AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1310550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1310550 MtrunA17_Chr8g0337671 81.595 326 20 6 91 376 1 326 2.74e-162 474
Msa1310550 MtrunA17_Chr8g0337671 82.584 178 22 2 339 509 443 618 2.86e-90 288
Msa1310550 MtrunA17_Chr7g0249841 61.656 326 80 8 93 377 1 322 3.10e-120 366
Msa1310550 MtrunA17_Chr7g0249841 65.714 175 55 2 339 508 439 613 2.61e-64 219
Msa1310550 MtrunA17_Chr4g0049181 41.892 370 136 11 79 386 23 375 7.97e-71 237
Msa1310550 MtrunA17_Chr4g0049181 37.500 96 50 2 381 475 517 603 2.56e-12 69.3
Msa1310550 MtrunA17_Chr4g0049171 54.124 194 65 4 131 304 35 224 1.77e-55 187
Msa1310550 MtrunA17_Chr6g0452221 36.086 327 158 11 105 386 10 330 5.02e-44 164
Msa1310550 MtrunA17_Chr6g0452221 42.763 152 82 2 339 486 438 588 4.46e-29 120
Msa1310550 MtrunA17_Chr2g0317071 30.387 181 115 4 297 475 897 1068 1.57e-19 92.4
Msa1310550 MtrunA17_Chr1g0203631 34.043 141 90 2 339 477 1131 1270 3.10e-19 91.7
Msa1310550 MtrunA17_Chr1g0203631 31.206 282 151 10 123 375 743 1010 4.99e-19 90.9
Msa1310550 MtrunA17_Chr8g0345561 32.597 181 111 5 297 475 912 1083 3.60e-19 91.3
Msa1310550 MtrunA17_Chr2g0284121 28.475 295 166 7 161 423 718 999 1.54e-17 86.3
Msa1310550 MtrunA17_Chr7g0250401 24.925 333 191 12 93 375 1 324 5.90e-17 84.0
Msa1310550 MtrunA17_Chr3g0129391 30.108 186 117 6 326 504 1000 1179 7.56e-17 84.3
Msa1310550 MtrunA17_Chr3g0129391 30.864 243 114 8 186 375 651 892 2.51e-16 82.4
Msa1310550 MtrunA17_Chr8g0363261 25.182 413 221 13 103 475 16 380 1.70e-16 81.3
Msa1310550 MtrunA17_Chr2g0284101 29.180 305 155 13 115 378 35 319 3.49e-16 81.6
Msa1310550 MtrunA17_Chr8g0363231 30.688 189 112 4 103 274 16 202 3.99e-16 77.8
Msa1310550 MtrunA17_Chr8g0363001 31.000 200 116 5 91 270 1 198 4.52e-16 77.8
Msa1310550 MtrunA17_Chr1g0165981 25.806 372 188 13 166 468 217 569 5.01e-16 80.9
Msa1310550 MtrunA17_Chr3g0079661 30.323 155 100 4 326 475 1040 1191 5.55e-16 81.3
Msa1310550 MtrunA17_Chr3g0079661 31.020 245 106 9 186 375 697 933 7.78e-13 71.2
Msa1310550 MtrunA17_Chr7g0229941 29.482 251 104 8 95 279 1 244 7.54e-16 80.5
Msa1310550 MtrunA17_Chr2g0296601 29.167 288 144 8 163 393 695 979 8.38e-16 80.9
Msa1310550 MtrunA17_Chr2g0296591 29.167 288 144 8 163 393 695 979 2.05e-15 79.7
Msa1310550 MtrunA17_Chr7g0220741 28.837 215 137 7 275 476 368 579 2.27e-15 79.0
Msa1310550 MtrunA17_Chr7g0220741 26.168 321 172 12 115 391 32 331 6.29e-11 65.1
Msa1310550 MtrunA17_Chr8g0362411 29.703 202 119 5 88 270 1 198 3.18e-15 75.5
Msa1310550 MtrunA17_Chr5g0400861 31.217 189 93 8 88 269 6 164 3.72e-15 75.1
Msa1310550 MtrunA17_Chr1g0165211 27.900 319 143 14 163 405 651 958 3.85e-15 78.6
Msa1310550 MtrunA17_Chr1g0176281 30.000 170 99 4 117 270 34 199 6.87e-15 73.9
Msa1310550 MtrunA17_Chr1g0176291 30.000 170 99 4 117 270 34 199 6.87e-15 73.9
Msa1310550 MtrunA17_Chr4g0073471 27.124 306 170 9 119 381 29 324 7.40e-15 77.4
Msa1310550 MtrunA17_Chr8g0366461 31.953 169 96 4 112 264 31 196 1.31e-14 77.0
Msa1310550 MtrunA17_Chr5g0409041 27.863 262 146 9 158 391 91 337 1.33e-14 76.6
Msa1310550 MtrunA17_Chr4g0051961 32.278 158 89 2 166 305 656 813 1.60e-14 76.6
Msa1310550 MtrunA17_Chr7g0243401 33.333 177 93 3 162 319 144 314 2.00e-14 76.3
Msa1310550 MtrunA17_Chr8g0363131 28.500 200 124 4 88 270 1 198 2.04e-14 73.9
Msa1310550 MtrunA17_Chr6g0487031 29.661 236 120 8 161 377 503 711 2.32e-14 76.3
Msa1310550 MtrunA17_Chr7g0250471 27.517 298 164 10 163 412 529 822 2.66e-14 75.9
Msa1310550 MtrunA17_Chr8g0360851 30.645 186 110 4 103 271 19 202 3.06e-14 75.9
Msa1310550 MtrunA17_Chr4g0006931 36.364 154 78 4 177 312 85 236 3.62e-14 73.2
Msa1310550 MtrunA17_Chr6g0456231 30.220 182 117 5 297 476 404 577 4.67e-14 74.7
Msa1310550 MtrunA17_Chr4g0052921 26.349 315 146 10 150 379 670 983 4.72e-14 75.5
Msa1310550 MtrunA17_Chr1g0200911 32.768 177 94 7 122 278 34 205 5.34e-14 74.7
Msa1310550 MtrunA17_Chr1g0200911 28.758 153 107 2 326 476 430 582 7.05e-11 64.7
Msa1310550 MtrunA17_Chr2g0278831 30.719 153 104 2 326 476 419 571 6.81e-14 74.3
Msa1310550 MtrunA17_Chr2g0278831 30.968 310 141 14 122 381 36 322 1.12e-13 73.6
Msa1310550 MtrunA17_Chr3g0127671 32.759 174 98 4 107 264 57 227 7.15e-14 74.7
Msa1310550 MtrunA17_Chr3g0127671 25.714 315 157 11 173 423 488 789 2.78e-11 66.2
Msa1310550 MtrunA17_Chr8g0388991 26.199 271 142 9 99 318 13 276 7.21e-14 74.3
Msa1310550 MtrunA17_Chr8g0361231 31.500 200 115 5 91 270 1 198 7.90e-14 74.7
Msa1310550 MtrunA17_Chr0c03g0490031 36.190 105 66 1 372 476 471 574 1.06e-13 73.6
Msa1310550 MtrunA17_Chr7g0250381 26.866 268 140 9 163 379 528 790 1.10e-13 73.9
Msa1310550 MtrunA17_Chr4g0003071 41.441 111 46 3 187 279 1 110 1.11e-13 69.7
Msa1310550 MtrunA17_Chr8g0363251 29.730 185 111 4 103 270 37 219 1.23e-13 70.9
Msa1310550 MtrunA17_Chr1g0174251 33.594 128 75 3 161 286 117 236 1.44e-13 73.2
Msa1310550 MtrunA17_Chr1g0176301 25.405 370 223 12 163 500 248 596 1.44e-13 73.6
Msa1310550 MtrunA17_Chr7g0215011 37.778 135 62 3 162 275 130 263 1.57e-13 73.6
Msa1310550 MtrunA17_Chr6g0464211 32.934 167 92 5 115 264 39 202 1.79e-13 73.6
Msa1310550 MtrunA17_Chr6g0464211 26.562 256 121 8 173 374 488 730 1.50e-11 67.4
Msa1310550 MtrunA17_Chr3g0113221 29.714 175 103 3 110 268 28 198 1.85e-13 73.2
Msa1310550 MtrunA17_Chr3g0113221 31.050 219 129 7 166 376 520 724 5.43e-11 65.5
Msa1310550 MtrunA17_Chr7g0215061 29.644 253 139 8 166 387 312 556 1.91e-13 73.2
Msa1310550 MtrunA17_Chr7g0215681 35.135 148 57 2 162 270 158 305 1.95e-13 73.2
Msa1310550 MtrunA17_Chr7g0215681 36.000 125 66 4 135 259 208 318 1.86e-11 66.6
Msa1310550 MtrunA17_Chr1g0165221 28.369 282 135 10 163 386 608 880 2.20e-13 73.2
Msa1310550 MtrunA17_Chr1g0165221 33.514 185 80 4 115 259 34 215 4.33e-13 72.0
Msa1310550 MtrunA17_Chr8g0357171 36.641 131 63 3 162 273 210 339 2.21e-13 73.2
Msa1310550 MtrunA17_Chr8g0357171 31.847 157 84 4 132 270 86 237 1.25e-11 67.4
Msa1310550 MtrunA17_Chr8g0363691 29.189 185 112 4 103 270 16 198 2.39e-13 73.2
Msa1310550 MtrunA17_Chr5g0408401 27.306 271 140 8 162 384 244 505 2.47e-13 72.8
Msa1310550 MtrunA17_Chr3g0127701 31.937 191 87 5 109 259 17 204 3.11e-13 72.4
Msa1310550 MtrunA17_Chr8g0363631 29.412 187 113 4 103 272 37 221 3.28e-13 69.7
Msa1310550 MtrunA17_Chr4g0072901 38.043 92 55 1 383 474 226 315 3.51e-13 71.2
Msa1310550 MtrunA17_Chr8g0357191 29.936 157 87 4 132 270 85 236 3.61e-13 72.4
Msa1310550 MtrunA17_Chr8g0357191 38.400 125 60 2 162 270 161 284 1.27e-12 70.5
Msa1310550 MtrunA17_Chr8g0357191 35.252 139 69 3 152 270 123 260 1.72e-12 70.1
Msa1310550 MtrunA17_Chr7g0232451 34.225 187 75 6 127 270 61 242 3.97e-13 72.4
Msa1310550 MtrunA17_Chr3g0095201 26.005 373 218 10 163 500 496 845 4.13e-13 72.0
Msa1310550 MtrunA17_Chr4g0013511 30.233 172 100 4 117 272 33 200 4.28e-13 69.7
Msa1310550 MtrunA17_Chr8g0362861 28.042 189 113 5 103 272 16 200 4.29e-13 68.6
Msa1310550 MtrunA17_Chr7g0233881 29.694 229 141 8 162 379 472 691 4.55e-13 72.0
Msa1310550 MtrunA17_Chr7g0233881 30.052 193 84 7 127 273 54 241 8.00e-11 64.7
