Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307680 | AET03659.2 | 86.184 | 152 | 15 | 1 | 1 | 146 | 64 | 215 | 9.05e-83 | 260 |
| Msa1307680 | AET03659.2 | 89.655 | 58 | 6 | 0 | 147 | 204 | 318 | 375 | 4.35e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307680 | sp|Q9SD07|SSL4_ARATH | 48.052 | 154 | 69 | 3 | 4 | 146 | 58 | 211 | 8.14e-42 | 147 |
| Msa1307680 | sp|Q9SD07|SSL4_ARATH | 50.000 | 58 | 28 | 1 | 144 | 200 | 309 | 366 | 1.53e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307680 | G7LA68 | 86.184 | 152 | 15 | 1 | 1 | 146 | 64 | 215 | 4.32e-83 | 260 |
| Msa1307680 | G7LA68 | 89.655 | 58 | 6 | 0 | 147 | 204 | 318 | 375 | 2.08e-26 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0299660 | Msa1307680 | 0.810856 | 9.361310e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307680 | MtrunA17_Chr8g0370791 | 85.526 | 152 | 16 | 1 | 1 | 146 | 64 | 215 | 6.22e-86 | 258 |
| Msa1307680 | MtrunA17_Chr8g0370791 | 86.207 | 58 | 8 | 0 | 147 | 204 | 318 | 375 | 4.62e-27 | 105 |
| Msa1307680 | MtrunA17_Chr8g0370761 | 81.579 | 152 | 22 | 1 | 1 | 146 | 64 | 215 | 2.40e-82 | 249 |
| Msa1307680 | MtrunA17_Chr8g0370761 | 89.655 | 58 | 6 | 0 | 147 | 204 | 318 | 375 | 1.77e-29 | 112 |
| Msa1307680 | MtrunA17_Chr8g0370771 | 88.608 | 79 | 9 | 0 | 68 | 146 | 2 | 80 | 5.09e-41 | 139 |
| Msa1307680 | MtrunA17_Chr8g0370771 | 89.655 | 58 | 6 | 0 | 147 | 204 | 183 | 240 | 4.87e-31 | 113 |
| Msa1307680 | MtrunA17_Chr8g0370781 | 89.855 | 69 | 7 | 0 | 1 | 69 | 64 | 132 | 1.19e-39 | 132 |
| Msa1307680 | MtrunA17_Chr8g0370801 | 61.446 | 83 | 28 | 1 | 68 | 146 | 1 | 83 | 6.35e-29 | 104 |
| Msa1307680 | MtrunA17_Chr2g0300861 | 37.748 | 151 | 81 | 6 | 6 | 146 | 64 | 211 | 6.64e-21 | 89.0 |
| Msa1307680 | MtrunA17_Chr2g0300841 | 35.099 | 151 | 86 | 5 | 6 | 146 | 52 | 200 | 1.10e-19 | 85.5 |
| Msa1307680 | MtrunA17_Chr2g0300851 | 35.616 | 146 | 84 | 5 | 8 | 146 | 50 | 192 | 1.13e-19 | 85.5 |
| Msa1307680 | MtrunA17_Chr2g0322241 | 33.714 | 175 | 85 | 5 | 3 | 146 | 61 | 235 | 3.02e-17 | 79.0 |
| Msa1307680 | MtrunA17_Chr4g0025341 | 33.333 | 165 | 80 | 5 | 12 | 146 | 67 | 231 | 5.28e-16 | 75.5 |
| Msa1307680 | MtrunA17_Chr8g0376581 | 33.537 | 164 | 79 | 5 | 13 | 146 | 35 | 198 | 1.14e-12 | 65.5 |
| Msa1307680 | MtrunA17_Chr2g0329531 | 29.545 | 176 | 90 | 6 | 10 | 151 | 77 | 252 | 2.74e-12 | 64.7 |
| Msa1307680 | MtrunA17_Chr7g0256581 | 33.133 | 166 | 84 | 6 | 13 | 151 | 51 | 216 | 3.79e-12 | 64.3 |
| Msa1307680 | MtrunA17_Chr7g0256561 | 33.133 | 166 | 84 | 7 | 12 | 150 | 54 | 219 | 3.19e-11 | 61.2 |
| Msa1307680 | MtrunA17_Chr7g0256571 | 30.303 | 165 | 88 | 5 | 13 | 150 | 51 | 215 | 5.63e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307680 | AT3G51420.1 | 48.052 | 154 | 69 | 3 | 4 | 146 | 58 | 211 | 8.27e-43 | 147 |
| Msa1307680 | AT3G51420.1 | 50.000 | 58 | 28 | 1 | 144 | 200 | 309 | 366 | 1.55e-12 | 65.9 |
| Msa1307680 | AT3G51450.1 | 49.351 | 154 | 67 | 3 | 4 | 146 | 58 | 211 | 2.49e-42 | 146 |
| Msa1307680 | AT3G51450.1 | 50.909 | 55 | 26 | 1 | 147 | 200 | 312 | 366 | 2.74e-11 | 62.0 |
| Msa1307680 | AT3G51430.1 | 47.403 | 154 | 70 | 3 | 4 | 146 | 58 | 211 | 3.14e-41 | 143 |
| Msa1307680 | AT3G51430.1 | 58.182 | 55 | 22 | 1 | 147 | 200 | 312 | 366 | 4.35e-15 | 73.2 |
| Msa1307680 | AT3G51430.2 | 47.403 | 154 | 70 | 3 | 4 | 146 | 58 | 211 | 3.32e-41 | 143 |
| Msa1307680 | AT3G51430.2 | 58.182 | 55 | 22 | 1 | 147 | 200 | 310 | 364 | 4.36e-15 | 73.2 |
| Msa1307680 | AT3G51440.1 | 47.403 | 154 | 70 | 3 | 4 | 146 | 58 | 211 | 4.57e-40 | 140 |
| Msa1307680 | AT3G51440.1 | 52.727 | 55 | 25 | 1 | 147 | 200 | 312 | 366 | 5.85e-13 | 67.0 |
| Msa1307680 | AT1G08470.1 | 33.537 | 164 | 80 | 6 | 12 | 146 | 66 | 229 | 5.05e-15 | 73.2 |
| Msa1307680 | AT5G22020.3 | 33.537 | 164 | 80 | 5 | 12 | 146 | 72 | 235 | 6.59e-15 | 72.8 |
| Msa1307680 | AT5G22020.1 | 33.537 | 164 | 80 | 5 | 12 | 146 | 72 | 235 | 6.59e-15 | 72.8 |
| Msa1307680 | AT5G22020.2 | 33.537 | 164 | 80 | 5 | 12 | 146 | 72 | 235 | 6.59e-15 | 72.8 |
| Msa1307680 | AT3G59530.3 | 30.058 | 173 | 87 | 4 | 12 | 150 | 81 | 253 | 1.10e-12 | 66.2 |
| Msa1307680 | AT3G59530.2 | 30.058 | 173 | 87 | 4 | 12 | 150 | 81 | 253 | 1.10e-12 | 66.2 |
| Msa1307680 | AT3G59530.1 | 30.058 | 173 | 87 | 4 | 12 | 150 | 81 | 253 | 1.10e-12 | 66.2 |
| Msa1307680 | AT2G41290.1 | 31.707 | 164 | 82 | 5 | 13 | 147 | 49 | 211 | 1.09e-11 | 63.2 |
| Msa1307680 | AT3G57030.1 | 30.061 | 163 | 87 | 4 | 15 | 150 | 56 | 218 | 6.68e-11 | 60.8 |
Find 53 sgRNAs with CRISPR-Local
Find 738 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGTGGTCAATGAAAATT+TGG | 0.096368 | 8_4:-3564062 | None:intergenic |
| AGAATCCTTGATTGAGTATT+TGG | 0.126660 | 8_4:-3562647 | None:intergenic |
| TTTGTTGTTGTTTAAATTGT+AGG | 0.271192 | 8_4:-3564169 | None:intergenic |
| GCTTTGGGTGTGGTTTATAC+TGG | 0.298198 | 8_4:+3552485 | Msa1307680:CDS |
| GTTGCAAAGGGACAAGTTCT+TGG | 0.298749 | 8_4:+3552437 | Msa1307680:CDS |
| TATGACAAAAGGGTATAAAA+TGG | 0.328459 | 8_4:-3564116 | None:intergenic |
| TTGCTATATGATGCTGCTTT+GGG | 0.340097 | 8_4:+3552470 | Msa1307680:CDS |
| TAGCTCAGAAATCTACCATT+AGG | 0.351349 | 8_4:-3562694 | None:intergenic |
| TTGACCACTGGGATTAAGAT+TGG | 0.354361 | 8_4:+3564073 | Msa1307680:CDS |
| GCATCATATAGCAAATCTTC+AGG | 0.359605 | 8_4:-3552461 | None:intergenic |
| GGATCATAGTAATGTGTTGT+AGG | 0.364483 | 8_4:-3564040 | None:intergenic |
| GTTTGCCTTCTAATATATCT+AGG | 0.365632 | 8_4:-3562672 | None:intergenic |
| TTTGCTATATGATGCTGCTT+TGG | 0.378903 | 8_4:+3552469 | Msa1307680:CDS |
| CATAACAAGAACATGCGATT+AGG | 0.393665 | 8_4:+3552404 | None:intergenic |
| GTTTATACTGGTTGTGAAGA+TGG | 0.402377 | 8_4:+3552497 | Msa1307680:CDS |
| GTTTAAATTGTAGGTAGAGC+AGG | 0.438638 | 8_4:-3564160 | None:intergenic |
| ATGTCAAGACGTATGACAAA+AGG | 0.440499 | 8_4:-3564127 | None:intergenic |
| ATGAATCGGTGGTCGAAGAT+TGG | 0.458042 | 8_4:+3552543 | Msa1307680:CDS |
| TTTATACTGGTTGTGAAGAT+GGG | 0.458125 | 8_4:+3552498 | Msa1307680:CDS |
| TGACCACTGGGATTAAGATT+GGG | 0.462512 | 8_4:+3564074 | Msa1307680:CDS |
| TGCAACAATAAGTGCACCAT+TGG | 0.471976 | 8_4:-3552606 | None:intergenic |
| AGGAGTTATCACTGTGGACT+TGG | 0.473224 | 8_4:+3564009 | Msa1307680:CDS |
| ATATGATGCTGCTTTGGGTG+TGG | 0.478017 | 8_4:+3552475 | Msa1307680:CDS |
| GAGAATAACGGTGAATGAAT+CGG | 0.487769 | 8_4:+3552529 | Msa1307680:CDS |
| CCAGTGGTCAATGAAAATTT+GGG | 0.505659 | 8_4:-3564061 | None:intergenic |
| TCTGTCCTAGATATATTAGA+AGG | 0.514052 | 8_4:+3562667 | Msa1307680:CDS |
| ATATTAGAAGGCAAACCTAA+TGG | 0.516846 | 8_4:+3562679 | Msa1307680:CDS |
| TTCATCCAAATACTCAATCA+AGG | 0.517336 | 8_4:+3562642 | Msa1307680:CDS |
| CTAATATTCAAAATAACAGA+TGG | 0.527880 | 8_4:+3562577 | Msa1307680:CDS |
| TGTCAAGACGTATGACAAAA+GGG | 0.530568 | 8_4:-3564126 | None:intergenic |
| TAATATTCAAAATAACAGAT+GGG | 0.530673 | 8_4:+3562578 | Msa1307680:CDS |
| GGATCTGAAAACGTTGCAAA+GGG | 0.533500 | 8_4:+3552425 | Msa1307680:CDS |
| GTACTTGTGACTGAGATTGA+TGG | 0.533589 | 8_4:+3562553 | Msa1307680:CDS |
| GCAACAATAAGTGCACCATT+GGG | 0.550648 | 8_4:-3552605 | None:intergenic |
| ATACTGGTTGTGAAGATGGG+TGG | 0.569730 | 8_4:+3552501 | Msa1307680:CDS |
| GTTATCACTGTGGACTTGGA+AGG | 0.570869 | 8_4:+3564013 | Msa1307680:CDS |
| GTAGAGGTCACTCACTAGTA+GGG | 0.571038 | 8_4:-3562740 | None:intergenic |
| ATTGGGAATCACATGTATTG+TGG | 0.573834 | 8_4:+3564091 | Msa1307680:CDS |
| CATCATATAGCAAATCTTCA+GGG | 0.573990 | 8_4:-3552460 | None:intergenic |
| AGGATCTGAAAACGTTGCAA+AGG | 0.583976 | 8_4:+3552424 | Msa1307680:CDS |
| GTCGAAGATTGGATTAACAC+AGG | 0.602584 | 8_4:+3552554 | Msa1307680:CDS |
| AATATTCAAAATAACAGATG+GGG | 0.627610 | 8_4:+3562579 | Msa1307680:CDS |
| TGGGTGGATTAAGAGAATAA+CGG | 0.629145 | 8_4:+3552517 | Msa1307680:CDS |
| TGAGTATTTGGATGAAGCGT+CGG | 0.631980 | 8_4:-3562635 | None:intergenic |
| TCGAAGATTGGATTAACACA+GGG | 0.639140 | 8_4:+3552555 | Msa1307680:CDS |
| CTGAATTTGTCAAAGAACGG+AGG | 0.657045 | 8_4:+3563989 | Msa1307680:intron |
| GGGGTTGATGTAGCACATGA+TGG | 0.659959 | 8_4:+3562598 | Msa1307680:CDS |
| AATAACGGTGAATGAATCGG+TGG | 0.682063 | 8_4:+3552532 | Msa1307680:CDS |
| GGATCAAAAGCCAAACCAAG+TGG | 0.693513 | 8_4:-3552584 | None:intergenic |
| ATTCCCAATCTTAATCCCAG+TGG | 0.699708 | 8_4:-3564077 | None:intergenic |
| CGAAGATTGGATTAACACAG+GGG | 0.732019 | 8_4:+3552556 | Msa1307680:CDS |
| GAAGATTGGATTAACACAGG+GGG | 0.746316 | 8_4:+3552557 | Msa1307680:CDS |
| GAACGGAGGAGTTATCACTG+TGG | 0.783679 | 8_4:+3564003 | Msa1307680:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAACTATTTTTTTTTTA+AGG | + | chr8_4:3552682-3552701 | Msa1307680:intron | 10.0% |
| !!! | TTTTTAAGGTAAAAAAATTA+AGG | + | chr8_4:3552696-3552715 | Msa1307680:intron | 10.0% |
| !!! | TTTTAAGGTAAAAAAATTAA+GGG | + | chr8_4:3552697-3552716 | Msa1307680:intron | 10.0% |
| !! | AAAAAAAAAATTGTTTCAAT+TGG | - | chr8_4:3552839-3552858 | None:intergenic | 10.0% |
| !!! | CATTTTAATTTAATTTATGT+GGG | - | chr8_4:3553359-3553378 | None:intergenic | 10.0% |
| !!! | ACATTTTAATTTAATTTATG+TGG | - | chr8_4:3553360-3553379 | None:intergenic | 10.0% |
| !!! | ATAGTTGAAATAAAATTTTA+TGG | + | chr8_4:3555375-3555394 | Msa1307680:intron | 10.0% |
| !! | CACAATAAAAAAAATTAATA+TGG | + | chr8_4:3558683-3558702 | Msa1307680:intron | 10.0% |
| !! | AAATCTACTTATATAATTAA+TGG | - | chr8_4:3559564-3559583 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAGTA+AGG | + | chr8_4:3560291-3560310 | Msa1307680:intron | 10.0% |
