Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314410 | XP_003627253.2 | 97.447 | 666 | 14 | 1 | 1 | 666 | 1 | 663 | 0.0 | 1338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314410 | G7L6S4 | 97.447 | 666 | 14 | 1 | 1 | 666 | 1 | 663 | 0.0 | 1338 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1314410 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1178710 | Msa1314410 | 0.808231 | 3.427873e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314410 | MtrunA17_Chr8g0343641 | 96.866 | 670 | 14 | 2 | 1 | 666 | 1 | 667 | 0.0 | 1332 |
| Msa1314410 | MtrunA17_Chr1g0181001 | 37.795 | 127 | 75 | 3 | 511 | 634 | 305 | 430 | 1.88e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314410 | AT1G72650.1 | 37.952 | 664 | 344 | 14 | 1 | 636 | 1 | 624 | 8.81e-117 | 363 |
| Msa1314410 | AT1G72650.2 | 38.060 | 670 | 341 | 15 | 1 | 636 | 1 | 630 | 1.98e-115 | 360 |
| Msa1314410 | AT1G17460.1 | 37.363 | 637 | 336 | 19 | 7 | 637 | 5 | 584 | 6.59e-96 | 308 |
| Msa1314410 | AT1G17460.3 | 36.535 | 635 | 323 | 17 | 7 | 637 | 5 | 563 | 3.58e-94 | 303 |
| Msa1314410 | AT1G17460.2 | 36.559 | 651 | 342 | 19 | 7 | 637 | 5 | 604 | 4.78e-93 | 301 |
| Msa1314410 | AT2G37025.2 | 51.064 | 94 | 45 | 1 | 542 | 634 | 288 | 381 | 1.28e-20 | 95.1 |
| Msa1314410 | AT2G37025.3 | 51.064 | 94 | 45 | 1 | 542 | 634 | 288 | 381 | 1.28e-20 | 95.1 |
| Msa1314410 | AT2G37025.1 | 51.064 | 94 | 45 | 1 | 542 | 634 | 288 | 381 | 1.28e-20 | 95.1 |
| Msa1314410 | AT3G53790.1 | 33.600 | 125 | 67 | 4 | 511 | 627 | 272 | 388 | 4.08e-11 | 65.9 |
Find 180 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCATGAACTGTTTA+AGG | 0.108935 | 8_4:+13358255 | Msa1314410:CDS |
| TCTTGCAGTGTTAAGCAATT+TGG | 0.230315 | 8_4:-13361698 | None:intergenic |
| CCCGAGTAACACAAGGAATT+TGG | 0.234511 | 8_4:-13358828 | None:intergenic |
| TTAGACTCTCTTGGAGGTTC+TGG | 0.260346 | 8_4:+13358802 | Msa1314410:CDS |
| TGTAGGTGAGAGTGGCTTAT+TGG | 0.268388 | 8_4:-13353436 | None:intergenic |
| GAAGCTAAATGCAAAGTTTC+AGG | 0.274137 | 8_4:+13357028 | Msa1314410:CDS |
| GGCACTGCAGAGGCAGATTT+GGG | 0.280785 | 8_4:+13357005 | Msa1314410:CDS |
| CTAAAATTGGCTCAGGAATC+GGG | 0.284289 | 8_4:-13361530 | None:intergenic |
| TCTCTCACACGTACTAAAAT+TGG | 0.292996 | 8_4:-13361543 | None:intergenic |
| AGGCACTGCAGAGGCAGATT+TGG | 0.303362 | 8_4:+13357004 | Msa1314410:CDS |
| TGTAACCTCTGCGGAAAATA+TGG | 0.305933 | 8_4:+13358447 | Msa1314410:CDS |
| TCAACTCGTTCTTTCCTCTA+TGG | 0.315490 | 8_4:+13353617 | Msa1314410:five_prime_UTR |
| TCCAAATTCCTTGTGTTACT+CGG | 0.328725 | 8_4:+13358827 | Msa1314410:CDS |
| GAACTGTTTAAGGTAACTTT+TGG | 0.332189 | 8_4:+13358265 | Msa1314410:CDS |
| ACTAAAATTGGCTCAGGAAT+CGG | 0.332607 | 8_4:-13361531 | None:intergenic |
| AAGACTGGAAAATCTTAATA+TGG | 0.340239 | 8_4:+13358552 | Msa1314410:CDS |
| TTAGGCCTCAATTCCTGCCT+TGG | 0.347102 | 8_4:-13360273 | None:intergenic |
| CCCTCTGTGGCATGACTTGA+GGG | 0.348574 | 8_4:-13360306 | None:intergenic |
| TACCCAGGCGTTTCACAATT+AGG | 0.349710 | 8_4:+13356984 | Msa1314410:intron |
| ATGCTATAGAATGTGCTTCC+TGG | 0.350653 | 8_4:-13358063 | None:intergenic |
| ATTACTTCATCATCTGTTGC+AGG | 0.361219 | 8_4:-13356433 | None:intergenic |
| TCAATCGAAAGATCATCTTC+TGG | 0.362969 | 8_4:+13356535 | Msa1314410:CDS |
| TGCAGACACTGGACAGAGTA+TGG | 0.373112 | 8_4:+13356504 | Msa1314410:CDS |
| GTGGTAAATGTTCTTGTCTC+TGG | 0.379761 | 8_4:-13358775 | None:intergenic |
| TATAGTCTTAGTAATCAATC+TGG | 0.381950 | 8_4:+13358097 | Msa1314410:CDS |
| CGAACAAGTTTGTACACAAC+TGG | 0.389839 | 8_4:-13354697 | None:intergenic |
| ACGGGCGAGGCTGCAAAGTT+AGG | 0.392228 | 8_4:+13359356 | Msa1314410:CDS |
| AGCTGTCAACTTGCTTGAAC+TGG | 0.392252 | 8_4:-13361601 | None:intergenic |
| TCTGTCTGAAACTCCATTCC+AGG | 0.407475 | 8_4:+13358045 | Msa1314410:CDS |
| GGAAACAGTTGTTGGAATTG+AGG | 0.407478 | 8_4:+13354594 | Msa1314410:CDS |
| CCTTGTTGAGGTATTGAAAC+TGG | 0.410633 | 8_4:+13360392 | Msa1314410:CDS |
| CAGTTGTGTACAAACTTGTT+CGG | 0.413667 | 8_4:+13354698 | Msa1314410:CDS |
| ACCTTCACAGGCATTGAACT+TGG | 0.414599 | 8_4:-13359443 | None:intergenic |
| TATCACTCCTCCGGAAGGTC+TGG | 0.414828 | 8_4:-13358137 | None:intergenic |
| AATAAAGTCGTTAGCAATCA+TGG | 0.425285 | 8_4:+13359380 | Msa1314410:CDS |
| GACAGATGGAGAAATATGTT+TGG | 0.426126 | 8_4:+13358216 | Msa1314410:CDS |
| TATTCAATGGAAACAGTTGT+TGG | 0.426429 | 8_4:+13354586 | Msa1314410:exon |
| TCAAGCAAGTTGACAGCTAA+TGG | 0.428230 | 8_4:+13361606 | Msa1314410:CDS |
| TCAGTTGTGCCAATCATTAC+CGG | 0.432862 | 8_4:-13360249 | None:intergenic |
| TTGCTTGAACTGGAATTTGA+AGG | 0.433165 | 8_4:-13361591 | None:intergenic |
| ACCACCAGGTTAGACTCTCT+TGG | 0.437848 | 8_4:+13358793 | Msa1314410:CDS |
| GATCAGTGTTCCAGACCTTC+CGG | 0.438443 | 8_4:+13358127 | Msa1314410:CDS |
| TGGTTTAGTGTAGGTGAGAG+TGG | 0.438831 | 8_4:-13353444 | None:intergenic |
| CATCTTATGCCGGGCCTGCT+AGG | 0.439331 | 8_4:+13358743 | Msa1314410:CDS |
| GATGCTGCAAAAGGTTAAAC+AGG | 0.440482 | 8_4:+13357922 | Msa1314410:intron |
| AGAAACTTCGCTTGTCGTCT+CGG | 0.444782 | 8_4:+13357948 | Msa1314410:CDS |
| TTTCAGAAATTCCATCCAAC+TGG | 0.446041 | 8_4:+13359332 | Msa1314410:intron |
| GGAATTGAGGATTATGATGA+TGG | 0.451484 | 8_4:+13354607 | Msa1314410:CDS |
| ATCTTCTGGGAAGCTTCGAT+TGG | 0.453710 | 8_4:+13356549 | Msa1314410:CDS |
| TGCACCGACACCTGCTGATG+AGG | 0.456445 | 8_4:+13360663 | Msa1314410:CDS |
| GCAGCCTCGCCCGTGCCAGT+TGG | 0.456464 | 8_4:-13359347 | None:intergenic |
| CAATCGAAAGATCATCTTCT+GGG | 0.456715 | 8_4:+13356536 | Msa1314410:CDS |
| TAAAAGTACGGGACACATAC+AGG | 0.458554 | 8_4:+13358711 | Msa1314410:CDS |
| ATCAGATGTTTAAAGTATTG+AGG | 0.458812 | 8_4:+13361825 | Msa1314410:three_prime_UTR |
| CGCGGTGTGGACCAGGGAGG+TGG | 0.459826 | 8_4:+13360427 | Msa1314410:CDS |
| ACAAACAGTGGTTGAGGAGG+AGG | 0.470154 | 8_4:+13358308 | Msa1314410:CDS |
| GATTATGATGATGGGAAGCT+TGG | 0.470512 | 8_4:+13354616 | Msa1314410:CDS |
| GTCAAGTTCTAATAAAAGTA+CGG | 0.470595 | 8_4:+13358699 | Msa1314410:CDS |
| GCCCTCTGTGGCATGACTTG+AGG | 0.473621 | 8_4:-13360307 | None:intergenic |
| ATGCAGTATCCGGTAATGAT+TGG | 0.476336 | 8_4:+13360240 | Msa1314410:CDS |
| CCTCGCCCGTGCCAGTTGGA+TGG | 0.484094 | 8_4:-13359343 | None:intergenic |
| GAAAGAGAAGATGCAGTATC+CGG | 0.484129 | 8_4:+13360230 | Msa1314410:CDS |
| AGTTGTGTACAAACTTGTTC+GGG | 0.487495 | 8_4:+13354699 | Msa1314410:CDS |
| CCAAATTCCTTGTGTTACTC+GGG | 0.488276 | 8_4:+13358828 | Msa1314410:CDS |
| GAGGTATTGAAACTGGTTGA+TGG | 0.490269 | 8_4:+13360399 | Msa1314410:CDS |
| TGCATGAGGTTGATATTCAA+TGG | 0.492880 | 8_4:+13354573 | Msa1314410:exon |
| CCATCCAACTGGCACGGGCG+AGG | 0.493525 | 8_4:+13359343 | Msa1314410:CDS |
| GTTAATATTCCTACTGCTAA+GGG | 0.493709 | 8_4:+13360336 | Msa1314410:CDS |
| CTCTTCAATATATCGCTTAG+TGG | 0.496612 | 8_4:-13358638 | None:intergenic |
| ATAGAATGTGCTTCCTGGAA+TGG | 0.499600 | 8_4:-13358058 | None:intergenic |
| GTCTTGTTTCAGTAGCAACT+TGG | 0.503155 | 8_4:-13358534 | None:intergenic |
| GGAAAATATGGCTGTACAAA+GGG | 0.504045 | 8_4:+13358459 | Msa1314410:CDS |
| GCACCGACACCTGCTGATGA+GGG | 0.506194 | 8_4:+13360664 | Msa1314410:CDS |
| AGTTAATATTCCTACTGCTA+AGG | 0.507711 | 8_4:+13360335 | Msa1314410:CDS |
| ACCGTCTGATGAACCTTCAC+AGG | 0.512080 | 8_4:-13359455 | None:intergenic |
| ATTTGTACATGAGAATGAAC+AGG | 0.513633 | 8_4:-13357974 | None:intergenic |
| TGATATGATGTTCAGGTTGA+AGG | 0.515704 | 8_4:+13356394 | Msa1314410:intron |
| AAATTCCATCCAACTGGCAC+GGG | 0.516476 | 8_4:+13359338 | Msa1314410:CDS |
| GCTTCTCCAACATCTTATGC+CGG | 0.518668 | 8_4:+13358733 | Msa1314410:CDS |
| TCTGGATAAGCATTCCTAGC+AGG | 0.519734 | 8_4:-13358757 | None:intergenic |
| CTGATCCAAGGCAGGAATTG+AGG | 0.519818 | 8_4:+13360268 | Msa1314410:CDS |
| TATTGAACAGATGCTGCAAA+AGG | 0.522438 | 8_4:+13357913 | Msa1314410:intron |
| ACGATGTGAGTACGAAGAAA+AGG | 0.527449 | 8_4:-13360469 | None:intergenic |
| AATCTAGAGAGCAAATTCCT+AGG | 0.527590 | 8_4:+13358674 | Msa1314410:CDS |
| TCAAGTTCTAATAAAAGTAC+GGG | 0.529173 | 8_4:+13358700 | Msa1314410:CDS |
| TACGCATCTAAACAAAGGAT+TGG | 0.532830 | 8_4:-13361768 | None:intergenic |
| AAGTTTGTACACAACTGGAT+TGG | 0.533387 | 8_4:-13354692 | None:intergenic |
| GGAGGTGGTCTGAGATCAAA+CGG | 0.534301 | 8_4:+13360442 | Msa1314410:CDS |
| GATGTTCAGGTTGAAGGTGA+TGG | 0.534856 | 8_4:+13356400 | Msa1314410:intron |
| AGAACCTTCTCATTTCTGAC+AGG | 0.535005 | 8_4:-13358025 | None:intergenic |
| ATCAACTTCGCAACCACCCA+CGG | 0.535596 | 8_4:-13358506 | None:intergenic |
| ACATATTTCTCCATCTGTCA+TGG | 0.536255 | 8_4:-13358212 | None:intergenic |
| CTTCGATTGGAGTGCTCGGA+AGG | 0.537545 | 8_4:+13356562 | Msa1314410:CDS |
| CGGAAAATATGGCTGTACAA+AGG | 0.539341 | 8_4:+13358458 | Msa1314410:CDS |
