AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323210 MtrunA17_Chr8g0355961 89.161 286 7 1 1 262 20 305 2.00e-178 501
Msa1323210 MtrunA17_Chr8g0356001 85.915 284 16 1 3 262 22 305 1.39e-172 486
Msa1323210 MtrunA17_Chr1g0205371 54.851 268 95 2 17 260 30 295 7.85e-96 290
Msa1323210 MtrunA17_Chr1g0205361 54.851 268 95 2 17 260 29 294 7.00e-95 288
Msa1323210 MtrunA17_Chr2g0314721 52.560 293 107 4 1 263 18 308 1.29e-92 282
Msa1323210 MtrunA17_Chr2g0314731 51.943 283 110 3 5 263 17 297 4.46e-92 280
Msa1323210 MtrunA17_Chr5g0395321 51.119 268 111 2 11 261 31 295 3.71e-91 279
Msa1323210 MtrunA17_Chr1g0160851 52.727 275 104 2 13 263 25 297 1.22e-89 274
Msa1323210 MtrunA17_Chr5g0395331 47.464 276 117 3 13 261 28 302 8.32e-86 265
Msa1323210 MtrunA17_Chr4g0039901 50.752 266 106 2 21 262 34 298 1.74e-85 264
Msa1323210 MtrunA17_Chr1g0176831 51.103 272 108 2 16 263 57 327 3.70e-84 261
Msa1323210 MtrunA17_Chr1g0164211 50.000 268 108 2 17 260 26 291 1.76e-80 251
Msa1323210 MtrunA17_Chr5g0395381 48.819 254 113 4 11 261 31 270 2.99e-75 236
Msa1323210 MtrunA17_Chr1g0197871 45.221 272 122 3 16 263 28 296 4.05e-72 229
Msa1323210 MtrunA17_Chr1g0197891 45.055 273 123 3 15 263 27 296 1.80e-71 227
Msa1323210 MtrunA17_Chr1g0197881 43.662 284 133 3 4 263 15 295 2.32e-71 227
Msa1323210 MtrunA17_Chr1g0197851 45.055 273 123 3 15 263 27 296 3.45e-71 226
Msa1323210 MtrunA17_Chr7g0246131 40.217 276 136 4 17 263 29 304 2.57e-61 201
Msa1323210 MtrunA17_Chr7g0246221 40.351 285 141 5 7 263 20 303 6.25e-61 200
Msa1323210 MtrunA17_Chr2g0314771 62.759 145 54 0 57 201 1 145 2.01e-60 188
Msa1323210 MtrunA17_Chr7g0246181 41.077 297 141 4 1 263 6 302 1.32e-54 184
Msa1323210 MtrunA17_Chr7g0246151 40.769 260 127 3 29 261 41 300 1.93e-52 178
Msa1323210 MtrunA17_Chr7g0246121 42.146 261 120 6 29 261 41 298 6.56e-50 171
Msa1323210 MtrunA17_Chr1g0200961 37.175 269 134 5 2 242 15 276 4.23e-49 169
Msa1323210 MtrunA17_Chr1g0176851 45.000 180 74 2 108 263 1 179 1.15e-41 143
Msa1323210 MtrunA17_Chr4g0057001 32.143 280 149 6 17 263 45 316 1.25e-37 139
Msa1323210 MtrunA17_Chr6g0484811 30.375 293 170 4 1 263 16 304 3.08e-35 132
Msa1323210 MtrunA17_Chr3g0101611 41.304 138 81 0 12 149 28 165 8.20e-34 128
Msa1323210 MtrunA17_Chr5g0430101 41.463 164 93 2 2 165 19 179 2.77e-33 126
Msa1323210 MtrunA17_Chr3g0101601 42.197 173 95 3 2 169 14 186 3.88e-33 126
Msa1323210 MtrunA17_Chr8g0390881 40.940 149 88 0 13 161 27 175 4.76e-33 126