Msa1310550 MtrunA17_Chr1g0165901 31.818 198 87 7 115 270 98 289 4.73e-13 72.0
Msa1310550 MtrunA17_Chr1g0165901 26.103 272 140 10 170 386 726 991 7.78e-12 68.2
Msa1310550 MtrunA17_Chr8g0375511 29.268 164 98 5 326 475 967 1126 5.16e-13 72.0
Msa1310550 MtrunA17_Chr8g0375511 28.807 243 114 8 190 375 617 857 9.39e-13 71.2
Msa1310550 MtrunA17_Chr5g0403401 29.688 192 115 4 91 264 1 190 5.28e-13 72.0
Msa1310550 MtrunA17_Chr8g0362961 30.601 183 108 4 103 268 17 197 6.12e-13 71.6
Msa1310550 MtrunA17_Chr7g0250491 28.287 251 148 9 165 399 590 824 6.69e-13 71.6
Msa1310550 MtrunA17_Chr8g0362951 28.877 187 110 5 103 270 16 198 6.87e-13 68.2
Msa1310550 MtrunA17_Chr5g0408801 28.261 230 126 7 166 379 530 736 7.26e-13 71.2
Msa1310550 MtrunA17_Chr1g0169841 27.711 249 146 5 166 381 589 836 7.44e-13 71.2
Msa1310550 MtrunA17_Chr1g0165891 27.437 277 130 11 170 386 158 423 7.45e-13 71.2
Msa1310550 MtrunA17_Chr1g0165281 27.734 256 149 8 161 386 423 672 9.26e-13 70.9
Msa1310550 MtrunA17_Chr1g0165281 27.160 243 124 7 74 273 24 256 7.07e-12 68.2
Msa1310550 MtrunA17_Chr1g0165241 27.734 256 149 8 161 386 423 672 9.26e-13 70.9
Msa1310550 MtrunA17_Chr1g0165241 27.160 243 124 7 74 273 24 256 7.07e-12 68.2
Msa1310550 MtrunA17_Chr1g0165311 27.734 256 149 8 161 386 423 672 9.26e-13 70.9
Msa1310550 MtrunA17_Chr1g0165311 27.160 243 124 7 74 273 24 256 7.07e-12 68.2
Msa1310550 MtrunA17_Chr3g0108351 35.119 168 92 7 118 278 37 194 9.73e-13 70.9
Msa1310550 MtrunA17_Chr8g0363311 29.189 185 112 4 103 270 37 219 1.01e-12 68.2
Msa1310550 MtrunA17_Chr4g0006961 37.121 132 64 4 166 279 145 275 1.19e-12 70.5
Msa1310550 MtrunA17_Chr7g0215641 38.583 127 61 2 162 272 114 239 1.26e-12 70.5
Msa1310550 MtrunA17_Chr7g0215641 38.393 112 53 2 162 260 258 366 2.50e-11 66.2
Msa1310550 MtrunA17_Chr4g0058861 35.443 158 79 3 173 308 735 891 1.29e-12 70.5
Msa1310550 MtrunA17_Chr4g0058861 36.090 133 65 3 161 274 147 278 7.67e-12 68.2
Msa1310550 MtrunA17_Chr4g0074031 35.052 97 63 0 379 475 750 846 1.42e-12 70.5
Msa1310550 MtrunA17_Chr5g0398741 27.863 262 106 10 101 285 3 258 1.45e-12 70.1
Msa1310550 MtrunA17_Chr5g0446891 30.870 230 127 8 166 376 300 516 1.48e-12 70.1
Msa1310550 MtrunA17_Chr1g0151041 27.737 274 134 9 166 381 379 646 1.58e-12 70.5
Msa1310550 MtrunA17_Chr1g0151041 34.351 131 66 3 163 274 328 457 4.68e-12 68.9
Msa1310550 MtrunA17_Chr3g0123891 26.897 290 164 10 122 378 32 306 1.69e-12 69.7
Msa1310550 MtrunA17_Chr2g0284151 29.572 257 132 11 156 381 314 552 1.73e-12 70.1
Msa1310550 MtrunA17_Chr1g0165261 26.645 304 147 11 163 403 70 360 1.81e-12 69.7
Msa1310550 MtrunA17_Chr6g0476611 27.132 258 117 8 118 307 29 283 1.83e-12 69.7
Msa1310550 MtrunA17_Chr4g0006861 40.625 128 57 3 187 296 831 957 1.94e-12 70.1
Msa1310550 MtrunA17_Chr8g0357151 36.000 125 63 2 162 270 269 392 2.02e-12 70.1
Msa1310550 MtrunA17_Chr8g0357151 35.156 128 66 2 159 270 218 344 4.72e-12 68.9
Msa1310550 MtrunA17_Chr8g0357151 35.200 125 64 2 162 270 173 296 1.31e-11 67.4
Msa1310550 MtrunA17_Chr8g0357151 34.400 125 65 2 162 270 197 320 4.52e-11 65.9
Msa1310550 MtrunA17_Chr7g0261901 32.727 165 87 4 166 306 388 552 2.12e-12 69.7
Msa1310550 MtrunA17_Chr0c09g0493541 28.774 212 127 6 95 293 4 204 2.16e-12 67.4
Msa1310550 MtrunA17_Chr8g0385051 30.719 153 103 3 326 476 399 550 2.20e-12 69.3
Msa1310550 MtrunA17_Chr8g0385051 28.090 267 151 10 128 378 52 293 2.76e-12 69.3
Msa1310550 MtrunA17_Chr2g0284191 28.295 258 122 11 163 381 354 587 2.27e-12 69.7
Msa1310550 MtrunA17_Chr5g0408611 30.247 162 95 3 113 258 25 184 2.43e-12 69.7
Msa1310550 MtrunA17_Chr8g0369221 33.523 176 88 7 103 259 14 179 2.46e-12 68.2
Msa1310550 MtrunA17_Chr2g0278851 30.065 153 104 3 326 476 397 548 2.79e-12 68.9
Msa1310550 MtrunA17_Chr8g0393211 29.688 192 91 8 141 293 54 240 3.01e-12 69.3
Msa1310550 MtrunA17_Chr5g0408621 28.415 183 113 3 98 264 57 237 3.18e-12 69.3
Msa1310550 MtrunA17_Chr5g0437741 31.250 160 94 5 116 272 72 218 3.26e-12 69.3
Msa1310550 MtrunA17_Chr4g0060011 26.389 216 137 4 89 286 1 212 3.38e-12 68.9
Msa1310550 MtrunA17_Chr2g0312651 28.629 248 137 6 166 377 584 827 3.55e-12 69.3
Msa1310550 MtrunA17_Chr1g0165951 27.698 278 126 11 170 386 490 753 3.77e-12 69.3
Msa1310550 MtrunA17_Chr1g0165951 29.864 221 107 6 92 268 3 219 1.11e-11 67.8
Msa1310550 MtrunA17_Chr5g0408741 25.448 279 128 7 162 374 371 635 3.96e-12 68.9
Msa1310550 MtrunA17_Chr4g0006451 40.625 96 50 1 166 261 74 162 3.99e-12 68.6
Msa1310550 MtrunA17_Chr5g0413291 29.032 155 107 3 339 491 441 594 4.13e-12 68.6
Msa1310550 MtrunA17_Chr5g0413291 26.403 303 168 11 115 375 30 319 5.51e-12 68.2
Msa1310550 MtrunA17_Chr2g0304271 37.008 127 67 3 163 285 59 176 4.52e-12 66.2
Msa1310550 MtrunA17_Chr1g0165191 26.523 279 144 9 163 386 631 903 4.63e-12 68.9
Msa1310550 MtrunA17_Chr1g0201241 30.519 154 90 2 175 311 512 665 4.72e-12 68.9
Msa1310550 MtrunA17_Chr3g0125631 31.933 119 78 2 372 490 244 359 4.93e-12 67.4
Msa1310550 MtrunA17_Chr4g0006921 35.115 131 67 3 166 279 141 270 5.20e-12 67.4
Msa1310550 MtrunA17_Chr2g0278861 30.508 177 118 4 302 476 394 567 5.26e-12 68.2
Msa1310550 MtrunA17_Chr2g0278871 35.238 105 68 0 372 476 468 572 5.29e-12 68.2
Msa1310550 MtrunA17_Chr5g0408811 29.661 236 129 9 166 374 481 706 5.43e-12 68.6
Msa1310550 MtrunA17_Chr5g0408811 31.737 167 94 5 115 264 15 178 6.30e-11 65.1
Msa1310550 MtrunA17_Chr7g0259171 32.544 169 88 5 119 265 25 189 5.53e-12 67.4
Msa1310550 MtrunA17_Chr2g0282601 28.497 193 116 7 119 301 376 556 5.91e-12 68.2
Msa1310550 MtrunA17_Chr4g0049161 38.889 90 45 2 381 469 196 276 6.54e-12 66.6
Msa1310550 MtrunA17_Chr7g0248491 29.710 138 93 3 339 474 299 434 6.66e-12 67.8
Msa1310550 MtrunA17_Chr2g0301071 31.548 168 77 5 186 318 118 282 6.66e-12 67.8
Msa1310550 MtrunA17_Chr7g0245171 31.694 183 93 7 152 311 60 233 6.98e-12 67.8
Msa1310550 MtrunA17_Chr4g0018651 30.935 139 85 3 163 299 506 635 7.31e-12 68.2
Msa1310550 MtrunA17_Chr5g0432851 30.303 165 85 6 127 274 64 215 7.42e-12 67.8
Msa1310550 MtrunA17_Chr7g0265601 29.500 200 92 9 132 288 42 235 7.49e-12 67.8
Msa1310550 MtrunA17_Chr6g0464161 26.549 226 131 7 163 374 256 460 7.55e-12 68.2
Msa1310550 MtrunA17_Chr4g0006901 35.526 152 78 4 179 312 510 659 8.00e-12 67.8
Msa1310550 MtrunA17_Chr8g0369211 32.044 181 94 7 98 259 9 179 8.93e-12 67.8
Msa1310550 MtrunA17_Chr4g0012841 33.571 140 75 3 150 272 277 415 9.58e-12 67.8
Msa1310550 MtrunA17_Chr1g0165231 25.942 451 224 20 34 403 500 921 1.03e-11 67.8
Msa1310550 MtrunA17_Chr1g0165301 25.942 451 224 20 34 403 500 921 1.03e-11 67.8
Msa1310550 MtrunA17_Chr2g0304331 39.669 121 60 3 163 279 897 1008 1.04e-11 67.8
Msa1310550 MtrunA17_Chr1g0165141 26.165 279 145 9 163 386 608 880 1.15e-11 67.8
Msa1310550 MtrunA17_Chr5g0446221 40.566 106 52 3 175 278 59 155 1.16e-11 63.9
Msa1310550 MtrunA17_Chr1g0165971 28.571 245 136 9 162 386 583 808 1.17e-11 67.4
Msa1310550 MtrunA17_Chr1g0165971 32.620 187 79 6 115 259 34 215 5.16e-11 65.5
Msa1310550 MtrunA17_Chr5g0443121 27.000 200 133 6 287 484 276 464 1.22e-11 67.0
Msa1310550 MtrunA17_Chr7g0262141 37.864 103 59 3 372 472 887 986 1.27e-11 67.4