| GGCTTATTGGTTACGCTCTG+TGG | 0.542951 | 8_4:-13353423 | None:intergenic |
| TTGATCTCAGACCACCTCCC+TGG | 0.544021 | 8_4:-13360438 | None:intergenic |
| ACAGCTAATGGTGCAACTAA+TGG | 0.544625 | 8_4:+13361618 | Msa1314410:CDS |
| CTTCTCCAACATCTTATGCC+GGG | 0.545399 | 8_4:+13358734 | Msa1314410:CDS |
| TCTTCAATATATCGCTTAGT+GGG | 0.545730 | 8_4:-13358637 | None:intergenic |
| TGATGAAGTAATGGAGGTCG+AGG | 0.548266 | 8_4:+13356444 | Msa1314410:CDS |
| CAGATGAATTCGCGGAAGCA+TGG | 0.549879 | 8_4:+13361501 | Msa1314410:intron |
| ACCAGGTTAGACTCTCTTGG+AGG | 0.551035 | 8_4:+13358796 | Msa1314410:CDS |
| ACCACTTTCTATCACTCCTC+CGG | 0.551691 | 8_4:-13358146 | None:intergenic |
| AGTTGCTACTGAAACAAGAC+TGG | 0.553513 | 8_4:+13358537 | Msa1314410:CDS |
| ACACGTACTAAAATTGGCTC+AGG | 0.556714 | 8_4:-13361537 | None:intergenic |
| GCTTATGACAGATGAATTCG+CGG | 0.558208 | 8_4:+13361493 | Msa1314410:intron |
| CCCTCAAGTCATGCCACAGA+GGG | 0.560986 | 8_4:+13360306 | Msa1314410:CDS |
| TTATTAGAACTTGACGACCT+AGG | 0.567947 | 8_4:-13358691 | None:intergenic |
| ATAGTCTTAGTAATCAATCT+GGG | 0.568164 | 8_4:+13358098 | Msa1314410:CDS |
| ACTGGATTGGAAATCCGCTT+CGG | 0.568642 | 8_4:-13354679 | None:intergenic |
| ATTTCCTGTCAGAAATGAGA+AGG | 0.570033 | 8_4:+13358021 | Msa1314410:CDS |
| GAAATTCCATCCAACTGGCA+CGG | 0.574444 | 8_4:+13359337 | Msa1314410:intron |
| TTGCTTTGCAGGACAAGTGG+AGG | 0.574686 | 8_4:+13360620 | Msa1314410:intron |
| ATGCGTGTTGTTGCAGACAC+TGG | 0.574854 | 8_4:+13356493 | Msa1314410:CDS |
| GCCAAGTTCAATGCCTGTGA+AGG | 0.575095 | 8_4:+13359442 | Msa1314410:CDS |
| GCAGGCCCGGCATAAGATGT+TGG | 0.575446 | 8_4:-13358739 | None:intergenic |
| GTATAATGATTCAAAAGCCG+TGG | 0.575963 | 8_4:+13358489 | Msa1314410:CDS |
| AGAAATTGAACTAACCATAG+AGG | 0.577239 | 8_4:-13353631 | None:intergenic |
| ATGTTCAGGTTGAAGGTGAT+GGG | 0.579628 | 8_4:+13356401 | Msa1314410:intron |
| ATGTGGGTTTGGTTTAGTGT+AGG | 0.581373 | 8_4:-13353453 | None:intergenic |
| GGAACATGAATTAGAAGATG+AGG | 0.581860 | 8_4:+13358573 | Msa1314410:CDS |
| TGATGCTGATAGTGAAATTG+AGG | 0.581949 | 8_4:+13359406 | Msa1314410:CDS |
| GCCTGTGAAGGTTCATCAGA+CGG | 0.582544 | 8_4:+13359454 | Msa1314410:CDS |
| GAAATTTATCAGCAGAACAC+TGG | 0.582582 | 8_4:-13358003 | None:intergenic |
| GTGTGTCGCGGTGTGGACCA+GGG | 0.582938 | 8_4:+13360421 | Msa1314410:CDS |
| TGGCACAACTGATCCAAGGC+AGG | 0.586281 | 8_4:+13360260 | Msa1314410:CDS |
| ATGGGAAGCTTGGAGACAGT+GGG | 0.587778 | 8_4:+13354626 | Msa1314410:CDS |
| TGCAACAGATGATGAAGTAA+TGG | 0.588284 | 8_4:+13356435 | Msa1314410:CDS |
| ATAAGCATTCCTAGCAGGCC+CGG | 0.588525 | 8_4:-13358752 | None:intergenic |
| GGAGGAAGCATCATCGAGCA+TGG | 0.588802 | 8_4:+13360367 | Msa1314410:CDS |
| TCGTACCTCTGTTGATCTCA+AGG | 0.591435 | 8_4:+13360488 | Msa1314410:CDS |
| TGAAAGACAAACAGTGGTTG+AGG | 0.593919 | 8_4:+13358302 | Msa1314410:CDS |
| TCCGGAGGAGTGATAGAAAG+TGG | 0.595035 | 8_4:+13358145 | Msa1314410:CDS |
| AATGGTGCAAGGAGTATGCA+TGG | 0.595350 | 8_4:+13361636 | Msa1314410:CDS |
| TATAATATAATGTCTTAGAG+TGG | 0.602252 | 8_4:+13361853 | Msa1314410:three_prime_UTR |
| TTGTGTACTTGAGGTGCATG+AGG | 0.602971 | 8_4:+13354559 | Msa1314410:five_prime_UTR |
| GAAGCTTCGATTGGAGTGCT+CGG | 0.603127 | 8_4:+13356558 | Msa1314410:CDS |
| ATGCTTTGTCTTCACCGAAG+CGG | 0.604040 | 8_4:+13354665 | Msa1314410:CDS |
| GAATTGAGGATTATGATGAT+GGG | 0.607731 | 8_4:+13354608 | Msa1314410:CDS |
| CTCATTCCACCCTTAGCAGT+AGG | 0.609420 | 8_4:-13360345 | None:intergenic |
| AGTATGCATGGAGACAGAGT+GGG | 0.611165 | 8_4:+13361648 | Msa1314410:CDS |
| AACTCTACGCATCTAAACAA+AGG | 0.613284 | 8_4:-13361773 | None:intergenic |
| GTTGATGGTGTGTCGCGGTG+TGG | 0.617079 | 8_4:+13360414 | Msa1314410:CDS |
| ACCGACACCTGCTGATGAGG+GGG | 0.617146 | 8_4:+13360666 | Msa1314410:CDS |
| TCGAGCATGGACCCTTGTTG+AGG | 0.624113 | 8_4:+13360380 | Msa1314410:CDS |
| TTCACAATTAGGCACTGCAG+AGG | 0.626200 | 8_4:+13356995 | Msa1314410:CDS |
| CTTTCTATCACTCCTCCGGA+AGG | 0.629182 | 8_4:-13358142 | None:intergenic |
| TTCAGGTTGAAGGTGATGGG+AGG | 0.629250 | 8_4:+13356404 | Msa1314410:intron |
| CCAGTTTCAATACCTCAACA+AGG | 0.630743 | 8_4:-13360392 | None:intergenic |
| CACCGACACCTGCTGATGAG+GGG | 0.630947 | 8_4:+13360665 | Msa1314410:CDS |
| CTGCTAAGGGTGGAATGAGG+AGG | 0.632543 | 8_4:+13360349 | Msa1314410:CDS |
| AGACAAGAACATTTACCACC+AGG | 0.632627 | 8_4:+13358779 | Msa1314410:CDS |
| GAGTATGCATGGAGACAGAG+TGG | 0.634281 | 8_4:+13361647 | Msa1314410:CDS |
| TAAAATTGGCTCAGGAATCG+GGG | 0.636315 | 8_4:-13361529 | None:intergenic |
| TGATTGGCACAACTGATCCA+AGG | 0.638247 | 8_4:+13360256 | Msa1314410:CDS |
| CTTCGCACCCGAGTAACACA+AGG | 0.639559 | 8_4:-13358835 | None:intergenic |
| ACCTCCAAGAGAGTCTAACC+TGG | 0.641656 | 8_4:-13358797 | None:intergenic |
| CTACTGCTAAGGGTGGAATG+AGG | 0.643884 | 8_4:+13360346 | Msa1314410:CDS |
| ATTAACTATATTGCCCTCTG+TGG | 0.645795 | 8_4:-13360319 | None:intergenic |
| ATGGTGCAACTAATGGTGCA+AGG | 0.647506 | 8_4:+13361625 | Msa1314410:CDS |
| GCACTGCAGAGGCAGATTTG+GGG | 0.651789 | 8_4:+13357006 | Msa1314410:CDS |
| TATAATGATTCAAAAGCCGT+GGG | 0.654536 | 8_4:+13358490 | Msa1314410:CDS |
| AAGACAAACAGTGGTTGAGG+AGG | 0.656203 | 8_4:+13358305 | Msa1314410:CDS |
| GGGTGCGAAGAAGTCGTCCA+CGG | 0.656929 | 8_4:+13358848 | Msa1314410:CDS |
| AACTGGTTGATGGTGTGTCG+CGG | 0.661368 | 8_4:+13360409 | Msa1314410:CDS |
| AATATTCCTACTGCTAAGGG+TGG | 0.661873 | 8_4:+13360339 | Msa1314410:CDS |
| CAAAGCGGAATTGACAGCAG+AGG | 0.662074 | 8_4:-13358176 | None:intergenic |
| GATGGGAAGCTTGGAGACAG+TGG | 0.663251 | 8_4:+13354625 | Msa1314410:CDS |
| AACAGATGATGAAGTAATGG+AGG | 0.663256 | 8_4:+13356438 | Msa1314410:CDS |
| AATGATTCAAAAGCCGTGGG+TGG | 0.666719 | 8_4:+13358493 | Msa1314410:CDS |
| CTACTGTGAAAGACAAACAG+TGG | 0.669591 | 8_4:+13358296 | Msa1314410:CDS |
| TCCCTCAAGTCATGCCACAG+AGG | 0.700875 | 8_4:+13360305 | Msa1314410:CDS |
| TCCAAGAGAGTCTAACCTGG+TGG | 0.701922 | 8_4:-13358794 | None:intergenic |
| TGCTGCAGCTGTAACCTCTG+CGG | 0.706466 | 8_4:+13358438 | Msa1314410:CDS |
| GTATGCATGGAGACAGAGTG+GGG | 0.706825 | 8_4:+13361649 | Msa1314410:CDS |
| CAGTGTTCCAGACCTTCCGG+AGG | 0.711228 | 8_4:+13358130 | Msa1314410:CDS |
| TGTCGCGGTGTGGACCAGGG+AGG | 0.718246 | 8_4:+13360424 | Msa1314410:CDS |
| GAGTACCTTGAGATCAACAG+AGG | 0.719395 | 8_4:-13360493 | None:intergenic |
| CAGTTTCAATACCTCAACAA+GGG | 0.719688 | 8_4:-13360391 | None:intergenic |
| AATTGGCTCAGGAATCGGGG+CGG | 0.743933 | 8_4:-13361526 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTATTTTTGTTACT+TGG | + | chr8_4:13353884-13353903 | Msa1314410:intron | 10.0% |
| !!! | ATTTTTTATTTTTGTTACTT+GGG | + | chr8_4:13353885-13353904 | Msa1314410:intron | 10.0% |
| !! | ATTGTATATTGTTAAAATAT+AGG | + | chr8_4:13354281-13354300 | Msa1314410:intron | 10.0% |
| !! | GAACAAAATAAAAAAAATAA+TGG | - | chr8_4:13361040-13361059 | None:intergenic | 10.0% |
| !!! | AATTTCTAATTTTTATCATC+TGG | + | chr8_4:13353647-13353666 | Msa1314410:intron | 15.0% |
| !!! | ATTTCTAATTTTTATCATCT+GGG | + | chr8_4:13353648-13353667 | Msa1314410:intron | 15.0% |
| !!! | TTTTGATTTTTATAAGTTTC+TGG | + | chr8_4:13353844-13353863 | Msa1314410:intron | 15.0% |
| !!! | TTTTTGTATTTGTGTATAAT+TGG | + | chr8_4:13353952-13353971 | Msa1314410:intron | 15.0% |
| !!! | ATTTGTTTTCTTTGTTTTAT+AGG | + | chr8_4:13354536-13354555 | Msa1314410:intron | 15.0% |
| !! | AAAAGGAAAAGAAAAAAAAA+AGG | - | chr8_4:13355324-13355343 | None:intergenic | 15.0% |
| !!! | TATATTTTTACCTTATTAGT+AGG | + | chr8_4:13356035-13356054 | Msa1314410:intron | 15.0% |
| !! | ATTATATTTGAAAGGTAATT+TGG | + | chr8_4:13356268-13356287 | Msa1314410:intron | 15.0% |
| !!! | TTTGAATTTTGTTAAGTTTT+AGG | + | chr8_4:13356898-13356917 | Msa1314410:intron | 15.0% |
| !! | CATTTCATAATTTAATAAAG+AGG | - | chr8_4:13357254-13357273 | None:intergenic | 15.0% |
| !! | GAAAATTTGAATTAAGTTAA+AGG | - | chr8_4:13357345-13357364 | None:intergenic | 15.0% |
| !! | TATTTATATTAAGTATCACA+TGG | + | chr8_4:13357601-13357620 | Msa1314410:intron | 15.0% |
| !! | TTATAATGTCAATTATAACT+TGG | - | chr8_4:13358995-13359014 | None:intergenic | 15.0% |
| !! | ATAAAATAAAAACAATTGAC+AGG | - | chr8_4:13359286-13359305 | None:intergenic | 15.0% |
| !!! | TAACTATTAGAAGTATTAAT+AGG | + | chr8_4:13359967-13359986 | Msa1314410:intron | 15.0% |
| !! | AAATCAAAATGATTATATCA+TGG | - | chr8_4:13360169-13360188 | None:intergenic | 15.0% |
| !!! | ATATAATCATTTTGATTTTG+TGG | + | chr8_4:13360171-13360190 | Msa1314410:intron | 15.0% |
| !!! | TATAATCATTTTGATTTTGT+GGG | + | chr8_4:13360172-13360191 | Msa1314410:intron | 15.0% |
| !! | TATTAGTCACTAAAAATTAT+AGG | - | chr8_4:13361088-13361107 | None:intergenic | 15.0% |