Msa1323210 MtrunA17_Chr3g0116741 30.903 288 166 7 1 263 36 315 1.47e-32 124
Msa1323210 MtrunA17_Chr4g0058281 32.234 273 155 6 1 248 29 296 3.34e-32 124
Msa1323210 MtrunA17_Chr1g0156101 35.838 173 110 1 20 191 30 202 3.45e-32 124
Msa1323210 MtrunA17_Chr3g0101631 38.889 180 106 3 1 179 16 192 4.08e-32 123
Msa1323210 MtrunA17_Chr3g0101621 40.462 173 98 3 2 169 11 183 6.12e-32 122
Msa1323210 MtrunA17_Chr1g0162801 34.254 181 116 2 1 180 16 194 1.12e-31 122
Msa1323210 MtrunA17_Chr5g0430171 40.909 154 87 3 1 153 18 168 2.59e-31 115
Msa1323210 MtrunA17_Chr1g0156081 34.921 189 118 2 20 207 54 238 3.66e-31 121
Msa1323210 MtrunA17_Chr3g0116681 27.891 294 177 6 3 269 24 309 4.02e-31 120
Msa1323210 MtrunA17_Chr5g0430091 41.558 154 86 3 1 153 18 168 5.19e-31 120
Msa1323210 MtrunA17_Chr5g0445751 37.931 174 96 4 1 169 25 191 5.84e-31 117
Msa1323210 MtrunA17_Chr7g0265611 30.980 255 139 6 21 243 45 294 5.98e-31 120
Msa1323210 MtrunA17_Chr5g0430111 40.000 145 87 0 21 165 36 180 6.05e-31 119
Msa1323210 MtrunA17_Chr1g0156061 38.012 171 102 3 15 184 48 215 2.08e-30 118
Msa1323210 MtrunA17_Chr3g0101571 41.221 131 77 0 19 149 33 163 2.71e-30 118
Msa1323210 MtrunA17_Chr4g0076161 33.155 187 112 3 21 204 36 212 7.60e-30 117
Msa1323210 MtrunA17_Chr1g0213671 31.008 258 143 8 21 246 33 287 7.74e-30 117
Msa1323210 MtrunA17_Chr7g0258221 34.328 201 127 1 1 196 8 208 8.82e-30 117
Msa1323210 MtrunA17_Chr5g0430031 40.000 155 90 2 7 161 25 176 1.16e-29 116
Msa1323210 MtrunA17_Chr2g0310391 36.686 169 106 1 2 169 8 176 1.90e-29 115
Msa1323210 MtrunA17_Chr6g0484841 35.669 157 101 0 16 172 31 187 2.18e-29 115
Msa1323210 MtrunA17_Chr8g0382901 44.138 145 77 2 2 146 475 615 5.81e-29 115
Msa1323210 MtrunA17_Chr8g0382901 38.125 160 94 1 15 174 21 175 1.86e-28 114
Msa1323210 MtrunA17_Chr5g0403351 35.165 182 97 5 1 177 14 179 6.77e-29 114
Msa1323210 MtrunA17_Chr5g0430131 40.741 135 79 1 19 153 35 168 7.82e-29 114
Msa1323210 MtrunA17_Chr1g0167321 34.444 180 115 2 1 179 13 190 1.50e-28 113
Msa1323210 MtrunA17_Chr2g0310371 42.063 126 73 0 15 140 21 146 1.52e-28 106
Msa1323210 MtrunA17_Chr5g0430081 40.940 149 86 2 3 151 18 164 1.88e-28 113
Msa1323210 MtrunA17_Chr5g0405001 37.427 171 96 4 21 189 43 204 2.22e-28 113
Msa1323210 MtrunA17_Chr3g0094231 31.707 205 134 3 17 219 30 230 2.64e-28 112
Msa1323210 MtrunA17_Chr3g0101581 29.960 247 157 7 1 241 18 254 2.72e-28 112