| !!! | TTTCATTTTTATTAACTTTT+GGG | - | chr8_4:3562216-3562235 | None:intergenic | 10.0% |
| !!! | AATGATATTTATTAACTTTT+TGG | - | chr8_4:3562289-3562308 | None:intergenic | 10.0% |
| !! | ATACATTATTATTTATTTAG+TGG | + | chr8_4:3562426-3562445 | Msa1307680:intron | 10.0% |
| !! | TACATTATTATTTATTTAGT+GGG | + | chr8_4:3562427-3562446 | Msa1307680:intron | 10.0% |
| !! | TCAATTAAAACATGTTATAT+AGG | + | chr8_4:3553017-3553036 | Msa1307680:intron | 15.0% |
| !!! | TTCAAGACTTTTTTTTTTAA+AGG | - | chr8_4:3553092-3553111 | None:intergenic | 15.0% |
| !!! | TAAAGACAAATAGTTATTTT+CGG | + | chr8_4:3553184-3553203 | Msa1307680:intron | 15.0% |
| !! | ATTAAAATGTTAAAAATCCT+TGG | + | chr8_4:3553370-3553389 | Msa1307680:intron | 15.0% |
| !! | ATTAATTAATGATATGATAC+AGG | + | chr8_4:3553786-3553805 | Msa1307680:intron | 15.0% |
| !! | TTAATTAATGATATGATACA+GGG | + | chr8_4:3553787-3553806 | Msa1307680:intron | 15.0% |
| !! | TTAAAATTCAAATTAACAGA+TGG | + | chr8_4:3553868-3553887 | Msa1307680:intron | 15.0% |
| !! | TAAAATTCAAATTAACAGAT+GGG | + | chr8_4:3553869-3553888 | Msa1307680:intron | 15.0% |
| !!! | TGTAACTGATTTAAATTTTA+TGG | + | chr8_4:3554519-3554538 | Msa1307680:intron | 15.0% |
| !!! | GTAACTGATTTAAATTTTAT+GGG | + | chr8_4:3554520-3554539 | Msa1307680:intron | 15.0% |
| !!! | TAAGATTTTTTTATTTGCAA+AGG | - | chr8_4:3555708-3555727 | None:intergenic | 15.0% |
| !! | TTTGCAAATAAAAAAATCTT+AGG | + | chr8_4:3555707-3555726 | Msa1307680:intron | 15.0% |
| !! | TTGCAAATAAAAAAATCTTA+GGG | + | chr8_4:3555708-3555727 | Msa1307680:intron | 15.0% |
| !! | AATTATGTTATGTACAATTT+AGG | - | chr8_4:3555975-3555994 | None:intergenic | 15.0% |
| !! | TAATAAGTCATATTTCAAAA+AGG | - | chr8_4:3556144-3556163 | None:intergenic | 15.0% |
| !!! | TTTATCTTTGATTTTTCTTT+AGG | + | chr8_4:3556967-3556986 | Msa1307680:intron | 15.0% |
| !!! | ACTTTATCTTTAATTTATGT+GGG | - | chr8_4:3558601-3558620 | Msa1307690:intron | 15.0% |
| !!! | TACTTTATCTTTAATTTATG+TGG | - | chr8_4:3558602-3558621 | Msa1307690:intron | 15.0% |
| !! | AAAATGTAACATAAATAAGA+AGG | + | chr8_4:3558761-3558780 | Msa1307680:intron | 15.0% |
| !!! | ATTTAATCTTTTATGCATAT+TGG | - | chr8_4:3559231-3559250 | None:intergenic | 15.0% |
| !! | TAATGTGAAATTTGTATTTA+TGG | + | chr8_4:3559258-3559277 | Msa1307680:intron | 15.0% |
| !!! | TAGCTTTAACAATTATTTAA+CGG | + | chr8_4:3559341-3559360 | Msa1307680:intron | 15.0% |
| !!! | AGAAATACTTTCTTATTTAA+AGG | + | chr8_4:3559678-3559697 | Msa1307680:intron | 15.0% |
| !!! | AATATGTTTTTTGAGAAAAA+GGG | - | chr8_4:3560732-3560751 | None:intergenic | 15.0% |
| !!! | TTCATTTTTATTAACTTTTG+GGG | - | chr8_4:3562215-3562234 | None:intergenic | 15.0% |
| !!! | CTTTCATTTTTATTAACTTT+TGG | - | chr8_4:3562217-3562236 | None:intergenic | 15.0% |
| !!! | GTTACATTATCATTTTTTTT+TGG | + | chr8_4:3562376-3562395 | Msa1307680:intron | 15.0% |
| !! | TAATATTCAAAATAACAGAT+GGG | + | chr8_4:3562578-3562597 | Msa1307680:CDS | 15.0% |
| !!! | TTGGACTTATTTTTATTTTA+TGG | + | chr8_4:3563228-3563247 | Msa1307680:intron | 15.0% |
| !!! | TGGACTTATTTTTATTTTAT+GGG | + | chr8_4:3563229-3563248 | Msa1307680:intron | 15.0% |
| !!! | CCTATATAACATGTTTTAAT+AGG | - | chr8_4:3552876-3552895 | None:intergenic | 20.0% |
| !! | CCTATTAAAACATGTTATAT+AGG | + | chr8_4:3552873-3552892 | Msa1307680:intron | 20.0% |
| !! | ATATATATATTAGAGTGCAA+TGG | + | chr8_4:3553226-3553245 | Msa1307680:intron | 20.0% |
| !! | ACACAATAACAAAATTTGAT+TGG | - | chr8_4:3553287-3553306 | None:intergenic | 20.0% |
| !! | AAAATTCAAATTAACAGATG+GGG | + | chr8_4:3553870-3553889 | Msa1307680:intron | 20.0% |
| !! | TTCATCAAAATAATCGTATA+AGG | + | chr8_4:3553933-3553952 | Msa1307680:intron | 20.0% |
| !! | GTAACATTTAAACAATTGTT+AGG | + | chr8_4:3554433-3554452 | Msa1307680:intron | 20.0% |
| !! | AAAAACATAACATCCAATTT+AGG | + | chr8_4:3554853-3554872 | Msa1307680:intron | 20.0% |
| !!! | AAAGTGCTAAATATATGTAT+CGG | + | chr8_4:3554917-3554936 | Msa1307680:intron | 20.0% |
| !!! | TATTACAAAAGGGTATAAAA+TGG | - | chr8_4:3555196-3555215 | None:intergenic | 20.0% |
| !!! | ATTTTCGTTGTTTAAATTGT+AGG | - | chr8_4:3555249-3555268 | None:intergenic | 20.0% |
| !! | AATTCTTAGTTTCTTCATAT+AGG | + | chr8_4:3555295-3555314 | Msa1307680:intron | 20.0% |
| !! | TGGTTAGAATTTGATATTTA+AGG | + | chr8_4:3555453-3555472 | Msa1307680:intron | 20.0% |
| !! | CCAATAAATCTTTAAATTGT+GGG | - | chr8_4:3555671-3555690 | None:intergenic | 20.0% |
| !! | ACCAATAAATCTTTAAATTG+TGG | - | chr8_4:3555672-3555691 | None:intergenic | 20.0% |
| !!! | TAATTACATGTTGAAGTTTT+TGG | + | chr8_4:3555788-3555807 | Msa1307680:intron | 20.0% |
| !! | TATTTCAAAAAGGTAGATAA+TGG | - | chr8_4:3556134-3556153 | None:intergenic | 20.0% |
| !! | ACATTCTTATGAGAATTTAT+TGG | - | chr8_4:3556203-3556222 | None:intergenic | 20.0% |
| !!! | AAAAATTTCTTTTACAATCC+AGG | + | chr8_4:3556377-3556396 | Msa1307680:intron | 20.0% |
| !!! | AAAATTTCTTTTACAATCCA+GGG | + | chr8_4:3556378-3556397 | Msa1307680:intron | 20.0% |
| !!! | CATATTTGAAATTGAAAGAT+GGG | - | chr8_4:3556570-3556589 | Msa1307690:CDS | 20.0% |
| !! | AAAAATCAAAGATAAAAGCT+AGG | - | chr8_4:3556963-3556982 | Msa1307690:CDS | 20.0% |
| !! | TTTAATATTACTCACATGTA+TGG | - | chr8_4:3557057-3557076 | Msa1307690:CDS | 20.0% |
| !! | ATATTGTCAAATATGTTCTT+TGG | + | chr8_4:3557240-3557259 | Msa1307680:intron | 20.0% |
| !!! | ATAATGATTTTGATATTGTG+AGG | - | chr8_4:3557509-3557528 | Msa1307690:CDS | 20.0% |
| !! | TATGAAAAACTTATAGCTAT+TGG | - | chr8_4:3557534-3557553 | Msa1307690:CDS | 20.0% |
| !! | ATAGTACAAAAGAAAAATAG+TGG | + | chr8_4:3557961-3557980 | Msa1307680:intron | 20.0% |
| !! | ATTGATCAAGTTATCATTTA+AGG | - | chr8_4:3558073-3558092 | Msa1307690:intron | 20.0% |
| !! | AATGATAACTTGATCAATTA+TGG | + | chr8_4:3558075-3558094 | Msa1307680:intron | 20.0% |
| !!! | AACAATTATGCACATATTTT+TGG | + | chr8_4:3558258-3558277 | Msa1307680:intron | 20.0% |
| !!! | AATAATGAAAAGATTTTCAC+TGG | - | chr8_4:3558298-3558317 | Msa1307690:intron | 20.0% |
| !! | GTTAAAATCATATCTATACA+TGG | - | chr8_4:3558535-3558554 | Msa1307690:intron | 20.0% |
| !!! | AACTTAAATTTTATGTGTGT+TGG | + | chr8_4:3559162-3559181 | Msa1307680:intron | 20.0% |
| !!! | AGCTTTAACAATTATTTAAC+GGG | + | chr8_4:3559342-3559361 | Msa1307680:intron | 20.0% |
| !! | AAATCTTTATATCATTAGCT+GGG | - | chr8_4:3559921-3559940 | None:intergenic | 20.0% |
| !! | TGATATAAAGATTTCATTTG+TGG | + | chr8_4:3559927-3559946 | Msa1307680:intron | 20.0% |
| !! | AAAATGAAGAAAAAGCTTAA+TGG | - | chr8_4:3560057-3560076 | None:intergenic | 20.0% |
| !! | ACTCAATAAGTAATAATAAC+CGG | + | chr8_4:3560234-3560253 | Msa1307680:intron | 20.0% |
| !!! | TTTTTTTTTTGAGTAAGGTT+AGG | + | chr8_4:3560296-3560315 | Msa1307680:intron | 20.0% |
| !!! | TTTTTTTTTGAGTAAGGTTA+GGG | + | chr8_4:3560297-3560316 | Msa1307680:intron | 20.0% |
| !!! | AACTTGCGTTTTAAAAAAAA+CGG | + | chr8_4:3560349-3560368 | Msa1307680:intron | 20.0% |
| !! | TTGTATGAAAGTGATTATAA+TGG | + | chr8_4:3560634-3560653 | Msa1307680:intron | 20.0% |
| !!! | CAATATGTTTTTTGAGAAAA+AGG | - | chr8_4:3560733-3560752 | None:intergenic | 20.0% |
| !!! | TATGAATCTTTATTTTGACT+GGG | - | chr8_4:3560989-3561008 | None:intergenic | 20.0% |
| !!! | ATATGAATCTTTATTTTGAC+TGG | - | chr8_4:3560990-3561009 | None:intergenic | 20.0% |
| !! | AGTCAAAATAAAGATTCATA+TGG | + | chr8_4:3560989-3561008 | Msa1307680:intron | 20.0% |
| !! | CATTTATTAAATGATGTATG+TGG | - | chr8_4:3561150-3561169 | None:intergenic | 20.0% |
| !!! | CATCTGTTATTTTGAATATT+AGG | - | chr8_4:3562579-3562598 | None:intergenic | 20.0% |
| !! | CTAATATTCAAAATAACAGA+TGG | + | chr8_4:3562577-3562596 | Msa1307680:CDS | 20.0% |
| !! | AATATTCAAAATAACAGATG+GGG | + | chr8_4:3562579-3562598 | Msa1307680:CDS | 20.0% |
| !! | TTTATACTTGTATACTAACA+AGG | - | chr8_4:3562843-3562862 | None:intergenic | 20.0% |
| !! | AATAAATTTCCATCAAACTA+AGG | + | chr8_4:3562966-3562985 | Msa1307680:intron | 20.0% |
| !! | ATAAATTTCCATCAAACTAA+GGG | + | chr8_4:3562967-3562986 | Msa1307680:intron | 20.0% |
| !! | TATATAATCGAAACTACATA+GGG | - | chr8_4:3563081-3563100 | None:intergenic | 20.0% |
| !! | TTATATAATCGAAACTACAT+AGG | - | chr8_4:3563082-3563101 | None:intergenic | 20.0% |
| !!! | ACGTGTTTTTTAAGTTTTAT+GGG | - | chr8_4:3563123-3563142 | None:intergenic | 20.0% |
| !!! | AACGTGTTTTTTAAGTTTTA+TGG | - | chr8_4:3563124-3563143 | None:intergenic | 20.0% |
| !!! | AAAAGTGCTAATTATATGTT+GGG | + | chr8_4:3563639-3563658 | Msa1307680:intron | 20.0% |
| !!! | TTGAATGTTTTTTCTGCAAA+TGG | + | chr8_4:3552658-3552677 | Msa1307680:intron | 25.0% |
| ! | TAATTTATGTGGGAAAATGT+GGG | - | chr8_4:3553349-3553368 | None:intergenic | 25.0% |
| ! | TTAATTTATGTGGGAAAATG+TGG | - | chr8_4:3553350-3553369 | None:intergenic | 25.0% |
| ! | TGTTAAAAATCCTTGGATTA+AGG | + | chr8_4:3553377-3553396 | Msa1307680:intron | 25.0% |
| ! | GTTAAAAATCCTTGGATTAA+GGG | + | chr8_4:3553378-3553397 | Msa1307680:intron | 25.0% |
| ! | TCAAAAAAATCCAAAAGAAG+CGG | - | chr8_4:3553405-3553424 | None:intergenic | 25.0% |
| !! | TGAAATAGCTTTTCATTTTG+AGG | - | chr8_4:3553511-3553530 | None:intergenic | 25.0% |
| ! | AATAATCGTATAAGGTTTGA+AGG | + | chr8_4:3553941-3553960 | Msa1307680:intron | 25.0% |
| ! | CAAATCAATAAACAACTTAC+AGG | - | chr8_4:3554106-3554125 | None:intergenic | 25.0% |
| ! | AATAAATTTCCATCAAACTG+AGG | + | chr8_4:3554260-3554279 | Msa1307680:intron | 25.0% |
| ! | ATAAATTTCCATCAAACTGA+GGG | + | chr8_4:3554261-3554280 | Msa1307680:intron | 25.0% |
