTATCAAATGAG+AGG + chr8_3:61853932-61853951 None:intergenic 40.0%
GGTACAAGTCATGAGAACTA+CGG + chr8_3:61854165-61854184 None:intergenic 40.0%
!! GGAGTTAGAAAATGGACTGT+TGG - chr8_3:61854352-61854371 Msa1300330:intron 40.0%
TCCAATAACACCTTTGCTAG+GGG + chr8_3:61854455-61854474 None:intergenic 40.0%
CTCCAATAACACCTTTGCTA+GGG + chr8_3:61854456-61854475 None:intergenic 40.0%
TCTCCAATAACACCTTTGCT+AGG + chr8_3:61854457-61854476 None:intergenic 40.0%
AGTTCATTGAGAAGATCCGT+AGG - chr8_3:61854479-61854498 Msa1300330:intron 40.0%
GTTCATTGAGAAGATCCGTA+GGG - chr8_3:61854480-61854499 Msa1300330:intron 40.0%
AAGTATTTCCTACTGAGCAC+CGG - chr8_3:61854696-61854715 Msa1300330:intron 40.0%
AAACTGCAAGAACAAGCATC+AGG - chr8_3:61854777-61854796 Msa1300330:intron 40.0%
TAGCTTCCTTACCAATTGTG+AGG - chr8_3:61854862-61854881 Msa1300330:intron 40.0%
TCTCTGATTTCTACTAGCAG+GGG + chr8_3:61854906-61854925 None:intergenic 40.0%
ATTATCCGAATTGACAGTCC+AGG - chr8_3:61855207-61855226 Msa1300330:intron 40.0%
AATGAGAACCTGAACCACAT+TGG - chr8_3:61855368-61855387 Msa1300330:intron 40.0%
TAGGAAAACCAATGTGGTTC+AGG + chr8_3:61855379-61855398 None:intergenic 40.0%
ACAGAATGTGGAGAGAAATC+AGG - chr8_3:61855569-61855588 Msa1300330:intron 40.0%
TCGGACATTGAAGAAATGAC+TGG + chr8_3:61855613-61855632 None:intergenic 40.0%
CATTTCTTCAATGTCCGATG+TGG - chr8_3:61855615-61855634 Msa1300330:intron 40.0%
GCAGAAAGTCTTACCTTAAC+TGG - chr8_3:61855685-61855704 Msa1300330:intron 40.0%
CACTCCAATTGAACCAGTTA+AGG + chr8_3:61855701-61855720 None:intergenic 40.0%
! CTTAACTGGTTCAATTGGAG+TGG - chr8_3:61855699-61855718 Msa1300330:intron 40.0%
TTTCTTCTACCAAAAGACCC+AGG + chr8_3:61855736-61855755 None:intergenic 40.0%
! TGGGTCTTTTGGTAGAAGAA+AGG - chr8_3:61855735-61855754 Msa1300330:intron 40.0%
! GTCTTTTGGTAGAAGAAAGG+AGG - chr8_3:61855738-61855757 Msa1300330:intron 40.0%
AAGAAACTATAGAGTGTGGC+CGG - chr8_3:61855894-61855913 Msa1300330:intron 40.0%
ACTGATTATAGTTGAGTGCC+CGG + chr8_3:61855916-61855935 None:intergenic 40.0%
CACAACTATATCAGTCAAGG+GGG + chr8_3:61855949-61855968 None:intergenic 40.0%
CAAGAAGCGAAGAACATCTA+GGG + chr8_3:61855980-61855999 None:intergenic 40.0%
ACAAGAAGCGAAGAACATCT+AGG + chr8_3:61855981-61856000 None:intergenic 40.0%
ATGTTCTTCGCTTCTTGTTG+TGG - chr8_3:61855983-61856002 Msa1300330:intron 40.0%
! TTTTCAGCTACAGCTTCCAT+TGG + chr8_3:61856124-61856143 None:intergenic 40.0%
TGGTAAAGTCATGAACAGTC+AGG - chr8_3:61856177-61856196 Msa1300330:intron 40.0%
TCTTCTCGTAAAGTTTCCCA+AGG + chr8_3:61856294-61856313 None:intergenic 40.0%
GGGAAACTTTACGAGAAGAT+TGG - chr8_3:61856295-61856314 Msa1300330:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - chr8_3:61856522-61856541 Msa1300330:CDS 40.0%
CGTACAATACACCAAATGGT+GGG - chr8_3:61856526-61856545 Msa1300330:intron 40.0%
TCGTACAGTTGGATATCAGA+TGG + chr8_3:61856645-61856664 None:intergenic 40.0%
ATTAGAACTAGACTGGAGCT+TGG + chr8_3:61856716-61856735 None:intergenic 40.0%
CACACTCAATAACTCGATTG+AGG + chr8_3:61856848-61856867 None:intergenic 40.0%
TACGACAAACTAAACTCACG+TGG + chr8_3:61856900-61856919 None:intergenic 40.0%
!! GTGAGTTTAGTTTGTCGTAG+TGG - chr8_3:61856901-61856920 Msa1300330:intron 40.0%
TTTGTCGTAGTGGCAATTGT+AGG - chr8_3:61856911-61856930 Msa1300330:intron 40.0%
TATCGAAGGGATCCTGAAAA+GGG + chr8_3:61856939-61856958 None:intergenic 40.0%
TTATCGAAGGGATCCTGAAA+AGG + chr8_3:61856940-61856959 None:intergenic 40.0%
! AAGACTTTGGGGATGTAGAT+TGG - chr8_3:61857002-61857021 Msa1300330:intron 40.0%