Msa1323210 MtrunA17_Chr2g0310381 35.714 168 108 0 15 182 21 188 4.27e-28 112
Msa1323210 MtrunA17_Chr5g0403321 34.737 190 111 4 21 207 33 212 4.95e-28 112
Msa1323210 MtrunA17_Chr3g0101651 34.270 178 114 2 20 196 36 211 5.06e-28 112
Msa1323210 MtrunA17_Chr8g0372251 26.718 262 168 6 17 257 30 288 5.30e-28 112
Msa1323210 MtrunA17_Chr5g0445421 34.500 200 123 5 1 196 91 286 2.45e-27 110
Msa1323210 MtrunA17_Chr3g0101721 37.107 159 97 2 22 179 37 193 2.86e-27 110
Msa1323210 MtrunA17_Chr4g0056951 30.233 258 150 6 34 263 56 311 3.16e-27 110
Msa1323210 MtrunA17_Chr6g0463791 34.731 167 104 3 1 164 15 179 3.82e-27 109
Msa1323210 MtrunA17_Chr5g0403331 31.518 257 135 7 21 243 34 283 4.29e-27 109
Msa1323210 MtrunA17_Chr3g0101711 32.955 176 115 2 22 196 37 210 5.49e-27 109
Msa1323210 MtrunA17_Chr5g0445461 29.670 273 167 8 1 261 17 276 1.47e-26 107
Msa1323210 MtrunA17_Chr5g0446161 41.985 131 75 1 20 149 39 169 1.67e-26 107
Msa1323210 MtrunA17_Chr1g0174461 39.597 149 88 2 16 162 28 176 1.71e-26 107
Msa1323210 MtrunA17_Chr5g0431641 29.496 278 181 9 1 270 16 286 2.05e-26 107
Msa1323210 MtrunA17_Chr3g0101691 36.782 174 97 4 22 194 38 199 2.23e-26 107
Msa1323210 MtrunA17_Chr7g0254641 28.676 272 162 6 22 261 37 308 2.76e-26 107
Msa1323210 MtrunA17_Chr5g0406651 37.415 147 91 1 4 149 12 158 2.86e-26 107
Msa1323210 MtrunA17_Chr5g0445441 28.279 244 165 5 1 238 58 297 2.92e-26 107
Msa1323210 MtrunA17_Chr8g0344151 39.200 125 76 0 22 146 36 160 3.86e-26 106
Msa1323210 MtrunA17_Chr4g0035921 26.337 243 162 4 23 259 38 269 4.83e-26 106
Msa1323210 MtrunA17_Chr8g0357431 35.849 159 99 2 22 179 37 193 5.22e-26 106
Msa1323210 MtrunA17_Chr1g0174451 37.255 153 94 2 11 162 26 177 5.90e-26 106
Msa1323210 MtrunA17_Chr3g0086661 34.091 176 111 1 29 199 39 214 1.32e-25 105
Msa1323210 MtrunA17_Chr3g0101751 35.220 159 100 2 22 179 42 198 1.40e-25 105
Msa1323210 MtrunA17_Chr3g0086651 34.091 176 111 1 29 199 39 214 1.47e-25 105
Msa1323210 MtrunA17_Chr4g0058201 38.065 155 93 1 11 165 20 171 1.57e-25 105
Msa1323210 MtrunA17_Chr3g0094171 30.601 183 126 1 18 199 36 218 1.67e-25 105
Msa1323210 MtrunA17_Chr3g0086691 34.682 173 108 1 29 196 39 211 2.15e-25 104
Msa1323210 MtrunA17_Chr4g0058191 38.562 153 86 2 1 153 12 156 2.33e-25 104
Msa1323210 MtrunA17_Chr5g0445451 35.294 153 93 3 1 149 17 167 2.41e-25 104
Msa1323210 MtrunA17_Chr5g0445411 35.294 153 93 3 1 149 24 174 4.21e-25 98.2
Msa1323210 MtrunA17_Chr3g0101821 40.800 125 73 1 22 145 35 159 4.23e-25 103