Msa1310550 MtrunA17_Chr8g0386631 30.108 186 104 6 119 280 28 211 1.27e-11 67.0
Msa1310550 MtrunA17_Chr1g0190411 33.721 172 82 8 166 324 513 665 1.36e-11 67.4
Msa1310550 MtrunA17_Chr8g0362881 30.636 173 101 4 113 268 26 196 1.41e-11 64.3
Msa1310550 MtrunA17_Chr7g0215671 27.636 275 164 9 166 421 253 511 1.41e-11 67.0
Msa1310550 MtrunA17_Chr7g0215671 34.286 140 72 5 163 285 203 339 6.25e-11 65.1
Msa1310550 MtrunA17_Chr6g0464151 32.335 167 93 5 115 264 39 202 1.51e-11 64.7
Msa1310550 MtrunA17_Chr5g0407241 27.273 275 125 11 166 381 486 744 1.64e-11 67.0
Msa1310550 MtrunA17_Chr1g0179521 33.333 144 77 4 166 291 93 235 1.70e-11 66.6
Msa1310550 MtrunA17_Chr2g0283921 39.200 125 57 3 183 289 694 817 1.71e-11 67.0
Msa1310550 MtrunA17_Chr5g0440621 34.239 184 92 8 123 284 32 208 1.76e-11 63.9
Msa1310550 MtrunA17_Chr7g0231541 30.739 257 144 10 162 400 244 484 1.78e-11 66.6
Msa1310550 MtrunA17_Chr5g0396941 31.061 132 85 3 348 475 443 572 1.79e-11 66.6
Msa1310550 MtrunA17_Chr2g0285811 37.273 110 52 2 166 259 166 274 1.83e-11 66.2
Msa1310550 MtrunA17_Chr7g0215631 36.364 121 60 2 166 270 150 269 2.01e-11 66.6
Msa1310550 MtrunA17_Chr7g0222861 29.293 198 112 7 119 291 31 225 2.05e-11 63.9
Msa1310550 MtrunA17_Chr8g0354041 36.364 121 66 3 168 286 706 817 2.05e-11 66.6
Msa1310550 MtrunA17_Chr8g0348451 27.485 171 108 5 343 509 286 444 2.08e-11 66.2
Msa1310550 MtrunA17_Chr2g0313911 34.783 138 82 3 339 472 210 343 2.10e-11 65.5
Msa1310550 MtrunA17_Chr7g0222321 33.333 102 65 1 374 475 907 1005 2.28e-11 66.6
Msa1310550 MtrunA17_Chr7g0250351 26.236 263 137 8 163 375 323 578 2.30e-11 66.6
Msa1310550 MtrunA17_Chr5g0408581 30.000 170 101 3 111 264 36 203 2.58e-11 66.6
Msa1310550 MtrunA17_Chr2g0324931 31.915 188 103 8 117 283 25 208 2.71e-11 66.2
Msa1310550 MtrunA17_Chr0c01g0489481 30.556 144 91 4 339 476 467 607 2.88e-11 65.9
Msa1310550 MtrunA17_Chr6g0488781 33.668 199 102 7 118 293 32 223 3.01e-11 63.5
Msa1310550 MtrunA17_Chr4g0022051 31.325 166 102 4 150 312 138 294 3.02e-11 64.7
Msa1310550 MtrunA17_Chr4g0005411 29.878 164 93 3 144 288 127 287 3.18e-11 65.9
Msa1310550 MtrunA17_Chr3g0096351 27.500 200 132 6 287 484 274 462 3.49e-11 65.5
Msa1310550 MtrunA17_Chr5g0393671 33.548 155 80 6 123 259 32 181 3.52e-11 62.8
Msa1310550 MtrunA17_Chr8g0363061 27.807 187 116 4 103 272 16 200 3.54e-11 65.9
Msa1310550 MtrunA17_Chr4g0006421 35.417 144 74 3 187 312 838 980 3.77e-11 65.9
Msa1310550 MtrunA17_Chr0c09g0493531 25.490 306 165 8 156 422 356 637 3.80e-11 65.9
Msa1310550 MtrunA17_Chr7g0232171 29.921 254 151 7 162 400 615 856 3.86e-11 65.9
Msa1310550 MtrunA17_Chr1g0183231 35.652 115 65 3 372 480 878 989 4.23e-11 65.9
Msa1310550 MtrunA17_Chr4g0006941 35.811 148 73 4 186 312 802 948 4.25e-11 65.9
Msa1310550 MtrunA17_Chr1g0209211 31.579 152 81 3 166 294 144 295 4.31e-11 65.5
Msa1310550 MtrunA17_Chr7g0244931 38.793 116 60 3 166 279 449 555 4.34e-11 65.9
Msa1310550 MtrunA17_Chr5g0408571 29.130 230 123 9 166 378 8 214 4.52e-11 65.1
Msa1310550 MtrunA17_Chr7g0257621 33.065 124 65 2 173 278 386 509 4.53e-11 65.5
Msa1310550 MtrunA17_Chr3g0097001 33.607 122 63 3 163 268 92 211 4.56e-11 65.5
Msa1310550 MtrunA17_Chr7g0261331 38.400 125 60 2 162 270 391 514 4.60e-11 65.9
Msa1310550 MtrunA17_Chr3g0140871 28.364 275 136 9 161 381 425 692 4.63e-11 65.5
Msa1310550 MtrunA17_Chr7g0232131 30.739 257 144 10 162 400 711 951 4.97e-11 65.5
Msa1310550 MtrunA17_Chr1g0189871 33.571 140 84 6 339 472 940 1076 5.31e-11 65.5
Msa1310550 MtrunA17_Chr1g0189871 26.613 248 137 6 166 379 581 817 7.38e-11 65.1
Msa1310550 MtrunA17_Chr8g0372861 38.168 131 70 3 161 289 696 817 5.67e-11 65.5
Msa1310550 MtrunA17_Chr5g0419221 32.164 171 96 5 111 264 35 202 5.73e-11 65.5
Msa1310550 MtrunA17_Chr8g0363371 28.452 239 129 8 163 371 304 530 5.83e-11 65.1
Msa1310550 MtrunA17_Chr3g0128551 30.667 150 96 4 328 475 471 614 5.97e-11 65.1
Msa1310550 MtrunA17_Chr3g0128731 28.261 184 87 6 119 259 42 223 6.66e-11 65.1
Msa1310550 MtrunA17_Chr4g0046511 35.398 113 55 2 163 259 264 374 6.80e-11 65.1
Msa1310550 MtrunA17_Chr2g0314991 33.628 113 66 2 163 275 656 759 7.37e-11 65.1
Msa1310550 MtrunA17_Chr3g0134221 35.233 193 74 9 129 278 62 246 7.41e-11 64.7
Msa1310550 MtrunA17_Chr5g0402071 26.923 156 110 3 326 479 292 445 7.41e-11 64.3
Msa1310550 MtrunA17_Chr1g0165921 26.712 292 145 12 170 403 390 670 8.05e-11 64.7
Msa1310550 MtrunA17_Chr1g0165921 30.435 184 83 5 127 268 35 215 8.86e-11 64.7
Msa1310550 MtrunA17_Chr1g0196341 31.515 165 87 5 119 261 32 192 8.18e-11 63.9
Msa1310550 MtrunA17_Chr5g0428541 28.191 188 117 6 293 475 413 587 8.48e-11 64.3
Msa1310550 MtrunA17_Chr6g0486961 29.630 324 166 15 166 461 497 786 8.62e-11 64.7
Msa1310550 MtrunA17_Chr7g0222221 32.353 102 66 1 374 475 199 297 8.68e-11 63.2
Msa1310550 MtrunA17_Chr2g0304481 35.938 128 68 4 163 286 851 968 8.93e-11 64.7
Msa1310550 MtrunA17_Chr8g0354061 30.872 149 92 3 166 312 705 844 8.98e-11 64.7
Msa1310550 MtrunA17_Chr6g0469721 36.134 119 64 4 163 279 17 125 9.68e-11 61.2
Msa1310550 MtrunA17_Chr2g0282831 28.175 252 142 10 177 402 466 704 9.69e-11 64.7
Msa1310550 MtrunA17_Chr7g0232211 31.466 232 134 8 162 379 606 826 9.78e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1310550 AT5G48380.1 49.324 296 107 8 117 374 29 319 8.81e-80 261
Msa1310550 AT5G48380.1 52.747 182 70 4 339 506 441 620 3.53e-47 173
Msa1310550 AT3G28450.1 38.006 321 156 9 104 386 18 333 4.13e-53 189
Msa1310550 AT3G28450.1 38.854 157 81 4 339 486 441 591 5.40e-24 106
Msa1310550 AT1G69990.1 34.295 312 160 9 106 375 4 312 8.02e-46 169
Msa1310550 AT1G69990.1 46.018 113 61 0 372 484 463 575 1.14e-28 120
Msa1310550 AT1G27190.1 34.462 325 168 8 89 375 1 318 1.37e-41 157
Msa1310550 AT1G27190.1 43.836 146 77 2 339 479 438 583 2.94e-31 127
Msa1310550 AT3G49750.1 35.593 177 88 5 112 266 21 193 1.67e-22 97.8
Msa1310550 AT3G49750.2 35.928 167 81 5 112 256 21 183 7.45e-20 87.8
Msa1310550 AT5G65830.1 35.119 168 81 6 115 259 31 193 6.66e-19 87.4
Msa1310550 AT2G02220.1 30.055 183 117 4 292 472 832 1005 6.82e-19 90.9
Msa1310550 AT2G02220.1 30.213 235 131 8 166 376 528 753 6.44e-11 65.5
Msa1310550 AT5G53890.1 29.282 181 117 4 297 475 857 1028 9.64e-18 87.4
Msa1310550 AT5G07280.1 25.672 335 161 7 162 427 653 968 1.29e-17 87.0
Msa1310550 AT5G07280.1 33.553 152 98 2 326 475 1042 1192 1.32e-15 80.5
Msa1310550 AT2G01950.1 30.992 242 109 7 190 375 616 855 8.34e-17 84.3
Msa1310550 AT2G01950.1 27.586 174 103 4 326 480 965 1134 1.66e-13 73.9
Msa1310550 AT3G13380.1 30.104 289 153 11 146 399 623 897 2.62e-16 82.8
Msa1310550 AT3G13380.1 35.514 107 62 3 372 475 1033 1135 6.03e-14 75.5
Msa1310550 AT5G16000.1 27.687 307 168 10 115 378 37 332 6.60e-16 81.3
Msa1310550 AT1G55610.1 33.468 248 108 11 168 375 646 876 1.32e-15 80.5
Msa1310550 AT1G55610.1 29.167 168 108 5 326 488 986 1147 1.22e-14 77.4
Msa1310550 AT1G55610.2 33.468 248 108 11 168 375 646 876 1.32e-15 80.5
Msa1310550 AT1G55610.2 29.167 168 108 5 326 488 986 1147 1.22e-14 77.4
Msa1310550 AT4G39400.1 28.571 252 122 7 183 377 652 902 1.58e-15 80.5