CTAGTAGTGCCTTATACTGA+TGG + chr8_3:61857123-61857142 None:intergenic 40.0%
ATATTCCTACACTGTAAGCC+CGG + chr8_3:61857165-61857184 None:intergenic 40.0%
CTTATTGTGTCTTGGAGAGT+GGG + chr8_3:61857262-61857281 None:intergenic 40.0%
CAAGACACAATAAGGAGAGA+CGG - chr8_3:61857268-61857287 Msa1300330:intron 40.0%
AAGACACAATAAGGAGAGAC+GGG - chr8_3:61857269-61857288 Msa1300330:intron 40.0%
GAGAAATCAAGAGAGAGAAG+AGG - chr8_3:61857291-61857310 Msa1300330:intron 40.0%
GAGAATATATGTGTCTGCCT+TGG + chr8_3:61857486-61857505 None:intergenic 40.0%
GGGATAGTAGCTGTAACTAT+TGG + chr8_3:61857677-61857696 None:intergenic 40.0%
CAATAGCATCAACCAAACCA+TGG + chr8_3:61857767-61857786 None:intergenic 40.0%
!! CATGGTTTGGTTGATGCTAT+TGG - chr8_3:61857765-61857784 Msa1300330:intron 40.0%
! GTTTGGTTGATGCTATTGGT+GGG - chr8_3:61857769-61857788 Msa1300330:intron 40.0%
AAATCAACCTGTCTGTCTTG+AGG + chr8_3:61857837-61857856 None:intergenic 40.0%
CTTAAAATCTCGGGTAGAGA+AGG + chr8_3:61857987-61858006 None:intergenic 40.0%
! TCTCTACCCGAGATTTTAAG+CGG - chr8_3:61857987-61858006 Msa1300330:CDS 40.0%
ACCAAGACCGCTTAAAATCT+CGG + chr8_3:61857997-61858016 None:intergenic 40.0%
AACACTCAAGGAACTACTAG+AGG - chr8_3:61858040-61858059 Msa1300330:CDS 40.0%
! GAGGACTTGACATTTTCTGA+TGG - chr8_3:61858059-61858078 Msa1300330:CDS 40.0%
CTCTCTATGTAGTAGAACTG+AGG + chr8_3:61858172-61858191 None:intergenic 40.0%
CAGTTCTACTACATAGAGAG+AGG - chr8_3:61858172-61858191 Msa1300330:intron 40.0%
GTTCTACTACATAGAGAGAG+GGG - chr8_3:61858174-61858193 Msa1300330:intron 40.0%
TTCTACTACATAGAGAGAGG+GGG - chr8_3:61858175-61858194 Msa1300330:intron 40.0%
AACGTGAATCCAAACAAGAG+CGG + chr8_3:61858422-61858441 None:intergenic 40.0%
TGTTGTTGGTCATCACTAAG+AGG + chr8_3:61858555-61858574 None:intergenic 40.0%
GCGCCGGAACTATTAACAAT+TGG + chr8_3:61849508-61849527 None:intergenic 45.0%
! GTGAGATGATGTAACGGAAG+CGG + chr8_3:61849584-61849603 None:intergenic 45.0%
! GAAATGGAAGGGTATGGGAA+TGG + chr8_3:61849661-61849680 None:intergenic 45.0%
! GAGTGGAAATGGAAGGGTAT+GGG + chr8_3:61849666-61849685 None:intergenic 45.0%
AGAGTGGAAATGGAAGGGTA+TGG + chr8_3:61849667-61849686 None:intergenic 45.0%
GGAAGAAGAGTGGAAATGGA+AGG + chr8_3:61849673-61849692 None:intergenic 45.0%
GGGTAGAATAGGAAGAAGAG+TGG + chr8_3:61849683-61849702 None:intergenic 45.0%
GTCCGGTTTAAGGGTAGAAT+AGG + chr8_3:61849694-61849713 None:intergenic 45.0%
GGCGATGAAAATTATCCCAC+CGG - chr8_3:61849732-61849751 Msa1300330:three_prime_UTR 45.0%
!! AATTTGTTGAAGCCGGTGAC+CGG + chr8_3:61849774-61849793 None:intergenic 45.0%
! GAAAATCATTTTGCGAGGCC+AGG - chr8_3:61849857-61849876 Msa1300330:exon 45.0%
! TGACGAATAGGCTAGCTGAT+AGG + chr8_3:61850477-61850496 None:intergenic 45.0%
! TCAGCTAGCCTATTCGTCAT+CGG - chr8_3:61850478-61850497 Msa1300330:CDS 45.0%
GTTTGGATTCAGCGTTCAAG+CGG - chr8_3:61850917-61850936 Msa1300330:intron 45.0%
GTTCAAGCGGCATTTGTCAA+AGG - chr8_3:61850930-61850949 Msa1300330:intron 45.0%
GTAATGCAGTCAGCATCTCA+CGG + chr8_3:61851372-61851391 None:intergenic 45.0%
! TGAGATGCTGACTGCATTAC+TGG - chr8_3:61851372-61851391 Msa1300330:intron 45.0%
ATCTCATCTTGTGGCTAGTG+AGG - chr8_3:61851727-61851746 Msa1300330:CDS 45.0%
! TATATGGGGTGTCAACTCAG+CGG + chr8_3:61851958-61851977 None:intergenic 45.0%
GAGTTGACACCCCATATATG+TGG - chr8_3:61851960-61851979 Msa1300330:intron 45.0%
CATCAGGCTCCACATATATG+GGG + chr8_3:61851972-61851991 None:intergenic 45.0%