Msa1323210 MtrunA17_Chr6g0463801 40.458 131 77 1 20 149 35 165 4.31e-25 103
Msa1323210 MtrunA17_Chr5g0445531 29.630 243 148 5 22 243 38 278 4.57e-25 103
Msa1323210 MtrunA17_Chr1g0174441 35.465 172 108 2 14 182 45 216 4.78e-25 103
Msa1323210 MtrunA17_Chr3g0117321 41.176 119 70 0 20 138 5 123 4.79e-25 96.7
Msa1323210 MtrunA17_Chr8g0361471 35.333 150 96 1 1 149 13 162 7.36e-25 103
Msa1323210 MtrunA17_Chr1g0174481 33.155 187 124 1 14 199 25 211 8.99e-25 102
Msa1323210 MtrunA17_Chr4g0011861 38.406 138 84 1 13 149 20 157 9.08e-25 100
Msa1323210 MtrunA17_Chr1g0162811 33.333 153 98 2 1 149 13 165 9.12e-25 102
Msa1323210 MtrunA17_Chr3g0101701 33.333 183 111 3 22 201 38 212 9.20e-25 102
Msa1323210 MtrunA17_Chr3g0101761 38.406 138 82 2 15 149 26 163 1.17e-24 102
Msa1323210 MtrunA17_Chr4g0061381 34.270 178 108 2 29 199 38 213 1.53e-24 102
Msa1323210 MtrunA17_Chr3g0101831 30.882 204 138 2 22 224 37 238 1.53e-24 102
Msa1323210 MtrunA17_Chr5g0446151 36.429 140 88 1 8 146 27 166 1.56e-24 102
Msa1323210 MtrunA17_Chr6g0466331 35.333 150 96 1 1 149 13 162 1.75e-24 102
Msa1323210 MtrunA17_Chr5g0445381 36.601 153 91 3 1 149 48 198 2.21e-24 102
Msa1323210 MtrunA17_Chr4g0011901 38.129 139 81 2 12 149 23 157 2.21e-24 101
Msa1323210 MtrunA17_Chr6g0465511 35.333 150 96 1 1 149 13 162 2.95e-24 101
Msa1323210 MtrunA17_Chr3g0101661 31.868 182 114 3 20 200 36 208 3.85e-24 101
Msa1323210 MtrunA17_Chr4g0020041 31.111 180 117 3 3 179 18 193 3.95e-24 101
Msa1323210 MtrunA17_Chr3g0101671 34.437 151 97 2 1 149 16 166 4.78e-24 100
Msa1323210 MtrunA17_Chr2g0280261 39.394 132 79 1 15 145 27 158 5.18e-24 100
Msa1323210 MtrunA17_Chr4g0011921 25.979 281 188 7 1 268 6 279 6.45e-24 100
Msa1323210 MtrunA17_Chr4g0011881 38.281 128 78 1 23 149 31 158 6.51e-24 100
Msa1323210 MtrunA17_Chr5g0444971 52.439 82 39 0 68 149 1 82 8.51e-24 92.0
Msa1323210 MtrunA17_Chr8g0344181 39.062 128 78 0 22 149 38 165 8.72e-24 100
Msa1323210 MtrunA17_Chr4g0058231 35.673 171 104 3 1 171 12 176 1.06e-23 99.8
Msa1323210 MtrunA17_Chr4g0030701 28.333 180 129 0 17 196 30 209 2.62e-23 99.0
Msa1323210 MtrunA17_Chr8g0357421 35.000 160 101 2 22 180 37 194 2.81e-23 98.6
Msa1323210 MtrunA17_Chr6g0463611 31.361 169 109 4 1 164 27 193 3.28e-23 96.7
Msa1323210 MtrunA17_Chr4g0047631 25.000 296 190 6 1 269 28 318 4.40e-23 98.2
Msa1323210 MtrunA17_Chr1g0174421 27.239 268 168 5 22 262 47 314 4.70e-23 96.3