Msa1310550 AT4G39400.1 28.902 173 112 5 326 492 1008 1175 4.25e-14 75.9
Msa1310550 AT1G72300.1 35.780 109 68 2 372 480 976 1082 2.04e-15 80.1
Msa1310550 AT1G72300.1 34.677 124 67 2 141 258 72 187 2.68e-11 67.0
Msa1310550 AT4G30520.1 25.915 328 184 11 87 370 3 315 2.42e-15 79.3
Msa1310550 AT1G67510.1 36.601 153 78 2 162 295 145 297 3.44e-15 79.0
Msa1310550 AT3G02880.1 31.771 192 101 7 103 274 13 194 4.39e-15 78.6
Msa1310550 AT4G20140.1 28.364 275 134 8 162 375 696 968 1.17e-14 77.8
Msa1310550 AT1G34210.1 33.898 177 92 7 122 278 35 206 1.52e-14 76.6
Msa1310550 AT1G34210.1 29.412 170 116 3 326 491 431 600 3.16e-12 69.3
Msa1310550 AT1G34210.2 33.898 177 92 7 122 278 35 206 1.52e-14 76.6
Msa1310550 AT1G34210.2 29.412 170 116 3 326 491 431 600 3.16e-12 69.3
Msa1310550 AT3G25560.3 25.723 311 160 8 115 374 38 328 2.14e-14 76.3
Msa1310550 AT3G25560.3 29.341 167 113 4 312 476 422 585 1.07e-12 70.9
Msa1310550 AT3G25560.1 25.723 311 160 8 115 374 38 328 2.49e-14 76.3
Msa1310550 AT3G25560.1 29.341 167 113 4 312 476 422 585 1.35e-12 70.9
Msa1310550 AT3G25560.2 25.641 312 160 8 115 374 38 329 2.65e-14 76.3
Msa1310550 AT3G25560.2 29.341 167 113 4 312 476 423 586 1.19e-12 70.9
Msa1310550 AT5G62710.1 24.521 261 144 8 95 312 3 253 5.58e-14 75.1
Msa1310550 AT4G22730.2 32.386 176 95 7 104 259 10 181 7.00e-14 74.3
Msa1310550 AT3G47580.1 25.175 286 137 10 154 379 456 724 8.55e-14 74.7
Msa1310550 AT2G45340.1 36.943 157 74 6 123 259 30 181 9.04e-14 74.3
Msa1310550 AT2G23950.1 30.508 177 117 5 302 476 400 572 1.01e-13 74.3
Msa1310550 AT5G63930.1 27.490 251 142 7 166 382 582 826 1.71e-13 73.9
Msa1310550 AT5G63930.2 27.490 251 142 7 166 382 518 762 2.37e-13 73.6
Msa1310550 AT2G01210.1 33.333 141 75 2 166 287 141 281 3.71e-13 72.4
Msa1310550 AT1G60800.1 29.670 182 118 5 297 476 405 578 4.02e-13 72.4
Msa1310550 AT1G71830.1 33.333 177 93 7 122 278 32 203 4.06e-13 72.4
Msa1310550 AT1G71830.1 30.588 170 114 3 326 491 428 597 5.91e-13 71.6
Msa1310550 AT1G60800.2 29.670 182 118 5 297 476 338 511 4.21e-13 72.0
Msa1310550 AT5G55830.1 31.034 174 109 6 305 472 471 639 5.47e-13 72.0
Msa1310550 AT4G33430.1 30.719 153 104 2 326 476 415 567 6.16e-13 71.6
Msa1310550 AT4G33430.1 28.228 333 152 15 98 378 12 309 2.49e-11 66.6
Msa1310550 AT4G33430.2 30.719 153 104 2 326 476 462 614 6.33e-13 71.6
Msa1310550 AT4G28650.1 33.540 161 83 4 173 310 488 647 6.44e-13 72.0
Msa1310550 AT2G25790.1 31.841 201 105 9 98 274 12 204 6.71e-13 72.0
Msa1310550 AT2G25790.1 30.516 213 107 8 162 335 479 689 2.00e-12 70.5
Msa1310550 AT3G25490.1 36.283 113 67 3 372 481 280 390 7.25e-13 70.9
Msa1310550 AT3G53380.1 35.616 146 77 3 372 502 547 690 7.86e-13 71.6
Msa1310550 AT3G56370.1 31.447 159 89 4 119 259 28 184 8.87e-13 71.6
Msa1310550 AT3G56370.1 35.185 162 82 4 135 275 112 271 1.32e-11 67.8
Msa1310550 AT3G17420.1 26.943 193 130 5 284 474 244 427 1.02e-12 70.5
Msa1310550 AT5G18500.2 29.630 162 108 4 326 485 291 448 1.07e-12 70.5
Msa1310550 AT5G18500.5 29.630 162 108 4 326 485 291 448 1.07e-12 70.5
Msa1310550 AT5G18500.4 29.630 162 108 4 326 485 291 448 1.07e-12 70.5
Msa1310550 AT5G18500.1 29.630 162 108 4 326 485 291 448 1.07e-12 70.5
Msa1310550 AT5G18500.3 29.630 162 108 4 326 485 291 448 1.07e-12 70.5
Msa1310550 AT5G18500.6 29.630 162 108 4 326 485 291 448 1.07e-12 70.5
Msa1310550 AT2G13790.1 28.431 306 144 14 122 378 35 314 2.15e-12 70.1
Msa1310550 AT2G13790.1 28.758 153 107 2 326 476 420 572 1.52e-11 67.4
Msa1310550 AT5G20480.1 28.428 299 159 12 166 423 494 778 2.30e-12 70.1
Msa1310550 AT5G20480.2 28.428 299 159 12 166 423 494 778 2.30e-12 70.1
Msa1310550 AT2G24230.1 34.615 104 67 1 377 480 750 852 2.54e-12 70.1
Msa1310550 AT2G24230.1 26.667 240 126 6 166 370 334 558 6.37e-11 65.5
Msa1310550 AT5G46330.2 38.182 110 51 2 166 259 508 616 2.60e-12 70.1
Msa1310550 AT5G46330.2 34.815 135 70 2 163 279 651 785 2.58e-11 67.0
Msa1310550 AT5G46330.2 31.098 164 89 4 137 278 356 517 3.09e-11 66.6
Msa1310550 AT5G46330.1 38.182 110 51 2 166 259 508 616 2.60e-12 70.1
Msa1310550 AT5G46330.1 34.815 135 70 2 163 279 651 785 2.58e-11 67.0
Msa1310550 AT5G46330.1 31.098 164 89 4 137 278 356 517 3.09e-11 66.6
Msa1310550 AT3G47570.1 28.470 281 153 9 136 381 458 725 3.56e-12 69.7
Msa1310550 AT4G08850.1 27.306 271 135 8 161 374 526 791 3.93e-12 69.7
Msa1310550 AT4G08850.2 27.306 271 135 8 161 374 526 791 3.98e-12 69.3
Msa1310550 AT1G34110.1 34.959 123 63 2 162 268 285 406 4.80e-12 69.3
Msa1310550 AT1G34110.2 34.959 123 63 2 162 268 285 406 5.14e-12 69.3
Msa1310550 AT5G37450.2 29.688 192 107 5 88 259 7 190 5.40e-12 68.9
Msa1310550 AT5G37450.3 29.688 192 107 5 88 259 7 190 5.49e-12 68.9
Msa1310550 AT4G22730.1 26.230 244 107 9 104 278 10 249 5.52e-12 68.9
Msa1310550 AT3G56100.2 34.437 151 69 4 159 280 195 344 5.84e-12 68.6
Msa1310550 AT1G35710.1 29.279 222 125 8 162 367 655 860 8.62e-12 68.6
Msa1310550 AT2G13800.4 30.000 140 96 2 339 476 297 436 1.25e-11 67.4
Msa1310550 AT2G13800.2 30.000 140 96 2 339 476 297 436 1.25e-11 67.4
Msa1310550 AT1G12460.2 34.211 114 72 2 362 475 627 737 1.31e-11 67.8
Msa1310550 AT1G12460.2 29.583 240 131 10 163 375 243 471 3.58e-11 66.2
Msa1310550 AT2G13800.3 30.000 140 96 2 339 476 414 553 1.39e-11 67.4
Msa1310550 AT2G13800.1 30.000 140 96 2 339 476 414 553 1.39e-11 67.4
Msa1310550 AT1G48480.1 32.468 154 82 5 138 273 51 200 1.47e-11 67.4
Msa1310550 AT1G12460.1 34.211 114 72 2 362 475 766 876 1.49e-11 67.8
Msa1310550 AT1G12460.1 29.583 240 131 10 163 375 382 610 2.71e-11 66.6
Msa1310550 AT5G51560.1 28.761 226 90 8 132 289 43 265 1.64e-11 67.4
Msa1310550 AT5G58150.1 27.778 270 146 10 150 376 277 540 1.81e-11 67.4
Msa1310550 AT1G74170.1 30.151 199 86 4 144 306 558 739 1.91e-11 67.4
Msa1310550 AT1G28340.1 26.108 203 126 7 119 310 376 565 1.92e-11 67.0
Msa1310550 AT2G41820.1 36.937 111 59 2 166 273 379 481 1.93e-11 67.4
Msa1310550 AT2G35620.3 30.481 187 112 7 293 474 400 573 2.06e-11 67.0
Msa1310550 AT2G35620.1 30.481 187 112 7 293 474 400 573 2.06e-11 67.0
Msa1310550 AT2G35620.2 30.481 187 112 7 293 474 400 573 2.06e-11 67.0
Msa1310550 AT2G35620.4 30.481 187 112 7 293 474 400 573 2.06e-11 67.0
Msa1310550 AT2G26330.1 33.158 190 98 7 123 289 30 213 2.16e-11 67.0
Msa1310550 AT1G74170.2 30.151 199 86 4 144 306 626 807 2.32e-11 67.0
Msa1310550 AT3G43740.1 32.418 182 98 7 123 284 34 210 2.48e-11 63.9
Msa1310550 AT5G21090.1 30.653 199 111 8 106 284 19 210 2.64e-11 63.9
Msa1310550 AT3G24240.1 36.667 120 56 3 173 273 406 524 2.67e-11 67.0
Msa1310550 AT4G20940.1 29.944 177 97 6 119 272 8 180 2.78e-11 67.0
Msa1310550 AT1G28440.1 31.868 182 82 7 119 272 19 186 3.04e-11 66.6
Msa1310550 AT5G45780.1 26.235 324 179 12 115 398 35 338 3.58e-11 66.2
Msa1310550 AT2G36570.1 26.190 210 98 6 132 294 36 235 3.70e-11 66.2
Msa1310550 AT1G21245.1 35.052 97 61 2 372 468 13 107 3.71e-11 62.4
Msa1310550 AT2G26730.1 30.000 180 106 5 141 303 47 223 4.54e-11 65.9
Msa1310550 AT1G03440.1 29.787 188 105 6 109 273 20 203 4.81e-11 65.1
Msa1310550 AT1G62950.1 36.207 116 64 3 163 278 387 492 6.65e-11 65.5