ACCATTGTAACGCAGCCTTT+CGG + chr8_3:61852622-61852641 None:intergenic 45.0%
GTCCACTACTTGAACAACAC+TGG - chr8_3:61852640-61852659 Msa1300330:intron 45.0%
! AACTGCCTGTGGTTGATTTC+AGG - chr8_3:61853028-61853047 Msa1300330:intron 45.0%
! AATGGCACCATGGTTTGTGA+GGG + chr8_3:61853305-61853324 None:intergenic 45.0%
! TGGAGTGTTTCGAAGGATTG+TGG + chr8_3:61853346-61853365 None:intergenic 45.0%
CAATCCTTCGAAACACTCCA+TGG - chr8_3:61853346-61853365 Msa1300330:intron 45.0%
TGGAGAAGAAACAGACATGG+AGG - chr8_3:61853775-61853794 Msa1300330:intron 45.0%
CTCTTATTGTGAGAGGTGAG+AGG + chr8_3:61853907-61853926 None:intergenic 45.0%
AGAGGAGCTCTTATTGTGAG+AGG + chr8_3:61853914-61853933 None:intergenic 45.0%
TGGACTGTTGGAATATCAGG+TGG - chr8_3:61854364-61854383 Msa1300330:intron 45.0%
TAAGTGTACCTCTGACCCTA+CGG + chr8_3:61854498-61854517 None:intergenic 45.0%
TTTCCATAACAGACTGGGCT+TGG - chr8_3:61854648-61854667 Msa1300330:intron 45.0%
TTCCATAACAGACTGGGCTT+GGG - chr8_3:61854649-61854668 Msa1300330:intron 45.0%
! AAGGGAAGGATTCTAAAGGC+CGG + chr8_3:61854718-61854737 None:intergenic 45.0%
CTCTGATTTCTACTAGCAGG+GGG + chr8_3:61854905-61854924 None:intergenic 45.0%
AGCAAGTGGAGGATACTACA+TGG - chr8_3:61855639-61855658 Msa1300330:intron 45.0%
TGGAGGATACTACATGGCAA+TGG - chr8_3:61855645-61855664 Msa1300330:intron 45.0%
GGAGGATACTACATGGCAAT+GGG - chr8_3:61855646-61855665 Msa1300330:intron 45.0%
AGAAACTATAGAGTGTGGCC+GGG - chr8_3:61855895-61855914 Msa1300330:intron 45.0%
CAGCTGAACAACGTTCCTTT+AGG - chr8_3:61856365-61856384 Msa1300330:intron 45.0%
! AGATTCTAGAGGGGTAACCT+TGG - chr8_3:61856415-61856434 Msa1300330:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr8_3:61856451-61856470 Msa1300330:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr8_3:61856525-61856544 Msa1300330:intron 45.0%
!! CACAGAAAGTGTCGTACAGT+TGG + chr8_3:61856656-61856675 None:intergenic 45.0%
! CAATTGTAGGTGCCCTTTTC+AGG - chr8_3:61856924-61856943 Msa1300330:intron 45.0%
! ACTTTGGGGATGTAGATTGG+TGG - chr8_3:61857005-61857024 Msa1300330:intron 45.0%
TTCCCTCAGCCATCAGTATA+AGG - chr8_3:61857111-61857130 Msa1300330:CDS 45.0%
TGCCTTATACTGATGGCTGA+GGG + chr8_3:61857116-61857135 None:intergenic 45.0%
CCACCACCTCATATATACCT+CGG - chr8_3:61857222-61857241 Msa1300330:CDS 45.0%
CACCACCTCATATATACCTC+GGG - chr8_3:61857223-61857242 Msa1300330:CDS 45.0%
ACCTCATATATACCTCGGGT+GGG - chr8_3:61857227-61857246 Msa1300330:intron 45.0%
CCTTATTGTGTCTTGGAGAG+TGG + chr8_3:61857263-61857282 None:intergenic 45.0%
CCACTCTCCAAGACACAATA+AGG - chr8_3:61857260-61857279 Msa1300330:intron 45.0%
CGTCTCTCCTTATTGTGTCT+TGG + chr8_3:61857270-61857289 None:intergenic 45.0%
ATCAAGAGAGAGAAGAGGTG+TGG - chr8_3:61857296-61857315 Msa1300330:intron 45.0%
! AGAGAGAAGAGGTGTGGATT+GGG - chr8_3:61857302-61857321 Msa1300330:intron 45.0%
AGGCAACACTAATGACAAGC+AGG + chr8_3:61857368-61857387 None:intergenic 45.0%
! ATTGATTCATGGGTTCGGGT+TGG - chr8_3:61857423-61857442 Msa1300330:intron 45.0%
TCTCTCTCTCTCTCAAGTAC+AGG - chr8_3:61857508-61857527 Msa1300330:intron 45.0%
! GCAAATAGCTCTGCTTCATG+TGG + chr8_3:61857534-61857553 None:intergenic 45.0%
CATCTTGTCTACCTAGCAAC+GGG + chr8_3:61857697-61857716 None:intergenic 45.0%
CCATCTTGTCTACCTAGCAA+CGG + chr8_3:61857698-61857717 None:intergenic 45.0%
CTAGGTAGACAAGATGGAAG+AGG - chr8_3:61857701-61857720 Msa1300330:intron 45.0%
AAGATGGAAGAGGTTGCACA+GGG - chr8_3:61857711-61857730 Msa1300330:intron 45.0%