| !!! | ATAATTTTTAGTGACTAATA+TGG | + | chr8_4:13361088-13361107 | Msa1314410:intron | 15.0% |
| !! | AATGATAAAAAAGAGTTAAT+AGG | - | chr8_4:13361155-13361174 | None:intergenic | 15.0% |
| !! | TACGAAAATTGAAAAAATGT+GGG | - | chr8_4:13353472-13353491 | None:intergenic | 20.0% |
| !!! | ATTGAGTTTTTCTTGTTATT+TGG | + | chr8_4:13354062-13354081 | Msa1314410:intron | 20.0% |
| !!! | TTGAGTTTTTCTTGTTATTT+GGG | + | chr8_4:13354063-13354082 | Msa1314410:intron | 20.0% |
| !! | ATAGACTTATTTGATTGTAA+GGG | - | chr8_4:13354142-13354161 | None:intergenic | 20.0% |
| !!! | ATTGATAGTTGTGAAATATA+AGG | + | chr8_4:13354343-13354362 | Msa1314410:intron | 20.0% |
| !! | ATCATTCTAATAAAAATGTG+TGG | - | chr8_4:13355230-13355249 | None:intergenic | 20.0% |
| !!! | AAGAAAAAAAAAAGGTATCA+AGG | - | chr8_4:13355316-13355335 | None:intergenic | 20.0% |
| !! | TTGAATAACTAGACTATAAA+AGG | - | chr8_4:13355399-13355418 | None:intergenic | 20.0% |
| !!! | ATGTTAAGATTGTAGTTTTT+AGG | + | chr8_4:13355523-13355542 | Msa1314410:intron | 20.0% |
| !! | TTATATTTAAGTGAATTGCA+TGG | + | chr8_4:13356141-13356160 | Msa1314410:intron | 20.0% |
| !!! | CCATTTTATTATCGAAAATT+TGG | - | chr8_4:13356204-13356223 | None:intergenic | 20.0% |
| !!! | CCAAATTTTCGATAATAAAA+TGG | + | chr8_4:13356201-13356220 | Msa1314410:intron | 20.0% |
| !! | GAAAAGGAATTATATTTGAA+AGG | + | chr8_4:13356260-13356279 | Msa1314410:intron | 20.0% |
| !! | AACCATGTAACAAAAAATTA+GGG | - | chr8_4:13356312-13356331 | None:intergenic | 20.0% |
| !! | TATTATGTATCTCTGATAAA+AGG | - | chr8_4:13357209-13357228 | None:intergenic | 20.0% |
| !! | TTATCAGAGATACATAATAA+AGG | + | chr8_4:13357210-13357229 | Msa1314410:intron | 20.0% |
| !!! | ATGTTATGTGTAGTTTTATT+TGG | + | chr8_4:13357723-13357742 | Msa1314410:intron | 20.0% |
| !!! | TTGTGAATTTTTCTTTTTCT+TGG | + | chr8_4:13357783-13357802 | Msa1314410:intron | 20.0% |
| !!! | TTTTTCTTTTTCTTGGTTAA+TGG | + | chr8_4:13357790-13357809 | Msa1314410:intron | 20.0% |
| !!! | TTTTCTTTTTCTTGGTTAAT+GGG | + | chr8_4:13357791-13357810 | Msa1314410:intron | 20.0% |
| !!! | TATACTAGAAGAAATTTTAG+AGG | - | chr8_4:13357895-13357914 | None:intergenic | 20.0% |
| !! | TCATATATTTAAGCAAGAAA+AGG | - | chr8_4:13358905-13358924 | None:intergenic | 20.0% |
| !! | ATAAACTCAATTAGAAAGTT+AGG | + | chr8_4:13359052-13359071 | Msa1314410:intron | 20.0% |
| !! | TAAACTCAATTAGAAAGTTA+GGG | + | chr8_4:13359053-13359072 | Msa1314410:intron | 20.0% |
| !!! | TATCATATATCAGTTATTTC+TGG | - | chr8_4:13359261-13359280 | None:intergenic | 20.0% |
| !! | AGAAATTCATTAAGACAAAA+AGG | + | chr8_4:13359578-13359597 | Msa1314410:intron | 20.0% |
| !! | AAGGATGAATATTATTACAA+AGG | + | chr8_4:13359597-13359616 | Msa1314410:intron | 20.0% |
| !! | CAAAAACAAAGTACAATTAT+AGG | + | chr8_4:13359620-13359639 | Msa1314410:intron | 20.0% |
| !! | TAATAGTTATAACACATGAA+AGG | - | chr8_4:13359956-13359975 | None:intergenic | 20.0% |
| !! | AATAGAAAAAAATAAAGGAG+AGG | - | chr8_4:13360131-13360150 | None:intergenic | 20.0% |
| !! | ATTAATAAATTCATGTCATG+TGG | + | chr8_4:13360516-13360535 | Msa1314410:intron | 20.0% |
| !!! | TTTAATTGCAATGATCATTT+TGG | - | chr8_4:13360926-13360945 | None:intergenic | 20.0% |
| !!! | TAAAAAAAATAATGGGAGAT+TGG | - | chr8_4:13361032-13361051 | None:intergenic | 20.0% |
| ! | AAATTGAAAAAATGTGGGTT+TGG | - | chr8_4:13353467-13353486 | None:intergenic | 25.0% |
| ! | CTACGAAAATTGAAAAAATG+TGG | - | chr8_4:13353473-13353492 | None:intergenic | 25.0% |
| !!! | ATCTGGGTTTGTTTTAATTA+TGG | + | chr8_4:13353664-13353683 | Msa1314410:intron | 25.0% |
| ! | AACAACGAAAATGCAATAAA+GGG | - | chr8_4:13353701-13353720 | None:intergenic | 25.0% |
| ! | AAACAACGAAAATGCAATAA+AGG | - | chr8_4:13353702-13353721 | None:intergenic | 25.0% |
| !! | TTTTTGTGTTTGTGGTTAAT+TGG | + | chr8_4:13353781-13353800 | Msa1314410:intron | 25.0% |
| !! | TTTGTGTATAATTGGAGTTT+TGG | + | chr8_4:13353960-13353979 | Msa1314410:intron | 25.0% |
| ! | CATAGACTTATTTGATTGTA+AGG | - | chr8_4:13354143-13354162 | None:intergenic | 25.0% |
| !! | CCTTTTCGAAATATTCATAA+TGG | - | chr8_4:13354166-13354185 | None:intergenic | 25.0% |
| ! | CCATTATGAATATTTCGAAA+AGG | + | chr8_4:13354163-13354182 | Msa1314410:intron | 25.0% |
| ! | TATTAGTCATTCTAACAACA+TGG | + | chr8_4:13354212-13354231 | Msa1314410:intron | 25.0% |
| ! | GATAGTTAGTGGTTAAATAT+AGG | + | chr8_4:13354248-13354267 | Msa1314410:intron | 25.0% |
| !! | ATAGGATCTAATTGATAGTA+AGG | + | chr8_4:13354299-13354318 | Msa1314410:intron | 25.0% |
| !! | TTGATAGTAAGGACTATAAT+TGG | + | chr8_4:13354310-13354329 | Msa1314410:intron | 25.0% |
| ! | CATATGATTATAACACTTCA+TGG | - | chr8_4:13355038-13355057 | None:intergenic | 25.0% |
| !!! | CATATGTTCTTTTTGTTTGT+TGG | + | chr8_4:13355052-13355071 | Msa1314410:intron | 25.0% |
| ! | TTCTTAATTATTAGATTGGG+CGG | - | chr8_4:13355178-13355197 | None:intergenic | 25.0% |
| ! | GGCTTCTTAATTATTAGATT+GGG | - | chr8_4:13355181-13355200 | None:intergenic | 25.0% |
| ! | TTCTAATAAAAATGTGTGGA+TGG | - | chr8_4:13355226-13355245 | None:intergenic | 25.0% |
| ! | TGAATGCAATCATAAATAAC+CGG | - | chr8_4:13355288-13355307 | None:intergenic | 25.0% |
| ! | ATCTACTACAAAATATCTGA+TGG | + | chr8_4:13355363-13355382 | Msa1314410:intron | 25.0% |
| !!! | AAGATTGTAGTTTTTAGGAT+CGG | + | chr8_4:13355528-13355547 | Msa1314410:intron | 25.0% |
| ! | CCGTCAACATTAAAAAATTA+CGG | - | chr8_4:13355628-13355647 | None:intergenic | 25.0% |
| !!! | CCGTAATTTTTTAATGTTGA+CGG | + | chr8_4:13355625-13355644 | Msa1314410:intron | 25.0% |
| !!! | CGTAATTTTTTAATGTTGAC+GGG | + | chr8_4:13355626-13355645 | Msa1314410:intron | 25.0% |
| ! | CATATATGGTTTCTAACTTA+TGG | + | chr8_4:13355925-13355944 | Msa1314410:intron | 25.0% |
| ! | AGTTTAATGTTGTGATTTAG+AGG | + | chr8_4:13355958-13355977 | Msa1314410:intron | 25.0% |
| ! | ATCATAAGATCCTACTAATA+AGG | - | chr8_4:13356048-13356067 | None:intergenic | 25.0% |
| ! | ATAATGCAACCAAATTACAA+AGG | - | chr8_4:13356171-13356190 | None:intergenic | 25.0% |
| ! | GGAATGTTGAAATTTGAAAA+TGG | + | chr8_4:13356222-13356241 | Msa1314410:intron | 25.0% |
| ! | TGAAAATGGAATTTATTGTG+TGG | + | chr8_4:13356236-13356255 | Msa1314410:intron | 25.0% |
| !!! | TTCCCTAATTTTTTGTTACA+TGG | + | chr8_4:13356307-13356326 | Msa1314410:intron | 25.0% |
| ! | GAACCATGTAACAAAAAATT+AGG | - | chr8_4:13356313-13356332 | None:intergenic | 25.0% |
| !! | CTAGATAAAAGTACAAATCA+CGG | - | chr8_4:13356348-13356367 | None:intergenic | 25.0% |
| !!! | GTGATTTGTACTTTTATCTA+GGG | + | chr8_4:13356347-13356366 | Msa1314410:intron | 25.0% |
| ! | GTCATAAAACAACTAAAAGA+AGG | - | chr8_4:13356741-13356760 | None:intergenic | 25.0% |
| ! | GAGAAATAAGTTAGCTAATA+TGG | - | chr8_4:13356930-13356949 | None:intergenic | 25.0% |
| ! | TAATGACACAAAAGAGATAA+AGG | - | chr8_4:13357376-13357395 | None:intergenic | 25.0% |
| ! | AGTTTGTCAAAAATGAAGTT+TGG | - | chr8_4:13357433-13357452 | None:intergenic | 25.0% |
| !! | CTATGTCAAATATTTGTTAC+TGG | + | chr8_4:13357523-13357542 | Msa1314410:intron | 25.0% |
| ! | TTGTTACTGGATATAATACA+TGG | + | chr8_4:13357536-13357555 | Msa1314410:intron | 25.0% |
| !! | TTTTTATGAGTCTCTTAGAT+TGG | + | chr8_4:13357682-13357701 | Msa1314410:intron | 25.0% |
| ! | AACTACACATAACATTGTAA+AGG | - | chr8_4:13357718-13357737 | None:intergenic | 25.0% |
| !!! | TTGGTAGTATTTTGTTTTCT+AGG | + | chr8_4:13357858-13357877 | Msa1314410:intron | 25.0% |
| !!! | TGGTAGTATTTTGTTTTCTA+GGG | + | chr8_4:13357859-13357878 | Msa1314410:intron | 25.0% |
| !!! | AGAAATTTTAGAGGTAAAGA+AGG | - | chr8_4:13357886-13357905 | None:intergenic | 25.0% |
| !! | TATAGTCTTAGTAATCAATC+TGG | + | chr8_4:13358097-13358116 | Msa1314410:CDS | 25.0% |
| !! | ATAGTCTTAGTAATCAATCT+GGG | + | chr8_4:13358098-13358117 | Msa1314410:CDS | 25.0% |
| ! | AAGACTGGAAAATCTTAATA+TGG | + | chr8_4:13358552-13358571 | Msa1314410:CDS | 25.0% |
| !! | GTCAAGTTCTAATAAAAGTA+CGG | + | chr8_4:13358699-13358718 | Msa1314410:CDS | 25.0% |
| !! | TCAAGTTCTAATAAAAGTAC+GGG | + | chr8_4:13358700-13358719 | Msa1314410:CDS | 25.0% |
| ! | GAAAAATATCACATCTCTTA+TGG | + | chr8_4:13358870-13358889 | Msa1314410:CDS | 25.0% |
| ! | AAACAGGGATAAAAACATAA+AGG | - | chr8_4:13358940-13358959 | None:intergenic | 25.0% |
| ! | AATTTATAACAATGTCTGTG+TGG | + | chr8_4:13359648-13359667 | Msa1314410:intron | 25.0% |
| ! | GAAAATTAACATAAACTGCA+TGG | - | chr8_4:13360031-13360050 | None:intergenic | 25.0% |
| ! | TTTCATATGCATTCTTACTT+CGG | + | chr8_4:13360047-13360066 | Msa1314410:intron | 25.0% |
| ! | TAAGACATTAATGACATATC+AGG | - | chr8_4:13360822-13360841 | None:intergenic | 25.0% |