Msa1310550 AT2G25470.3 36.496 137 66 4 174 292 780 913 7.38e-11 65.5
Msa1310550 AT1G80870.1 33.684 95 62 1 381 474 570 664 7.42e-11 65.1
Msa1310550 AT3G45860.1 29.710 138 82 1 350 472 487 624 7.45e-11 65.1
Msa1310550 AT5G01950.7 30.357 168 100 6 118 278 31 188 7.65e-11 65.5
Msa1310550 AT2G25470.1 36.496 137 66 4 174 292 737 870 8.27e-11 65.1
Msa1310550 AT5G01950.3 30.357 168 100 6 118 278 31 188 8.32e-11 65.1
Msa1310550 AT5G01950.1 30.357 168 100 6 118 278 31 188 8.32e-11 65.1
Msa1310550 AT5G01950.4 30.357 168 100 6 118 278 31 188 8.32e-11 65.1
Msa1310550 AT5G01950.8 30.357 168 100 6 118 278 31 188 8.32e-11 65.1
Msa1310550 AT3G25010.2 36.800 125 68 3 166 288 737 852 9.18e-11 65.1

Find 94 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTTTGTGTTTAGGATTT+TGG 0.142606 8_4:-7145942 Msa1310550:CDS
GAATCTCAAATTATCAAATA+TGG 0.206418 8_4:-7145669 Msa1310550:CDS
TCCAAGTCTTCTCCCTTCTT+TGG 0.232320 8_4:-7146641 Msa1310550:CDS
AGATTTCCTTTAAAAGTTTC+CGG 0.241508 8_4:+7143451 None:intergenic
ATGAAATGGAAAATGGAAAT+TGG 0.248531 8_4:+7146588 None:intergenic
CTTGCCCATTTGTTTCCTTC+AGG 0.269809 8_4:+7145116 None:intergenic
TTGTGCGTCGCAGTGCTTAT+AGG 0.276918 8_4:-7145154 Msa1310550:intron
GGGTTTATATGTAGATTTAA+TGG 0.295617 8_4:-7145728 Msa1310550:intron
TAAAGGAACTAAAGGAATTA+AGG 0.296236 8_4:-7145087 Msa1310550:intron
CCAATATTTCATCTTCAGTT+TGG 0.305441 8_4:+7143227 None:intergenic
GAAGATGTCAAATAATTATT+CGG 0.307977 8_4:+7145776 None:intergenic
GGTGCTTTAGCCACATTTGC+AGG 0.308015 8_4:+7143472 None:intergenic
AAATGGGCAAGAAGTCTTAA+AGG 0.309464 8_4:-7145104 Msa1310550:CDS
CCAAACTGAAGATGAAATAT+TGG 0.309822 8_4:-7143227 Msa1310550:CDS
CCTTTGTGGTACATCTTCAT+TGG 0.311958 8_4:-7145288 Msa1310550:CDS
ATAATTATTTGACATCTTCA+TGG 0.317680 8_4:-7145772 Msa1310550:CDS
CTTTGTGGTACATCTTCATT+GGG 0.330089 8_4:-7145287 Msa1310550:CDS
TTGGTACCTGAAGATATTAT+TGG 0.331121 8_4:-7143208 Msa1310550:CDS
AACATGGTTGGCCTCTCCTT+TGG 0.341469 8_4:+7143295 None:intergenic
CTTTCGGTCAATGATCTATC+TGG 0.343710 8_4:-7145587 Msa1310550:CDS
GATCTATCTGGAACCATTCC+AGG 0.363303 8_4:-7145575 Msa1310550:CDS
GGTCAAATTCCTCTACTATT+AGG 0.366825 8_4:-7145419 Msa1310550:CDS
TTCAAGACTTTATTCTCATC+AGG 0.374269 8_4:+7145689 None:intergenic
TTAAAGGAAATCTCGTAGAA+TGG 0.407543 8_4:-7143441 Msa1310550:CDS
ATCATTGGTACAGGAAGAAC+AGG 0.415079 8_4:-7144063 Msa1310550:CDS
CATGACAGGATTAGATCTTT+CGG 0.427742 8_4:-7145603 Msa1310550:CDS
AAGATGTCAAATAATTATTC+GGG 0.431768 8_4:+7145777 None:intergenic
ATTAATTGTTCTAGCATGAC+AGG 0.433285 8_4:-7145617 Msa1310550:CDS
AATCTCAAATTATCAAATAT+GGG 0.436870 8_4:-7145668 Msa1310550:CDS
GCAAATAATCAAGGCCTTTG+TGG 0.450424 8_4:-7145302 Msa1310550:CDS
AAGATCCTGAAGGAAACAAA+TGG 0.451671 8_4:-7145121 Msa1310550:CDS
TTCAGTAATATCAATATCAT+TGG 0.453913 8_4:-7144078 Msa1310550:CDS
AGAAGCGTCGATATATCTCC+TGG 0.454716 8_4:+7145557 None:intergenic
TTATCACCAATAATATCTTC+AGG 0.460159 8_4:+7143202 None:intergenic
AGTAACACCGCAGTCATAGC+TGG 0.462457 8_4:-7145236 Msa1310550:CDS
TCCAAAGAAGGGAGAAGACT+TGG 0.462494 8_4:+7146640 None:intergenic
ATTATCAAATATGGGACTCA+AGG 0.470372 8_4:-7145660 Msa1310550:CDS
ATCTTCATTGGGGCTTTGCA+AGG 0.474908 8_4:-7145276 Msa1310550:CDS
TGGAAAATGGAAATTGGAAC+GGG 0.476023 8_4:+7146594 None:intergenic
TTAGCAGTGAAGTTTGGAAC+TGG 0.478124 8_4:+7145344 None:intergenic
ATTGATATTACTGAAGTTGT+TGG 0.482755 8_4:+7144086 None:intergenic
GTAAATTATGCAAATAATCA+AGG 0.482935 8_4:-7145311 Msa1310550:CDS
GATTTAATGGTGTTGAATGT+TGG 0.486576 8_4:-7145715 Msa1310550:CDS
TGTGGCTGTGCGGATTGAAT+TGG 0.490882 8_4:-7145999 Msa1310550:CDS
AGAAGTCTTAAAGGAACTAA+AGG 0.491030 8_4:-7145095 Msa1310550:CDS
AACTTTGGTTGCTACGCCAA+AGG 0.491196 8_4:-7143548 Msa1310550:CDS
ACTTTGGTTGCTACGCCAAA+GGG 0.494956 8_4:-7143547 Msa1310550:CDS
TATGACTGCGGTGTTACTCT+TGG 0.495707 8_4:+7145241 None:intergenic
TGGCCCGGTCAAAAGATTGT+TGG 0.501666 8_4:+7145364 None:intergenic
CACATTTGCAGGTCTTTCAC+CGG 0.502038 8_4:+7143483 None:intergenic
AATATCAATATCATTGGTAC+AGG 0.502686 8_4:-7144072 Msa1310550:CDS
TTTAGATGATAATGTGTGAA+AGG 0.505141 8_4:+7146541 None:intergenic
GTCATAGCTGGAGCTGCTGT+TGG 0.520880 8_4:-7145224 Msa1310550:CDS
AGATCCTGAAGGAAACAAAT+GGG 0.534275 8_4:-7145120 Msa1310550:CDS
TCTTCATTGGGGCTTTGCAA+GGG 0.538088 8_4:-7145275 Msa1310550:CDS
GAACTTATTGTTGCTAGAGA+AGG 0.538208 8_4:-7143169 Msa1310550:CDS
TGATATACTTCAAACATGGT+TGG 0.546349 8_4:+7143283 None:intergenic
AAATTGGAACGGGTCAAAGA+AGG 0.548961 8_4:+7146604 None:intergenic
TGCAAATGTGGCTAAAGCAC+CGG 0.549261 8_4:-7143470 Msa1310550:CDS
AATTTCAACAATAAAACTGA+AGG 0.552766 8_4:-7145749 Msa1310550:CDS
TTATCATCTAAATCTCTCAC+AGG 0.553323 8_4:-7146530 Msa1310550:intron
TCGCAGTGCTTATAGGAAGA+AGG 0.558972 8_4:-7145147 Msa1310550:intron
GATATCAGTTTCAGTCCCAT+AGG 0.561619 8_4:+7145835 None:intergenic
CGTCGATATATCTCCTGGAA+TGG 0.563125 8_4:+7145562 None:intergenic
ATTGGGGCTTTGCAAGGGCA+CGG 0.564664 8_4:-7145270 Msa1310550:CDS
GTGCTTCTCGAGTTGGTGAC+CGG 0.565650 8_4:-7143502 Msa1310550:CDS
ATGGAAAATGGAAATTGGAA+CGG 0.566864 8_4:+7146593 None:intergenic
ATTTCAACAATAAAACTGAA+GGG 0.569317 8_4:-7145748 Msa1310550:intron
AGTGAAGTTTGGAACTGGCC+CGG 0.569986 8_4:+7145349 None:intergenic
TTATCAAATATGGGACTCAA+GGG 0.575781 8_4:-7145659 Msa1310550:CDS
GTTGAGAAGTGACTCGTCGA+TGG 0.585675 8_4:+7143381 None:intergenic
GGAACGGGTCAAAGAAGGAA+AGG 0.600077 8_4:+7146609 None:intergenic
GAGGAATTTGACCGGTGAGT+CGG 0.608210 8_4:+7145429 None:intergenic
GAGATTGAGCGATCTCATGA+AGG 0.617636 8_4:-7144112 Msa1310550:CDS
TATTATTGGTGATAATAACA+TGG 0.620492 8_4:-7143194 Msa1310550:CDS
CTTAGTCAGAACCGACTCAC+CGG 0.621569 8_4:-7145440 Msa1310550:intron
TAATAGTAGAGGAATTTGAC+CGG 0.625543 8_4:+7145421 None:intergenic
CTGTGTTACAGAAGTTCCAA+AGG 0.626813 8_4:-7143311 Msa1310550:CDS
CGGTGAAAGACCTGCAAATG+TGG 0.629784 8_4:-7143482 Msa1310550:CDS
TCGAGAGTGCCTAATAGTAG+AGG 0.630160 8_4:+7145410 None:intergenic
TTACAGAAGTTCCAAAGGAG+AGG 0.643561 8_4:-7143306 Msa1310550:CDS
AAGAAGGAAGAAGATCCTGA+AGG 0.645174 8_4:-7145131 Msa1310550:CDS
AAACTGATATACTTCAAACA+TGG 0.649157 8_4:+7143279 None:intergenic
CTCAAGGGTCAGTTTCCTCG+TGG 0.651966 8_4:-7145644 Msa1310550:CDS
AGCAGCTCCAGCTATGACTG+CGG 0.652793 8_4:+7145229 None:intergenic
CAGGGTGTGATGTGGCTGTG+CGG 0.664696 8_4:-7146009 Msa1310550:CDS
GGTCACCAACTCGAGAAGCA+CGG 0.668771 8_4:+7143504 None:intergenic
TTTGTGGTACATCTTCATTG+GGG 0.670039 8_4:-7145286 Msa1310550:CDS
GAATTGGATACTAATAAACG+AGG 0.689676 8_4:-7145983 Msa1310550:CDS
GACGAGTCACTTCTCAACAA+AGG 0.693736 8_4:-7143376 Msa1310550:CDS
GTGACTCGTCGATGGCATCG+TGG 0.710035 8_4:+7143389 None:intergenic
TATTGGTGATAATAACATGG+TGG 0.711917 8_4:-7143191 Msa1310550:CDS
CCAATGAAGATGTACCACAA+AGG 0.729071 8_4:+7145288 None:intergenic
GAACAATTAATAATGCCACG+AGG 0.820632 8_4:+7145629 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATTAAATTTACTTAAA+TGG - chr8_4:7143664-7143683 Msa1310550:intron 10.0%
!! TGTATTAAATTTACTTAAAT+GGG - chr8_4:7143665-7143684 Msa1310550:intron 10.0%
!!! TATTTTGATTTTATTTTTCA+GGG - chr8_4:7143821-7143840 Msa1310550:intron 10.0%
!! ATTCTATTGAAAATATTTAA+AGG + chr8_4:7145204-7145223 None:intergenic 10.0%