Msa1323210 MtrunA17_Chr4g0058261 31.088 193 127 3 6 196 48 236 5.80e-23 97.8
Msa1323210 MtrunA17_Chr4g0047691 26.117 291 180 8 1 263 32 315 6.14e-23 97.8
Msa1323210 MtrunA17_Chr5g0431671 36.641 131 80 1 22 149 38 168 1.11e-22 97.1
Msa1323210 MtrunA17_Chr4g0047661 33.987 153 97 2 1 153 31 179 1.17e-22 97.1
Msa1323210 MtrunA17_Chr3g0101811 34.591 159 101 2 22 179 37 193 1.72e-22 96.3
Msa1323210 MtrunA17_Chr3g0101731 31.068 206 135 4 22 224 36 237 1.72e-22 96.3
Msa1323210 MtrunA17_Chr7g0218601 27.306 271 184 5 7 267 17 284 2.08e-22 96.3
Msa1323210 MtrunA17_Chr4g0047641 25.914 301 183 7 1 269 30 322 2.76e-22 95.9
Msa1323210 MtrunA17_Chr5g0419691 36.232 138 87 1 13 149 20 157 2.91e-22 95.5
Msa1323210 MtrunA17_Chr1g0174471 34.810 158 100 2 5 162 36 190 3.08e-22 95.9
Msa1323210 MtrunA17_Chr3g0101801 37.162 148 88 3 2 146 22 167 3.18e-22 95.5
Msa1323210 MtrunA17_Chr4g0011871 36.232 138 87 1 13 149 20 157 6.12e-22 94.7
Msa1323210 MtrunA17_Chr5g0402971 26.786 280 171 6 12 257 30 309 1.50e-21 92.0
Msa1323210 MtrunA17_Chr1g0176861 62.121 66 25 0 15 80 30 95 2.17e-21 86.3
Msa1323210 MtrunA17_Chr5g0431631 40.179 112 61 3 22 129 50 159 2.56e-21 87.8
Msa1323210 MtrunA17_Chr4g0024771 35.878 131 78 3 23 149 39 167 3.49e-21 92.4
Msa1323210 MtrunA17_Chr7g0224561 28.986 276 159 7 19 263 28 297 5.84e-21 92.0
Msa1323210 MtrunA17_Chr8g0344191 37.600 125 78 0 22 146 69 193 8.11e-21 91.7
Msa1323210 MtrunA17_Chr4g0011961 25.781 256 179 4 15 263 22 273 2.28e-20 90.1
Msa1323210 MtrunA17_Chr1g0160861 41.481 135 49 3 155 263 8 138 2.39e-20 89.0
Msa1323210 MtrunA17_Chr7g0224551 29.391 279 157 8 16 263 28 297 2.73e-20 90.1
Msa1323210 MtrunA17_Chr4g0011931 34.667 150 95 2 1 149 10 157 2.77e-20 88.2
Msa1323210 MtrunA17_Chr6g0472311 29.139 151 107 0 1 151 20 170 3.91e-20 89.7
Msa1323210 MtrunA17_Chr7g0255531 28.205 195 124 3 16 198 22 212 7.11e-20 89.0
Msa1323210 MtrunA17_Chr4g0011981 25.573 262 183 5 15 268 22 279 7.82e-20 88.6
Msa1323210 MtrunA17_Chr5g0423601 48.000 75 39 0 111 185 7 81 1.25e-19 81.3
Msa1323210 MtrunA17_Chr4g0046331 33.929 168 102 5 2 161 9 175 1.39e-19 88.2
Msa1323210 MtrunA17_Chr3g0084921 25.431 232 166 4 2 233 18 242 1.69e-19 87.8
Msa1323210 MtrunA17_Chr4g0046351 34.194 155 98 4 10 161 22 175 2.00e-19 87.4
Msa1323210 MtrunA17_Chr5g0401681 28.223 287 175 10 1 267 8 283 2.89e-19 87.0
Msa1323210 MtrunA17_Chr5g0430051 52.273 88 39 2 2 89 21 105 3.59e-19 80.9