| ! | TGCAAGAAATATTACATACA+TGG | + | chr8_4:3554562-3554581 | Msa1307680:intron | 25.0% |
| ! | TATCAAGACGTATTACAAAA+GGG | - | chr8_4:3555206-3555225 | None:intergenic | 25.0% |
| ! | ATATCAAGACGTATTACAAA+AGG | - | chr8_4:3555207-3555226 | None:intergenic | 25.0% |
| !!! | ATTTTAGATAGTTTGTAGGA+TGG | - | chr8_4:3555534-3555553 | None:intergenic | 25.0% |
| !!! | CGTTATTTTAGATAGTTTGT+AGG | - | chr8_4:3555538-3555557 | None:intergenic | 25.0% |
| ! | CCCACAATTTAAAGATTTAT+TGG | + | chr8_4:3555668-3555687 | Msa1307680:intron | 25.0% |
| !!! | TGTTTTAAAAGAGAAAGCTA+AGG | - | chr8_4:3555755-3555774 | None:intergenic | 25.0% |
| !!! | TCTAGAACAATGATTGTTTT+AGG | + | chr8_4:3555815-3555834 | Msa1307680:intron | 25.0% |
| !!! | TTTTTAACTCAGGCAAATAA+GGG | - | chr8_4:3555935-3555954 | None:intergenic | 25.0% |
| !!! | ATTTTTAACTCAGGCAAATA+AGG | - | chr8_4:3555936-3555955 | None:intergenic | 25.0% |
| ! | ATTGAGAATCGAATAGATTA+AGG | + | chr8_4:3556106-3556125 | Msa1307680:intron | 25.0% |
| !! | AAATTTCTTTTACAATCCAG+GGG | + | chr8_4:3556379-3556398 | Msa1307680:intron | 25.0% |
| !!! | GATACAAAAGTTTGTTTTGA+GGG | - | chr8_4:3556437-3556456 | Msa1307690:CDS | 25.0% |
| !!! | AGATACAAAAGTTTGTTTTG+AGG | - | chr8_4:3556438-3556457 | Msa1307690:CDS | 25.0% |
| !! | TCTTGAAAAATGACTGTTTT+AGG | + | chr8_4:3556481-3556500 | Msa1307680:intron | 25.0% |
| !! | GCATATTTGAAATTGAAAGA+TGG | - | chr8_4:3556571-3556590 | Msa1307690:CDS | 25.0% |
| ! | TTCAATTTCAAATATGCACA+AGG | + | chr8_4:3556574-3556593 | Msa1307680:intron | 25.0% |
| !!! | ATCTTTGATTTTTCTTTAGG+AGG | + | chr8_4:3556970-3556989 | Msa1307680:intron | 25.0% |
| ! | ATTCGCAATCATATTCAAAA+CGG | + | chr8_4:3557179-3557198 | Msa1307680:intron | 25.0% |
| ! | AAGCATAAAGTAACATACAT+GGG | - | chr8_4:3557216-3557235 | Msa1307690:CDS | 25.0% |
| ! | TAAGCATAAAGTAACATACA+TGG | - | chr8_4:3557217-3557236 | Msa1307690:CDS | 25.0% |
| ! | TCAATGATCATGACTAAAAT+AGG | + | chr8_4:3557600-3557619 | Msa1307680:intron | 25.0% |
| ! | TTAAGGTCATTTGTCTAATT+AGG | - | chr8_4:3558056-3558075 | Msa1307690:intron | 25.0% |
| ! | ATGAGTCTCTATTTATACAT+AGG | + | chr8_4:3558102-3558121 | Msa1307680:intron | 25.0% |
| ! | TGAAAATGAAGAAGATAACA+AGG | + | chr8_4:3558133-3558152 | Msa1307680:intron | 25.0% |
| ! | GAGAGATAAAATGATAGTTA+GGG | - | chr8_4:3558341-3558360 | Msa1307690:intron | 25.0% |
| ! | AGAGAGATAAAATGATAGTT+AGG | - | chr8_4:3558342-3558361 | Msa1307690:intron | 25.0% |
| ! | ATAAGAATCATTCCAACTTT+AGG | + | chr8_4:3558498-3558517 | Msa1307680:intron | 25.0% |
| !!! | TCTTTTTTCACTATTGTGTT+TGG | - | chr8_4:3558734-3558753 | Msa1307690:intron | 25.0% |
| !!! | TGGTTCTTTGAAGTATAATT+GGG | - | chr8_4:3558948-3558967 | Msa1307690:CDS | 25.0% |
| !!! | ATGGTTCTTTGAAGTATAAT+TGG | - | chr8_4:3558949-3558968 | Msa1307690:CDS | 25.0% |
| !! | CATAAACACAAATTTTACAG+CGG | + | chr8_4:3559133-3559152 | Msa1307680:intron | 25.0% |
| ! | TAAACCAATTAACATTGTTG+AGG | - | chr8_4:3559191-3559210 | None:intergenic | 25.0% |
| !! | CAACAATGTTAATTGGTTTA+AGG | + | chr8_4:3559191-3559210 | Msa1307680:intron | 25.0% |
| ! | ATGTATCACATTAAGTGAAA+TGG | - | chr8_4:3559318-3559337 | None:intergenic | 25.0% |
| ! | TTTAACAATTATTTAACGGG+AGG | + | chr8_4:3559345-3559364 | Msa1307680:intron | 25.0% |
| ! | TTAACAATTATTTAACGGGA+GGG | + | chr8_4:3559346-3559365 | Msa1307680:intron | 25.0% |
| !!! | CTCATGTTAGACAATTTTTT+TGG | + | chr8_4:3559382-3559401 | Msa1307680:intron | 25.0% |
| !!! | ATGTTAGACAATTTTTTTGG+TGG | + | chr8_4:3559385-3559404 | Msa1307680:intron | 25.0% |
| ! | TGATTCAAGACTTGAAATAT+TGG | + | chr8_4:3559505-3559524 | Msa1307680:intron | 25.0% |
| !! | TTTAGAAGTACACATTCAAA+AGG | - | chr8_4:3559713-3559732 | None:intergenic | 25.0% |
| ! | TGAATGTGTACTTCTAAATT+TGG | + | chr8_4:3559715-3559734 | Msa1307680:intron | 25.0% |
| ! | TTTGGTTGTCTATATTTAGA+AGG | - | chr8_4:3559767-3559786 | None:intergenic | 25.0% |
| ! | GAAATCTTTATATCATTAGC+TGG | - | chr8_4:3559922-3559941 | None:intergenic | 25.0% |
| ! | GAAGTACATTTACTTAGTTA+GGG | + | chr8_4:3560259-3560278 | Msa1307680:intron | 25.0% |
| !! | GTAAAATATTTTGCCTTGTA+AGG | + | chr8_4:3560319-3560338 | Msa1307680:intron | 25.0% |
| ! | TATGAAAGTGATTATAATGG+AGG | + | chr8_4:3560637-3560656 | Msa1307680:intron | 25.0% |
| !! | GAACTTAAGATTTTGTTGAA+TGG | + | chr8_4:3560883-3560902 | Msa1307680:intron | 25.0% |
| ! | TAGTGAATTAGATGATTTAC+TGG | + | chr8_4:3560948-3560967 | Msa1307680:intron | 25.0% |
| ! | TTCTTCTATGTTTACATAGA+TGG | - | chr8_4:3561018-3561037 | None:intergenic | 25.0% |
| ! | AATGACCACATACATAATTA+GGG | - | chr8_4:3561119-3561138 | None:intergenic | 25.0% |
| ! | TAATGACCACATACATAATT+AGG | - | chr8_4:3561120-3561139 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8_4:3561185-3561204 | Msa1307680:intron | 25.0% |
| ! | CTATAACATAAATTTCTGCA+TGG | - | chr8_4:3561277-3561296 | None:intergenic | 25.0% |
| ! | AAAAATAATTTGGACTGTCA+CGG | - | chr8_4:3561316-3561335 | None:intergenic | 25.0% |
| ! | GGCTCTACATAAAAATAATT+TGG | - | chr8_4:3561326-3561345 | None:intergenic | 25.0% |
| !! | AGAAAACAGTAGGATTTTAT+TGG | + | chr8_4:3561420-3561439 | Msa1307680:intron | 25.0% |
| !! | GAAAACAGTAGGATTTTATT+GGG | + | chr8_4:3561421-3561440 | Msa1307680:intron | 25.0% |
| !!! | TTTTTAATTCACGATGCATT+CGG | - | chr8_4:3561483-3561502 | None:intergenic | 25.0% |
| ! | CAATGTTAAAAGTTTCACAT+CGG | + | chr8_4:3561511-3561530 | Msa1307680:intron | 25.0% |
| ! | TCTGACAATATGTTTATAAG+TGG | + | chr8_4:3561545-3561564 | Msa1307680:intron | 25.0% |
| ! | CTGACAATATGTTTATAAGT+GGG | + | chr8_4:3561546-3561565 | Msa1307680:intron | 25.0% |
| ! | TGACAATATGTTTATAAGTG+GGG | + | chr8_4:3561547-3561566 | Msa1307680:intron | 25.0% |
| ! | GCACAATGTGTTTATAAATA+GGG | + | chr8_4:3561778-3561797 | Msa1307680:intron | 25.0% |
| ! | CACAATGTGTTTATAAATAG+GGG | + | chr8_4:3561779-3561798 | Msa1307680:intron | 25.0% |
| ! | TAAAAAACGGAAAATTGAGA+CGG | + | chr8_4:3561960-3561979 | Msa1307680:intron | 25.0% |
| ! | AATTAGATTAGTGAATGAGT+GGG | - | chr8_4:3562474-3562493 | None:intergenic | 25.0% |
| ! | TAATTAGATTAGTGAATGAG+TGG | - | chr8_4:3562475-3562494 | None:intergenic | 25.0% |
| ! | ATTAATCAATGATATGCTAC+AGG | + | chr8_4:3562495-3562514 | Msa1307680:intron | 25.0% |
| ! | TTAATCAATGATATGCTACA+GGG | + | chr8_4:3562496-3562515 | Msa1307680:intron | 25.0% |
| ! | TAAATTTCCATCAAACTAAG+GGG | + | chr8_4:3562968-3562987 | Msa1307680:intron | 25.0% |
| ! | TGTAGTTTCGATTATATAAC+CGG | + | chr8_4:3563083-3563102 | Msa1307680:intron | 25.0% |
| !!! | CGTGTTTTTTAAGTTTTATG+GGG | - | chr8_4:3563122-3563141 | None:intergenic | 25.0% |
| ! | TGCAAGAAATATTACATACA+TGG | + | chr8_4:3554562-3554581 | Msa1307680:intron | 25.0% |
| ! | AGATTAATCTCTACAATTGT+GGG | + | chr8_4:3563497-3563516 | Msa1307680:intron | 25.0% |
| !!! | AATTGGATGTCACATTTTTT+TGG | - | chr8_4:3563584-3563603 | None:intergenic | 25.0% |
| ! | AAAAATGTGACATCCAATTT+AGG | + | chr8_4:3563585-3563604 | Msa1307680:intron | 25.0% |
| !!! | TCCAATTTAGGTTTTTCTTA+AGG | + | chr8_4:3563597-3563616 | Msa1307680:intron | 25.0% |
| !! | TTTTCTGTTCATTGTACAAA+TGG | - | chr8_4:3563623-3563642 | None:intergenic | 25.0% |
| !!! | GAAAAGTGCTAATTATATGT+TGG | + | chr8_4:3563638-3563657 | Msa1307680:intron | 25.0% |
| ! | TGAGTTACCAATACATATAA+GGG | - | chr8_4:3563845-3563864 | None:intergenic | 25.0% |
| ! | ATGAGTTACCAATACATATA+AGG | - | chr8_4:3563846-3563865 | None:intergenic | 25.0% |
| !! | TATGACAAAAGGGTATAAAA+TGG | - | chr8_4:3564119-3564138 | None:intergenic | 25.0% |
| CATCATATAGCAAATCTTCA+GGG | - | chr8_4:3552463-3552482 | None:intergenic | 30.0% | |
| ! | TTTATACTGGTTGTGAAGAT+GGG | + | chr8_4:3552498-3552517 | Msa1307680:CDS | 30.0% |
| !!! | CACGGTTTTGAAATAAATGT+TGG | + | chr8_4:3552633-3552652 | Msa1307680:intron | 30.0% |
| CAAAAAAATCCAAAAGAAGC+GGG | - | chr8_4:3553404-3553423 | None:intergenic | 30.0% | |
| ! | ACGTAACTTGTCACAATTTA+GGG | - | chr8_4:3553749-3553768 | None:intergenic | 30.0% |
| ! | AACGTAACTTGTCACAATTT+AGG | - | chr8_4:3553750-3553769 | None:intergenic | 30.0% |
| !!! | CGATTATTTTGATGAAGCTA+CGG | - | chr8_4:3553929-3553948 | None:intergenic | 30.0% |
| AACTCAAAAACCTACCATTA+GGG | - | chr8_4:3553970-3553989 | None:intergenic | 30.0% | |
| TAACTCAAAAACCTACCATT+AGG | - | chr8_4:3553971-3553990 | None:intergenic | 30.0% | |
| !! | AAGACCACAAAATTTTGATC+TGG | - | chr8_4:3554064-3554083 | None:intergenic | 30.0% |
| TAAATTTCCATCAAACTGAG+GGG | + | chr8_4:3554262-3554281 | Msa1307680:intron | 30.0% | |
| ! | GGTGTGCTTTATTGAAAATT+AGG | + | chr8_4:3554283-3554302 | Msa1307680:intron | 30.0% |
| CTAGAAATATGCAAGTAACA+AGG | - | chr8_4:3554315-3554334 | None:intergenic | 30.0% | |
| !! | TGCATATTTCTAGATGTTGT+TGG | + | chr8_4:3554322-3554341 | Msa1307680:intron | 30.0% |
| !!! | TTTCTGTGCTTCCTTTTTTT+GGG | - | chr8_4:3554588-3554607 | None:intergenic | 30.0% |
| ! | TTTTCTGTGCTTCCTTTTTT+TGG | - | chr8_4:3554589-3554608 | None:intergenic | 30.0% |
| CCATCATAATGAATGTTATC+AGG | - | chr8_4:3554634-3554653 | None:intergenic | 30.0% | |
| CCTGATAACATTCATTATGA+TGG | + | chr8_4:3554631-3554650 | Msa1307680:intron | 30.0% | |
| !! | AACATTCATTATGATGGACA+TGG | + | chr8_4:3554637-3554656 | Msa1307680:intron | 30.0% |
| !! | ACATTCATTATGATGGACAT+GGG | + | chr8_4:3554638-3554657 | Msa1307680:intron | 30.0% |
| !! | TCCAATTTAGGTGTTTTTGA+AGG | + | chr8_4:3554865-3554884 | Msa1307680:intron | 30.0% |