! GGTTTGGTTGATGCTATTGG+TGG - chr8_3:61857768-61857787 Msa1300330:intron 45.0%
TCTATGCCAGGTTACTGTTG+TGG - chr8_3:61857944-61857963 Msa1300330:CDS 45.0%
CCAAGACCGCTTAAAATCTC+GGG + chr8_3:61857996-61858015 None:intergenic 45.0%
! AAGCGGTCTTGGTAATTCTC+TGG - chr8_3:61858004-61858023 Msa1300330:CDS 45.0%
! GGTCTTGGTAATTCTCTGGT+TGG - chr8_3:61858008-61858027 Msa1300330:CDS 45.0%
TGGTAATTCTCTGGTTGGAG+TGG - chr8_3:61858013-61858032 Msa1300330:CDS 45.0%
! TCCATCTGCTAACCCCATTT+TGG - chr8_3:61858130-61858149 Msa1300330:intron 45.0%
CAAGATACTCCGCTCTTGTT+TGG - chr8_3:61858410-61858429 Msa1300330:CDS 45.0%
! GCTCTTGTTTGGATTCACGT+TGG - chr8_3:61858421-61858440 Msa1300330:CDS 45.0%
CCTCTCTGCACACAATCATT+AGG + chr8_3:61858464-61858483 None:intergenic 45.0%
CCTAATGATTGTGTGCAGAG+AGG - chr8_3:61858461-61858480 Msa1300330:CDS 45.0%
AATGATTGTGTGCAGAGAGG+AGG - chr8_3:61858464-61858483 Msa1300330:CDS 45.0%
ATGATTGTGTGCAGAGAGGA+GGG - chr8_3:61858465-61858484 Msa1300330:CDS 45.0%
TCACTAAGAGGAGAGTTCGA+TGG + chr8_3:61858543-61858562 None:intergenic 45.0%
!! ATTATTATTAATAATAATCA+TGG - chr8_3:61851857-61851876 Msa1300330:intron 5.0%
!! ATATATATATATATATATAG+GGG + chr8_3:61853949-61853968 None:intergenic 5.0%
AAAACCACTAAACGGCGACG+TGG - chr8_3:61849470-61849489 Msa1300330:three_prime_UTR 50.0%
! AGATGATGTAACGGAAGCGG+TGG + chr8_3:61849581-61849600 None:intergenic 50.0%
TGGGATGAGAGAGAAAGGAG+CGG + chr8_3:61849641-61849660 None:intergenic 50.0%
GGGAATGGGATGAGAGAGAA+AGG + chr8_3:61849646-61849665 None:intergenic 50.0%
AGCAACGGAGTCCGGTTTAA+GGG + chr8_3:61849703-61849722 None:intergenic 50.0%
GGGAAGAGATAACCCCTTCT+TGG + chr8_3:61849987-61850006 None:intergenic 50.0%
CTCACGGTGATCTTCAGACA+TGG + chr8_3:61851356-61851375 None:intergenic 50.0%
GATACAGTATCTTCCGCCAG+AGG - chr8_3:61851418-61851437 Msa1300330:intron 50.0%
!! CAATGTGGAAAGGTGCCGAA+AGG - chr8_3:61852604-61852623 Msa1300330:intron 50.0%
TGTCCATCCCTCACAAACCA+TGG - chr8_3:61853295-61853314 Msa1300330:intron 50.0%
! CAATGGCACCATGGTTTGTG+AGG + chr8_3:61853306-61853325 None:intergenic 50.0%
! TCGTCCATGGAGTGTTTCGA+AGG + chr8_3:61853353-61853372 None:intergenic 50.0%
!! CCTTTGCTAGGGGCACTAAA+TGG + chr8_3:61854445-61854464 None:intergenic 50.0%
CCATTTAGTGCCCCTAGCAA+AGG - chr8_3:61854442-61854461 Msa1300330:intron 50.0%
!! GCCCCTAGCAAAGGTGTTAT+TGG - chr8_3:61854451-61854470 Msa1300330:intron 50.0%
TGTGACCAGGACACAAACGA+TGG + chr8_3:61855141-61855160 None:intergenic 50.0%
AAAAGACGACTCGTGTGACC+AGG + chr8_3:61855154-61855173 None:intergenic 50.0%
ATCCGAATTGACAGTCCAGG+AGG - chr8_3:61855210-61855229 Msa1300330:intron 50.0%
CACCTCCTGGACTGTCAATT+CGG + chr8_3:61855215-61855234 None:intergenic 50.0%
GTGGAGAGAAATCAGGCTTC+TGG - chr8_3:61855576-61855595 Msa1300330:intron 50.0%
TACTACATGGCAATGGGAGC+AGG - chr8_3:61855652-61855671 Msa1300330:intron 50.0%
GGTTCAATTGGAGTGGTCAC+AGG - chr8_3:61855706-61855725 Msa1300330:intron 50.0%
! ACAGGTGAACCTGGGTCTTT+TGG - chr8_3:61855724-61855743 Msa1300330:intron 50.0%
!! GAAAGGAGGTGTCCTATGAG+TGG - chr8_3:61855752-61855771 Msa1300330:intron 50.0%
AGGAACGTTGTTCAGCTGCA+AGG + chr8_3:61856363-61856382 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr8_3:61856435-61856454 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - chr8_3:61856457-61856476 Msa1300330:CDS 50.0%
TCATGTGACTGGAAGGTCAC+GGG - chr8_3:61856458-61856477 Msa1300330:CDS 50.0%
CTAAAGCTCCCGCATAAGCA+GGG + chr8_3:61856565-61856584 None:intergenic 50.0%