Msa1323210 MtrunA17_Chr7g0235551 26.562 256 160 5 21 248 32 287 5.91e-19 86.3
Msa1323210 MtrunA17_Chr4g0046321 34.194 155 98 4 10 161 22 175 8.66e-19 85.5
Msa1323210 MtrunA17_Chr7g0218611 27.273 264 180 5 13 267 23 283 1.92e-18 84.7
Msa1323210 MtrunA17_Chr2g0304871 25.822 213 135 5 13 217 28 225 4.58e-18 83.6
Msa1323210 MtrunA17_Chr4g0052881 29.496 278 176 8 1 267 16 284 4.65e-18 83.6
Msa1323210 MtrunA17_Chr5g0432751 30.370 135 93 1 21 154 32 166 5.03e-18 83.6
Msa1323210 MtrunA17_Chr5g0445541 42.391 92 49 2 2 89 16 107 1.10e-17 77.4
Msa1323210 MtrunA17_Chr1g0207841 26.068 234 169 2 13 242 26 259 2.20e-17 81.6
Msa1323210 MtrunA17_Chr6g0451751 25.347 288 170 8 1 270 20 280 4.82e-17 80.5
Msa1323210 MtrunA17_Chr4g0052851 32.967 182 117 3 16 196 27 204 5.95e-17 80.1
Msa1323210 MtrunA17_Chr5g0401691 26.744 258 169 7 21 267 50 298 8.79e-17 79.7
Msa1323210 MtrunA17_Chr8g0370651 25.949 316 172 14 1 265 20 324 1.02e-16 79.7
Msa1323210 MtrunA17_Chr6g0451681 30.370 135 91 2 18 149 56 190 1.36e-16 79.3
Msa1323210 MtrunA17_Chr2g0296651 26.690 281 192 7 2 270 9 287 2.44e-16 78.6
Msa1323210 MtrunA17_Chr1g0207851 26.496 234 167 3 13 242 26 258 2.56e-16 77.8
Msa1323210 MtrunA17_Chr6g0451641 31.429 140 92 3 2 138 18 156 3.16e-16 78.2
Msa1323210 MtrunA17_Chr4g0052861 25.714 280 189 7 1 270 16 286 4.04e-16 77.8
Msa1323210 MtrunA17_Chr6g0466941 33.094 139 91 1 7 143 19 157 4.07e-16 77.8
Msa1323210 MtrunA17_Chr6g0451691 30.000 150 99 3 4 147 23 172 1.62e-15 76.3
Msa1323210 MtrunA17_Chr4g0030711 21.933 269 176 3 29 263 44 312 2.03e-15 75.9
Msa1323210 MtrunA17_Chr4g0008101 25.794 252 168 8 8 241 25 275 2.21e-15 75.5
Msa1323210 MtrunA17_Chr4g0030741 30.000 190 126 3 3 191 44 227 2.93e-15 74.7
Msa1323210 MtrunA17_Chr8g0362701 28.030 264 161 6 29 263 42 305 3.33e-15 75.1
Msa1323210 MtrunA17_Chr4g0017411 31.892 185 115 5 16 196 24 201 3.52e-15 75.1
Msa1323210 MtrunA17_Chr5g0431501 29.012 162 114 1 22 182 33 194 4.71e-15 74.7
Msa1323210 MtrunA17_Chr5g0431461 29.012 162 114 1 22 182 33 194 4.71e-15 74.7
Msa1323210 MtrunA17_Chr4g0053621 29.187 209 127 8 2 196 15 216 5.29e-15 74.3
Msa1323210 MtrunA17_Chr8g0370641 25.000 296 164 13 1 249 18 302 6.76e-15 74.3
Msa1323210 MtrunA17_Chr6g0484771 30.556 108 75 0 57 164 1 108 1.20e-14 69.3
Msa1323210 MtrunA17_Chr5g0431511 26.131 199 143 2 22 219 33 228 1.28e-14 73.2
Msa1323210 MtrunA17_Chr8g0362481 28.390 236 140 7 57 263 1 236 2.17e-14 72.4