| CCTTGTATAGAGACTATTTA+TGG | - | chr8_4:3554891-3554910 | None:intergenic | 30.0% | |
| CCATAAATAGTCTCTATACA+AGG | + | chr8_4:3554888-3554907 | Msa1307680:intron | 30.0% | |
| !! | TGTTGTTGTTTGTGTATTTC+AGG | + | chr8_4:3554956-3554975 | Msa1307680:intron | 30.0% |
| TTCTTGTACAAATTCAGACT+TGG | - | chr8_4:3555063-3555082 | None:intergenic | 30.0% | |
| AGTCTGAATTTGTACAAGAA+CGG | + | chr8_4:3555063-3555082 | Msa1307680:intron | 30.0% | |
| TCTTAGTTTCTTCATATAGG+TGG | + | chr8_4:3555298-3555317 | Msa1307680:intron | 30.0% | |
| CTTAGTTTCTTCATATAGGT+GGG | + | chr8_4:3555299-3555318 | Msa1307680:intron | 30.0% | |
| ! | ATATTTAAGGTGATCAAGTG+AGG | + | chr8_4:3555466-3555485 | Msa1307680:intron | 30.0% |
| ! | GGAATTGGAGATCTAAAATT+CGG | + | chr8_4:3555487-3555506 | Msa1307680:intron | 30.0% |
| GGTAGAACATTATATATGCA+AGG | - | chr8_4:3555513-3555532 | None:intergenic | 30.0% | |
| TTGTGGGATACAACATAAAA+GGG | - | chr8_4:3555655-3555674 | None:intergenic | 30.0% | |
| ATTGTGGGATACAACATAAA+AGG | - | chr8_4:3555656-3555675 | None:intergenic | 30.0% | |
| ! | AAGAAATAACCAACTTTTGC+AGG | - | chr8_4:3555864-3555883 | None:intergenic | 30.0% |
| ! | CATATTTGAAGTTCAAAGAG+TGG | - | chr8_4:3555893-3555912 | None:intergenic | 30.0% |
| TTGAACTTCAAATATGCACA+AGG | + | chr8_4:3555897-3555916 | Msa1307680:intron | 30.0% | |
| AATTTAGGAGTAAGTAAGTG+AGG | - | chr8_4:3555960-3555979 | None:intergenic | 30.0% | |
| ! | TTCTTGTTTGAAAGTAGACT+TGG | - | chr8_4:3556013-3556032 | None:intergenic | 30.0% |
| ! | GATAGTTCTGCATCATATTT+GGG | - | chr8_4:3556067-3556086 | None:intergenic | 30.0% |
| ! | TGATAGTTCTGCATCATATT+TGG | - | chr8_4:3556068-3556087 | None:intergenic | 30.0% |
| ! | CAGAACTATCATTGATTAGT+GGG | + | chr8_4:3556077-3556096 | Msa1307680:intron | 30.0% |
| !! | ACATCCAATTTGTTAGTTCT+CGG | + | chr8_4:3556228-3556247 | Msa1307680:intron | 30.0% |
| ! | ATCTTACCTGTTGAAGTTTT+CGG | + | chr8_4:3556454-3556473 | Msa1307680:intron | 30.0% |
| TTGAAGGACATAATAGTATC+CGG | - | chr8_4:3556706-3556725 | Msa1307690:CDS | 30.0% | |
| ATACTATTATGTCCTTCAAC+CGG | + | chr8_4:3556707-3556726 | Msa1307680:intron | 30.0% | |
| TATGATTGCGAATTCTACAT+TGG | - | chr8_4:3557172-3557191 | Msa1307690:CDS | 30.0% | |
| GACTTTCCTTAGACAAATAT+TGG | + | chr8_4:3557266-3557285 | Msa1307680:intron | 30.0% | |
| TTGGAACCAATATTTGTCTA+AGG | - | chr8_4:3557275-3557294 | Msa1307690:CDS | 30.0% | |
| CATTATTTCATGCTAATGGT+TGG | - | chr8_4:3557326-3557345 | Msa1307690:CDS | 30.0% | |
| CAACCATTAGCATGAAATAA+TGG | + | chr8_4:3557324-3557343 | Msa1307680:intron | 30.0% | |
| GTTCCATTATTTCATGCTAA+TGG | - | chr8_4:3557330-3557349 | Msa1307690:CDS | 30.0% | |
| GTAAGTATAAATTACACCTC+TGG | - | chr8_4:3557465-3557484 | Msa1307690:CDS | 30.0% | |
| GAGGTGTAATTTATACTTAC+AGG | + | chr8_4:3557465-3557484 | Msa1307680:intron | 30.0% | |
| AAATATGGTTTCAGTCCTAT+TGG | - | chr8_4:3557721-3557740 | Msa1307690:CDS | 30.0% | |
| ! | TGAATTAAGAGTACAGAGAA+TGG | + | chr8_4:3557752-3557771 | Msa1307680:intron | 30.0% |
| ! | GTTTCATGTTGATTGTAAAC+AGG | - | chr8_4:3557844-3557863 | Msa1307690:intron | 30.0% |
| ! | GGTGTTAAGTTTTCAGAAAT+TGG | - | chr8_4:3558011-3558030 | Msa1307690:intron | 30.0% |
| AAGAAGATAACAAGGATAGT+AGG | + | chr8_4:3558141-3558160 | Msa1307680:intron | 30.0% | |
| !!! | GCACATATTTTTGGAAACAA+TGG | + | chr8_4:3558267-3558286 | Msa1307680:intron | 30.0% |
| AAATGATAGTTAGGGTCTTA+GGG | - | chr8_4:3558333-3558352 | Msa1307690:intron | 30.0% | |
| AAAATGATAGTTAGGGTCTT+AGG | - | chr8_4:3558334-3558353 | Msa1307690:intron | 30.0% | |
| TTTATCTCTCTTCATGACAA+TGG | + | chr8_4:3558351-3558370 | Msa1307680:intron | 30.0% | |
| AAAATCAGTTTGTAAGTGAG+AGG | - | chr8_4:3558650-3558669 | Msa1307690:intron | 30.0% | |
| ! | TTTTTCACTATTGTGTTTGG+TGG | - | chr8_4:3558731-3558750 | Msa1307690:intron | 30.0% |
| ! | TAGGGTGATAGTAATGTTTT+AGG | - | chr8_4:3558795-3558814 | Msa1307690:intron | 30.0% |
| !! | GGTTCTTTGAAGTATAATTG+GGG | - | chr8_4:3558947-3558966 | Msa1307690:CDS | 30.0% |
| !!! | ACTTGTTACTTTTTTCAGGA+CGG | - | chr8_4:3559097-3559116 | None:intergenic | 30.0% |
| !!! | CATCACTTGTTACTTTTTTC+AGG | - | chr8_4:3559101-3559120 | None:intergenic | 30.0% |
| ATTTGTGTTTATGATGTTCC+AGG | - | chr8_4:3559126-3559145 | None:intergenic | 30.0% | |
| TATCACATTAAGTGAAATGG+TGG | - | chr8_4:3559315-3559334 | None:intergenic | 30.0% | |
| !!! | TTAGACAATTTTTTTGGTGG+TGG | + | chr8_4:3559388-3559407 | Msa1307680:intron | 30.0% |
| AGACAACCAAAAATACTTGA+AGG | + | chr8_4:3559776-3559795 | Msa1307680:intron | 30.0% | |
| ! | TTCAAGCCTTCAAGTATTTT+TGG | - | chr8_4:3559785-3559804 | None:intergenic | 30.0% |
| TTGAGAGCCAAAATGAAAAA+TGG | + | chr8_4:3559806-3559825 | Msa1307680:intron | 30.0% | |
| ATGTCAATCAAGATCAAGAT+GGG | + | chr8_4:3559850-3559869 | Msa1307680:intron | 30.0% | |
| ! | CTTTTAATGCCTTCACATAA+AGG | + | chr8_4:3559997-3560016 | Msa1307680:intron | 30.0% |
| AGAAAAAGCTTAATGGTGTT+TGG | - | chr8_4:3560050-3560069 | None:intergenic | 30.0% | |
| CGAAGTACATTTACTTAGTT+AGG | + | chr8_4:3560258-3560277 | Msa1307680:intron | 30.0% | |
| !!! | AAAACGGCTGTATCTTTTTT+TGG | + | chr8_4:3560365-3560384 | Msa1307680:intron | 30.0% |
| ATACAACACCTCCATTATAA+TGG | - | chr8_4:3560620-3560639 | None:intergenic | 30.0% | |
| TTTAACATAGCCATCCAAAA+TGG | - | chr8_4:3560852-3560871 | None:intergenic | 30.0% | |
| GAATGGTGAAATTAAAGTTG+TGG | + | chr8_4:3560900-3560919 | Msa1307680:intron | 30.0% | |
| !!! | AATATGGACCCCTTTTTTTA+AGG | - | chr8_4:3561089-3561108 | None:intergenic | 30.0% |
| AAATGACTTGAGAAAACAGT+AGG | + | chr8_4:3561410-3561429 | Msa1307680:intron | 30.0% | |
| !! | TTTTAATTCACGATGCATTC+GGG | - | chr8_4:3561482-3561501 | None:intergenic | 30.0% |
| GACAATATGTTTATAAGTGG+GGG | + | chr8_4:3561548-3561567 | Msa1307680:intron | 30.0% | |
| GGCACAATGTGTTTATAAAT+AGG | + | chr8_4:3561777-3561796 | Msa1307680:intron | 30.0% | |
| AAAAAACGGAAAATTGAGAC+GGG | + | chr8_4:3561961-3561980 | Msa1307680:intron | 30.0% | |
| ! | ATACTTCCATGACATAGTTT+TGG | + | chr8_4:3562000-3562019 | Msa1307680:intron | 30.0% |
| TCTTTCTTGCGTTAAATCAT+TGG | + | chr8_4:3562338-3562357 | Msa1307680:intron | 30.0% | |
| TTCATCCAAATACTCAATCA+AGG | + | chr8_4:3562642-3562661 | Msa1307680:CDS | 30.0% | |
| AGAATCCTTGATTGAGTATT+TGG | - | chr8_4:3562650-3562669 | None:intergenic | 30.0% | |
| TCTGTCCTAGATATATTAGA+AGG | + | chr8_4:3562667-3562686 | Msa1307680:CDS | 30.0% | |
| GTTTGCCTTCTAATATATCT+AGG | - | chr8_4:3562675-3562694 | None:intergenic | 30.0% | |
| ATATTAGAAGGCAAACCTAA+TGG | + | chr8_4:3562679-3562698 | Msa1307680:CDS | 30.0% | |
| !! | AAGACGACAAAATTTTGATC+CGG | - | chr8_4:3562790-3562809 | None:intergenic | 30.0% |
| AAGGTGATAAACAACTTACA+TGG | - | chr8_4:3562824-3562843 | None:intergenic | 30.0% | |
| ! | GGTGTGCTTTATTGAAATTT+GGG | + | chr8_4:3562989-3563008 | Msa1307680:intron | 30.0% |
| ! | TTAGAAGTATGCAAGTAACA+TGG | - | chr8_4:3563021-3563040 | None:intergenic | 30.0% |
| !!! | TCAGATTTTAGAATCCGAAT+AGG | + | chr8_4:3563152-3563171 | Msa1307680:intron | 30.0% |
| !!! | CAGATTTTAGAATCCGAATA+GGG | + | chr8_4:3563153-3563172 | Msa1307680:intron | 30.0% |
| GACCTACTTCTAAATGTTAT+TGG | + | chr8_4:3563209-3563228 | Msa1307680:intron | 30.0% | |
| GTCCAATAACATTTAGAAGT+AGG | - | chr8_4:3563214-3563233 | None:intergenic | 30.0% | |
| ! | ATTTTATGGGATAATGTTGC+AGG | + | chr8_4:3563242-3563261 | Msa1307680:intron | 30.0% |
| !!! | TTTCTGTGCTACCTTTTTTT+GGG | - | chr8_4:3563297-3563316 | None:intergenic | 30.0% |
| ! | TTTTCTGTGCTACCTTTTTT+TGG | - | chr8_4:3563298-3563317 | None:intergenic | 30.0% |
| CCATCATAATGAATGTTATC+AGG | - | chr8_4:3554634-3554653 | None:intergenic | 30.0% | |
| CCTGATAACATTCATTATGA+TGG | + | chr8_4:3554631-3554650 | Msa1307680:intron | 30.0% | |
| !! | AACATTCATTATGATGGACA+TGG | + | chr8_4:3554637-3554656 | Msa1307680:intron | 30.0% |
| !! | ACATTCATTATGATGGACAT+GGG | + | chr8_4:3554638-3554657 | Msa1307680:intron | 30.0% |
| GAGATTAATCTCTACAATTG+TGG | + | chr8_4:3563496-3563515 | Msa1307680:intron | 30.0% | |
| GCCTTAAGAAAAACCTAAAT+TGG | - | chr8_4:3563601-3563620 | None:intergenic | 30.0% | |
| ATGCTAACATGTGTCTATAA+AGG | - | chr8_4:3563820-3563839 | None:intergenic | 30.0% | |
| AGCATTTCCCTTATATGTAT+TGG | + | chr8_4:3563835-3563854 | Msa1307680:intron | 30.0% | |
| AGTCTGAATTTGTCAAAGAA+CGG | + | chr8_4:3563986-3564005 | Msa1307680:intron | 30.0% | |
| GCATCATATAGCAAATCTTC+AGG | - | chr8_4:3552464-3552483 | None:intergenic | 35.0% | |
| ! | TTTGCTATATGATGCTGCTT+TGG | + | chr8_4:3552469-3552488 | Msa1307680:CDS | 35.0% |
| !! | TTGCTATATGATGCTGCTTT+GGG | + | chr8_4:3552470-3552489 | Msa1307680:CDS | 35.0% |
| ! | GTTTATACTGGTTGTGAAGA+TGG | + | chr8_4:3552497-3552516 | Msa1307680:CDS | 35.0% |
| !! | TGGGTGGATTAAGAGAATAA+CGG | + | chr8_4:3552517-3552536 | Msa1307680:CDS | 35.0% |
| GAGAATAACGGTGAATGAAT+CGG | + | chr8_4:3552529-3552548 | Msa1307680:CDS | 35.0% | |
| TCGAAGATTGGATTAACACA+GGG | + | chr8_4:3552555-3552574 | Msa1307680:CDS | 35.0% | |
| !!! | AGGGTTGTCTTTTTTGTTGA+TGG | - | chr8_4:3553998-3554017 | None:intergenic | 35.0% |
| CAACTACATTAGGAAAGTAG+AGG | - | chr8_4:3554033-3554052 | None:intergenic | 35.0% | |
| ! | CTCACCAGATCAAAATTTTG+TGG | + | chr8_4:3554057-3554076 | Msa1307680:intron | 35.0% |
| !! | ATTTTATGGGCTAATGTTGC+AGG | + | chr8_4:3554533-3554552 | Msa1307680:intron | 35.0% |
| TACATACATGGCCCAAAAAA+AGG | + | chr8_4:3554574-3554593 | Msa1307680:intron | 35.0% | |