ACTAAAGCTCCCGCATAAGC+AGG + chr8_3:61856566-61856585 None:intergenic 50.0%
AACTCACGTGGAATCCACAC+TGG + chr8_3:61856888-61856907 None:intergenic 50.0%
ACTGATGGCTGAGGGAACTA+GGG + chr8_3:61857108-61857127 None:intergenic 50.0%
TACTGATGGCTGAGGGAACT+AGG + chr8_3:61857109-61857128 None:intergenic 50.0%
GTGCCTTATACTGATGGCTG+AGG + chr8_3:61857117-61857136 None:intergenic 50.0%
TCATCACCTTAAGTAGGCGC+CGG - chr8_3:61857143-61857162 Msa1300330:CDS 50.0%
CCGAGGTATATATGAGGTGG+TGG + chr8_3:61857225-61857244 None:intergenic 50.0%
CACCCGAGGTATATATGAGG+TGG + chr8_3:61857228-61857247 None:intergenic 50.0%
CACCTCATATATACCTCGGG+TGG - chr8_3:61857226-61857245 Msa1300330:CDS 50.0%
ACCCACCCGAGGTATATATG+AGG + chr8_3:61857231-61857250 None:intergenic 50.0%
! GAGAGAGAAGAGGTGTGGAT+TGG - chr8_3:61857301-61857320 Msa1300330:intron 50.0%
!! AGAAGAGGTGTGGATTGGGT+GGG - chr8_3:61857306-61857325 Msa1300330:intron 50.0%
ACAGCTACTATCCCGTTGCT+AGG - chr8_3:61857683-61857702 Msa1300330:intron 50.0%
CCGTTGCTAGGTAGACAAGA+TGG - chr8_3:61857695-61857714 Msa1300330:intron 50.0%
CAAGATGGAAGAGGTTGCAC+AGG - chr8_3:61857710-61857729 Msa1300330:intron 50.0%
AGATGGAAGAGGTTGCACAG+GGG - chr8_3:61857712-61857731 Msa1300330:intron 50.0%
ATGGGATGCTGCATCCTTAC+CGG + chr8_3:61857748-61857767 None:intergenic 50.0%
AGAGCTCCACAACAGTAACC+TGG + chr8_3:61857953-61857972 None:intergenic 50.0%
! CCCGAGATTTTAAGCGGTCT+TGG - chr8_3:61857993-61858012 Msa1300330:CDS 50.0%
TGGAGTGGACGAAACACTCA+AGG - chr8_3:61858028-61858047 Msa1300330:CDS 50.0%
TGATGGAGTTCAAGCGCGAA+TGG - chr8_3:61858076-61858095 Msa1300330:CDS 50.0%
! GCCAAAATGGGGTTAGCAGA+TGG + chr8_3:61858134-61858153 None:intergenic 50.0%
TGATTGTGTGCAGAGAGGAG+GGG - chr8_3:61858466-61858485 Msa1300330:CDS 50.0%
TGTTTGACTGTTGCCTCCCA+GGG - chr8_3:61858510-61858529 Msa1300330:five_prime_UTR 50.0%
!! GTAACGGAAGCGGTGGATTG+CGG + chr8_3:61849574-61849593 None:intergenic 55.0%
GATGAGAGAGAAAGGAGCGG+TGG + chr8_3:61849638-61849657 None:intergenic 55.0%
CAGCAACGGAGTCCGGTTTA+AGG + chr8_3:61849704-61849723 None:intergenic 55.0%
CTTAAACCGGACTCCGTTGC+TGG - chr8_3:61849702-61849721 Msa1300330:three_prime_UTR 55.0%
CGTGTTGAACACGCTCCCAT+GGG + chr8_3:61849827-61849846 None:intergenic 55.0%
! CCATGGGAGCGTGTTCAACA+CGG - chr8_3:61849825-61849844 Msa1300330:three_prime_UTR 55.0%
GCCGAAAGGCTGCGTTACAA+TGG - chr8_3:61852618-61852637 Msa1300330:intron 55.0%
! GCACCATGGTTTGTGAGGGA+TGG + chr8_3:61853301-61853320 None:intergenic 55.0%
AGTACGACGAATGGTCCCTG+AGG + chr8_3:61854416-61854435 None:intergenic 55.0%
AGGGACCATTCGTCGTACTG+AGG - chr8_3:61854417-61854436 Msa1300330:intron 55.0%
GGGACCATTCGTCGTACTGA+GGG - chr8_3:61854418-61854437 Msa1300330:intron 55.0%
TGGACCCTCAGTACGACGAA+TGG + chr8_3:61854425-61854444 None:intergenic 55.0%
GAGAAGATCCGTAGGGTCAG+AGG - chr8_3:61854487-61854506 Msa1300330:intron 55.0%
CTCCCAAGCCCAGTCTGTTA+TGG + chr8_3:61854654-61854673 None:intergenic 55.0%
CATAACAGACTGGGCTTGGG+AGG - chr8_3:61854652-61854671 Msa1300330:intron 55.0%
TCTAAAGGCCGGTGCTCAGT+AGG + chr8_3:61854707-61854726 None:intergenic 55.0%
CTGCTCCATCGTTTGTGTCC+TGG - chr8_3:61855133-61855152 Msa1300330:intron 55.0%
!! GAAGCAAGAGCATCACCTCC+TGG + chr8_3:61855228-61855247 None:intergenic 55.0%
ATGTCCGATGTGGCAGCAAG+TGG - chr8_3:61855625-61855644 Msa1300330:intron 55.0%
! TCCTCCACTTGCTGCCACAT+CGG + chr8_3:61855632-61855651 None:intergenic 55.0%