| ! | ATGATTCACTCGTAATATAT+GGG | - | chr8_4:13360846-13360865 | None:intergenic | 25.0% |
| !!! | TCAGTTTTTCTCTAAAATTG+TGG | + | chr8_4:13360865-13360884 | Msa1314410:intron | 25.0% |
| !!! | CAGTTTTTCTCTAAAATTGT+GGG | + | chr8_4:13360866-13360885 | Msa1314410:intron | 25.0% |
| !!! | AGTTTTTCTCTAAAATTGTG+GGG | + | chr8_4:13360867-13360886 | Msa1314410:intron | 25.0% |
| ! | TTGGAATTTCATTATTTCCA+GGG | - | chr8_4:13360907-13360926 | None:intergenic | 25.0% |
| !! | TTTGGAATTTCATTATTTCC+AGG | - | chr8_4:13360908-13360927 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTAGCATGTTTTG+TGG | + | chr8_4:13361198-13361217 | Msa1314410:intron | 25.0% |
| !!! | TTTTAGTTAGCATGTTTTGT+GGG | + | chr8_4:13361199-13361218 | Msa1314410:intron | 25.0% |
| !! | GTTCAGTTTTTAAACATTTG+AGG | - | chr8_4:13361299-13361318 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTAAAAACTGAAC+CGG | - | chr8_4:13361396-13361415 | None:intergenic | 25.0% |
| !!! | ATCAGATGTTTAAAGTATTG+AGG | + | chr8_4:13361825-13361844 | Msa1314410:three_prime_UTR | 25.0% |
| AGAAATTGAACTAACCATAG+AGG | - | chr8_4:13353634-13353653 | None:intergenic | 30.0% | |
| ACAACGAAAATGCAATAAAG+GGG | - | chr8_4:13353700-13353719 | None:intergenic | 30.0% | |
| !! | TGTTGATGTTTTTGTGTTTG+TGG | + | chr8_4:13353773-13353792 | Msa1314410:intron | 30.0% |
| !!! | AATTGGAGTTTTGGTTTCTA+AGG | + | chr8_4:13353969-13353988 | Msa1314410:intron | 30.0% |
| TGCAAAGTTAGGAACTAATT+TGG | + | chr8_4:13354416-13354435 | Msa1314410:intron | 30.0% | |
| AAAGTTAGGAACTAATTTGG+TGG | + | chr8_4:13354419-13354438 | Msa1314410:intron | 30.0% | |
| ! | TTTTATAGGTTGTGTACTTG+AGG | + | chr8_4:13354550-13354569 | Msa1314410:intron | 30.0% |
| TATTCAATGGAAACAGTTGT+TGG | + | chr8_4:13354586-13354605 | Msa1314410:exon | 30.0% | |
| GAATTGAGGATTATGATGAT+GGG | + | chr8_4:13354608-13354627 | Msa1314410:CDS | 30.0% | |
| ATGATAAGACTAGACATGAT+AGG | + | chr8_4:13354817-13354836 | Msa1314410:intron | 30.0% | |
| AACACGTAGATTATGTAGTA+AGG | + | chr8_4:13354937-13354956 | Msa1314410:intron | 30.0% | |
| CAAAGTAACAAAGACAGATT+GGG | - | chr8_4:13355125-13355144 | None:intergenic | 30.0% | |
| TCAAAGTAACAAAGACAGAT+TGG | - | chr8_4:13355126-13355145 | None:intergenic | 30.0% | |
| TCTTAATTATTAGATTGGGC+GGG | - | chr8_4:13355177-13355196 | None:intergenic | 30.0% | |
| GGGCTTCTTAATTATTAGAT+TGG | - | chr8_4:13355182-13355201 | None:intergenic | 30.0% | |
| !! | AGAATGATTGCTTGTCATTT+TGG | + | chr8_4:13355242-13355261 | Msa1314410:intron | 30.0% |
| !!! | AGCATAACTTTTTTTCTTGC+CGG | + | chr8_4:13355266-13355285 | Msa1314410:intron | 30.0% |
| ! | TTTTCCTTTTCTTCCAGAAT+TGG | + | chr8_4:13355334-13355353 | Msa1314410:intron | 30.0% |
| ! | GATATTTTGTAGTAGATTGC+AGG | - | chr8_4:13355360-13355379 | None:intergenic | 30.0% |
| !!! | TTTTTTAATGTTGACGGGTT+CGG | + | chr8_4:13355631-13355650 | Msa1314410:intron | 30.0% |
| !! | GAAGTGTTTTTCCTTAAACA+GGG | - | chr8_4:13355747-13355766 | None:intergenic | 30.0% |
| GAATTTATTGTGTGGTGAAA+AGG | + | chr8_4:13356244-13356263 | Msa1314410:intron | 30.0% | |
| !! | CGTGATTTGTACTTTTATCT+AGG | + | chr8_4:13356346-13356365 | Msa1314410:intron | 30.0% |
| TGATATCTGATATGATGTTC+AGG | + | chr8_4:13356387-13356406 | Msa1314410:intron | 30.0% | |
| !! | TTAGAGTCAACTATTTTTCC+AGG | + | chr8_4:13356648-13356667 | Msa1314410:intron | 30.0% |
| !! | TAGAGTCAACTATTTTTCCA+GGG | + | chr8_4:13356649-13356668 | Msa1314410:intron | 30.0% |
| !! | AGTTTTATCTCTGAAAAACC+AGG | + | chr8_4:13356695-13356714 | Msa1314410:intron | 30.0% |
| !! | GTTTTATCTCTGAAAAACCA+GGG | + | chr8_4:13356696-13356715 | Msa1314410:intron | 30.0% |
| ATAAACAACATTCAAATCCC+TGG | - | chr8_4:13356716-13356735 | None:intergenic | 30.0% | |
| TATGACTCAAATTTGTGTGT+TGG | + | chr8_4:13356755-13356774 | Msa1314410:intron | 30.0% | |
| GTGATGTATGCTTAGTTATA+TGG | + | chr8_4:13356874-13356893 | Msa1314410:intron | 30.0% | |
| GGTATTAGTTGGAAGAAAAT+AGG | - | chr8_4:13356968-13356987 | None:intergenic | 30.0% | |
| ATGCAGAAGAAACAACAAAA+AGG | - | chr8_4:13357114-13357133 | None:intergenic | 30.0% | |
| ! | TCATGATTCTTTTGAATGCT+TGG | + | chr8_4:13357154-13357173 | Msa1314410:intron | 30.0% |
| ! | CATGATTCTTTTGAATGCTT+GGG | + | chr8_4:13357155-13357174 | Msa1314410:intron | 30.0% |
| TTAATAAATAGGCTCATCAC+TGG | - | chr8_4:13357290-13357309 | None:intergenic | 30.0% | |
| ATAAATGACATAACTGCATC+AGG | + | chr8_4:13357313-13357332 | Msa1314410:intron | 30.0% | |
| TAAATGACATAACTGCATCA+GGG | + | chr8_4:13357314-13357333 | Msa1314410:intron | 30.0% | |
| TACTTTGTGATGCTATAGTT+TGG | + | chr8_4:13357495-13357514 | Msa1314410:intron | 30.0% | |
| AAGCATGTATATATGTACTC+TGG | - | chr8_4:13357647-13357666 | None:intergenic | 30.0% | |
| AGAGTACATATATACATGCT+TGG | + | chr8_4:13357646-13357665 | Msa1314410:intron | 30.0% | |
| TACATATATACATGCTTGGT+TGG | + | chr8_4:13357650-13357669 | Msa1314410:intron | 30.0% | |
| ACATATATACATGCTTGGTT+GGG | + | chr8_4:13357651-13357670 | Msa1314410:intron | 30.0% | |
| !!! | GTGTAGTTTTATTTGGAAAG+TGG | + | chr8_4:13357730-13357749 | Msa1314410:intron | 30.0% |
| AACAAAATACTACCAATGTC+AGG | - | chr8_4:13357854-13357873 | None:intergenic | 30.0% | |
| ATTTGTACATGAGAATGAAC+AGG | - | chr8_4:13357977-13357996 | None:intergenic | 30.0% | |
| AGAACTTCATGAACTGTTTA+AGG | + | chr8_4:13358255-13358274 | Msa1314410:CDS | 30.0% | |
| !! | GAACTGTTTAAGGTAACTTT+TGG | + | chr8_4:13358265-13358284 | Msa1314410:CDS | 30.0% |
| !! | TGTTTAAGGTAACTTTTGGT+CGG | + | chr8_4:13358269-13358288 | Msa1314410:CDS | 30.0% |
| TATAATGATTCAAAAGCCGT+GGG | + | chr8_4:13358490-13358509 | Msa1314410:CDS | 30.0% | |
| TCTTCAATATATCGCTTAGT+GGG | - | chr8_4:13358640-13358659 | None:intergenic | 30.0% | |
| TAGACGATCTCTTAAAAACA+GGG | - | chr8_4:13358955-13358974 | None:intergenic | 30.0% | |
| TTAGACGATCTCTTAAAAAC+AGG | - | chr8_4:13358956-13358975 | None:intergenic | 30.0% | |
| !! | GCTTTTCTCTGGTTATTTTA+AGG | + | chr8_4:13359120-13359139 | Msa1314410:intron | 30.0% |
| TCAATAGGATGCATTAGATT+TGG | - | chr8_4:13359146-13359165 | None:intergenic | 30.0% | |
| ATCCTATTGATGTTGTCTTT+AGG | + | chr8_4:13359156-13359175 | Msa1314410:intron | 30.0% | |
| AATAAAGTCGTTAGCAATCA+TGG | + | chr8_4:13359380-13359399 | Msa1314410:CDS | 30.0% | |
| TGCTAGTGATAGAATGTATA+AGG | + | chr8_4:13359495-13359514 | Msa1314410:intron | 30.0% | |
| ! | TGATATTTTCCAAATTCCTG+TGG | - | chr8_4:13359701-13359720 | None:intergenic | 30.0% |
| ! | TTACTTGTTTAAGATGTCGT+TGG | + | chr8_4:13359769-13359788 | Msa1314410:intron | 30.0% |
| TGAGTTCGTGTGTTTAATAA+AGG | - | chr8_4:13359831-13359850 | None:intergenic | 30.0% | |
| TATTCTTTATGAATTGGCCA+TGG | - | chr8_4:13359909-13359928 | None:intergenic | 30.0% | |
| TAGGAAGTGATAACAAGTAA+TGG | + | chr8_4:13359986-13360005 | Msa1314410:intron | 30.0% | |
| CATATCAAAACAGTCAGTTA+AGG | - | chr8_4:13360099-13360118 | None:intergenic | 30.0% | |
| !!! | CTTAACTGACTGTTTTGATA+TGG | + | chr8_4:13360097-13360116 | Msa1314410:intron | 30.0% |
| !!! | ATCATTTTGATTTTGTGGGT+TGG | + | chr8_4:13360176-13360195 | Msa1314410:intron | 30.0% |
| AGTTAATATTCCTACTGCTA+AGG | + | chr8_4:13360335-13360354 | Msa1314410:CDS | 30.0% | |
| GTTAATATTCCTACTGCTAA+GGG | + | chr8_4:13360336-13360355 | Msa1314410:CDS | 30.0% | |
| ATTGTTGATCTTGTGAAAAC+TGG | + | chr8_4:13360539-13360558 | Msa1314410:intron | 30.0% | |
| GATGATTCACTCGTAATATA+TGG | - | chr8_4:13360847-13360866 | None:intergenic | 30.0% | |
| CTCGATCAAATTAGTTCATT+CGG | + | chr8_4:13360950-13360969 | Msa1314410:intron | 30.0% | |
| TCGATCAAATTAGTTCATTC+GGG | + | chr8_4:13360951-13360970 | Msa1314410:intron | 30.0% | |
| ! | TCAATCATACTAGTCCTTTT+GGG | - | chr8_4:13361003-13361022 | None:intergenic | 30.0% |
| GCATTGTTCAGATAAAACAT+GGG | - | chr8_4:13361178-13361197 | None:intergenic | 30.0% | |
| AGCATTGTTCAGATAAAACA+TGG | - | chr8_4:13361179-13361198 | None:intergenic | 30.0% | |
| AAATTCAGGGAATGTTAGTA+AGG | - | chr8_4:13361245-13361264 | None:intergenic | 30.0% | |
| ! | CATTTCTAGAAAGTAACTTG+AGG | - | chr8_4:13361270-13361289 | None:intergenic | 30.0% |
| !! | TTGTGGTTAATTGGTGCTTT+TGG | + | chr8_4:13353790-13353809 | Msa1314410:intron | 35.0% |
| !! | TGTGGTTAATTGGTGCTTTT+GGG | + | chr8_4:13353791-13353810 | Msa1314410:intron | 35.0% |
| TTGCATGTGTTGGAATATAG+AGG | + | chr8_4:13353908-13353927 | Msa1314410:intron | 35.0% | |
| TTGATTGTAAGGGACGAATT+TGG | - | chr8_4:13354132-13354151 | None:intergenic | 35.0% | |
| AGTCATTCTAACAACATGGT+AGG | + | chr8_4:13354216-13354235 | Msa1314410:intron | 35.0% | |
| GTCATTCTAACAACATGGTA+GGG | + | chr8_4:13354217-13354236 | Msa1314410:intron | 35.0% | |