| !!! | CAAAGTTTTGTTGTTCCTTG+TGG | + | chr8_4:3554749-3554768 | Msa1307680:intron | 35.0% |
| !! | TCGAGTTGAATATAACCACA+AGG | - | chr8_4:3554767-3554786 | None:intergenic | 35.0% |
| GCCTTCAAAAACACCTAAAT+TGG | - | chr8_4:3554869-3554888 | None:intergenic | 35.0% | |
| TATGTCCAGTTCAAGAGAAA+AGG | - | chr8_4:3554986-3555005 | None:intergenic | 35.0% | |
| TGCTCAAATACCCTTTCATT+AGG | + | chr8_4:3555007-3555026 | Msa1307680:intron | 35.0% | |
| CAAATACCCTTTCATTAGGA+AGG | + | chr8_4:3555011-3555030 | Msa1307680:intron | 35.0% | |
| GATCCAAAATTATCACTGAC+TGG | + | chr8_4:3555135-3555154 | Msa1307680:intron | 35.0% | |
| ! | CAAAATTATCACTGACTGGT+GGG | + | chr8_4:3555139-3555158 | Msa1307680:intron | 35.0% |
| ATTGGGAATCACTTATACTG+TGG | + | chr8_4:3555168-3555187 | Msa1307680:intron | 35.0% | |
| TACAACATAAAAGGGAAGAG+AGG | - | chr8_4:3555647-3555666 | None:intergenic | 35.0% | |
| !! | AAGTGAGGCATTTTTAACTC+AGG | - | chr8_4:3555945-3555964 | None:intergenic | 35.0% |
| ! | GCAGAACTATCATTGATTAG+TGG | + | chr8_4:3556076-3556095 | Msa1307680:intron | 35.0% |
| !! | CATCCAATTTGTTAGTTCTC+GGG | + | chr8_4:3556229-3556248 | Msa1307680:intron | 35.0% |
| !! | ATCCAATTTGTTAGTTCTCG+GGG | + | chr8_4:3556230-3556249 | Msa1307680:intron | 35.0% |
| TCAAATATGCACAAGGAGTT+TGG | + | chr8_4:3555904-3555923 | Msa1307680:intron | 35.0% | |
| TGAAGGACATAATAGTATCC+GGG | - | chr8_4:3556705-3556724 | Msa1307690:CDS | 35.0% | |
| GTTACATCGAAATCAAAGAC+CGG | - | chr8_4:3556729-3556748 | Msa1307690:CDS | 35.0% | |
| !! | AAAGATGGTTGGTTTCATAG+TGG | - | chr8_4:3556778-3556797 | Msa1307690:CDS | 35.0% |
| !! | AAGAAGCATTCAAAGATGGT+TGG | - | chr8_4:3556789-3556808 | Msa1307690:CDS | 35.0% |
| !! | ACAGAAGAAGCATTCAAAGA+TGG | - | chr8_4:3556793-3556812 | Msa1307690:CDS | 35.0% |
| TTGGTGAGGTAATGTTTAGA+GGG | - | chr8_4:3556855-3556874 | Msa1307690:CDS | 35.0% | |
| TTCAACAATGGATAGTGTTC+CGG | - | chr8_4:3556893-3556912 | Msa1307690:CDS | 35.0% | |
| TGTCAAAGATCCTTCAACAA+TGG | - | chr8_4:3556905-3556924 | Msa1307690:CDS | 35.0% | |
| TCAAAGATAAAAGCTAGGCA+AGG | - | chr8_4:3556958-3556977 | Msa1307690:CDS | 35.0% | |
| !! | CTTTCGATGATGGAAGAAAA+TGG | - | chr8_4:3557081-3557100 | Msa1307690:CDS | 35.0% |
| !! | TCCATCATCGAAAGTATTTG+TGG | + | chr8_4:3557087-3557106 | Msa1307680:intron | 35.0% |
| !! | ATCATCGAAAGTATTTGTGG+CGG | + | chr8_4:3557090-3557109 | Msa1307680:intron | 35.0% |
| TAGAAAACTGCTCAATCACA+AGG | - | chr8_4:3557145-3557164 | Msa1307690:CDS | 35.0% | |
| ! | GTGATTGAGCAGTTTTCTAT+CGG | + | chr8_4:3557146-3557165 | Msa1307680:intron | 35.0% |
| GCAATCATATTCAAAACGGT+AGG | + | chr8_4:3557183-3557202 | Msa1307680:intron | 35.0% | |
| CATAAAGTAACATACATGGG+AGG | - | chr8_4:3557213-3557232 | Msa1307690:CDS | 35.0% | |
| GGAACATTCCAAAGATAAAC+AGG | + | chr8_4:3557345-3557364 | Msa1307680:intron | 35.0% | |
| TCCAAAGATAAACAGGAAAG+AGG | + | chr8_4:3557352-3557371 | Msa1307680:intron | 35.0% | |
| CCAAAGATAAACAGGAAAGA+GGG | + | chr8_4:3557353-3557372 | Msa1307680:intron | 35.0% | |
| CTGAAACCATATTTGCATCA+AGG | + | chr8_4:3557727-3557746 | Msa1307680:intron | 35.0% | |
| TCATTTGTCTAATTAGGTGG+TGG | - | chr8_4:3558050-3558069 | Msa1307690:intron | 35.0% | |
| AGGTCATTTGTCTAATTAGG+TGG | - | chr8_4:3558053-3558072 | Msa1307690:intron | 35.0% | |
| GTTCATGCAATTCCTAAAGT+TGG | - | chr8_4:3558513-3558532 | Msa1307690:intron | 35.0% | |
| CTATCACTGTTCTCACTTTA+GGG | - | chr8_4:3558813-3558832 | Msa1307690:intron | 35.0% | |
| TCTATCACTGTTCTCACTTT+AGG | - | chr8_4:3558814-3558833 | Msa1307690:intron | 35.0% | |
| GACAGAACATCACTTGTTTA+TGG | - | chr8_4:3558968-3558987 | Msa1307690:CDS | 35.0% | |
| TTTGTCACCTATCAACTTCT+TGG | - | chr8_4:3559014-3559033 | Msa1307690:CDS | 35.0% | |
| !! | AAGAAGTTGATAGGTGACAA+AGG | + | chr8_4:3559013-3559032 | Msa1307680:intron | 35.0% |
| AAAGTAACAAGTGATGATCC+TGG | + | chr8_4:3559105-3559124 | Msa1307680:intron | 35.0% | |
| TATGCATATTGGACTTTCGT+CGG | - | chr8_4:3559220-3559239 | None:intergenic | 35.0% | |
| CATAATATATGCAAAGTCCG+CGG | - | chr8_4:3559426-3559445 | None:intergenic | 35.0% | |
| GATGTCAATCAAGATCAAGA+TGG | + | chr8_4:3559849-3559868 | Msa1307680:intron | 35.0% | |
| TTCTGTATACGTACTAGTTC+AGG | + | chr8_4:3560075-3560094 | Msa1307680:intron | 35.0% | |
| !! | GTTCTGAAAAAGAGTACGTA+AGG | - | chr8_4:3560141-3560160 | None:intergenic | 35.0% |
| CTAAGTAAATGTACTTCGTC+CGG | - | chr8_4:3560256-3560275 | None:intergenic | 35.0% | |
| !! | CAAGTTGTTTTCACCTTACA+AGG | - | chr8_4:3560335-3560354 | None:intergenic | 35.0% |
| ATAGGTGGTTTCAGAATCAA+CGG | - | chr8_4:3560557-3560576 | None:intergenic | 35.0% | |
| GATAAAACGTCATGAATAGG+TGG | - | chr8_4:3560572-3560591 | None:intergenic | 35.0% | |
| ! | TTTTATCCGCTTAACATCCT+CGG | + | chr8_4:3560585-3560604 | Msa1307680:intron | 35.0% |
| GTAGCAATTGAATCTCAGTT+TGG | + | chr8_4:3560794-3560813 | Msa1307680:intron | 35.0% | |
| ! | AAATTAAAGTTGTGGTGACG+AGG | + | chr8_4:3560908-3560927 | Msa1307680:intron | 35.0% |
| GCTAAATGACCTACAATAGT+GGG | - | chr8_4:3561050-3561069 | None:intergenic | 35.0% | |
| TGCTAAATGACCTACAATAG+TGG | - | chr8_4:3561051-3561070 | None:intergenic | 35.0% | |
| CTATTGTAGGTCATTTAGCA+AGG | + | chr8_4:3561051-3561070 | Msa1307680:intron | 35.0% | |
| TATGGGTGGTCCTTAAAAAA+AGG | + | chr8_4:3561076-3561095 | Msa1307680:intron | 35.0% | |
| ATGGGTGGTCCTTAAAAAAA+GGG | + | chr8_4:3561077-3561096 | Msa1307680:intron | 35.0% | |
| AAAAAAGGGGTCCATATTAG+AGG | + | chr8_4:3561091-3561110 | Msa1307680:intron | 35.0% | |
| TAATTAGGGAGCCTCTAATA+TGG | - | chr8_4:3561105-3561124 | None:intergenic | 35.0% | |
| CTCAAAAACAATATACCCTC+CGG | - | chr8_4:3561207-3561226 | None:intergenic | 35.0% | |
| ACCACTTAGAAATTGTGGTT+GGG | - | chr8_4:3561616-3561635 | None:intergenic | 35.0% | |
| TACCACTTAGAAATTGTGGT+TGG | - | chr8_4:3561617-3561636 | None:intergenic | 35.0% | |
| CTGATACCACTTAGAAATTG+TGG | - | chr8_4:3561621-3561640 | None:intergenic | 35.0% | |
| TGCTATTAGGTTTCCGTTAT+CGG | + | chr8_4:3561669-3561688 | Msa1307680:intron | 35.0% | |
| ATCTCACATCGAATATGAGA+TGG | + | chr8_4:3561756-3561775 | Msa1307680:intron | 35.0% | |
| TTAAAGAGATGCACCCTATA+AGG | - | chr8_4:3561855-3561874 | None:intergenic | 35.0% | |
| AAAAAAGAGGAGTAGCACTT+TGG | - | chr8_4:3562155-3562174 | None:intergenic | 35.0% | |
| !!! | AAAGTGCTACTCCTCTTTTT+TGG | + | chr8_4:3562154-3562173 | Msa1307680:intron | 35.0% |
| !!! | AAGTGCTACTCCTCTTTTTT+GGG | + | chr8_4:3562155-3562174 | Msa1307680:intron | 35.0% |
| !! | TTAACTTTTGGGGACTTCTA+TGG | - | chr8_4:3562205-3562224 | None:intergenic | 35.0% |
| TAGCTCAGAAATCTACCATT+AGG | - | chr8_4:3562697-3562716 | None:intergenic | 35.0% | |
| !!! | AGGGTTGTCTTTTTTGTTGA+TGG | - | chr8_4:3553998-3554017 | None:intergenic | 35.0% |
| GTGATAAACAACTTACATGG+AGG | - | chr8_4:3562821-3562840 | None:intergenic | 35.0% | |
| ! | GGGTGTGCTTTATTGAAATT+TGG | + | chr8_4:3562988-3563007 | Msa1307680:intron | 35.0% |
| TACATACATGGCCCAAAAAA+AGG | + | chr8_4:3554574-3554593 | Msa1307680:intron | 35.0% | |
| TTCACTTAGAGCACATGTTA+AGG | + | chr8_4:3563675-3563694 | Msa1307680:intron | 35.0% | |
| GTTTGTGTATTTCTTCTGTC+AGG | + | chr8_4:3563883-3563902 | Msa1307680:intron | 35.0% | |
| TGCTCAAATACCCTTTCATT+AGG | + | chr8_4:3555007-3555026 | Msa1307680:intron | 35.0% | |
| CAAATACCCTTTCATTAGGA+AGG | + | chr8_4:3555011-3555030 | Msa1307680:intron | 35.0% | |
| GGATCATAGTAATGTGTTGT+AGG | - | chr8_4:3564043-3564062 | None:intergenic | 35.0% | |
| CCAGTGGTCAATGAAAATTT+GGG | - | chr8_4:3564064-3564083 | None:intergenic | 35.0% | |
| ! | CCAAATTTTCATTGACCACT+GGG | + | chr8_4:3564062-3564081 | Msa1307680:CDS | 35.0% |
| ATTGGGAATCACATGTATTG+TGG | + | chr8_4:3564091-3564110 | Msa1307680:CDS | 35.0% | |
| TGTCAAGACGTATGACAAAA+GGG | - | chr8_4:3564129-3564148 | None:intergenic | 35.0% | |
| ATGTCAAGACGTATGACAAA+AGG | - | chr8_4:3564130-3564149 | None:intergenic | 35.0% | |
| AGGATCTGAAAACGTTGCAA+AGG | + | chr8_4:3552424-3552443 | Msa1307680:CDS | 40.0% | |
| GGATCTGAAAACGTTGCAAA+GGG | + | chr8_4:3552425-3552444 | Msa1307680:CDS | 40.0% | |
| AATAACGGTGAATGAATCGG+TGG | + | chr8_4:3552532-3552551 | Msa1307680:CDS | 40.0% | |
| GTCGAAGATTGGATTAACAC+AGG | + | chr8_4:3552554-3552573 | Msa1307680:CDS | 40.0% | |
| CGAAGATTGGATTAACACAG+GGG | + | chr8_4:3552556-3552575 | Msa1307680:CDS | 40.0% | |
| GAAGATTGGATTAACACAGG+GGG | + | chr8_4:3552557-3552576 | Msa1307680:CDS | 40.0% | |
| GCAACAATAAGTGCACCATT+GGG | - | chr8_4:3552608-3552627 | None:intergenic | 40.0% | |
| TGCAACAATAAGTGCACCAT+TGG | - | chr8_4:3552609-3552628 | None:intergenic | 40.0% | |
| GTACTTGTGACAGAGATTGA+TGG | + | chr8_4:3553844-3553863 | Msa1307680:intron | 40.0% | |
| GAGATTAATCTCTGCAGTTG+TGG | + | chr8_4:3554787-3554806 | Msa1307680:intron | 40.0% | |
| CAGTTGTGGACAGAAGATAA+GGG | + | chr8_4:3554801-3554820 | Msa1307680:intron | 40.0% | |
| GTTGTTTGTGTATTTCAGGC+AGG | + | chr8_4:3554960-3554979 | Msa1307680:intron | 40.0% | |
| CTGAATTTGTACAAGAACGG+AGG | + | chr8_4:3555066-3555085 | Msa1307680:intron | 40.0% | |
| GGATCATAGTAGTGTGTAGT+AGG | - | chr8_4:3555120-3555139 | None:intergenic | 40.0% | |
| ! | CCACCAGTCAGTGATAATTT+TGG | - | chr8_4:3555141-3555160 | None:intergenic | 40.0% |
| ! | CCAAAATTATCACTGACTGG+TGG | + | chr8_4:3555138-3555157 | Msa1307680:intron | 40.0% |
| TGACTGGTGGGATAAAGATT+GGG | + | chr8_4:3555151-3555170 | Msa1307680:intron | 40.0% | |
| AGTTTCTTCATATAGGTGGG+TGG | + | chr8_4:3555302-3555321 | Msa1307680:intron | 40.0% | |