GAGTGGTCACAGGTGAACCT+GGG - chr8_3:61855716-61855735 Msa1300330:intron 55.0%
GAAGGTCACGGGTTCAAGTC+TGG - chr8_3:61856469-61856488 Msa1300330:CDS 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr8_3:61856570-61856589 Msa1300330:intron 55.0%
CATCACCTTAAGTAGGCGCC+GGG - chr8_3:61857144-61857163 Msa1300330:CDS 55.0%
! GTCTTGGAGAGTGGGAGTGT+GGG + chr8_3:61857254-61857273 None:intergenic 55.0%
TGTCTTGGAGAGTGGGAGTG+TGG + chr8_3:61857255-61857274 None:intergenic 55.0%
!! GAGAAGAGGTGTGGATTGGG+TGG - chr8_3:61857305-61857324 Msa1300330:intron 55.0%
GGTAAGGATGCAGCATCCCA+TGG - chr8_3:61857747-61857766 Msa1300330:intron 55.0%
GGATGCAGCATCCCATGGTT+TGG - chr8_3:61857752-61857771 Msa1300330:intron 55.0%
ATCTCGGGTAGAGAAGGACG+AGG + chr8_3:61857981-61858000 None:intergenic 55.0%
GGAGTTCAAGCGCGAATGGA+TGG - chr8_3:61858080-61858099 Msa1300330:CDS 55.0%
CTGTTTGACTGTTGCCTCCC+AGG - chr8_3:61858509-61858528 Msa1300330:five_prime_UTR 55.0%
GTTCGATGGCAACATGCCCT+GGG + chr8_3:61858529-61858548 None:intergenic 55.0%
AGTTCGATGGCAACATGCCC+TGG + chr8_3:61858530-61858549 None:intergenic 55.0%
ACCACTAAACGGCGACGTGG+CGG - chr8_3:61849473-61849492 Msa1300330:three_prime_UTR 60.0%
! ACGGCGACGTGGCGGAAAAA+TGG - chr8_3:61849481-61849500 Msa1300330:three_prime_UTR 60.0%
! GCGGTGGCGTTGGGATTGAA+AGG + chr8_3:61849622-61849641 None:intergenic 60.0%
GAGAAAGGAGCGGTGGCGTT+GGG + chr8_3:61849631-61849650 None:intergenic 60.0%
AGAGAAAGGAGCGGTGGCGT+TGG + chr8_3:61849632-61849651 None:intergenic 60.0%
AAACCGGACTCCGTTGCTGG+TGG - chr8_3:61849705-61849724 Msa1300330:three_prime_UTR 60.0%
CCGTGTTGAACACGCTCCCA+TGG + chr8_3:61849828-61849847 None:intergenic 60.0%
TCCTTCTGTATACGCGCGCG+TGG - chr8_3:61853269-61853288 Msa1300330:intron 60.0%
ATAGCCGTCATCCGAGCCTC+AGG - chr8_3:61854397-61854416 Msa1300330:intron 60.0%
TAGCCGTCATCCGAGCCTCA+GGG - chr8_3:61854398-61854417 Msa1300330:intron 60.0%
GACGAATGGTCCCTGAGGCT+CGG + chr8_3:61854411-61854430 None:intergenic 60.0%
TCCGATGTGGCAGCAAGTGG+AGG - chr8_3:61855628-61855647 Msa1300330:intron 60.0%
GGAGTGGTCACAGGTGAACC+TGG - chr8_3:61855715-61855734 Msa1300330:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr8_3:61856424-61856443 Msa1300330:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr8_3:61856538-61856557 Msa1300330:intron 60.0%
CATAAGCAGGGTCCGGGAAG+GGG + chr8_3:61856553-61856572 None:intergenic 60.0%
GCATAAGCAGGGTCCGGGAA+GGG + chr8_3:61856554-61856573 None:intergenic 60.0%
CTTCCCGGACCCTGCTTATG+CGG - chr8_3:61856553-61856572 Msa1300330:intron 60.0%
TTCCCGGACCCTGCTTATGC+GGG - chr8_3:61856554-61856573 Msa1300330:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr8_3:61856571-61856590 Msa1300330:intron 60.0%
GTAAGCCCGGCGCCTACTTA+AGG + chr8_3:61857152-61857171 None:intergenic 60.0%
!! AGAGGTGTGGATTGGGTGGG+TGG - chr8_3:61857309-61857328 Msa1300330:intron 60.0%
!! GAGGTGTGGATTGGGTGGGT+GGG - chr8_3:61857310-61857329 Msa1300330:intron 60.0%
!! AGGTGTGGATTGGGTGGGTG+GGG - chr8_3:61857311-61857330 Msa1300330:intron 60.0%
TGGAAGAGGTTGCACAGGGG+AGG - chr8_3:61857715-61857734 Msa1300330:intron 60.0%
GGAAGAGGTTGCACAGGGGA+GGG - chr8_3:61857716-61857735 Msa1300330:intron 60.0%
AGGTTGCACAGGGGAGGGTT+TGG - chr8_3:61857721-61857740 Msa1300330:intron 60.0%
TCCGCCACGTCGCCGTTTAG+TGG + chr8_3:61849477-61849496 None:intergenic 65.0%
ATCGCCACGGCCACCAGCAA+CGG + chr8_3:61849718-61849737 None:intergenic 65.0%