!!! TGAAATTTTATCTTATAAAA+TGG + chr8_4:7145479-7145498 None:intergenic 10.0%
!!! CTATTTTGATTTTATTTTTC+AGG - chr8_4:7143820-7143839 Msa1310550:intron 15.0%
!! AATCTCAAATTATCAAATAT+GGG - chr8_4:7144180-7144199 Msa1310550:intron 15.0%
!! TTTATTATTAGAGTTGTTTA+TGG + chr8_4:7145105-7145124 None:intergenic 15.0%
!! AGAAAAAATGAAATGGAAAA+TGG + chr8_4:7143270-7143289 None:intergenic 20.0%
!! AGAAGAAAGAAAAAATGAAA+TGG + chr8_4:7143277-7143296 None:intergenic 20.0%
!!! ATATGTTAGTTTTACTTTGA+TGG - chr8_4:7143520-7143539 Msa1310550:CDS 20.0%
!!! TATGTTAGTTTTACTTTGAT+GGG - chr8_4:7143521-7143540 Msa1310550:CDS 20.0%
!! AAGATGTCAAATAATTATTC+GGG + chr8_4:7144074-7144093 None:intergenic 20.0%
!! GAAGATGTCAAATAATTATT+CGG + chr8_4:7144075-7144094 None:intergenic 20.0%
!! ATAATTATTTGACATCTTCA+TGG - chr8_4:7144076-7144095 Msa1310550:CDS 20.0%
!! AATTTCAACAATAAAACTGA+AGG - chr8_4:7144099-7144118 Msa1310550:CDS 20.0%
!! ATTTCAACAATAAAACTGAA+GGG - chr8_4:7144100-7144119 Msa1310550:CDS 20.0%
!! GAATCTCAAATTATCAAATA+TGG - chr8_4:7144179-7144198 Msa1310550:intron 20.0%
!!! TATCTTCAAATGAATTTTCT+GGG - chr8_4:7144337-7144356 Msa1310550:intron 20.0%
!! GTAAATTATGCAAATAATCA+AGG - chr8_4:7144537-7144556 Msa1310550:intron 20.0%
!!! AAAATATTTAAAGGCTTGTT+TGG + chr8_4:7145195-7145214 None:intergenic 20.0%
!! TTAATAAATAGAGAAATGCT+AGG - chr8_4:7145322-7145341 Msa1310550:CDS 20.0%
!! CCAAACATTATCTTATAATT+AGG + chr8_4:7145442-7145461 None:intergenic 20.0%
!! CCTAATTATAAGATAATGTT+TGG - chr8_4:7145439-7145458 Msa1310550:intron 20.0%
!!! ATAATGTTTGGAGAAAATTT+TGG - chr8_4:7145451-7145470 Msa1310550:intron 20.0%
!!! GTTTGCTATTTTTCTTTTTA+AGG + chr8_4:7145530-7145549 None:intergenic 20.0%
!! TTCAGTAATATCAATATCAT+TGG - chr8_4:7145770-7145789 Msa1310550:CDS 20.0%
!!! CATTTAAGTACTTTTGTAAA+CGG - chr8_4:7146235-7146254 Msa1310550:intron 20.0%
!!! TATTATTGGTGATAATAACA+TGG - chr8_4:7146654-7146673 Msa1310550:CDS 20.0%
! ATGAAATGGAAAATGGAAAT+TGG + chr8_4:7143263-7143282 None:intergenic 25.0%
!! TTTAGATGATAATGTGTGAA+AGG + chr8_4:7143310-7143329 None:intergenic 25.0%
! AAATACTTAAATTCCCATCT+GGG + chr8_4:7143464-7143483 None:intergenic 25.0%
! AAAATACTTAAATTCCCATC+TGG + chr8_4:7143465-7143484 None:intergenic 25.0%
!!! ACTTTAGAACAAAACTAACA+CGG + chr8_4:7143721-7143740 None:intergenic 25.0%
!!! TTGTTGACTTACTTTGTTTT+TGG - chr8_4:7143754-7143773 Msa1310550:intron 25.0%
!!! TTGTTGTTACTGATTAGTTT+TGG - chr8_4:7143985-7144004 Msa1310550:intron 25.0%
!!! ATTAGTTTTGGTATAACCTA+TGG - chr8_4:7143997-7144016 Msa1310550:intron 25.0%
!!! TTAGTTTTGGTATAACCTAT+GGG - chr8_4:7143998-7144017 Msa1310550:intron 25.0%
! GGGTTTATATGTAGATTTAA+TGG - chr8_4:7144120-7144139 Msa1310550:CDS 25.0%
!! CTATCTTCAAATGAATTTTC+TGG - chr8_4:7144336-7144355 Msa1310550:intron 25.0%
!! ATCTTCAAATGAATTTTCTG+GGG - chr8_4:7144338-7144357 Msa1310550:intron 25.0%
! TAAAGGAACTAAAGGAATTA+AGG - chr8_4:7144761-7144780 Msa1310550:intron 25.0%
! ATTAAGTAGTTATCCAAACA+AGG + chr8_4:7144902-7144921 None:intergenic 25.0%
! TAATGTAAGCAACAATGAAA+AGG + chr8_4:7145357-7145376 None:intergenic 25.0%
!! TATATGATTTTGCATACTGT+TGG - chr8_4:7145628-7145647 Msa1310550:CDS 25.0%
! ATTGATATTACTGAAGTTGT+TGG + chr8_4:7145765-7145784 None:intergenic 25.0%
! AATATCAATATCATTGGTAC+AGG - chr8_4:7145776-7145795 Msa1310550:CDS 25.0%
!! AGATTTCCTTTAAAAGTTTC+CGG + chr8_4:7146400-7146419 None:intergenic 25.0%
!! TGAGCTTTTCCAATTTTTAA+AGG - chr8_4:7146504-7146523 Msa1310550:intron 25.0%
! AAACTGATATACTTCAAACA+TGG + chr8_4:7146572-7146591 None:intergenic 25.0%
!!! TATCAGTTTTTAAGAGCTAT+TGG - chr8_4:7146583-7146602 Msa1310550:CDS 25.0%
! TTATCACCAATAATATCTTC+AGG + chr8_4:7146649-7146668 None:intergenic 25.0%
AGGCAAAAAATTCCAAAGAA+GGG + chr8_4:7143222-7143241 None:intergenic 30.0%
AAGGCAAAAAATTCCAAAGA+AGG + chr8_4:7143223-7143242 None:intergenic 30.0%
ATGGAAAATGGAAATTGGAA+CGG + chr8_4:7143258-7143277 None:intergenic 30.0%
TTATCATCTAAATCTCTCAC+AGG - chr8_4:7143318-7143337 Msa1310550:CDS 30.0%
!! TGTGTGTTTGTCTTACTTTT+TGG - chr8_4:7143405-7143424 Msa1310550:CDS 30.0%
TTCAGGAATGTAAGTTTCAT+TGG - chr8_4:7143571-7143590 Msa1310550:intron 30.0%
TCAGGAATGTAAGTTTCATT+GGG - chr8_4:7143572-7143591 Msa1310550:intron 30.0%
!!! TGACTTACTTTGTTTTTGGA+TGG - chr8_4:7143758-7143777 Msa1310550:intron 30.0%
GAATTGGATACTAATAAACG+AGG - chr8_4:7143865-7143884 Msa1310550:intron 30.0%
! GGTTTCTTGATTTTTGCTTT+TGG - chr8_4:7143886-7143905 Msa1310550:intron 30.0%
!!! TGATTCTTGTTTTAAGTAGC+TGG - chr8_4:7143935-7143954 Msa1310550:intron 30.0%
! GATTTAATGGTGTTGAATGT+TGG - chr8_4:7144133-7144152 Msa1310550:CDS 30.0%
TTCAAGACTTTATTCTCATC+AGG + chr8_4:7144162-7144181 None:intergenic 30.0%
ATTATCAAATATGGGACTCA+AGG - chr8_4:7144188-7144207 Msa1310550:intron 30.0%
TTATCAAATATGGGACTCAA+GGG - chr8_4:7144189-7144208 Msa1310550:intron 30.0%
ATTAATTGTTCTAGCATGAC+AGG - chr8_4:7144231-7144250 Msa1310550:intron 30.0%
TAATAGTAGAGGAATTTGAC+CGG + chr8_4:7144430-7144449 None:intergenic 30.0%
!! GTTTTATTAGCAGTGAAGTT+TGG + chr8_4:7144513-7144532 None:intergenic 30.0%
AGAAGTCTTAAAGGAACTAA+AGG - chr8_4:7144753-7144772 Msa1310550:intron 30.0%
!!! TACTTGTTTTAAGCCTTGTT+TGG - chr8_4:7144886-7144905 Msa1310550:intron 30.0%
TTGTTTATGGAAACAGCTTA+TGG + chr8_4:7145092-7145111 None:intergenic 30.0%
AATCACTAGTGAAACTGTTT+GGG + chr8_4:7145142-7145161 None:intergenic 30.0%
TAATCACTAGTGAAACTGTT+TGG + chr8_4:7145143-7145162 None:intergenic 30.0%
! CTCAGTAGAATCTAGTTTAT+TGG - chr8_4:7145276-7145295 Msa1310550:CDS 30.0%
!! ATGAAAATATTGATTCCCTC+TGG - chr8_4:7145415-7145434 Msa1310550:CDS 30.0%
ATCTTATAATTAGGACCAGA+GGG + chr8_4:7145433-7145452 None:intergenic 30.0%
TATCTTATAATTAGGACCAG+AGG + chr8_4:7145434-7145453 None:intergenic 30.0%
ATTTATGGTGAAAAGATTGC+AGG - chr8_4:7145844-7145863 Msa1310550:CDS 30.0%
! AGGCCAAAATCAGATATTTT+GGG + chr8_4:7146187-7146206 None:intergenic 30.0%
! AAGGCCAAAATCAGATATTT+TGG + chr8_4:7146188-7146207 None:intergenic 30.0%
! ACTTTTGTAAACGGTGAATT+TGG - chr8_4:7146244-7146263 Msa1310550:intron 30.0%
TTAAAGGAAATCTCGTAGAA+TGG - chr8_4:7146407-7146426 Msa1310550:intron 30.0%
! TGCATGCAACCTTTAAAAAT+TGG + chr8_4:7146516-7146535 None:intergenic 30.0%
TGATATACTTCAAACATGGT+TGG + chr8_4:7146568-7146587 None:intergenic 30.0%
CCAATATTTCATCTTCAGTT+TGG + chr8_4:7146624-7146643 None:intergenic 30.0%
CCAAACTGAAGATGAAATAT+TGG - chr8_4:7146621-7146640 Msa1310550:CDS 30.0%
TTGGTACCTGAAGATATTAT+TGG - chr8_4:7146640-7146659 Msa1310550:CDS 30.0%
! TATTGGTGATAATAACATGG+TGG - chr8_4:7146657-7146676 Msa1310550:CDS 30.0%
!! GAGAAGACTTTTGAAAGTGA+TGG + chr8_4:7143183-7143202 None:intergenic 35.0%
TGGAAAATGGAAATTGGAAC+GGG + chr8_4:7143257-7143276 None:intergenic 35.0%
TGAGTTGTTTAATACCCAGA+TGG - chr8_4:7143447-7143466 Msa1310550:CDS 35.0%
GAGTTGTTTAATACCCAGAT+GGG - chr8_4:7143448-7143467 Msa1310550:CDS 35.0%
!!! TGATGGGTTTCTCATGTTTT+TGG - chr8_4:7143537-7143556 Msa1310550:CDS 35.0%
!!! GTTTCTCATGTTTTTGGTAG+AGG - chr8_4:7143543-7143562 Msa1310550:CDS 35.0%
! TTTTGGTAGAGGTAAGTTTC+AGG - chr8_4:7143554-7143573 Msa1310550:CDS 35.0%