| GGCATGAATATAGGTTCTTG+TGG | + | chr8_4:3555323-3555342 | Msa1307680:intron | 40.0% | |
| AAGGTGATCAAGTGAGGAAT+TGG | + | chr8_4:3555472-3555491 | Msa1307680:intron | 40.0% | |
| AGAAGAGATGAGAGAGAGTT+GGG | - | chr8_4:3555606-3555625 | None:intergenic | 40.0% | |
| TAGAAGAGATGAGAGAGAGT+TGG | - | chr8_4:3555607-3555626 | None:intergenic | 40.0% | |
| AAAAGAGAAAGCTAAGGCCT+TGG | - | chr8_4:3555749-3555768 | None:intergenic | 40.0% | |
| ! | CCAACTTTTGCAGGAATGTT+TGG | - | chr8_4:3555855-3555874 | None:intergenic | 40.0% |
| CCAAACATTCCTGCAAAAGT+TGG | + | chr8_4:3555852-3555871 | Msa1307680:intron | 40.0% | |
| !! | TCCAATTTGTTAGTTCTCGG+GGG | + | chr8_4:3556231-3556250 | Msa1307680:intron | 40.0% |
| GATATGCCGAAAACTTCAAC+AGG | - | chr8_4:3556463-3556482 | Msa1307690:CDS | 40.0% | |
| !!! | GTTTTAGGAGCCATGAAATG+CGG | + | chr8_4:3556496-3556515 | Msa1307680:intron | 40.0% |
| AGATCATTTGCCGCATTTCA+TGG | - | chr8_4:3556509-3556528 | Msa1307690:CDS | 40.0% | |
| TGCTAGACCTGATGATCTAT+GGG | - | chr8_4:3556608-3556627 | Msa1307690:CDS | 40.0% | |
| TTGCTAGACCTGATGATCTA+TGG | - | chr8_4:3556609-3556628 | Msa1307690:CDS | 40.0% | |
| AGAAAACATCAGCTCAATCG+AGG | - | chr8_4:3556680-3556699 | Msa1307690:CDS | 40.0% | |
| AAGGACATAATAGTATCCGG+GGG | - | chr8_4:3556703-3556722 | Msa1307690:CDS | 40.0% | |
| GAAGGACATAATAGTATCCG+GGG | - | chr8_4:3556704-3556723 | Msa1307690:CDS | 40.0% | |
| ! | CTTGCTGTGAAACATTCTGA+TGG | - | chr8_4:3556751-3556770 | Msa1307690:CDS | 40.0% |
| !! | ATGCTTCTTCTGTTGCTTTG+AGG | + | chr8_4:3556800-3556819 | Msa1307680:intron | 40.0% |
| AGAGGGAATACAATGATGAG+TGG | - | chr8_4:3556838-3556857 | Msa1307690:CDS | 40.0% | |
| ! | GTTGGTGAGGTAATGTTTAG+AGG | - | chr8_4:3556856-3556875 | Msa1307690:CDS | 40.0% |
| GGAACACTATCCATTGTTGA+AGG | + | chr8_4:3556892-3556911 | Msa1307680:intron | 40.0% | |
| GCCACAAATACTTTCGATGA+TGG | - | chr8_4:3557091-3557110 | Msa1307690:CDS | 40.0% | |
| ! | CACAAGGTATCAGTGATAAC+CGG | - | chr8_4:3557129-3557148 | Msa1307690:CDS | 40.0% |
| ! | TAATGGTTGGTGCTTAGCTT+GGG | - | chr8_4:3557313-3557332 | Msa1307690:CDS | 40.0% |
| CCCTCTTTCCTGTTTATCTT+TGG | - | chr8_4:3557356-3557375 | Msa1307690:CDS | 40.0% | |
| TGACTGAAGACAACTCCTTT+AGG | + | chr8_4:3557426-3557445 | Msa1307680:intron | 40.0% | |
| ! | AGGCTTTCTTTTCGCTCTTT+TGG | + | chr8_4:3557620-3557639 | Msa1307680:intron | 40.0% |
| !! | TTCTTTTCGCTCTTTTGGCT+AGG | + | chr8_4:3557625-3557644 | Msa1307680:intron | 40.0% |
| TTGCTTGTGAATGCTCCAAT+AGG | + | chr8_4:3557703-3557722 | Msa1307680:intron | 40.0% | |
| TTCACGCCTTGATGCAAATA+TGG | - | chr8_4:3557736-3557755 | Msa1307690:CDS | 40.0% | |
| AAATGCAGCTCATACATTGC+AGG | + | chr8_4:3557795-3557814 | Msa1307680:intron | 40.0% | |
| AATGCAGCTCATACATTGCA+GGG | + | chr8_4:3557796-3557815 | Msa1307680:intron | 40.0% | |
| TCATACATTGCAGGGACATT+AGG | + | chr8_4:3557804-3557823 | Msa1307680:intron | 40.0% | |
| !! | GGTGGTGATTGATTTTGCTA+GGG | - | chr8_4:3558032-3558051 | Msa1307690:intron | 40.0% |
| !! | TGGTGGTGATTGATTTTGCT+AGG | - | chr8_4:3558033-3558052 | Msa1307690:intron | 40.0% |
| ! | GTTGATAGGTGACAAAGGAA+CGG | + | chr8_4:3559018-3559037 | Msa1307680:intron | 40.0% |
| ACAAAGGAACGGAATTTGCA+TGG | + | chr8_4:3559029-3559048 | Msa1307680:intron | 40.0% | |
| GATCATGGGAATCAATGGAA+GGG | - | chr8_4:3559066-3559085 | None:intergenic | 40.0% | |
| GACGCCTCAACAATGTTAAT+TGG | + | chr8_4:3559184-3559203 | Msa1307680:intron | 40.0% | |
| !!! | ACAATTTTTTTGGTGGTGGC+CGG | + | chr8_4:3559392-3559411 | Msa1307680:intron | 40.0% |
| GCCAAAATGAAAAATGGCAG+CGG | + | chr8_4:3559812-3559831 | Msa1307680:intron | 40.0% | |
| CCAAAATGAAAAATGGCAGC+GGG | + | chr8_4:3559813-3559832 | Msa1307680:intron | 40.0% | |
| GCGGATAAAACGTCATGAAT+AGG | - | chr8_4:3560575-3560594 | None:intergenic | 40.0% | |
| ! | TGAATCTCAGTTTGGCTTAG+AGG | + | chr8_4:3560802-3560821 | Msa1307680:intron | 40.0% |
| ! | GAATCTCAGTTTGGCTTAGA+GGG | + | chr8_4:3560803-3560822 | Msa1307680:intron | 40.0% |
| ! | AATCTCAGTTTGGCTTAGAG+GGG | + | chr8_4:3560804-3560823 | Msa1307680:intron | 40.0% |
| ! | TTGTGAACCGGAAACCATTT+TGG | + | chr8_4:3560835-3560854 | Msa1307680:intron | 40.0% |
| TAGCCATCCAAAATGGTTTC+CGG | - | chr8_4:3560845-3560864 | None:intergenic | 40.0% | |
| AGGTCATTTAGCAAGGACTA+TGG | + | chr8_4:3561058-3561077 | Msa1307680:intron | 40.0% | |
| GGTCATTTAGCAAGGACTAT+GGG | + | chr8_4:3561059-3561078 | Msa1307680:intron | 40.0% | |
| TGGGTGGTCCTTAAAAAAAG+GGG | + | chr8_4:3561078-3561097 | Msa1307680:intron | 40.0% | |
| AGGCTCCCTAATTATGTATG+TGG | + | chr8_4:3561111-3561130 | Msa1307680:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_4:3561188-3561207 | Msa1307680:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_4:3561189-3561208 | Msa1307680:intron | 40.0% | |
| TTATGTAGAGCCACCATTCA+CGG | + | chr8_4:3561334-3561353 | Msa1307680:intron | 40.0% | |
| GTTTCACATCGGATATGAGA+TGG | + | chr8_4:3561522-3561541 | Msa1307680:intron | 40.0% | |
| CTAACACAACTCCAGAAAAC+TGG | - | chr8_4:3561592-3561611 | None:intergenic | 40.0% | |
| !!! | CAGTTTTCTGGAGTTGTGTT+AGG | + | chr8_4:3561590-3561609 | Msa1307680:intron | 40.0% |
| !! | GATAACGGAAACCTAATAGC+AGG | - | chr8_4:3561670-3561689 | None:intergenic | 40.0% |
| GCTATTAGGTTTCCGTTATC+GGG | + | chr8_4:3561670-3561689 | Msa1307680:intron | 40.0% | |
| GGAGCATGGACATAAATGAT+GGG | - | chr8_4:3561699-3561718 | None:intergenic | 40.0% | |
| TGGAGCATGGACATAAATGA+TGG | - | chr8_4:3561700-3561719 | None:intergenic | 40.0% | |
| AGTTGTATCGCTACATGTGA+TGG | - | chr8_4:3561813-3561832 | None:intergenic | 40.0% | |
| !! | GGAAGTATTTCCCCAAAAAG+AGG | - | chr8_4:3561988-3562007 | None:intergenic | 40.0% |
| ATGGCACCAAAACTATGTCA+TGG | - | chr8_4:3562009-3562028 | None:intergenic | 40.0% | |
| !!! | TGACATAGTTTTGGTGCCAT+TGG | + | chr8_4:3562009-3562028 | Msa1307680:intron | 40.0% |
| !!! | CTCTTTTTTGGGTGAAACGA+GGG | + | chr8_4:3562166-3562185 | Msa1307680:intron | 40.0% |
| !!! | TCTTTTTTGGGTGAAACGAG+GGG | + | chr8_4:3562167-3562186 | Msa1307680:intron | 40.0% |
| GTACTTGTGACTGAGATTGA+TGG | + | chr8_4:3562553-3562572 | Msa1307680:CDS | 40.0% | |
| TGAGTATTTGGATGAAGCGT+CGG | - | chr8_4:3562638-3562657 | None:intergenic | 40.0% | |
| AGTGACCTCTACTTTCCTAA+TGG | + | chr8_4:3554025-3554044 | Msa1307680:intron | 40.0% | |
| CAACTCCATTAGGAAAGTAG+AGG | - | chr8_4:3562759-3562778 | None:intergenic | 40.0% | |
| AGTGACATCAAATGATACCG+TGG | - | chr8_4:3563392-3563411 | None:intergenic | 40.0% | |
| ACACACACACACACACAAAA+GGG | + | chr8_4:3563538-3563557 | Msa1307680:intron | 40.0% | |
| TTGAGCATTATGTCCAGTTC+AGG | - | chr8_4:3554994-3555013 | None:intergenic | 40.0% | |
| CCAGAACCTTCCTAATGAAA+GGG | - | chr8_4:3563943-3563962 | None:intergenic | 40.0% | |
| CTGAATTTGTCAAAGAACGG+AGG | + | chr8_4:3563989-3564008 | Msa1307680:intron | 40.0% | |
| ! | CCCAAATTTTCATTGACCAC+TGG | + | chr8_4:3564061-3564080 | Msa1307680:CDS | 40.0% |
| CCCAGTGGTCAATGAAAATT+TGG | - | chr8_4:3564065-3564084 | None:intergenic | 40.0% | |
| TTGACCACTGGGATTAAGAT+TGG | + | chr8_4:3564073-3564092 | Msa1307680:CDS | 40.0% | |
| TGACCACTGGGATTAAGATT+GGG | + | chr8_4:3564074-3564093 | Msa1307680:CDS | 40.0% | |
| ATTCCCAATCTTAATCCCAG+TGG | - | chr8_4:3564080-3564099 | None:intergenic | 40.0% | |
| GTTGCAAAGGGACAAGTTCT+TGG | + | chr8_4:3552437-3552456 | Msa1307680:CDS | 45.0% | |
| !! | ATATGATGCTGCTTTGGGTG+TGG | + | chr8_4:3552475-3552494 | Msa1307680:CDS | 45.0% |
| ! | GCTTTGGGTGTGGTTTATAC+TGG | + | chr8_4:3552485-3552504 | Msa1307680:CDS | 45.0% |
| ! | ATACTGGTTGTGAAGATGGG+TGG | + | chr8_4:3552501-3552520 | Msa1307680:CDS | 45.0% |
| ATGAATCGGTGGTCGAAGAT+TGG | + | chr8_4:3552543-3552562 | Msa1307680:CDS | 45.0% | |
| GGATCAAAAGCCAAACCAAG+TGG | - | chr8_4:3552587-3552606 | None:intergenic | 45.0% | |
| !!! | GGTTTGGCTTTTGATCCCAA+TGG | + | chr8_4:3552590-3552609 | Msa1307680:CDS | 45.0% |
| CACTTATTGTTGCAGACGCA+CGG | + | chr8_4:3552615-3552634 | Msa1307680:intron | 45.0% | |
| AGGTTTGAAGGCAACCCTAA+TGG | + | chr8_4:3553953-3553972 | Msa1307680:intron | 45.0% | |
| TTGAAGGCAACCCTAATGGT+AGG | + | chr8_4:3553957-3553976 | Msa1307680:intron | 45.0% | |
| GTAGAGGTCACTCACTAGTA+GGG | - | chr8_4:3554017-3554036 | None:intergenic | 45.0% | |
| AGTAGAGGTCACTCACTAGT+AGG | - | chr8_4:3554018-3554037 | None:intergenic | 45.0% | |
| GGTGAGACTGCAACTACATT+AGG | - | chr8_4:3554043-3554062 | None:intergenic | 45.0% | |
| !! | GAAAAGTTTTGTGACCTCCC+TGG | + | chr8_4:3554604-3554623 | Msa1307680:intron | 45.0% |
| GAATGTTATCAGGCATGCCA+GGG | - | chr8_4:3554624-3554643 | None:intergenic | 45.0% | |
| TGAATGTTATCAGGCATGCC+AGG | - | chr8_4:3554625-3554644 | None:intergenic | 45.0% | |
| GCAGTTGTGGACAGAAGATA+AGG | + | chr8_4:3554800-3554819 | Msa1307680:intron | 45.0% | |
| CCAGAGCCTTCCTAATGAAA+GGG | - | chr8_4:3555020-3555039 | None:intergenic | 45.0% | |
| AGGAGTTATCACTGTGGACT+TGG | + | chr8_4:3555086-3555105 | Msa1307680:intron | 45.0% | |
| GTTATCACTGTGGACTTGGA+AGG | + | chr8_4:3555090-3555109 | Msa1307680:intron | 45.0% | |
| CTGACTGGTGGGATAAAGAT+TGG | + | chr8_4:3555150-3555169 | Msa1307680:intron | 45.0% | |
| TAGGTGGGTGGCATGAATAT+AGG | + | chr8_4:3555314-3555333 | Msa1307680:intron | 45.0% | |
| CTCGAGCAATCAACTACACA+TGG | + | chr8_4:3555433-3555452 | Msa1307680:intron | 45.0% | |
| AGGGAAGAGAGGAAGAAAGA+TGG | - | chr8_4:3555636-3555655 | None:intergenic | 45.0% | |