GCCACGCGCGCGTATACAGA+AGG + chr8_3:61853273-61853292 None:intergenic 65.0%
GGTCCCTGAGGCTCGGATGA+CGG + chr8_3:61854404-61854423 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr8_3:61856540-61856559 None:intergenic 65.0%
CGCATAAGCAGGGTCCGGGA+AGG + chr8_3:61856555-61856574 None:intergenic 65.0%
CTCCCGCATAAGCAGGGTCC+GGG + chr8_3:61856559-61856578 None:intergenic 65.0%
GCTCCCGCATAAGCAGGGTC+CGG + chr8_3:61856560-61856579 None:intergenic 65.0%
!! AGGCGCCGGGCTTACAGTGT+AGG - chr8_3:61857157-61857176 Msa1300330:CDS 65.0%
GCACAGGGGAGGGTTTGGAC+CGG - chr8_3:61857726-61857745 Msa1300330:intron 65.0%
GGGGAGGGTTTGGACCGGTA+AGG - chr8_3:61857731-61857750 Msa1300330:intron 65.0%
CGATGGCAACATGCCCTGGG+AGG + chr8_3:61858526-61858545 None:intergenic 65.0%
CGGCCACCAGCAACGGAGTC+CGG + chr8_3:61849711-61849730 None:intergenic 70.0%
GACTCCGTTGCTGGTGGCCG+TGG - chr8_3:61849711-61849730 Msa1300330:three_prime_UTR 70.0%
! GGGAGTGTGGGACCCACCCG+AGG + chr8_3:61857242-61857261 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 61849460 61858599 61849460 ID=Msa1300330;Name=Msa1300330
chr8_3 mRNA 61849460 61858599 61849460 ID=Msa1300330-mRNA-1;Parent=Msa1300330;Name=Msa1300330-mRNA-1;_AED=0.25;_eAED=0.25;_QI=95|0.84|0.85|1|1|1|14|412|673
chr8_3 exon 61849460 61850105 61849460 ID=Msa1300330-mRNA-1:exon:18340;Parent=Msa1300330-mRNA-1
chr8_3 exon 61850211 61850354 61850211 ID=Msa1300330-mRNA-1:exon:18339;Parent=Msa1300330-mRNA-1
chr8_3 exon 61850442 61850567 61850442 ID=Msa1300330-mRNA-1:exon:18338;Parent=Msa1300330-mRNA-1
chr8_3 exon 61851159 61851229 61851159 ID=Msa1300330-mRNA-1:exon:18337;Parent=Msa1300330-mRNA-1
chr8_3 exon 61851716 61851778 61851716 ID=Msa1300330-mRNA-1:exon:18336;Parent=Msa1300330-mRNA-1
chr8_3 exon 61852332 61852486 61852332 ID=Msa1300330-mRNA-1:exon:18335;Parent=Msa1300330-mRNA-1
chr8_3 exon 61852806 61852875 61852806 ID=Msa1300330-mRNA-1:exon:18334;Parent=Msa1300330-mRNA-1
chr8_3 exon 61853551 61853717 61853551 ID=Msa1300330-mRNA-1:exon:18333;Parent=Msa1300330-mRNA-1
chr8_3 exon 61855010 61855077 61855010 ID=Msa1300330-mRNA-1:exon:18332;Parent=Msa1300330-mRNA-1
chr8_3 exon 61856440 61856543 61856440 ID=Msa1300330-mRNA-1:exon:18331;Parent=Msa1300330-mRNA-1
chr8_3 exon 61856620 61856790 61856620 ID=Msa1300330-mRNA-1:exon:18330;Parent=Msa1300330-mRNA-1
chr8_3 exon 61857108 61857245 61857108 ID=Msa1300330-mRNA-1:exon:18329;Parent=Msa1300330-mRNA-1
chr8_3 exon 61857917 61858103 61857917 ID=Msa1300330-mRNA-1:exon:18328;Parent=Msa1300330-mRNA-1
chr8_3 exon 61858181 61858599 61858181 ID=Msa1300330-mRNA-1:exon:18327;Parent=Msa1300330-mRNA-1
chr8_3 five_prime_UTR 61858505 61858599 61858505 ID=Msa1300330-mRNA-1:five_prime_utr;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61858181 61858504 61858181 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61857917 61858103 61857917 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61857108 61857245 61857108 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61856620 61856790 61856620 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61856440 61856543 61856440 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61855010 61855077 61855010 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61853551 61853717 61853551 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61852806 61852875 61852806 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61852332 61852486 61852332 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61851716 61851778 61851716 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61851159 61851229 61851159 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61850442 61850567 61850442 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61850211 61850354 61850211 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 CDS 61849872 61850105 61849872 ID=Msa1300330-mRNA-1:cds;Parent=Msa1300330-mRNA-1