| TACAGATTGTGTACTTGTGT+TGG | + | chr8_4:13354489-13354508 | Msa1314410:intron | 35.0% | |
| !! | TGCATGAGGTTGATATTCAA+TGG | + | chr8_4:13354573-13354592 | Msa1314410:exon | 35.0% |
| GGAATTGAGGATTATGATGA+TGG | + | chr8_4:13354607-13354626 | Msa1314410:CDS | 35.0% | |
| AAGTTTGTACACAACTGGAT+TGG | - | chr8_4:13354695-13354714 | None:intergenic | 35.0% | |
| ! | CAGTTGTGTACAAACTTGTT+CGG | + | chr8_4:13354698-13354717 | Msa1314410:CDS | 35.0% |
| ! | AGTTGTGTACAAACTTGTTC+GGG | + | chr8_4:13354699-13354718 | Msa1314410:CDS | 35.0% |
| ! | TTACAAATTTTCCCCACACA+TGG | - | chr8_4:13354785-13354804 | None:intergenic | 35.0% |
| AATGACAACATTAGAGAGAG+AGG | + | chr8_4:13354846-13354865 | Msa1314410:intron | 35.0% | |
| !! | TAGAAAAGATGGTGGAATCT+CGG | + | chr8_4:13354886-13354905 | Msa1314410:intron | 35.0% |
| CACTTCATGGACAATGATTA+GGG | - | chr8_4:13355025-13355044 | None:intergenic | 35.0% | |
| ACACTTCATGGACAATGATT+AGG | - | chr8_4:13355026-13355045 | None:intergenic | 35.0% | |
| CTTAATTATTAGATTGGGCG+GGG | - | chr8_4:13355176-13355195 | None:intergenic | 35.0% | |
| CTAGACTATAAAAGGAAGAC+TGG | - | chr8_4:13355391-13355410 | None:intergenic | 35.0% | |
| ! | GTTCTAAATCGTATGATCGT+GGG | - | chr8_4:13355482-13355501 | None:intergenic | 35.0% |
| CACGATCATACGATTTAGAA+CGG | + | chr8_4:13355481-13355500 | Msa1314410:intron | 35.0% | |
| ! | ACGATCATACGATTTAGAAC+GGG | + | chr8_4:13355482-13355501 | Msa1314410:intron | 35.0% |
| !!! | ATTGTAGTTTTTAGGATCGG+TGG | + | chr8_4:13355531-13355550 | Msa1314410:intron | 35.0% |
| TGCAAAAAATTCCCCAATCT+GGG | + | chr8_4:13355584-13355603 | Msa1314410:intron | 35.0% | |
| CAAAAACTAAACCCAGATTG+GGG | - | chr8_4:13355598-13355617 | None:intergenic | 35.0% | |
| CCAAAAACTAAACCCAGATT+GGG | - | chr8_4:13355599-13355618 | None:intergenic | 35.0% | |
| !!! | CCAATCTGGGTTTAGTTTTT+GGG | + | chr8_4:13355597-13355616 | Msa1314410:intron | 35.0% |
| !!! | TTTTTAATGTTGACGGGTTC+GGG | + | chr8_4:13355632-13355651 | Msa1314410:intron | 35.0% |
| !!! | GGAAGTGTTTTTCCTTAAAC+AGG | - | chr8_4:13355748-13355767 | None:intergenic | 35.0% |
| CATATATGTACTCTATGCAG+AGG | - | chr8_4:13355913-13355932 | None:intergenic | 35.0% | |
| CTCTGCATAGAGTACATATA+TGG | + | chr8_4:13355911-13355930 | Msa1314410:intron | 35.0% | |
| !! | TGATATGATGTTCAGGTTGA+AGG | + | chr8_4:13356394-13356413 | Msa1314410:intron | 35.0% |
| ATTACTTCATCATCTGTTGC+AGG | - | chr8_4:13356436-13356455 | None:intergenic | 35.0% | |
| TGCAACAGATGATGAAGTAA+TGG | + | chr8_4:13356435-13356454 | Msa1314410:CDS | 35.0% | |
| AACAGATGATGAAGTAATGG+AGG | + | chr8_4:13356438-13356457 | Msa1314410:CDS | 35.0% | |
| TCAATCGAAAGATCATCTTC+TGG | + | chr8_4:13356535-13356554 | Msa1314410:CDS | 35.0% | |
| CAATCGAAAGATCATCTTCT+GGG | + | chr8_4:13356536-13356555 | Msa1314410:CDS | 35.0% | |
| !! | ATTTGTGTGTTGGTGTCTTT+TGG | + | chr8_4:13356765-13356784 | Msa1314410:intron | 35.0% |
| !! | TTTGTGTGTTGGTGTCTTTT+GGG | + | chr8_4:13356766-13356785 | Msa1314410:intron | 35.0% |
| ! | CGCTTATCACTTGAGATTTT+TGG | + | chr8_4:13356840-13356859 | Msa1314410:intron | 35.0% |
| !!! | CACTTGAGATTTTTGGTTGA+TGG | + | chr8_4:13356847-13356866 | Msa1314410:intron | 35.0% |
| ! | TTTTCTTCCAACTAATACCC+AGG | + | chr8_4:13356969-13356988 | Msa1314410:intron | 35.0% |
| GAAGCTAAATGCAAAGTTTC+AGG | + | chr8_4:13357028-13357047 | Msa1314410:CDS | 35.0% | |
| ! | AATGCAAAGTTTCAGGTGAT+TGG | + | chr8_4:13357035-13357054 | Msa1314410:intron | 35.0% |
| TTTGAATGCTTGGGAAAAGT+TGG | + | chr8_4:13357164-13357183 | Msa1314410:intron | 35.0% | |
| AAATGACATAACTGCATCAG+GGG | + | chr8_4:13357315-13357334 | Msa1314410:intron | 35.0% | |
| ! | GTATTGCAACTTTTCCATCT+TGG | + | chr8_4:13357564-13357583 | Msa1314410:intron | 35.0% |
| TACGTTTATTGAGTCCAAGA+TGG | - | chr8_4:13357581-13357600 | None:intergenic | 35.0% | |
| GTATATATGTACTCTGGTCA+AGG | - | chr8_4:13357641-13357660 | None:intergenic | 35.0% | |
| ! | GGTGCATAGTTATGGTTTTT+GGG | + | chr8_4:13357812-13357831 | Msa1314410:intron | 35.0% |
| ATGTGTTCATATCCTGACAT+TGG | + | chr8_4:13357839-13357858 | Msa1314410:intron | 35.0% | |
| TATTGAACAGATGCTGCAAA+AGG | + | chr8_4:13357913-13357932 | Msa1314410:intron | 35.0% | |
| GAAATTTATCAGCAGAACAC+TGG | - | chr8_4:13358006-13358025 | None:intergenic | 35.0% | |
| ATTTCCTGTCAGAAATGAGA+AGG | + | chr8_4:13358021-13358040 | Msa1314410:CDS | 35.0% | |
| GGAAAAATCATGCTTCAAAG+CGG | - | chr8_4:13358194-13358213 | None:intergenic | 35.0% | |
| ! | CATGATTTTTCCATGACAGA+TGG | + | chr8_4:13358202-13358221 | Msa1314410:CDS | 35.0% |
| ACATATTTCTCCATCTGTCA+TGG | - | chr8_4:13358215-13358234 | None:intergenic | 35.0% | |
| GACAGATGGAGAAATATGTT+TGG | + | chr8_4:13358216-13358235 | Msa1314410:CDS | 35.0% | |
| !! | GTTTAAGGTAACTTTTGGTC+GGG | + | chr8_4:13358270-13358289 | Msa1314410:CDS | 35.0% |
| GGAAAATATGGCTGTACAAA+GGG | + | chr8_4:13358459-13358478 | Msa1314410:CDS | 35.0% | |
| GTATAATGATTCAAAAGCCG+TGG | + | chr8_4:13358489-13358508 | Msa1314410:CDS | 35.0% | |
| GGAACATGAATTAGAAGATG+AGG | + | chr8_4:13358573-13358592 | Msa1314410:CDS | 35.0% | |
| CTCTTCAATATATCGCTTAG+TGG | - | chr8_4:13358641-13358660 | None:intergenic | 35.0% | |
| AATCTAGAGAGCAAATTCCT+AGG | + | chr8_4:13358674-13358693 | Msa1314410:CDS | 35.0% | |
| TTATTAGAACTTGACGACCT+AGG | - | chr8_4:13358694-13358713 | None:intergenic | 35.0% | |
| ! | TCCAAATTCCTTGTGTTACT+CGG | + | chr8_4:13358827-13358846 | Msa1314410:CDS | 35.0% |
| ! | AGAGATGTGATATTTTTCCG+TGG | - | chr8_4:13358868-13358887 | None:intergenic | 35.0% |
| AGTAAACCAATGCATTTCCT+AGG | - | chr8_4:13359204-13359223 | None:intergenic | 35.0% | |
| TTTCAGAAATTCCATCCAAC+TGG | + | chr8_4:13359332-13359351 | Msa1314410:intron | 35.0% | |
| ! | TGATGCTGATAGTGAAATTG+AGG | + | chr8_4:13359406-13359425 | Msa1314410:CDS | 35.0% |
| ATCACTAGCAAATGCTTAGT+TGG | - | chr8_4:13359485-13359504 | None:intergenic | 35.0% | |
| CGTATGTATGTTTGTCTTTG+TGG | + | chr8_4:13359551-13359570 | Msa1314410:intron | 35.0% | |
| TTCCTAATGCAATCACTCAA+AGG | - | chr8_4:13359729-13359748 | None:intergenic | 35.0% | |
| TTAAACACACGAACTCAATG+TGG | + | chr8_4:13359834-13359853 | Msa1314410:intron | 35.0% | |
| GGCCAATTCATAAAGAATAG+CGG | + | chr8_4:13359910-13359929 | Msa1314410:intron | 35.0% | |
| !! | AAAGGCACCATAAAACATCA+CGG | - | chr8_4:13359938-13359957 | None:intergenic | 35.0% |
| ! | CTTGAGGGATCTATCTTTTT+AGG | - | chr8_4:13360294-13360313 | None:intergenic | 35.0% |
| ATTAACTATATTGCCCTCTG+TGG | - | chr8_4:13360322-13360341 | None:intergenic | 35.0% | |
| CAGTTTCAATACCTCAACAA+GGG | - | chr8_4:13360394-13360413 | None:intergenic | 35.0% | |
| AAACTGGTAGAGAACATCTA+AGG | + | chr8_4:13360555-13360574 | Msa1314410:intron | 35.0% | |
| !! | GAACATCTAAGGCTAGATTT+TGG | + | chr8_4:13360566-13360585 | Msa1314410:intron | 35.0% |
| ! | GAATCCATATTTTGCTTTGC+AGG | + | chr8_4:13360609-13360628 | Msa1314410:intron | 35.0% |
| TTGTCCTGCAAAGCAAAATA+TGG | - | chr8_4:13360616-13360635 | None:intergenic | 35.0% | |
| AAATATGCCAACACATTCCA+CGG | - | chr8_4:13360780-13360799 | None:intergenic | 35.0% | |
| CGAATGAACTAATTTGATCG+AGG | - | chr8_4:13360952-13360971 | None:intergenic | 35.0% | |
| ACTATATTGACATGCCCAAA+AGG | + | chr8_4:13360986-13361005 | Msa1314410:intron | 35.0% | |
| ! | CTCAATCATACTAGTCCTTT+TGG | - | chr8_4:13361004-13361023 | None:intergenic | 35.0% |
| ! | CAAAAGGACTAGTATGATTG+AGG | + | chr8_4:13361002-13361021 | Msa1314410:intron | 35.0% |
| GTAACTTGAGGACAAATTCA+GGG | - | chr8_4:13361258-13361277 | None:intergenic | 35.0% | |
| AGTAACTTGAGGACAAATTC+AGG | - | chr8_4:13361259-13361278 | None:intergenic | 35.0% | |
| !!! | GTTTTAAAAACTGAACCGGA+CGG | - | chr8_4:13361392-13361411 | None:intergenic | 35.0% |
| GTTGATGTAATCATCAAAGC+TGG | - | chr8_4:13361465-13361484 | None:intergenic | 35.0% | |
| ! | ACTAAAATTGGCTCAGGAAT+CGG | - | chr8_4:13361534-13361553 | None:intergenic | 35.0% |
| TCTCTCACACGTACTAAAAT+TGG | - | chr8_4:13361546-13361565 | None:intergenic | 35.0% | |
| TTGCTTGAACTGGAATTTGA+AGG | - | chr8_4:13361594-13361613 | None:intergenic | 35.0% | |
| TCTTGCAGTGTTAAGCAATT+TGG | - | chr8_4:13361701-13361720 | None:intergenic | 35.0% | |
| TACGCATCTAAACAAAGGAT+TGG | - | chr8_4:13361771-13361790 | None:intergenic | 35.0% | |
| AACTCTACGCATCTAAACAA+AGG | - | chr8_4:13361776-13361795 | None:intergenic | 35.0% | |
| ! | GTAGAGTTTTGCAATGTTGT+AGG | + | chr8_4:13361788-13361807 | Msa1314410:three_prime_UTR | 35.0% |
| ! | ATGTGGGTTTGGTTTAGTGT+AGG | - | chr8_4:13353456-13353475 | None:intergenic | 40.0% |
| TCAACTCGTTCTTTCCTCTA+TGG | + | chr8_4:13353617-13353636 | Msa1314410:five_prime_UTR | 40.0% | |