| GGCTCAAGAAATGTTGTCCA+AGG | + | chr8_4:3555729-3555748 | Msa1307680:intron | 45.0% | |
| !! | CCAATTTGTTAGTTCTCGGG+GGG | + | chr8_4:3556232-3556251 | Msa1307680:intron | 45.0% |
| !!! | TGTTTTGAGGGAGAAAGCCA+AGG | - | chr8_4:3556425-3556444 | Msa1307690:CDS | 45.0% |
| GCTAGACCTGATGATCTATG+GGG | - | chr8_4:3556607-3556626 | Msa1307690:CDS | 45.0% | |
| !! | GGTTTTGTATAGCCATCCAG+CGG | - | chr8_4:3556650-3556669 | Msa1307690:CDS | 45.0% |
| CGAAATCAAAGACCGGTTGA+AGG | - | chr8_4:3556722-3556741 | Msa1307690:CDS | 45.0% | |
| ! | TGATGGAAAAACGGTTGGTG+AGG | - | chr8_4:3556869-3556888 | Msa1307690:CDS | 45.0% |
| TGTTCCGGCTGATGGAAAAA+CGG | - | chr8_4:3556878-3556897 | Msa1307690:CDS | 45.0% | |
| TCACAGAAACATGTGGTGCA+GGG | - | chr8_4:3557032-3557051 | Msa1307690:CDS | 45.0% | |
| TATGGCCTCACAGAAACATG+TGG | - | chr8_4:3557039-3557058 | Msa1307690:CDS | 45.0% | |
| !! | ATCGAAAGTATTTGTGGCGG+TGG | + | chr8_4:3557093-3557112 | Msa1307680:intron | 45.0% |
| ! | AAGGTATCAGTGATAACCGG+AGG | - | chr8_4:3557126-3557145 | Msa1307690:CDS | 45.0% |
| ! | AATGGTTGGTGCTTAGCTTG+GGG | - | chr8_4:3557312-3557331 | Msa1307690:CDS | 45.0% |
| ! | CTAATGGTTGGTGCTTAGCT+TGG | - | chr8_4:3557314-3557333 | Msa1307690:CDS | 45.0% |
| ACAGGATCTAATTCACTGCG+TGG | + | chr8_4:3557483-3557502 | Msa1307680:intron | 45.0% | |
| !! | TTTTCGCTCTTTTGGCTAGG+AGG | + | chr8_4:3557628-3557647 | Msa1307680:intron | 45.0% |
| ! | GGTATCAGAGCCTATCGATT+CGG | + | chr8_4:3558704-3558723 | Msa1307680:intron | 45.0% |
| AGGGATTTCTCGTGGAGATA+TGG | - | chr8_4:3558876-3558895 | Msa1307690:CDS | 45.0% | |
| TCCACGAGAAATCCCTAACT+GGG | + | chr8_4:3558880-3558899 | Msa1307680:intron | 45.0% | |
| CTTCTTCTCTCTCCCAGTTA+GGG | - | chr8_4:3558895-3558914 | Msa1307690:CDS | 45.0% | |
| ! | GCTCTCTCCAAGAAGTTGAT+AGG | + | chr8_4:3559004-3559023 | Msa1307680:intron | 45.0% |
| GGATCATGGGAATCAATGGA+AGG | - | chr8_4:3559067-3559086 | None:intergenic | 45.0% | |
| !! | TCCATTGATTCCCATGATCC+TGG | + | chr8_4:3559067-3559086 | Msa1307680:intron | 45.0% |
| TCCAGGATCATGGGAATCAA+TGG | - | chr8_4:3559071-3559090 | None:intergenic | 45.0% | |
| !!! | TTTTTTCAGGACGGTGTTCC+AGG | - | chr8_4:3559088-3559107 | None:intergenic | 45.0% |
| !!! | CAATTTTTTTGGTGGTGGCC+GGG | + | chr8_4:3559393-3559412 | Msa1307680:intron | 45.0% |
| TGAGTTCAGCTCAGTTGGTT+TGG | - | chr8_4:3559455-3559474 | None:intergenic | 45.0% | |
| !!! | CCCGCTGCCATTTTTCATTT+TGG | - | chr8_4:3559816-3559835 | None:intergenic | 45.0% |
| AGCTTAATGGTGTTTGGACG+TGG | - | chr8_4:3560044-3560063 | None:intergenic | 45.0% | |
| GTGACAGATCAAGCATTTCG+TGG | - | chr8_4:3560532-3560551 | None:intergenic | 45.0% | |
| GGTCCATGGAGCCATTATAA+TGG | + | chr8_4:3560606-3560625 | Msa1307680:intron | 45.0% | |
| CCTCCATTATAATGGCTCCA+TGG | - | chr8_4:3560612-3560631 | None:intergenic | 45.0% | |
| CCATGGAGCCATTATAATGG+AGG | + | chr8_4:3560609-3560628 | Msa1307680:intron | 45.0% | |
| ! | GAACCGGAAACCATTTTGGA+TGG | + | chr8_4:3560839-3560858 | Msa1307680:intron | 45.0% |
| GTGTGTCAACCCACTATTGT+AGG | + | chr8_4:3561038-3561057 | Msa1307680:intron | 45.0% | |
| CATTTAGCAAGGACTATGGG+TGG | + | chr8_4:3561062-3561081 | Msa1307680:intron | 45.0% | |
| TATGTAGAGCCACCATTCAC+GGG | + | chr8_4:3561335-3561354 | Msa1307680:intron | 45.0% | |
| ! | TACCTCAGAAGCCAGTTTTC+TGG | + | chr8_4:3561578-3561597 | Msa1307680:intron | 45.0% |
| GCCCAACCACAATTTCTAAG+TGG | + | chr8_4:3561612-3561631 | Msa1307680:intron | 45.0% | |
| AACGGAAACCTAATAGCAGG+TGG | - | chr8_4:3561667-3561686 | None:intergenic | 45.0% | |
| !! | AATGATGGGTGACCCGATAA+CGG | - | chr8_4:3561685-3561704 | None:intergenic | 45.0% |
| ! | GTATCGCTACATGTGATGGA+AGG | - | chr8_4:3561809-3561828 | None:intergenic | 45.0% |
| GTAGCGATACAACTTCCCAT+CGG | + | chr8_4:3561819-3561838 | Msa1307680:intron | 45.0% | |
| TAAGGAGTGATGCTACCGAT+GGG | - | chr8_4:3561837-3561856 | None:intergenic | 45.0% | |
| ATAAGGAGTGATGCTACCGA+TGG | - | chr8_4:3561838-3561857 | None:intergenic | 45.0% | |
| TCGGTAGCATCACTCCTTAT+AGG | + | chr8_4:3561838-3561857 | Msa1307680:intron | 45.0% | |
| CGGTAGCATCACTCCTTATA+GGG | + | chr8_4:3561839-3561858 | Msa1307680:intron | 45.0% | |
| ! | ATTGAGACGGGACCTCTTTT+TGG | + | chr8_4:3561973-3561992 | Msa1307680:intron | 45.0% |
| ! | TTGAGACGGGACCTCTTTTT+GGG | + | chr8_4:3561974-3561993 | Msa1307680:intron | 45.0% |
| AATGGCTAGGATTTCCCCAA+TGG | - | chr8_4:3562037-3562056 | None:intergenic | 45.0% | |
| ATCCTAGCCATTGATGTGTG+TGG | + | chr8_4:3562045-3562064 | Msa1307680:intron | 45.0% | |
| ATCCACACACATCAATGGCT+AGG | - | chr8_4:3562050-3562069 | None:intergenic | 45.0% | |
| CACACATCCACACACATCAA+TGG | - | chr8_4:3562055-3562074 | None:intergenic | 45.0% | |
| TTGATGTGTGTGGATGTGTG+TGG | + | chr8_4:3562055-3562074 | Msa1307680:intron | 45.0% | |
| TGATGTGTGTGGATGTGTGT+GGG | + | chr8_4:3562056-3562075 | Msa1307680:intron | 45.0% | |
| CACCAATGACACCAAAGCTA+TGG | + | chr8_4:3562127-3562146 | Msa1307680:intron | 45.0% | |
| !! | TGCCATAGCTTTGGTGTCAT+TGG | - | chr8_4:3562132-3562151 | None:intergenic | 45.0% |
| CCTCGTTTCACCCAAAAAAG+AGG | - | chr8_4:3562168-3562187 | None:intergenic | 45.0% | |
| !!! | CCTCTTTTTTGGGTGAAACG+AGG | + | chr8_4:3562165-3562184 | Msa1307680:intron | 45.0% |
| ! | TTTAGTGGGCACATCATGCA+TGG | + | chr8_4:3562441-3562460 | Msa1307680:intron | 45.0% |
| GTAGAGGTCACTCACTAGTA+GGG | - | chr8_4:3554017-3554036 | None:intergenic | 45.0% | |
| AGTAGAGGTCACTCACTAGT+AGG | - | chr8_4:3554018-3554037 | None:intergenic | 45.0% | |
| TAATGGAGTTGCAGTCTCAC+CGG | + | chr8_4:3562768-3562787 | Msa1307680:intron | 45.0% | |
| ! | AAGCACACCCCTTAGTTTGA+TGG | - | chr8_4:3562978-3562997 | None:intergenic | 45.0% |
| ! | ATGGGGTGTTCATACTGTTC+CGG | - | chr8_4:3563105-3563124 | None:intergenic | 45.0% |
| !! | GAAAAGTTTTGTGACCTCCC+TGG | + | chr8_4:3554604-3554623 | Msa1307680:intron | 45.0% |
| GAATGTTATCAGGCATGCCA+GGG | - | chr8_4:3554624-3554643 | None:intergenic | 45.0% | |
| TGAATGTTATCAGGCATGCC+AGG | - | chr8_4:3554625-3554644 | None:intergenic | 45.0% | |
| ! | GTACTGGATTGGAATAGCCA+CGG | + | chr8_4:3563372-3563391 | Msa1307680:intron | 45.0% |
| GTGTGTGTGTGTGTGTGAAT+TGG | - | chr8_4:3563532-3563551 | None:intergenic | 45.0% | |
| CACACACACACACACACAAA+AGG | + | chr8_4:3563537-3563556 | Msa1307680:intron | 45.0% | |
| ! | TCAGGCATTTTCTCCTGAAC+TGG | + | chr8_4:3563901-3563920 | Msa1307680:intron | 45.0% |
| CCCTTTCATTAGGAAGGTTC+TGG | + | chr8_4:3563940-3563959 | Msa1307680:intron | 45.0% | |
| GCCAGAACCTTCCTAATGAA+AGG | - | chr8_4:3563944-3563963 | None:intergenic | 45.0% | |
| AGGAGTTATCACTGTGGACT+TGG | + | chr8_4:3555086-3555105 | Msa1307680:intron | 45.0% | |
| GTTATCACTGTGGACTTGGA+AGG | + | chr8_4:3555090-3555109 | Msa1307680:intron | 45.0% | |
| !!! | TTTTATTATAATATATAGTT+TGG | - | chr8_4:3556295-3556314 | None:intergenic | 5.0% |
| !! | TAATAAAAAATATATTTAGT+CGG | + | chr8_4:3559596-3559615 | Msa1307680:intron | 5.0% |
| !!! | TTAAATATTTTTTATTTAAG+TGG | - | chr8_4:3561905-3561924 | None:intergenic | 5.0% |
| !! | AAATAAAAAAATGTAAAAAA+CGG | + | chr8_4:3561947-3561966 | Msa1307680:intron | 5.0% |
| ! | GATTAAGGGCCCGCTTCTTT+TGG | + | chr8_4:3553392-3553411 | Msa1307680:intron | 50.0% |
| !! | GGGGTTGATGTAGCACATGA+TGG | + | chr8_4:3553889-3553908 | Msa1307680:intron | 50.0% |
| AAGCACACCCCTCAGTTTGA+TGG | - | chr8_4:3554272-3554291 | None:intergenic | 50.0% | |
| !! | ATGATGGACATGGGCAGTAC+TGG | + | chr8_4:3554647-3554666 | Msa1307680:intron | 50.0% |
| GTACTGGATCGGAATCGCAA+CGG | + | chr8_4:3554663-3554682 | Msa1307680:intron | 50.0% | |
| ! | GCAGGCCTTTTCTCTTGAAC+TGG | + | chr8_4:3554978-3554997 | Msa1307680:intron | 50.0% |
| CCCTTTCATTAGGAAGGCTC+TGG | + | chr8_4:3555017-3555036 | Msa1307680:intron | 50.0% | |
| GCCAGAGCCTTCCTAATGAA+AGG | - | chr8_4:3555021-3555040 | None:intergenic | 50.0% | |
| GAACGGAGGAGTTATCACTG+TGG | + | chr8_4:3555080-3555099 | Msa1307680:intron | 50.0% | |
| CCCCCCGAGAACTAACAAAT+TGG | - | chr8_4:3556235-3556254 | None:intergenic | 50.0% | |
| !! | AAGGCCTTGGGAAGCATTTC+TGG | - | chr8_4:3556406-3556425 | Msa1307690:CDS | 50.0% |
| AGAAATGCTTCCCAAGGCCT+TGG | + | chr8_4:3556405-3556424 | Msa1307680:intron | 50.0% | |
| GTTTGGCCCCATAGATCATC+AGG | + | chr8_4:3556598-3556617 | Msa1307680:intron | 50.0% | |
| CAGCTCAATCGAGGTAGAGA+CGG | - | chr8_4:3556671-3556690 | Msa1307690:CDS | 50.0% | |
| ! | TGAGCTGATGTTTTCTCCCC+CGG | + | chr8_4:3556684-3556703 | Msa1307680:intron | 50.0% |
| !! | CCAACCGTTTTTCCATCAGC+CGG | + | chr8_4:3556871-3556890 | Msa1307680:intron | 50.0% |
| ATGGATAGTGTTCCGGCTGA+TGG | - | chr8_4:3556886-3556905 | Msa1307690:CDS | 50.0% | |
| AGTTCCTCCAACCCTACATG+TGG | + | chr8_4:3556928-3556947 | Msa1307680:intron | 50.0% | |
| TGTACCACATGTAGGGTTGG+AGG | - | chr8_4:3556935-3556954 | Msa1307690:CDS | 50.0% | |
| AGGTGTACCACATGTAGGGT+TGG | - | chr8_4:3556938-3556957 | Msa1307690:CDS | 50.0% | |
| GGCAAGGTGTACCACATGTA+GGG | - | chr8_4:3556942-3556961 | Msa1307690:CDS | 50.0% | |
| AGGCAAGGTGTACCACATGT+AGG | - | chr8_4:3556943-3556962 | Msa1307690:CDS | 50.0% | |
| TTGTGCTTGGAGACCTGAGT+GGG | - | chr8_4:3557004-3557023 | Msa1307690:CDS | 50.0% | |
| TTTGTGCTTGGAGACCTGAG+TGG | - | chr8_4:3557005-3557024 | Msa1307690:CDS | 50.0% | |
| ! | GTGCAGGGACTTTTTGTGCT+TGG | - | chr8_4:3557017-3557036 | Msa1307690:CDS | 50.0% |
| CTCACAGAAACATGTGGTGC+AGG | - | chr8_4:3557033-3557052 | Msa1307690:CDS | 50.0% | |