Msa1323210 MtrunA17_Chr6g0451781 25.203 246 166 7 13 241 64 308 3.68e-14 72.0
Msa1323210 MtrunA17_Chr4g0046691 27.536 138 98 1 13 148 30 167 7.08e-14 70.5
Msa1323210 MtrunA17_Chr3g0101741 37.634 93 58 0 57 149 1 93 8.67e-14 70.9
Msa1323210 MtrunA17_Chr6g0466901 32.231 121 79 2 15 132 26 146 1.55e-13 70.1
Msa1323210 MtrunA17_Chr1g0198191 27.160 162 111 4 4 161 30 188 1.58e-13 70.1
Msa1323210 MtrunA17_Chr6g0451741 30.000 130 86 2 19 143 54 183 2.16e-13 69.7
Msa1323210 MtrunA17_Chr7g0258211 37.500 168 95 5 1 162 16 179 2.48e-13 69.7
Msa1323210 MtrunA17_Chr6g0451801 25.658 152 106 3 3 147 19 170 4.01e-13 68.2
Msa1323210 MtrunA17_Chr8g0339311 23.723 274 175 7 17 256 39 312 6.20e-13 68.6
Msa1323210 MtrunA17_Chr4g0046631 31.034 116 77 2 20 132 43 158 1.13e-12 67.8
Msa1323210 MtrunA17_Chr3g0107561 26.286 175 122 3 21 190 44 216 2.51e-12 65.9
Msa1323210 MtrunA17_Chr4g0046671 29.464 112 77 1 23 132 45 156 2.55e-12 65.9
Msa1323210 MtrunA17_Chr8g0339331 29.371 143 95 3 10 149 29 168 3.38e-12 66.2
Msa1323210 MtrunA17_Chr1g0210091 28.108 185 126 5 3 182 45 227 3.80e-12 65.9
Msa1323210 MtrunA17_Chr3g0105751 28.906 128 80 2 20 144 45 164 5.81e-12 65.1
Msa1323210 MtrunA17_Chr2g0280071 30.061 163 110 2 3 161 44 206 6.39e-12 65.5
Msa1323210 MtrunA17_Chr3g0082701 28.571 140 96 3 1 138 20 157 8.79e-12 65.1
Msa1323210 MtrunA17_Chr2g0280001 31.915 141 88 3 22 156 63 201 1.93e-11 62.0
Msa1323210 MtrunA17_Chr2g0334021 28.788 132 87 3 21 149 32 159 2.13e-11 63.9
Msa1323210 MtrunA17_Chr5g0445341 35.632 87 51 3 57 140 1 85 3.90e-11 58.2
Msa1323210 MtrunA17_Chr4g0076181 40.000 70 42 0 57 126 1 70 4.17e-11 60.1
Msa1323210 MtrunA17_Chr3g0107611 28.829 111 76 2 20 127 48 158 8.80e-11 62.0
Msa1323210 MtrunA17_Chr8g0377341 24.345 267 166 10 7 243 51 311 9.58e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323210 AT3G61040.2 36.296 270 141 4 20 263 31 295 7.66e-52 174
Msa1323210 AT1G33720.1 36.131 274 143 6 20 263 36 307 1.46e-50 173
Msa1323210 AT3G61040.1 36.296 270 141 4 20 263 31 295 1.91e-50 173
Msa1323210 AT2G45550.1 33.220 295 164 7 7 269 20 313 9.22e-49 169
Msa1323210 AT2G45560.3 44.324 185 99 2 2 182 15 199 3.31e-47 157
Msa1323210 AT2G45560.2 33.677 291 158 6 2 259 15 303 8.25e-47 159
Msa1323210 AT2G45560.1 33.887 301 164 6 2 269 15 313 8.44e-47 163
Msa1323210 AT2G45580.3 34.586 266 142 4 29 263 45 309 2.20e-45 157
Msa1323210 AT2G45580.1 34.586 266 142 4 29 263 45 309 1.83e-44 157