| !!! | AATTGGTGCTTTTGGGTTGT+TGG | + | chr8_4:13353798-13353817 | Msa1314410:intron | 40.0% |
| !!! | ATTGGTGCTTTTGGGTTGTT+GGG | + | chr8_4:13353799-13353818 | Msa1314410:intron | 40.0% |
| !! | GTTATTTGGGTTGCATGTGT+TGG | + | chr8_4:13354076-13354095 | Msa1314410:intron | 40.0% |
| TTGCATGTGTTGGAATAGAG+AGG | + | chr8_4:13354086-13354105 | Msa1314410:intron | 40.0% | |
| ATTGTAAGGGACGAATTTGG+TGG | - | chr8_4:13354129-13354148 | None:intergenic | 40.0% | |
| ! | GGGACGAAATTGATAGTTAG+TGG | + | chr8_4:13354237-13354256 | Msa1314410:intron | 40.0% |
| GTACTTGTGTTGGAATAGAG+AGG | + | chr8_4:13354499-13354518 | Msa1314410:intron | 40.0% | |
| GGAAACAGTTGTTGGAATTG+AGG | + | chr8_4:13354594-13354613 | Msa1314410:CDS | 40.0% | |
| !! | GATTATGATGATGGGAAGCT+TGG | + | chr8_4:13354616-13354635 | Msa1314410:CDS | 40.0% |
| CGAACAAGTTTGTACACAAC+TGG | - | chr8_4:13354700-13354719 | None:intergenic | 40.0% | |
| AGCACCAATCGTAGAAAAGA+TGG | + | chr8_4:13354875-13354894 | Msa1314410:intron | 40.0% | |
| ACCAATCGTAGAAAAGATGG+TGG | + | chr8_4:13354878-13354897 | Msa1314410:intron | 40.0% | |
| ! | TCCACCATCTTTTCTACGAT+TGG | - | chr8_4:13354882-13354901 | None:intergenic | 40.0% |
| TAGTAAGGAGAGTAGATCAG+CGG | + | chr8_4:13354952-13354971 | Msa1314410:intron | 40.0% | |
| GAGGATAGTCAAATCACTAG+CGG | + | chr8_4:13354974-13354993 | Msa1314410:intron | 40.0% | |
| ! | GATTAGGGCTTTAGTGTAGT+AGG | - | chr8_4:13355010-13355029 | None:intergenic | 40.0% |
| AGTAACAAAGACAGATTGGG+CGG | - | chr8_4:13355122-13355141 | None:intergenic | 40.0% | |
| CACTGCAATACAACGATCAA+AGG | - | chr8_4:13355429-13355448 | None:intergenic | 40.0% | |
| ! | CGTTCTAAATCGTATGATCG+TGG | - | chr8_4:13355483-13355502 | None:intergenic | 40.0% |
| !!! | TAGTTTTTAGGATCGGTGGT+AGG | + | chr8_4:13355535-13355554 | Msa1314410:intron | 40.0% |
| GTAGGATCATAGAAATCACG+AGG | + | chr8_4:13355553-13355572 | Msa1314410:intron | 40.0% | |
| CTGCAAAAAATTCCCCAATC+TGG | + | chr8_4:13355583-13355602 | Msa1314410:intron | 40.0% | |
| !!! | CCCAATCTGGGTTTAGTTTT+TGG | + | chr8_4:13355596-13355615 | Msa1314410:intron | 40.0% |
| CCCAAAAACTAAACCCAGAT+TGG | - | chr8_4:13355600-13355619 | None:intergenic | 40.0% | |
| TCCTTAAACAGGGTGTGTAT+CGG | - | chr8_4:13355737-13355756 | None:intergenic | 40.0% | |
| TCTAAGAGAAACACGCTTAG+TGG | - | chr8_4:13355861-13355880 | None:intergenic | 40.0% | |
| CATGGTGCACCTTTGTAATT+TGG | + | chr8_4:13356159-13356178 | Msa1314410:intron | 40.0% | |
| !! | ATGTTCAGGTTGAAGGTGAT+GGG | + | chr8_4:13356401-13356420 | Msa1314410:intron | 40.0% |
| AGCGAGAGAAACAAAACTTC+AGG | - | chr8_4:13356824-13356843 | None:intergenic | 40.0% | |
| AATGACATAACTGCATCAGG+GGG | + | chr8_4:13357316-13357335 | Msa1314410:intron | 40.0% | |
| ! | GGTTAATGGGTGCATAGTTA+TGG | + | chr8_4:13357804-13357823 | Msa1314410:intron | 40.0% |
| ! | GGGTGCATAGTTATGGTTTT+TGG | + | chr8_4:13357811-13357830 | Msa1314410:intron | 40.0% |
| GATGCTGCAAAAGGTTAAAC+AGG | + | chr8_4:13357922-13357941 | Msa1314410:intron | 40.0% | |
| AGAACCTTCTCATTTCTGAC+AGG | - | chr8_4:13358028-13358047 | None:intergenic | 40.0% | |
| ATAGAATGTGCTTCCTGGAA+TGG | - | chr8_4:13358061-13358080 | None:intergenic | 40.0% | |
| ATGCTATAGAATGTGCTTCC+TGG | - | chr8_4:13358066-13358085 | None:intergenic | 40.0% | |
| CTACTGTGAAAGACAAACAG+TGG | + | chr8_4:13358296-13358315 | Msa1314410:CDS | 40.0% | |
| TGAAAGACAAACAGTGGTTG+AGG | + | chr8_4:13358302-13358321 | Msa1314410:CDS | 40.0% | |
| TGTAACCTCTGCGGAAAATA+TGG | + | chr8_4:13358447-13358466 | Msa1314410:CDS | 40.0% | |
| CGGAAAATATGGCTGTACAA+AGG | + | chr8_4:13358458-13358477 | Msa1314410:CDS | 40.0% | |
| !! | GTCTTGTTTCAGTAGCAACT+TGG | - | chr8_4:13358537-13358556 | None:intergenic | 40.0% |
| AGTTGCTACTGAAACAAGAC+TGG | + | chr8_4:13358537-13358556 | Msa1314410:CDS | 40.0% | |
| ! | TAAAAGTACGGGACACATAC+AGG | + | chr8_4:13358711-13358730 | Msa1314410:CDS | 40.0% |
| GTGGTAAATGTTCTTGTCTC+TGG | - | chr8_4:13358778-13358797 | None:intergenic | 40.0% | |
| AGACAAGAACATTTACCACC+AGG | + | chr8_4:13358779-13358798 | Msa1314410:CDS | 40.0% | |
| ! | CCAAATTCCTTGTGTTACTC+GGG | + | chr8_4:13358828-13358847 | Msa1314410:CDS | 40.0% |
| !! | TAACCAGAGAAAAGCGTCAA+AGG | - | chr8_4:13359115-13359134 | None:intergenic | 40.0% |
| GGCCTAAAGACAACATCAAT+AGG | - | chr8_4:13359161-13359180 | None:intergenic | 40.0% | |
| TGGAACATTCAAGAGACTTC+TGG | - | chr8_4:13359241-13359260 | None:intergenic | 40.0% | |
| AATAACTCTTAACCTGCCAC+AGG | + | chr8_4:13359682-13359701 | Msa1314410:intron | 40.0% | |
| ! | ATTTTCCAAATTCCTGTGGC+AGG | - | chr8_4:13359697-13359716 | None:intergenic | 40.0% |
| CACCTTTGAGTGATTGCATT+AGG | + | chr8_4:13359724-13359743 | Msa1314410:intron | 40.0% | |
| GTGTTCTCAAATATCGACCA+TGG | + | chr8_4:13359866-13359885 | Msa1314410:intron | 40.0% | |
| TTCTCAAATATCGACCATGG+CGG | + | chr8_4:13359869-13359888 | Msa1314410:intron | 40.0% | |
| TCTTTATGAATTGGCCATGG+CGG | - | chr8_4:13359906-13359925 | None:intergenic | 40.0% | |
| CGCCGCTATTCTTTATGAAT+TGG | - | chr8_4:13359915-13359934 | None:intergenic | 40.0% | |
| GAAAGAGAAGATGCAGTATC+CGG | + | chr8_4:13360230-13360249 | Msa1314410:CDS | 40.0% | |
| ATGCAGTATCCGGTAATGAT+TGG | + | chr8_4:13360240-13360259 | Msa1314410:CDS | 40.0% | |
| TCAGTTGTGCCAATCATTAC+CGG | - | chr8_4:13360252-13360271 | None:intergenic | 40.0% | |
| AATATTCCTACTGCTAAGGG+TGG | + | chr8_4:13360339-13360358 | Msa1314410:CDS | 40.0% | |
| CCAGTTTCAATACCTCAACA+AGG | - | chr8_4:13360395-13360414 | None:intergenic | 40.0% | |
| !! | CCTTGTTGAGGTATTGAAAC+TGG | + | chr8_4:13360392-13360411 | Msa1314410:CDS | 40.0% |
| !! | GAGGTATTGAAACTGGTTGA+TGG | + | chr8_4:13360399-13360418 | Msa1314410:CDS | 40.0% |
| ACGATGTGAGTACGAAGAAA+AGG | - | chr8_4:13360472-13360491 | None:intergenic | 40.0% | |
| ! | ATTTTGCTTTGCAGGACAAG+TGG | + | chr8_4:13360617-13360636 | Msa1314410:intron | 40.0% |
| TCAGTTTGATCTCACTGAAG+TGG | + | chr8_4:13360711-13360730 | Msa1314410:intron | 40.0% | |
| CAGTTTGATCTCACTGAAGT+GGG | + | chr8_4:13360712-13360731 | Msa1314410:intron | 40.0% | |
| !! | ATTATAGGCGTCGAGCAATT+TGG | - | chr8_4:13361073-13361092 | None:intergenic | 40.0% |
| TTCAGGGAATGTTAGTAAGG+AGG | - | chr8_4:13361242-13361261 | None:intergenic | 40.0% | |
| AACTGAACCAGACATCAACA+TGG | + | chr8_4:13361311-13361330 | Msa1314410:intron | 40.0% | |
| ACTGAACCAGACATCAACAT+GGG | + | chr8_4:13361312-13361331 | Msa1314410:intron | 40.0% | |
| CAACTGATTGAACCGTGATT+GGG | - | chr8_4:13361367-13361386 | None:intergenic | 40.0% | |
| TCAACTGATTGAACCGTGAT+TGG | - | chr8_4:13361368-13361387 | None:intergenic | 40.0% | |
| GCTTATGACAGATGAATTCG+CGG | + | chr8_4:13361493-13361512 | Msa1314410:intron | 40.0% | |
| ! | TAAAATTGGCTCAGGAATCG+GGG | - | chr8_4:13361532-13361551 | None:intergenic | 40.0% |
| ! | CTAAAATTGGCTCAGGAATC+GGG | - | chr8_4:13361533-13361552 | None:intergenic | 40.0% |
| ! | ACACGTACTAAAATTGGCTC+AGG | - | chr8_4:13361540-13361559 | None:intergenic | 40.0% |
| ! | TCAAGCAAGTTGACAGCTAA+TGG | + | chr8_4:13361606-13361625 | Msa1314410:CDS | 40.0% |
| ACAGCTAATGGTGCAACTAA+TGG | + | chr8_4:13361618-13361637 | Msa1314410:CDS | 40.0% | |
| !! | CTGTGGCGAGATTTTAGCAA+CGG | - | chr8_4:13353409-13353428 | None:intergenic | 45.0% |
| TGTAGGTGAGAGTGGCTTAT+TGG | - | chr8_4:13353439-13353458 | None:intergenic | 45.0% | |
| TGGTTTAGTGTAGGTGAGAG+TGG | - | chr8_4:13353447-13353466 | None:intergenic | 45.0% | |
| ! | GTTACTTGGGTTGCATGTGT+TGG | + | chr8_4:13353898-13353917 | Msa1314410:intron | 45.0% |
| ! | TCTGAGATGTACATCGTGTC+AGG | + | chr8_4:13354374-13354393 | Msa1314410:intron | 45.0% |
| CTGAGATGTACATCGTGTCA+GGG | + | chr8_4:13354375-13354394 | Msa1314410:intron | 45.0% | |
| ! | TGATAGCGCACTGCAAAGTT+AGG | + | chr8_4:13354405-13354424 | Msa1314410:intron | 45.0% |
| TTGTGTACTTGAGGTGCATG+AGG | + | chr8_4:13354559-13354578 | Msa1314410:five_prime_UTR | 45.0% | |
| ATGCTTTGTCTTCACCGAAG+CGG | + | chr8_4:13354665-13354684 | Msa1314410:CDS | 45.0% | |
| ! | ACTGGATTGGAAATCCGCTT+CGG | - | chr8_4:13354682-13354701 | None:intergenic | 45.0% |
| !! | AGTTTTGTGTGCTCCATGTG+TGG | + | chr8_4:13354769-13354788 | Msa1314410:intron | 45.0% |
| ! | GTTTTGTGTGCTCCATGTGT+GGG | + | chr8_4:13354770-13354789 | Msa1314410:intron | 45.0% |
| ! | TTTTGTGTGCTCCATGTGTG+GGG | + | chr8_4:13354771-13354790 | Msa1314410:intron | 45.0% |
| ACAACATTAGAGAGAGAGGC+TGG | + | chr8_4:13354850-13354869 | Msa1314410:intron | 45.0% | |
| CAACATTAGAGAGAGAGGCT+GGG | + | chr8_4:13354851-13354870 | Msa1314410:intron | 45.0% | |