| ! | CTGCACCACATGTTTCTGTG+AGG | + | chr8_4:3557031-3557050 | Msa1307680:intron | 50.0% |
| !! | GAAAGTATTTGTGGCGGTGG+AGG | + | chr8_4:3557096-3557115 | Msa1307680:intron | 50.0% |
| GGAGTTGTCTTCAGTCACAG+AGG | - | chr8_4:3557423-3557442 | Msa1307690:CDS | 50.0% | |
| GGCACTACATCTAGGCCTAA+AGG | - | chr8_4:3557444-3557463 | Msa1307690:CDS | 50.0% | |
| ACACCTCTGGCACTACATCT+AGG | - | chr8_4:3557452-3557471 | Msa1307690:CDS | 50.0% | |
| CAACTACTCGAAGTTGCTCG+AGG | - | chr8_4:3557663-3557682 | Msa1307690:CDS | 50.0% | |
| CATTTCGCAGTACCAATGGC+TGG | - | chr8_4:3557780-3557799 | Msa1307690:CDS | 50.0% | |
| GCTGCATTTCGCAGTACCAA+TGG | - | chr8_4:3557784-3557803 | Msa1307690:CDS | 50.0% | |
| AGGGACATTAGGTGCTAGTG+TGG | + | chr8_4:3557815-3557834 | Msa1307680:intron | 50.0% | |
| !! | GTTGGCTTTGATGCTCAGCA+AGG | - | chr8_4:3557889-3557908 | Msa1307690:intron | 50.0% |
| GCACTGTGAACTGTGCTTGT+TGG | - | chr8_4:3557907-3557926 | Msa1307690:intron | 50.0% | |
| AGTGGCATCTCGAAACTGAG+CGG | + | chr8_4:3557979-3557998 | Msa1307680:intron | 50.0% | |
| ! | GTTTGGTGGTCCGAATCGAT+AGG | - | chr8_4:3558717-3558736 | Msa1307690:intron | 50.0% |
| CTCCACGAGAAATCCCTAAC+TGG | + | chr8_4:3558879-3558898 | Msa1307680:intron | 50.0% | |
| TCCCAGTTAGGGATTTCTCG+TGG | - | chr8_4:3558884-3558903 | Msa1307690:CDS | 50.0% | |
| GCTTCTTCTCTCTCCCAGTT+AGG | - | chr8_4:3558896-3558915 | Msa1307690:CDS | 50.0% | |
| CTTCTTGGAGAGAGCAGCAA+AGG | - | chr8_4:3558999-3559018 | Msa1307690:CDS | 50.0% | |
| AAAGTCCGCGGTTCAAATCC+CGG | - | chr8_4:3559414-3559433 | None:intergenic | 50.0% | |
| !! | TGCCTTCACATAAAGGTGCC+AGG | + | chr8_4:3560004-3560023 | Msa1307680:intron | 50.0% |
| CACCTGGCACCTTTATGTGA+AGG | - | chr8_4:3560009-3560028 | None:intergenic | 50.0% | |
| !! | CTTCACATAAAGGTGCCAGG+TGG | + | chr8_4:3560007-3560026 | Msa1307680:intron | 50.0% |
| GTGTTTGGACGTGGTCAGTT+AGG | - | chr8_4:3560035-3560054 | None:intergenic | 50.0% | |
| GGTGGTTTCAGAATCAACGG+TGG | - | chr8_4:3560554-3560573 | None:intergenic | 50.0% | |
| CATGGACCGAGGATGTTAAG+CGG | - | chr8_4:3560594-3560613 | None:intergenic | 50.0% | |
| TATAATGGCTCCATGGACCG+AGG | - | chr8_4:3560605-3560624 | None:intergenic | 50.0% | |
| GGGGAATGACGTTTGTGAAC+CGG | + | chr8_4:3560823-3560842 | Msa1307680:intron | 50.0% | |
| ATGTAGAGCCACCATTCACG+GGG | + | chr8_4:3561336-3561355 | Msa1307680:intron | 50.0% | |
| CGGGGTGGGATACTGAAAAA+TGG | + | chr8_4:3561354-3561373 | Msa1307680:intron | 50.0% | |
| ! | CTCCAGAAAACTGGCTTCTG+AGG | - | chr8_4:3561583-3561602 | None:intergenic | 50.0% |
| CCTAATAGCAGGTGGTCCAA+CGG | - | chr8_4:3561659-3561678 | None:intergenic | 50.0% | |
| ATGTCCATGCTCCAGATGTC+CGG | + | chr8_4:3561706-3561725 | Msa1307680:intron | 50.0% | |
| ! | TGAGACGGGACCTCTTTTTG+GGG | + | chr8_4:3561975-3561994 | Msa1307680:intron | 50.0% |
| !! | TTTGGTGCCATTGGTGCCAT+TGG | + | chr8_4:3562018-3562037 | Msa1307680:intron | 50.0% |
| !! | TTGGTGCCATTGGTGCCATT+GGG | + | chr8_4:3562019-3562038 | Msa1307680:intron | 50.0% |
| GATTTCCCCAATGGCACCAA+TGG | - | chr8_4:3562028-3562047 | None:intergenic | 50.0% | |
| GATGTGTGTGGATGTGTGTG+GGG | + | chr8_4:3562057-3562076 | Msa1307680:intron | 50.0% | |
| GTGTGTGATGTGTGTCTGTG+TGG | + | chr8_4:3562086-3562105 | Msa1307680:intron | 50.0% | |
| TGTGATGTGTGTCTGTGTGG+TGG | + | chr8_4:3562089-3562108 | Msa1307680:intron | 50.0% | |
| !! | GCACTTTGGTGCCATAGCTT+TGG | - | chr8_4:3562141-3562160 | None:intergenic | 50.0% |
| !! | GGGGTTGATGTAGCACATGA+TGG | + | chr8_4:3553889-3553908 | Msa1307680:intron | 50.0% |
| GGTGAGACTGCAACTCCATT+AGG | - | chr8_4:3562769-3562788 | None:intergenic | 50.0% | |
| GCGCGAGAAACTCATAGGAT+GGG | + | chr8_4:3563177-3563196 | Msa1307680:intron | 50.0% | |
| !! | ATGATGGACATGGGCAGTAC+TGG | + | chr8_4:3554647-3554666 | Msa1307680:intron | 50.0% |
| GAACGGAGGAGTTATCACTG+TGG | + | chr8_4:3555080-3555099 | Msa1307680:intron | 50.0% | |
| AACACAGGGGGAAGACCACT+TGG | + | chr8_4:3552569-3552588 | Msa1307680:CDS | 55.0% | |
| AGGGGGAAGACCACTTGGTT+TGG | + | chr8_4:3552574-3552593 | Msa1307680:CDS | 55.0% | |
| AGAAGCGGGCCCTTAATCCA+AGG | - | chr8_4:3553390-3553409 | None:intergenic | 55.0% | |
| TGTTATCAGGCATGCCAGGG+AGG | - | chr8_4:3554621-3554640 | None:intergenic | 55.0% | |
| ! | GGACATGGGCAGTACTGGAT+CGG | + | chr8_4:3554652-3554671 | Msa1307680:intron | 55.0% |
| GGGTCCAGAAATGCTTCCCA+AGG | + | chr8_4:3556399-3556418 | Msa1307680:intron | 55.0% | |
| AGGGAGAAAGCCAAGGCCTT+GGG | - | chr8_4:3556418-3556437 | Msa1307690:CDS | 55.0% | |
| TAGCCATCCAGCGGTCTTAG+AGG | - | chr8_4:3556641-3556660 | Msa1307690:CDS | 55.0% | |
| CCGGCTGATGGAAAAACGGT+TGG | - | chr8_4:3556874-3556893 | Msa1307690:CDS | 55.0% | |
| GGAGGTAACATGTCCCACTC+AGG | + | chr8_4:3556988-3557007 | Msa1307680:intron | 55.0% | |
| ! | TTGGTGCTTAGCTTGGGGAG+TGG | - | chr8_4:3557307-3557326 | Msa1307690:CDS | 55.0% |
| AGGCCTAGATGTAGTGCCAG+AGG | + | chr8_4:3557446-3557465 | Msa1307680:intron | 55.0% | |
| ! | CGAAGTTGCTCGAGGAGCAT+TGG | - | chr8_4:3557655-3557674 | Msa1307690:CDS | 55.0% |
| CAGAGAATGGCTCCAGCCAT+TGG | + | chr8_4:3557765-3557784 | Msa1307680:intron | 55.0% | |
| GGACGGTGTTCCAGGATCAT+GGG | - | chr8_4:3559080-3559099 | None:intergenic | 55.0% | |
| AGGACGGTGTTCCAGGATCA+TGG | - | chr8_4:3559081-3559100 | None:intergenic | 55.0% | |
| CCTCGTGAGTTCAGCTCAGT+TGG | - | chr8_4:3559460-3559479 | None:intergenic | 55.0% | |
| CCAACTGAGCTGAACTCACG+AGG | + | chr8_4:3559457-3559476 | Msa1307680:intron | 55.0% | |
| CGCTTAACATCCTCGGTCCA+TGG | + | chr8_4:3560592-3560611 | Msa1307680:intron | 55.0% | |
| TCAGTATCCCACCCCGTGAA+TGG | - | chr8_4:3561350-3561369 | None:intergenic | 55.0% | |
| CCGTTGGACCACCTGCTATT+AGG | + | chr8_4:3561656-3561675 | Msa1307680:intron | 55.0% | |
| ! | AGAACCGGACATCTGGAGCA+TGG | - | chr8_4:3561713-3561732 | None:intergenic | 55.0% |
| ATGCTCCAGATGTCCGGTTC+TGG | + | chr8_4:3561712-3561731 | Msa1307680:intron | 55.0% | |
| !! | ATGTCCGGTTCTGGACGTGA+GGG | + | chr8_4:3561721-3561740 | Msa1307680:intron | 55.0% |
| !! | TGGTGCCATTGGTGCCATTG+GGG | + | chr8_4:3562020-3562039 | Msa1307680:intron | 55.0% |
| TGAAACGAGGGGCAGAAGAC+AGG | + | chr8_4:3562178-3562197 | Msa1307680:intron | 55.0% | |
| AGTTTCTCGCGCGCCCTATT+CGG | - | chr8_4:3563169-3563188 | None:intergenic | 55.0% | |
| CGCGCGAGAAACTCATAGGA+TGG | + | chr8_4:3563176-3563195 | Msa1307680:intron | 55.0% | |
| TGTTATCAGGCATGCCAGGG+AGG | - | chr8_4:3554621-3554640 | None:intergenic | 55.0% | |
| ! | GGACATGGGCAGTACTGGAT+TGG | + | chr8_4:3554652-3554671 | Msa1307680:intron | 55.0% |
| !! | GGGAAGCATTTCTGGACCCC+TGG | - | chr8_4:3556398-3556417 | Msa1307690:CDS | 60.0% |
| GAGGGAGAAAGCCAAGGCCT+TGG | - | chr8_4:3556419-3556438 | Msa1307690:CDS | 60.0% | |
| TCCAGCGGTCTTAGAGGCTG+CGG | - | chr8_4:3556635-3556654 | Msa1307690:CDS | 60.0% | |
| !! | CAGCCTCTAAGACCGCTGGA+TGG | + | chr8_4:3556635-3556654 | Msa1307680:intron | 60.0% |
| TGGGGAGTGGCAGCACAGTT+TGG | - | chr8_4:3557294-3557313 | Msa1307690:CDS | 60.0% | |
| GTGGTCAGTTAGGAGCCACC+TGG | - | chr8_4:3560025-3560044 | None:intergenic | 60.0% | |
| TAGAGCCACCATTCACGGGG+TGG | + | chr8_4:3561339-3561358 | Msa1307680:intron | 60.0% | |
| AGAGCCACCATTCACGGGGT+GGG | + | chr8_4:3561340-3561359 | Msa1307680:intron | 60.0% | |
| GTATCCCACCCCGTGAATGG+TGG | - | chr8_4:3561347-3561366 | None:intergenic | 60.0% | |
| GAGCCTCCTCCAAGATCCGT+TGG | + | chr8_4:3561640-3561659 | Msa1307680:intron | 60.0% | |
| GGTCCAACGGATCTTGGAGG+AGG | - | chr8_4:3561646-3561665 | None:intergenic | 60.0% | |
| GGTGGTCCAACGGATCTTGG+AGG | - | chr8_4:3561649-3561668 | None:intergenic | 60.0% | |
| GCAGGTGGTCCAACGGATCT+TGG | - | chr8_4:3561652-3561671 | None:intergenic | 60.0% | |
| CACGTCCAGAACCGGACATC+TGG | - | chr8_4:3561720-3561739 | None:intergenic | 60.0% | |
| !! | GATGTCCGGTTCTGGACGTG+AGG | + | chr8_4:3561720-3561739 | Msa1307680:intron | 60.0% |
| !! | TGTCCGGTTCTGGACGTGAG+GGG | + | chr8_4:3561722-3561741 | Msa1307680:intron | 60.0% |
| AGGGCGCGCGAGAAACTCAT+AGG | + | chr8_4:3563172-3563191 | Msa1307680:intron | 60.0% | |
| !! | ACCGCAGCCTCTAAGACCGC+TGG | + | chr8_4:3556631-3556650 | Msa1307680:intron | 65.0% |
| TGGCGGTGGAGGAGAACCTC+CGG | + | chr8_4:3557107-3557126 | Msa1307680:intron | 65.0% | |
| GGTGGCCGGGATTTGAACCG+CGG | + | chr8_4:3559406-3559425 | Msa1307680:intron | 65.0% | |
| !! | GTCCGGTTCTGGACGTGAGG+GGG | + | chr8_4:3561723-3561742 | Msa1307680:intron | 65.0% |
| CACCCCCTCACGTCCAGAAC+CGG | - | chr8_4:3561728-3561747 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 3552416 | 3564180 | 3552416 | ID=Msa1307680;Name=Msa1307680 |
| chr8_4 | mRNA | 3552416 | 3564180 | 3552416 | ID=Msa1307680-mRNA-1;Parent=Msa1307680;Name=Msa1307680-mRNA-1;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|0.5|0.66|3|0|204 |
| chr8_4 | exon | 3552416 | 3552622 | 3552416 | ID=Msa1307680-mRNA-1:exon:1060;Parent=Msa1307680-mRNA-1 |
| chr8_4 | exon | 3562517 | 3562747 | 3562517 | ID=Msa1307680-mRNA-1:exon:1061;Parent=Msa1307680-mRNA-1 |
| chr8_4 | exon | 3564004 | 3564180 | 3564004 | ID=Msa1307680-mRNA-1:exon:1062;Parent=Msa1307680-mRNA-1 |
| chr8_4 | CDS | 3552416 | 3552622 | 3552416 | ID=Msa1307680-mRNA-1:cds;Parent=Msa1307680-mRNA-1 |
| chr8_4 | CDS | 3562517 | 3562747 | 3562517 | ID=Msa1307680-mRNA-1:cds;Parent=Msa1307680-mRNA-1 |
| chr8_4 | CDS | 3564004 | 3564180 | 3564004 | ID=Msa1307680-mRNA-1:cds;Parent=Msa1307680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