CAGTACTAAAATTCCCATCT+GGG + chr8_4:7143608-7143627 None:intergenic 35.0%
ACAGTACTAAAATTCCCATC+TGG + chr8_4:7143609-7143628 None:intergenic 35.0%
!!! TTGTTTTTGGATGGTTGACT+TGG - chr8_4:7143767-7143786 Msa1310550:intron 35.0%
!!! TTATTTTTCAGGGTGTGATG+TGG - chr8_4:7143831-7143850 Msa1310550:intron 35.0%
!!! TTGCTTTTGGCTTTGTGTTT+AGG - chr8_4:7143899-7143918 Msa1310550:intron 35.0%
!!! TGGCTTTGTGTTTAGGATTT+TGG - chr8_4:7143906-7143925 Msa1310550:intron 35.0%
GAACAATTAATAATGCCACG+AGG + chr8_4:7144222-7144241 None:intergenic 35.0%
CATGACAGGATTAGATCTTT+CGG - chr8_4:7144245-7144264 Msa1310550:intron 35.0%
GTACAATTTGCAAGACTAAC+AGG + chr8_4:7144369-7144388 None:intergenic 35.0%
! TCGGTTCTGACTAAGTTTAA+GGG + chr8_4:7144403-7144422 None:intergenic 35.0%
GGTCAAATTCCTCTACTATT+AGG - chr8_4:7144429-7144448 Msa1310550:intron 35.0%
! GTATCCAACAATCTTTTGAC+CGG - chr8_4:7144480-7144499 Msa1310550:intron 35.0%
! TATCCAACAATCTTTTGACC+GGG - chr8_4:7144481-7144500 Msa1310550:intron 35.0%
CTTTGTGGTACATCTTCATT+GGG - chr8_4:7144561-7144580 Msa1310550:intron 35.0%
TTTGTGGTACATCTTCATTG+GGG - chr8_4:7144562-7144581 Msa1310550:intron 35.0%
AAGATCCTGAAGGAAACAAA+TGG - chr8_4:7144727-7144746 Msa1310550:intron 35.0%
AGATCCTGAAGGAAACAAAT+GGG - chr8_4:7144728-7144747 Msa1310550:intron 35.0%
AAATGGGCAAGAAGTCTTAA+AGG - chr8_4:7144744-7144763 Msa1310550:intron 35.0%
TATTGATGCATCATTGCACA+TGG - chr8_4:7144793-7144812 Msa1310550:intron 35.0%
ATCATTGCACATGGCATATA+TGG - chr8_4:7144802-7144821 Msa1310550:intron 35.0%
TAGCTTATGAAAACAGCTCA+AGG + chr8_4:7145022-7145041 None:intergenic 35.0%
!!! AGCTATTTTTGAAGAGCTTG+TGG - chr8_4:7145037-7145056 Msa1310550:intron 35.0%
ACTGTACTGAAATGAACATC+AGG - chr8_4:7145682-7145701 Msa1310550:CDS 35.0%
CTCAGACATAAACTCTTTCT+CGG + chr8_4:7145882-7145901 None:intergenic 35.0%
GAAAGAGTTTATGTCTGAGA+TGG - chr8_4:7145883-7145902 Msa1310550:CDS 35.0%
!!! TCCACTTTTAGGTTTTTGTG+TGG - chr8_4:7145940-7145959 Msa1310550:CDS 35.0%
! GTCTTTAAAAACATGCCGAA+TGG - chr8_4:7145983-7146002 Msa1310550:CDS 35.0%
TGCACTTAGAGCTTATGTTT+CGG + chr8_4:7146141-7146160 None:intergenic 35.0%
! GAGCCCAAAATATCTGATTT+TGG - chr8_4:7146181-7146200 Msa1310550:intron 35.0%
TACTTAAATGTGTATCGAGC+GGG + chr8_4:7146225-7146244 None:intergenic 35.0%
GTACTTAAATGTGTATCGAG+CGG + chr8_4:7146226-7146245 None:intergenic 35.0%
TCCTGAGTACACAAAAACTT+TGG - chr8_4:7146285-7146304 Msa1310550:intron 35.0%
! ACCAAAGTTTTTGTGTACTC+AGG + chr8_4:7146289-7146308 None:intergenic 35.0%
!!! AAAGCACCGGAAACTTTTAA+AGG - chr8_4:7146391-7146410 Msa1310550:intron 35.0%
!! CAGTTTTTAAGAGCTATTGG+TGG - chr8_4:7146586-7146605 Msa1310550:CDS 35.0%
GAACTTATTGTTGCTAGAGA+AGG - chr8_4:7146679-7146698 Msa1310550:CDS 35.0%
AAATTGGAACGGGTCAAAGA+AGG + chr8_4:7143247-7143266 None:intergenic 40.0%
GATATCAGTTTCAGTCCCAT+AGG + chr8_4:7144016-7144035 None:intergenic 40.0%
CTTTCGGTCAATGATCTATC+TGG - chr8_4:7144261-7144280 Msa1310550:intron 40.0%
! GTCGGTTCTGACTAAGTTTA+AGG + chr8_4:7144404-7144423 None:intergenic 40.0%
! TTAGCAGTGAAGTTTGGAAC+TGG + chr8_4:7144507-7144526 None:intergenic 40.0%
GCAAATAATCAAGGCCTTTG+TGG - chr8_4:7144546-7144565 Msa1310550:intron 40.0%
CCAATGAAGATGTACCACAA+AGG + chr8_4:7144563-7144582 None:intergenic 40.0%
CCTTTGTGGTACATCTTCAT+TGG - chr8_4:7144560-7144579 Msa1310550:intron 40.0%
AAGAAGGAAGAAGATCCTGA+AGG - chr8_4:7144717-7144736 Msa1310550:intron 40.0%
CATAAGTGAACAGCTTCTCT+AGG + chr8_4:7144833-7144852 None:intergenic 40.0%
! AAGCCTTATCCCACTAAGTT+GGG - chr8_4:7145249-7145268 Msa1310550:CDS 40.0%
ATCATTGGTACAGGAAGAAC+AGG - chr8_4:7145785-7145804 Msa1310550:CDS 40.0%
! AAACTCTTTCTCGGAGTGTT+GGG + chr8_4:7145873-7145892 None:intergenic 40.0%
TAAACTCTTTCTCGGAGTGT+TGG + chr8_4:7145874-7145893 None:intergenic 40.0%
GACTGTCAAACATCGTAATC+TGG - chr8_4:7145916-7145935 Msa1310550:CDS 40.0%
!! CGTAATCTGGTTCCACTTTT+AGG - chr8_4:7145929-7145948 Msa1310550:CDS 40.0%
GCCACACAAAAACCTAAAAG+TGG + chr8_4:7145944-7145963 None:intergenic 40.0%
! AGGTTTTTGTGTGGCCAAAA+AGG - chr8_4:7145949-7145968 Msa1310550:CDS 40.0%
! TGATCATGGAGCATTCCATT+CGG + chr8_4:7146001-7146020 None:intergenic 40.0%
!! ATTGCGATTTTGAGTCTCGA+AGG + chr8_4:7146061-7146080 None:intergenic 40.0%
TCGAGACTCAAAATCGCAAT+TGG - chr8_4:7146061-7146080 Msa1310550:intron 40.0%
ATGAAGCCATGCAAATCCTT+TGG + chr8_4:7146092-7146111 None:intergenic 40.0%
ACTTAGAGCTTATGTTTCGG+TGG + chr8_4:7146138-7146157 None:intergenic 40.0%
!! AAGCTCTAAGTGCATCTTGT+TGG - chr8_4:7146147-7146166 Msa1310550:intron 40.0%
! AACGGTGAATTTGGCGATTT+TGG - chr8_4:7146253-7146272 Msa1310550:intron 40.0%
AAGCTAAAAACATCGCCCTT+TGG + chr8_4:7146319-7146338 None:intergenic 40.0%
!!! AAGGGCGATGTTTTTAGCTT+CGG - chr8_4:7146319-7146338 Msa1310550:intron 40.0%
CTGTGTTACAGAAGTTCCAA+AGG - chr8_4:7146537-7146556 Msa1310550:CDS 40.0%
TTACAGAAGTTCCAAAGGAG+AGG - chr8_4:7146542-7146561 Msa1310550:CDS 40.0%
TCCAAGTCTTCTCCCTTCTT+TGG - chr8_4:7143207-7143226 Msa1310550:CDS 45.0%
TCCAAAGAAGGGAGAAGACT+TGG + chr8_4:7143211-7143230 None:intergenic 45.0%
TGGGTTGTTCAAAACCCAGA+TGG - chr8_4:7143591-7143610 Msa1310550:intron 45.0%
GGGTTGTTCAAAACCCAGAT+GGG - chr8_4:7143592-7143611 Msa1310550:intron 45.0%
! GATCTATCTGGAACCATTCC+AGG - chr8_4:7144273-7144292 Msa1310550:intron 45.0%
CGTCGATATATCTCCTGGAA+TGG + chr8_4:7144289-7144308 None:intergenic 45.0%
!! AGAAGCGTCGATATATCTCC+TGG + chr8_4:7144294-7144313 None:intergenic 45.0%
!! TCGAGAGTGCCTAATAGTAG+AGG + chr8_4:7144441-7144460 None:intergenic 45.0%
ATCTTCATTGGGGCTTTGCA+AGG - chr8_4:7144572-7144591 Msa1310550:intron 45.0%
TCTTCATTGGGGCTTTGCAA+GGG - chr8_4:7144573-7144592 Msa1310550:intron 45.0%
!! TATGACTGCGGTGTTACTCT+TGG + chr8_4:7144610-7144629 None:intergenic 45.0%
ACTCTTGCAGCGTTAGGATT+GGG - chr8_4:7144654-7144673 Msa1310550:intron 45.0%
TCGCAGTGCTTATAGGAAGA+AGG - chr8_4:7144701-7144720 Msa1310550:intron 45.0%
CTTGCCCATTTGTTTCCTTC+AGG + chr8_4:7144735-7144754 None:intergenic 45.0%
CAACTTAGTGGGATAAGGCT+TGG + chr8_4:7145250-7145269 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+TGG - chr8_4:7145248-7145267 Msa1310550:CDS 45.0%
CAACCCAACTTAGTGGGATA+AGG + chr8_4:7145255-7145274 None:intergenic 45.0%
! CTTATCCCACTAAGTTGGGT+TGG - chr8_4:7145253-7145272 Msa1310550:CDS 45.0%
GAGATTGAGCGATCTCATGA+AGG - chr8_4:7145736-7145755 Msa1310550:intron 45.0%
TACAAAGCCACCCTTGATGA+TGG - chr8_4:7145815-7145834 Msa1310550:CDS 45.0%
AAATGCCGTGCCATCATCAA+GGG + chr8_4:7145828-7145847 None:intergenic 45.0%
TAAATGCCGTGCCATCATCA+AGG + chr8_4:7145829-7145848 None:intergenic 45.0%
!! TGATGATGGCACGGCATTTA+TGG - chr8_4:7145829-7145848 Msa1310550:CDS 45.0%
! ATGTCTGAGATGGCAACACT+AGG - chr8_4:7145893-7145912 Msa1310550:CDS 45.0%
! TGTCTGAGATGGCAACACTA+GGG - chr8_4:7145894-7145913 Msa1310550:CDS 45.0%
TTTGTGTGGCCAAAAAGGAG+AGG - chr8_4:7145954-7145973 Msa1310550:CDS 45.0%
! GACCAAAAGCCTCTCCTTTT+TGG + chr8_4:7145966-7145985 None:intergenic 45.0%
CAGCAGGATGTAGTTGATCA+TGG + chr8_4:7146015-7146034 None:intergenic 45.0%
TGATCAACTACATCCTGCTG+CGG - chr8_4:7146015-7146034 Msa1310550:intron 45.0%