| ! | AATCTCGGCTTAGCTGGTTT+GGG | + | chr8_4:13354901-13354920 | Msa1314410:intron | 45.0% |
| AGTCAAATCACTAGCGGCAA+AGG | + | chr8_4:13354980-13354999 | Msa1314410:intron | 45.0% | |
| GTAACAAAGACAGATTGGGC+GGG | - | chr8_4:13355121-13355140 | None:intergenic | 45.0% | |
| ! | CAGGCCAATTCTGGAAGAAA+AGG | - | chr8_4:13355341-13355360 | None:intergenic | 45.0% |
| AGTAGATTGCAGGCCAATTC+TGG | - | chr8_4:13355350-13355369 | None:intergenic | 45.0% | |
| CCTTAAACAGGGTGTGTATC+GGG | - | chr8_4:13355736-13355755 | None:intergenic | 45.0% | |
| ACCTGCTACTGCCATTGAAA+CGG | + | chr8_4:13355778-13355797 | Msa1314410:intron | 45.0% | |
| GTACTCTATGCAGAGGAACT+AGG | - | chr8_4:13355906-13355925 | None:intergenic | 45.0% | |
| ATGATTCGTGCTACGATCCT+CGG | + | chr8_4:13356063-13356082 | Msa1314410:intron | 45.0% | |
| GTTTGAAAGATCGTAACCCG+AGG | - | chr8_4:13356083-13356102 | None:intergenic | 45.0% | |
| !! | GATGTTCAGGTTGAAGGTGA+TGG | + | chr8_4:13356400-13356419 | Msa1314410:intron | 45.0% |
| ! | TGATGAAGTAATGGAGGTCG+AGG | + | chr8_4:13356444-13356463 | Msa1314410:CDS | 45.0% |
| ! | ATCTTCTGGGAAGCTTCGAT+TGG | + | chr8_4:13356549-13356568 | Msa1314410:CDS | 45.0% |
| TCATTTAGCATGTGCTGTGC+TGG | + | chr8_4:13356620-13356639 | Msa1314410:intron | 45.0% | |
| ACAAGCAGCAAAGAAATCCC+TGG | - | chr8_4:13356669-13356688 | None:intergenic | 45.0% | |
| TGAAACGCCTGGGTATTAGT+TGG | - | chr8_4:13356979-13356998 | None:intergenic | 45.0% | |
| TACCCAGGCGTTTCACAATT+AGG | + | chr8_4:13356984-13357003 | Msa1314410:intron | 45.0% | |
| TGCCTAATTGTGAAACGCCT+GGG | - | chr8_4:13356989-13357008 | None:intergenic | 45.0% | |
| ! | TTCACAATTAGGCACTGCAG+AGG | + | chr8_4:13356995-13357014 | Msa1314410:CDS | 45.0% |
| ATGACATAACTGCATCAGGG+GGG | + | chr8_4:13357317-13357336 | Msa1314410:intron | 45.0% | |
| AGAAACTTCGCTTGTCGTCT+CGG | + | chr8_4:13357948-13357967 | Msa1314410:CDS | 45.0% | |
| ! | TCTGTCTGAAACTCCATTCC+AGG | + | chr8_4:13358045-13358064 | Msa1314410:CDS | 45.0% |
| ACCACTTTCTATCACTCCTC+CGG | - | chr8_4:13358149-13358168 | None:intergenic | 45.0% | |
| AAGACAAACAGTGGTTGAGG+AGG | + | chr8_4:13358305-13358324 | Msa1314410:CDS | 45.0% | |
| ! | TACAGCCATATTTTCCGCAG+AGG | - | chr8_4:13358455-13358474 | None:intergenic | 45.0% |
| AATGATTCAAAAGCCGTGGG+TGG | + | chr8_4:13358493-13358512 | Msa1314410:CDS | 45.0% | |
| GCTTCTCCAACATCTTATGC+CGG | + | chr8_4:13358733-13358752 | Msa1314410:CDS | 45.0% | |
| CTTCTCCAACATCTTATGCC+GGG | + | chr8_4:13358734-13358753 | Msa1314410:CDS | 45.0% | |
| TCTGGATAAGCATTCCTAGC+AGG | - | chr8_4:13358760-13358779 | None:intergenic | 45.0% | |
| TTAGACTCTCTTGGAGGTTC+TGG | + | chr8_4:13358802-13358821 | Msa1314410:CDS | 45.0% | |
| CCCGAGTAACACAAGGAATT+TGG | - | chr8_4:13358831-13358850 | None:intergenic | 45.0% | |
| GCATGCAATCAAACATGGCA+AGG | - | chr8_4:13359182-13359201 | None:intergenic | 45.0% | |
| CCTAGGCATGCAATCAAACA+TGG | - | chr8_4:13359187-13359206 | None:intergenic | 45.0% | |
| CCATGTTTGATTGCATGCCT+AGG | + | chr8_4:13359184-13359203 | Msa1314410:intron | 45.0% | |
| TGCATGCCTAGGAAATGCAT+TGG | + | chr8_4:13359195-13359214 | Msa1314410:intron | 45.0% | |
| ! | GACTTCTGGAAAGACACAAC+AGG | - | chr8_4:13359227-13359246 | None:intergenic | 45.0% |
| GAAATTCCATCCAACTGGCA+CGG | + | chr8_4:13359337-13359356 | Msa1314410:intron | 45.0% | |
| AAATTCCATCCAACTGGCAC+GGG | + | chr8_4:13359338-13359357 | Msa1314410:CDS | 45.0% | |
| !! | ACCTTCACAGGCATTGAACT+TGG | - | chr8_4:13359446-13359465 | None:intergenic | 45.0% |
| CTTAACCTGCCACAGGAATT+TGG | + | chr8_4:13359689-13359708 | Msa1314410:intron | 45.0% | |
| AACACACGAACTCAATGTGG+TGG | + | chr8_4:13359837-13359856 | Msa1314410:intron | 45.0% | |
| ACACACGAACTCAATGTGGT+GGG | + | chr8_4:13359838-13359857 | Msa1314410:intron | 45.0% | |
| TGATTGGCACAACTGATCCA+AGG | + | chr8_4:13360256-13360275 | Msa1314410:CDS | 45.0% | |
| TCGTACCTCTGTTGATCTCA+AGG | + | chr8_4:13360488-13360507 | Msa1314410:CDS | 45.0% | |
| GAGTACCTTGAGATCAACAG+AGG | - | chr8_4:13360496-13360515 | None:intergenic | 45.0% | |
| GGGTTTGTCAATTTAGACCC+TGG | + | chr8_4:13360887-13360906 | Msa1314410:intron | 45.0% | |
| AGTTCATTCGGGACAGTTAC+AGG | + | chr8_4:13360962-13360981 | Msa1314410:intron | 45.0% | |
| GTTCATTCGGGACAGTTACA+GGG | + | chr8_4:13360963-13360982 | Msa1314410:intron | 45.0% | |
| TGTTAGTAAGGAGGAACCAG+TGG | - | chr8_4:13361233-13361252 | None:intergenic | 45.0% | |
| TGTTTAAGCGGTTCAACCGT+GGG | - | chr8_4:13361343-13361362 | None:intergenic | 45.0% | |
| TTGTTTAAGCGGTTCAACCG+TGG | - | chr8_4:13361344-13361363 | None:intergenic | 45.0% | |
| ! | CCGTGATTGGGTTGTTTAAG+CGG | - | chr8_4:13361355-13361374 | None:intergenic | 45.0% |
| CCGCTTAAACAACCCAATCA+CGG | + | chr8_4:13361352-13361371 | Msa1314410:intron | 45.0% | |
| GTTCAATCAGTTGAACCGTC+CGG | + | chr8_4:13361374-13361393 | Msa1314410:intron | 45.0% | |
| ! | AGCTGTCAACTTGCTTGAAC+TGG | - | chr8_4:13361604-13361623 | None:intergenic | 45.0% |
| ATGGTGCAACTAATGGTGCA+AGG | + | chr8_4:13361625-13361644 | Msa1314410:CDS | 45.0% | |
| ! | AATGGTGCAAGGAGTATGCA+TGG | + | chr8_4:13361636-13361655 | Msa1314410:CDS | 45.0% |
| AGTATGCATGGAGACAGAGT+GGG | + | chr8_4:13361648-13361667 | Msa1314410:CDS | 45.0% | |
| !!! | TTAATTTTTTTTGAATTTTT+AGG | + | chr8_4:13354024-13354043 | Msa1314410:intron | 5.0% |
| !! | TTTATTAAGTTTATTTATTT+GGG | - | chr8_4:13355202-13355221 | None:intergenic | 5.0% |
| !!! | TTTTATTAAGTTTATTTATT+TGG | - | chr8_4:13355203-13355222 | None:intergenic | 5.0% |
| !!! | TTTATTTTAAATTTAAAACA+GGG | - | chr8_4:13355680-13355699 | None:intergenic | 5.0% |
| !!! | TTTTATTTTAAATTTAAAAC+AGG | - | chr8_4:13355681-13355700 | None:intergenic | 5.0% |
| !! | TCATTTATTTATTAATAAAT+AGG | - | chr8_4:13357301-13357320 | None:intergenic | 5.0% |
| !! | AATTAAATAGAAAAAAATAA+AGG | - | chr8_4:13360136-13360155 | None:intergenic | 5.0% |
| !! | AACAAAATAAAAAAAATAAT+GGG | - | chr8_4:13361039-13361058 | None:intergenic | 5.0% |
| !!! | AATACTTTTTTTTTTTTTTT+TGG | - | chr8_4:13361727-13361746 | None:intergenic | 5.0% |
| ! | GGCTTATTGGTTACGCTCTG+TGG | - | chr8_4:13353426-13353445 | None:intergenic | 50.0% |
| ATGGGAAGCTTGGAGACAGT+GGG | + | chr8_4:13354626-13354645 | Msa1314410:CDS | 50.0% | |
| GAATCTCGGCTTAGCTGGTT+TGG | + | chr8_4:13354900-13354919 | Msa1314410:intron | 50.0% | |
| TAAGGAGAGTAGATCAGCGG+AGG | + | chr8_4:13354955-13354974 | Msa1314410:intron | 50.0% | |
| !! | TAATGTTGACGGGTTCGGGT+CGG | + | chr8_4:13355636-13355655 | Msa1314410:intron | 50.0% |
| CCCGATACACACCCTGTTTA+AGG | + | chr8_4:13355733-13355752 | Msa1314410:intron | 50.0% | |
| CAGTAGCAGGTGAGGAAGAA+GGG | - | chr8_4:13355769-13355788 | None:intergenic | 50.0% | |
| TTCAATGGCAGTAGCAGGTG+AGG | - | chr8_4:13355777-13355796 | None:intergenic | 50.0% | |
| !!! | GCGTCGTCGCTTTGTTTTTC+CGG | + | chr8_4:13355800-13355819 | Msa1314410:intron | 50.0% |
| !!! | TCGTCGCTTTGTTTTTCCGG+TGG | + | chr8_4:13355803-13355822 | Msa1314410:intron | 50.0% |
| TGAAACAGAGGTCATGCCAC+CGG | - | chr8_4:13355822-13355841 | None:intergenic | 50.0% | |
| CGCAGGAAACAGTGAAACAG+AGG | - | chr8_4:13355834-13355853 | None:intergenic | 50.0% | |
| AGGCACTAGCACAGCATCTT+TGG | - | chr8_4:13355886-13355905 | None:intergenic | 50.0% | |
| TGATTCGTGCTACGATCCTC+GGG | + | chr8_4:13356064-13356083 | Msa1314410:intron | 50.0% | |
| !! | TTCAGGTTGAAGGTGATGGG+AGG | + | chr8_4:13356404-13356423 | Msa1314410:intron | 50.0% |
| ! | ATGCGTGTTGTTGCAGACAC+TGG | + | chr8_4:13356493-13356512 | Msa1314410:CDS | 50.0% |
| TGCAGACACTGGACAGAGTA+TGG | + | chr8_4:13356504-13356523 | Msa1314410:CDS | 50.0% | |
| ! | GAAGCTTCGATTGGAGTGCT+CGG | + | chr8_4:13356558-13356577 | Msa1314410:CDS | 50.0% |
| GTGCCTAATTGTGAAACGCC+TGG | - | chr8_4:13356990-13357009 | None:intergenic | 50.0% | |
| TGACATAACTGCATCAGGGG+GGG | + | chr8_4:13357318-13357337 | Msa1314410:intron | 50.0% | |
| GATCAGTGTTCCAGACCTTC+CGG | + | chr8_4:13358127-13358146 | Msa1314410:CDS | 50.0% | |
| CTTTCTATCACTCCTCCGGA+AGG | - | chr8_4:13358145-13358164 | None:intergenic | 50.0% | |
| TCCGGAGGAGTGATAGAAAG+TGG | + | chr8_4:13358145-13358164 | Msa1314410:CDS | 50.0% | |
| CAAAGCGGAATTGACAGCAG+AGG | - | chr8_4:13358179-13358198 | None:intergenic | 50.0% | |
| ACAAACAGTGGTTGAGGAGG+AGG | + | chr8_4:13358308-13358327 | Msa1314410:CDS | 50.0% | |
| ATCAACTTCGCAACCACCCA+CGG | - | chr8_4:13358509-13358528 | None:intergenic | 50.0% | |
| ATAAGCATTCCTAGCAGGCC+CGG | - | chr8_4:13358755-13358774 | None:intergenic | 50.0% | |
| ACCACCAGGTTAGACTCTCT+TGG | + | chr8_4:13358793-13358812 | Msa1314410:CDS | 50.0% | |
| TCCAAGAGAGTCTAACCTGG+TGG | - | chr8_4:13358797-13358816 | None:intergenic | 50.0% | |