chr8_3 three_prime_UTR 61849460 61849871 61849460 ID=Msa1300330-mRNA-1:three_prime_utr;Parent=Msa1300330-mRNA-1
Gene Sequence

>Msa1300330

ATGTCACTCACACGCTCCGCAATCCACCGCTTCCGTTACATCATCTCACCTCCAATTACTCATGCCTTTCAATCCCAACGCCACCGCTCCTTTCTCTCTCATCCCATTCCCATACCCTTCCATTTCCACTCTTCTTCCTATTCTACCCTTAAACCGGACTCCGTTGCTGGTGGCCGTGGCGATGAAAATTATCCCACCGGTGACTTTGATTTTAAGCCGGTCACCGGCTTCAACAAATTTCTAGTCAAGCTCAAAATGCTAATAGCATTCCCATGGGAGCGTGTTCAACACGGAAGCATCTTGAAAATCATTTTGCGAGGCCAGATATCTGATCAGCTGAATAATAGATTCTCCAAGAAGGGGTTATCTCTTCCCCAAATTTGCGATAATTTGTTGAAAGCAGCTTATGATCCTCGTATTTCTGGTGTGTATCTTCAAATTGACAGTTTAAATTGTGGTTGGGCTAAACTCCATGAAATTCGAAGACAGATCTTAAATTTCAGAAAATCAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCGAGAAAAAGAATATTACATTGCTTGCGCATGTGAAGAAATATATGCCCCTCCGAGTGCTTATTTTTCTTTGTTTGGATTCAGCGTTCAAGCGGCATTTGTCAAAGGTGTTTTTGACAACCTTGGAATTGAACCAAACGTTGAAAAATTTGGTAAATATAAAAGTGCAGGAGATCAACTAACCCGTAAAACCATGTCTGAAGATCACCGTGAGATGCTGACTGCATTACTGGATAATATCTATTCAAATTGGCTGGATACAGTATCTTCCGCCAGAGGTAAAAAAAGAACAGATATTGAGAACTTCATAAATGAAGGTGTCTATCAAGTAGACAGACTGAAAGAAGAGGGTTTCCTAACAAGCATACTCTATGATGATGAGGTTATCACTAAGTTGAAGGAGAGACTTCAGGTGAAAACAGACAAAAAACTGCCTGTGGTTGATTTCAGAAAATACTCTGGAGTTAGAAAATGGACTGTTGGAATATCAGGTGGTAAAGATCTGATAGCCGTCATCCGAGCCTCAGGGACCATTCGTCGTACTGAGGGTCCATTTAGTGCCCCTAGCAAAGGTGTTATTGGAGAGAAGTTCATTGAGAAGATCCGTAGGGTCAGAGAGTCAAATAAATTCAAGGCTGCTATTATCCGAATTGACAGTCCAGGAGGTGATGCTCTTGCTTCTGATTTAATGTGGAGAGAAATCAGGCTTCTGGCTGCCAAAAAACCAGTCATTTCTTCAATGTCCGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAGCAGGAGCTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAGCCTTGGGAAACTTTACGAGAAGATTGGTTTCAACAAAGAAATTATATCAAGGGGTTTTAGGAAAAGTTCCTCAATCGAGTTATTGAGTGTGATGATAGTGGATAAAATCCAGTGTGGATTCCACACACATATATTCTCTCTCTCTCTCTCTCTCAAGTACAGGCCACATGAAGCAGAGCTATTTGCCAAGTCTGCACAAAATTTTTATAAACAATTTCGAGATAAGGCGGCTTTTTCCAGATCAATGACTGTAGACAAGATGGAAGAGGTTGCACAGGGGAGGGTTTGGACCGGTAAGGATGCAGCATCCCATGGTTTGGTTGATGCTATTGGTGGGATATCTCGTGCTATTGCTATAGCAAAATTGAAAGCTAATATACCTCAAGACAGACAGGTTACTGTTGTGGAGCTCTCTAGACCTCGTCCTTCTCTACCCGAGATTTTAAGCGGTCTTGGTAATTCTCTGGTTGGAGTGGACGAAACACTCAAGGAACTACTAGAGGACTTGACATTTTCTGATGGAGTTCAAGCGCGAATGGATGGAATCATGTTTCAGAAATTGGAAGGAAATCCATCTGCTAACCCCATTTTGGCATTGATGAAAGATTACCTCAGTTCTACTACATAG
Protein sequence

>Msa1300330

MSLTRSAIHRFRYIISPPITHAFQSQRHRSFLSHPIPIPFHFHSSSYSTLKPDSVAGGRGDENYPTGDFDFKPVTGFNKFLVKLKMLIAFPWERVQHGSILKIILRGQISDQLNNRFSKKGLSLPQICDNLLKAAYDPRISGVYLQIDSLNCGWAKLHEIRRQILNFRKSGKFVVAYVPSCREKEYYIACACEEIYAPPSAYFSLFGFSVQAAFVKGVFDNLGIEPNVEKFGKYKSAGDQLTRKTMSEDHREMLTALLDNIYSNWLDTVSSARGKKRTDIENFINEGVYQVDRLKEEGFLTSILYDDEVITKLKERLQVKTDKKLPVVDFRKYSGVRKWTVGISGGKDLIAVIRASGTIRRTEGPFSAPSKGVIGEKFIEKIRRVRESNKFKAAIIRIDSPGGDALASDLMWREIRLLAAKKPVISSMSDVAASGGYYMAMGAGAIVAESLTLTGSIGVVTGKFSLGKLYEKIGFNKEIISRGFRKSSSIELLSVMIVDKIQCGFHTHIFSLSLSLKYRPHEAELFAKSAQNFYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGISRAIAIAKLKANIPQDRQVTVVELSRPRPSLPEILSGLGNSLVGVDETLKELLEDLTFSDGVQARMDGIMFQKLEGNPSANPILALMKDYLSSTT*