!!! TATCTGATTTTGGCCTTGCC+AGG - chr8_4:7146191-7146210 Msa1310550:intron 45.0%
AACTTTGGTTGCTACGCCAA+AGG - chr8_4:7146300-7146319 Msa1310550:intron 45.0%
ACTTTGGTTGCTACGCCAAA+GGG - chr8_4:7146301-7146320 Msa1310550:intron 45.0%
!!! AGGGCGATGTTTTTAGCTTC+GGG - chr8_4:7146320-7146339 Msa1310550:intron 45.0%
CACATTTGCAGGTCTTTCAC+CGG + chr8_4:7146368-7146387 None:intergenic 45.0%
TGCAAATGTGGCTAAAGCAC+CGG - chr8_4:7146378-7146397 Msa1310550:intron 45.0%
GACGAGTCACTTCTCAACAA+AGG - chr8_4:7146472-7146491 Msa1310550:intron 45.0%
GGAACGGGTCAAAGAAGGAA+AGG + chr8_4:7143242-7143261 None:intergenic 50.0%
! TGTGGCTGTGCGGATTGAAT+TGG - chr8_4:7143849-7143868 Msa1310550:intron 50.0%
! CTTAGTCAGAACCGACTCAC+CGG - chr8_4:7144408-7144427 Msa1310550:intron 50.0%
GAGGAATTTGACCGGTGAGT+CGG + chr8_4:7144422-7144441 None:intergenic 50.0%
TGGCCCGGTCAAAAGATTGT+TGG + chr8_4:7144487-7144506 None:intergenic 50.0%
! AGTGAAGTTTGGAACTGGCC+CGG + chr8_4:7144502-7144521 None:intergenic 50.0%
AGTAACACCGCAGTCATAGC+TGG - chr8_4:7144612-7144631 Msa1310550:intron 50.0%
GACTCTTGCAGCGTTAGGAT+TGG - chr8_4:7144653-7144672 Msa1310550:intron 50.0%
TTGTGCGTCGCAGTGCTTAT+AGG - chr8_4:7144694-7144713 Msa1310550:intron 50.0%
CTGAGCCAACCCAACTTAGT+GGG + chr8_4:7145261-7145280 None:intergenic 50.0%
ACTGAGCCAACCCAACTTAG+TGG + chr8_4:7145262-7145281 None:intergenic 50.0%
! GGCCAAAAAGGAGAGGCTTT+TGG - chr8_4:7145961-7145980 Msa1310550:CDS 50.0%
GATCAACTACATCCTGCTGC+GGG - chr8_4:7146016-7146035 Msa1310550:intron 50.0%
ATCGCAATTGGAGCAGCCAA+AGG - chr8_4:7146073-7146092 Msa1310550:intron 50.0%
GAGCAGCCAAAGGATTTGCA+TGG - chr8_4:7146083-7146102 Msa1310550:intron 50.0%
ATGTTTCGGTGGATGATGCG+AGG + chr8_4:7146127-7146146 None:intergenic 50.0%
CGGTGAAAGACCTGCAAATG+TGG - chr8_4:7146366-7146385 Msa1310550:intron 50.0%
GGTGCTTTAGCCACATTTGC+AGG + chr8_4:7146379-7146398 None:intergenic 50.0%
GTTGAGAAGTGACTCGTCGA+TGG + chr8_4:7146470-7146489 None:intergenic 50.0%
!! AACATGGTTGGCCTCTCCTT+TGG + chr8_4:7146556-7146575 None:intergenic 50.0%
CTCAAGGGTCAGTTTCCTCG+TGG - chr8_4:7144204-7144223 Msa1310550:intron 55.0%
ATTGGGGCTTTGCAAGGGCA+CGG - chr8_4:7144578-7144597 Msa1310550:intron 55.0%
AGCAGCTCCAGCTATGACTG+CGG + chr8_4:7144622-7144641 None:intergenic 55.0%
GTCATAGCTGGAGCTGCTGT+TGG - chr8_4:7144624-7144643 Msa1310550:intron 55.0%
GCAGTGACTCTTGCAGCGTT+AGG - chr8_4:7144648-7144667 Msa1310550:intron 55.0%
!! AGCCACCCTTGATGATGGCA+CGG - chr8_4:7145820-7145839 Msa1310550:CDS 55.0%
GGTCACCAACTCGAGAAGCA+CGG + chr8_4:7146347-7146366 None:intergenic 55.0%
!! GTGCTTCTCGAGTTGGTGAC+CGG - chr8_4:7146346-7146365 Msa1310550:intron 55.0%
CAGGGTGTGATGTGGCTGTG+CGG - chr8_4:7143839-7143858 Msa1310550:intron 60.0%
TGCCGTGCCATCATCAAGGG+TGG + chr8_4:7145825-7145844 None:intergenic 60.0%
CGGGTGAGTGCACACTTGAC+TGG - chr8_4:7146035-7146054 Msa1310550:intron 60.0%
! ATCGAGCGGGTTCATCAGCC+TGG + chr8_4:7146212-7146231 None:intergenic 60.0%
GTGACTCGTCGATGGCATCG+TGG + chr8_4:7146462-7146481 None:intergenic 60.0%
AGTGTGCACTCACCCGCAGC+AGG + chr8_4:7146031-7146050 None:intergenic 65.0%
GCGGGTTCATCAGCCTGGCA+AGG + chr8_4:7146207-7146226 None:intergenic 65.0%
CGGGACCGTGCTTCTCGAGT+TGG - chr8_4:7146339-7146358 Msa1310550:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 7143162 7146708 7143162 ID=Msa1310550;Name=Msa1310550
chr8_4 mRNA 7143162 7146708 7143162 ID=Msa1310550-mRNA-1;Parent=Msa1310550;Name=Msa1310550-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.28|0|1|0.42|0.5|8|0|509
chr8_4 exon 7146531 7146708 7146531 ID=Msa1310550-mRNA-1:exon:2508;Parent=Msa1310550-mRNA-1
chr8_4 exon 7145881 7146028 7145881 ID=Msa1310550-mRNA-1:exon:2507;Parent=Msa1310550-mRNA-1
chr8_4 exon 7145749 7145868 7145749 ID=Msa1310550-mRNA-1:exon:2506;Parent=Msa1310550-mRNA-1
chr8_4 exon 7145502 7145736 7145502 ID=Msa1310550-mRNA-1:exon:2505;Parent=Msa1310550-mRNA-1
chr8_4 exon 7145206 7145453 7145206 ID=Msa1310550-mRNA-1:exon:2504;Parent=Msa1310550-mRNA-1
chr8_4 exon 7145088 7145163 7145088 ID=Msa1310550-mRNA-1:exon:2503;Parent=Msa1310550-mRNA-1
chr8_4 exon 7144059 7144166 7144059 ID=Msa1310550-mRNA-1:exon:2502;Parent=Msa1310550-mRNA-1
chr8_4 exon 7143162 7143578 7143162 ID=Msa1310550-mRNA-1:exon:2501;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7146531 7146708 7146531 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7145881 7146028 7145881 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7145749 7145868 7145749 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7145502 7145736 7145502 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7145206 7145453 7145206 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7145088 7145163 7145088 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7144059 7144166 7144059 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
chr8_4 CDS 7143162 7143578 7143162 ID=Msa1310550-mRNA-1:cds;Parent=Msa1310550-mRNA-1
Gene Sequence

>Msa1310550

TCATCAAATGAAGAAGCACCATCACTTTCAAAAGTCTTCTCTTATTCCAAGTCTTCTCCCTTCTTTGGAATTTTTTGCCTTTCCTTCTTTGACCCGTTCCAATTTCCATTTTCCATTTCATTTTTTCTTTCTTCTTCACATCAAACCTTTCACACATTATCATCTAAATCTCTCACAGGGTGTGATGTGGCTGTGCGGATTGAATTGGATACTAATAAACGAGGTTTCTTGATTTTTGCTTTTGGCTTTGTGTTTAGGATTTTGGTGAAGATGATTCTTGTTTTAAGTAGCTGGATTTTGAGTTCTTATGTTTTTGTTAGTTTGTTTTTTGGTATAACCTATGGGACTGAAACTGATATCTTCTGTTTGAAAAGTATAAAAAATTCGATTCAAGACCCGAATAATTATTTGACATCTTCATGGAATTTCAACAATAAAACTGAAGGATTTAATGGTGTTGAATGTTGGCATCCTGATGAGAATAAAGTCTTGAATCTCAAATTATCAAATATGGGACTCAAGGGTCAGTTTCCTCGTGGCATTATTAATTGTTCTAGCATGACAGGATTAGATCTTTCGGTCAATGATCTATCTGGAACCATTCCAGGAGATATATCGACGCTTCTAAAATATGTGACGTCTCTTGATCTATCTTCAAATGAATTTTCTGGGGAGATACCTAACCGACTCACCGGTCAAATTCCTCTACTATTAGGCACTCTCGATCGTATTAAGACATTCGATGTATCCAACAATCTTTTGACCGGGCCAGTTCCAAACTTCACTGCTAATAAAACTGAAGTAAATTATGCAAATAATCAAGGCCTTTGTGGTACATCTTCATTGGGGCTTTGCAAGGGCACGGCTTCGTCCAAGAGTAACACCGCAGTCATAGCTGGAGCTGCTGTTGGTGCAGTGACTCTTGCAGCTGCTTATAGGAAGAAGGAAGAAGATCCTGAAGGAAACAAATGGGCAAGAAGTCTTAAAGGAACTAAAGGAATTAAGGTATCTCTATTTGAGAAATCAATTTCAAAAATGAGATTGAGCGATCTCATGAAGGCTACCAACAACTTCAGTAATATCAATATCATTGGTACAGGAAGAACAGGAACATACACAAAAACTTTGGTTGCTACGCCAAAGGGCGATGTTTTTAGCTTCGGGACCGTGCTTCTCGAGTTGGTGACCGGTGAAAGACCTGCAAATGTGGCTAAAGCACCGGAAACTTTTAAAGGAAATCTCGTAGAATGGATTACAGAGCTTTCAAGCAACTCAAAACTCCACGATGCCATCGACGAGTCACTTCTCAACAAAGGTGATGATAATGAGCTTTTCCAATTTTTAAAGGTTGCATGCAACTGTGTTACAGAAGTTCCAAAGGAGAGGCCAACCATGTTTGAAGTATATCAGTTTTTAAGAGCTATTGGTGGTAAGTACAATTTCCAAACTGAAGATGAAATATTGGTACCTGAAGATATTATTGGTGATAATAACATGGTGGAACTTATTGTTGCTAGAGAAGGAAAATAA
Protein sequence

>Msa1310550

SSNEEAPSLSKVFSYSKSSPFFGIFCLSFFDPFQFPFSISFFLSSSHQTFHTLSSKSLTGCDVAVRIELDTNKRGFLIFAFGFVFRILVKMILVLSSWILSSYVFVSLFFGITYGTETDIFCLKSIKNSIQDPNNYLTSSWNFNNKTEGFNGVECWHPDENKVLNLKLSNMGLKGQFPRGIINCSSMTGLDLSVNDLSGTIPGDISTLLKYVTSLDLSSNEFSGEIPNRLTGQIPLLLGTLDRIKTFDVSNNLLTGPVPNFTANKTEVNYANNQGLCGTSSLGLCKGTASSKSNTAVIAGAAVGAVTLAAAYRKKEEDPEGNKWARSLKGTKGIKVSLFEKSISKMRLSDLMKATNNFSNINIIGTGRTGTYTKTLVATPKGDVFSFGTVLLELVTGERPANVAKAPETFKGNLVEWITELSSNSKLHDAIDESLLNKGDDNELFQFLKVACNCVTEVPKERPTMFEVYQFLRAIGGKYNFQTEDEILVPEDIIGDNNMVELIVAREGK*