| ACCAGGTTAGACTCTCTTGG+AGG | + | chr8_4:13358796-13358815 | Msa1314410:CDS | 50.0% | |
| ACCTCCAAGAGAGTCTAACC+TGG | - | chr8_4:13358800-13358819 | None:intergenic | 50.0% | |
| ! | CGACCTTTGACGCTTTTCTC+TGG | + | chr8_4:13359109-13359128 | Msa1314410:intron | 50.0% |
| GCCAAGTTCAATGCCTGTGA+AGG | + | chr8_4:13359442-13359461 | Msa1314410:CDS | 50.0% | |
| GCCTGTGAAGGTTCATCAGA+CGG | + | chr8_4:13359454-13359473 | Msa1314410:CDS | 50.0% | |
| ACCGTCTGATGAACCTTCAC+AGG | - | chr8_4:13359458-13359477 | None:intergenic | 50.0% | |
| CTGATCCAAGGCAGGAATTG+AGG | + | chr8_4:13360268-13360287 | Msa1314410:CDS | 50.0% | |
| TTAGGCCTCAATTCCTGCCT+TGG | - | chr8_4:13360276-13360295 | None:intergenic | 50.0% | |
| CTCATTCCACCCTTAGCAGT+AGG | - | chr8_4:13360348-13360367 | None:intergenic | 50.0% | |
| CTACTGCTAAGGGTGGAATG+AGG | + | chr8_4:13360346-13360365 | Msa1314410:CDS | 50.0% | |
| !! | AACTGGTTGATGGTGTGTCG+CGG | + | chr8_4:13360409-13360428 | Msa1314410:CDS | 50.0% |
| ! | GGAGGTGGTCTGAGATCAAA+CGG | + | chr8_4:13360442-13360461 | Msa1314410:CDS | 50.0% |
| TTGCTTTGCAGGACAAGTGG+AGG | + | chr8_4:13360620-13360639 | Msa1314410:intron | 50.0% | |
| TAACACACTCGTGCGTCTTC+TGG | + | chr8_4:13360748-13360767 | Msa1314410:intron | 50.0% | |
| ! | TTTGTGGGCTGCAAATCCAC+TGG | + | chr8_4:13361214-13361233 | Msa1314410:intron | 50.0% |
| GTTCGTCCCATGTTGATGTC+TGG | - | chr8_4:13361321-13361340 | None:intergenic | 50.0% | |
| ATCAACATGGGACGAACCCA+CGG | + | chr8_4:13361324-13361343 | Msa1314410:intron | 50.0% | |
| CAGATGAATTCGCGGAAGCA+TGG | + | chr8_4:13361501-13361520 | Msa1314410:intron | 50.0% | |
| GAGTATGCATGGAGACAGAG+TGG | + | chr8_4:13361647-13361666 | Msa1314410:CDS | 50.0% | |
| GTATGCATGGAGACAGAGTG+GGG | + | chr8_4:13361649-13361668 | Msa1314410:CDS | 50.0% | |
| GATGGGAAGCTTGGAGACAG+TGG | + | chr8_4:13354625-13354644 | Msa1314410:CDS | 55.0% | |
| TGGTGGAATCTCGGCTTAGC+TGG | + | chr8_4:13354895-13354914 | Msa1314410:intron | 55.0% | |
| !! | AATGTTGACGGGTTCGGGTC+GGG | + | chr8_4:13355637-13355656 | Msa1314410:intron | 55.0% |
| GCAGTAGCAGGTGAGGAAGA+AGG | - | chr8_4:13355770-13355789 | None:intergenic | 55.0% | |
| GCCGTTTCAATGGCAGTAGC+AGG | - | chr8_4:13355782-13355801 | None:intergenic | 55.0% | |
| AAGCGACGACGCCGTTTCAA+TGG | - | chr8_4:13355792-13355811 | None:intergenic | 55.0% | |
| ! | CTTCGATTGGAGTGCTCGGA+AGG | + | chr8_4:13356562-13356581 | Msa1314410:CDS | 55.0% |
| ! | AGGCACTGCAGAGGCAGATT+TGG | + | chr8_4:13357004-13357023 | Msa1314410:CDS | 55.0% |
| GGCACTGCAGAGGCAGATTT+GGG | + | chr8_4:13357005-13357024 | Msa1314410:CDS | 55.0% | |
| GCACTGCAGAGGCAGATTTG+GGG | + | chr8_4:13357006-13357025 | Msa1314410:CDS | 55.0% | |
| TATCACTCCTCCGGAAGGTC+TGG | - | chr8_4:13358140-13358159 | None:intergenic | 55.0% | |
| TGCTGCAGCTGTAACCTCTG+CGG | + | chr8_4:13358438-13358457 | Msa1314410:CDS | 55.0% | |
| CTTCGCACCCGAGTAACACA+AGG | - | chr8_4:13358838-13358857 | None:intergenic | 55.0% | |
| CGGTTGTGAAAAAGCCGCCA+TGG | - | chr8_4:13359886-13359905 | None:intergenic | 55.0% | |
| !!! | CGGCTTTTTCACAACCGCCA+TGG | + | chr8_4:13359889-13359908 | Msa1314410:intron | 55.0% |
| ! | AGCGGCGCCGTGATGTTTTA+TGG | + | chr8_4:13359928-13359947 | Msa1314410:intron | 55.0% |
| TGGCACAACTGATCCAAGGC+AGG | + | chr8_4:13360260-13360279 | Msa1314410:CDS | 55.0% | |
| TCCCTCAAGTCATGCCACAG+AGG | + | chr8_4:13360305-13360324 | Msa1314410:CDS | 55.0% | |
| CCCTCTGTGGCATGACTTGA+GGG | - | chr8_4:13360309-13360328 | None:intergenic | 55.0% | |
| CCCTCAAGTCATGCCACAGA+GGG | + | chr8_4:13360306-13360325 | Msa1314410:CDS | 55.0% | |
| CTGCTAAGGGTGGAATGAGG+AGG | + | chr8_4:13360349-13360368 | Msa1314410:CDS | 55.0% | |
| !! | GGAGGAAGCATCATCGAGCA+TGG | + | chr8_4:13360367-13360386 | Msa1314410:CDS | 55.0% |
| TCGAGCATGGACCCTTGTTG+AGG | + | chr8_4:13360380-13360399 | Msa1314410:CDS | 55.0% | |
| TTGATCTCAGACCACCTCCC+TGG | - | chr8_4:13360441-13360460 | None:intergenic | 55.0% | |
| ACTCTTACCCCCTCATCAGC+AGG | - | chr8_4:13360676-13360695 | None:intergenic | 55.0% | |
| GTGCATGCCGTGGAATGTGT+TGG | + | chr8_4:13360770-13360789 | Msa1314410:intron | 55.0% | |
| ! | AATTGGCTCAGGAATCGGGG+CGG | - | chr8_4:13361529-13361548 | None:intergenic | 55.0% |
| ACACGCTTAGTGGCAGACGC+AGG | - | chr8_4:13355851-13355870 | None:intergenic | 60.0% | |
| CAGTGTTCCAGACCTTCCGG+AGG | + | chr8_4:13358130-13358149 | Msa1314410:CDS | 60.0% | |
| GCAGGCCCGGCATAAGATGT+TGG | - | chr8_4:13358742-13358761 | None:intergenic | 60.0% | |
| CATCTTATGCCGGGCCTGCT+AGG | + | chr8_4:13358743-13358762 | Msa1314410:CDS | 60.0% | |
| GGGTGCGAAGAAGTCGTCCA+CGG | + | chr8_4:13358848-13358867 | Msa1314410:CDS | 60.0% | |
| ACGGGCGAGGCTGCAAAGTT+AGG | + | chr8_4:13359356-13359375 | Msa1314410:CDS | 60.0% | |
| GCCCTCTGTGGCATGACTTG+AGG | - | chr8_4:13360310-13360329 | None:intergenic | 60.0% | |
| !! | GTTGATGGTGTGTCGCGGTG+TGG | + | chr8_4:13360414-13360433 | Msa1314410:CDS | 60.0% |
| ! | TGCACCGACACCTGCTGATG+AGG | + | chr8_4:13360663-13360682 | Msa1314410:CDS | 60.0% |
| ! | GCACCGACACCTGCTGATGA+GGG | + | chr8_4:13360664-13360683 | Msa1314410:CDS | 60.0% |
| CACCGACACCTGCTGATGAG+GGG | + | chr8_4:13360665-13360684 | Msa1314410:CDS | 60.0% | |
| ACCGACACCTGCTGATGAGG+GGG | + | chr8_4:13360666-13360685 | Msa1314410:CDS | 60.0% | |
| ACCCCCTCATCAGCAGGTGT+CGG | - | chr8_4:13360670-13360689 | None:intergenic | 60.0% | |
| GTGTGTCGCGGTGTGGACCA+GGG | + | chr8_4:13360421-13360440 | Msa1314410:CDS | 65.0% | |
| GCGTCTTCTGGTGCATGCCG+TGG | + | chr8_4:13360760-13360779 | Msa1314410:intron | 65.0% | |
| CCTCGCCCGTGCCAGTTGGA+TGG | - | chr8_4:13359346-13359365 | None:intergenic | 70.0% | |
| CCATCCAACTGGCACGGGCG+AGG | + | chr8_4:13359343-13359362 | Msa1314410:CDS | 70.0% | |
| GGTGTGTCGCGGTGTGGACC+AGG | + | chr8_4:13360420-13360439 | Msa1314410:CDS | 70.0% | |
| TGTCGCGGTGTGGACCAGGG+AGG | + | chr8_4:13360424-13360443 | Msa1314410:CDS | 70.0% | |
| GCAGCCTCGCCCGTGCCAGT+TGG | - | chr8_4:13359350-13359369 | None:intergenic | 75.0% | |
| CGCGGTGTGGACCAGGGAGG+TGG | + | chr8_4:13360427-13360446 | Msa1314410:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 13353398 | 13361875 | 13353398 | ID=Msa1314410;Name=Msa1314410 |
| chr8_4 | mRNA | 13353398 | 13361875 | 13353398 | ID=Msa1314410-mRNA-1;Parent=Msa1314410;Name=Msa1314410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=275|1|1|1|0.87|0.77|9|195|666 |
| chr8_4 | exon | 13353398 | 13353638 | 13353398 | ID=Msa1314410-mRNA-1:exon:4964;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13354558 | 13354720 | 13354558 | ID=Msa1314410-mRNA-1:exon:4965;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13356409 | 13356583 | 13356409 | ID=Msa1314410-mRNA-1:exon:4966;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13356991 | 13357049 | 13356991 | ID=Msa1314410-mRNA-1:exon:4967;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13357923 | 13358891 | 13357923 | ID=Msa1314410-mRNA-1:exon:4968;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13359338 | 13359475 | 13359338 | ID=Msa1314410-mRNA-1:exon:4969;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13360213 | 13360509 | 13360213 | ID=Msa1314410-mRNA-1:exon:4970;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13360631 | 13360687 | 13360631 | ID=Msa1314410-mRNA-1:exon:4971;Parent=Msa1314410-mRNA-1 |
| chr8_4 | exon | 13361504 | 13361875 | 13361504 | ID=Msa1314410-mRNA-1:exon:4972;Parent=Msa1314410-mRNA-1 |
| chr8_4 | five_prime_UTR | 13353398 | 13353638 | 13353398 | ID=Msa1314410-mRNA-1:five_prime_utr;Parent=Msa1314410-mRNA-1 |
| chr8_4 | five_prime_UTR | 13354558 | 13354591 | 13354558 | ID=Msa1314410-mRNA-1:five_prime_utr;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13354592 | 13354720 | 13354592 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13356409 | 13356583 | 13356409 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13356991 | 13357049 | 13356991 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13357923 | 13358891 | 13357923 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13359338 | 13359475 | 13359338 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13360213 | 13360509 | 13360213 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13360631 | 13360687 | 13360631 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | CDS | 13361504 | 13361680 | 13361504 | ID=Msa1314410-mRNA-1:cds;Parent=Msa1314410-mRNA-1 |
| chr8_4 | three_prime_UTR | 13361681 | 13361875 | 13361681 | ID=Msa1314410-mRNA-1:three_prime_utr;Parent=Msa1314410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