Msa1323210 AT2G45570.1 33.962 265 144 6 29 263 45 308 5.99e-43 153
Msa1323210 AT3G52970.1 33.206 262 147 7 15 248 29 290 3.72e-36 135
Msa1323210 AT3G52970.2 32.246 276 145 7 15 248 29 304 9.65e-36 134
Msa1323210 AT5G57260.1 30.978 184 127 0 13 196 21 204 1.92e-31 122
Msa1323210 AT3G26300.1 31.351 185 127 0 12 196 21 205 6.28e-31 120
Msa1323210 AT4G12300.1 34.008 247 156 5 19 261 39 282 1.39e-30 119
Msa1323210 AT5G25130.1 33.702 181 119 1 16 196 23 202 1.13e-28 114
Msa1323210 AT4G13770.1 28.195 266 179 5 3 262 14 273 2.00e-28 113
Msa1323210 AT5G07990.1 31.250 192 125 2 2 188 13 202 4.47e-28 112
Msa1323210 AT5G25120.1 29.197 274 169 5 13 262 20 292 5.11e-28 112
Msa1323210 AT4G12320.1 30.469 256 165 6 22 267 42 294 1.38e-27 111
Msa1323210 AT3G26310.1 30.978 184 122 1 18 196 21 204 1.42e-27 111
Msa1323210 AT3G26280.2 33.708 178 118 0 5 182 32 209 2.44e-27 110
Msa1323210 AT3G26280.1 33.708 178 118 0 5 182 15 192 2.69e-27 110
Msa1323210 AT3G26190.1 33.129 163 109 0 20 182 26 188 6.84e-27 109
Msa1323210 AT3G26320.1 30.256 195 132 2 2 196 15 205 9.15e-27 108
Msa1323210 AT3G48320.1 35.417 144 93 0 13 156 23 166 1.55e-26 108
Msa1323210 AT5G42590.1 28.671 286 174 7 1 263 17 295 2.55e-26 107
Msa1323210 AT5G25140.1 29.893 281 160 10 13 263 20 293 2.63e-26 107
Msa1323210 AT3G26330.1 30.723 166 115 0 17 182 26 191 2.83e-26 107
Msa1323210 AT3G26290.1 30.601 183 125 1 16 196 23 205 1.97e-25 105
Msa1323210 AT3G26290.2 30.601 183 125 1 16 196 36 218 2.12e-25 105
Msa1323210 AT3G53300.1 35.802 162 104 0 21 182 27 188 4.51e-25 103
Msa1323210 AT3G26200.1 34.356 163 107 0 20 182 26 188 5.43e-25 103
Msa1323210 AT3G48270.1 36.719 128 81 0 24 151 33 160 7.35e-25 103
Msa1323210 AT4G31500.1 30.811 185 127 1 13 196 20 204 7.59e-25 103
Msa1323210 AT5G25180.1 28.352 261 177 5 12 269 22 275 7.93e-25 103
Msa1323210 AT3G44250.1 35.758 165 104 1 20 182 26 190 1.88e-24 102
Msa1323210 AT3G48310.1 31.944 144 98 0 13 156 23 166 5.84e-24 100
Msa1323210 AT3G53280.1 34.731 167 105 2 20 183 26 191 6.30e-24 100
Msa1323210 AT3G48290.2 34.266 143 94 0 13 155 24 166 9.64e-24 100
Msa1323210 AT3G48290.1 34.266 143 94 0 13 155 24 166 9.78e-24 100
Msa1323210 AT5G44620.1 28.261 230 157 3 29 255 53 277 1.52e-23 99.8
Msa1323210 AT5G06900.1 29.439 214 145 2 1 214 13 220 1.57e-23 99.8
Msa1323210 AT3G26270.1 31.319 182 122 1 13 191 23 204 1.97e-23 99.4
Msa1323210 AT2G24180.1 37.143 140 88 0 22 161 36 175 2.08e-23 99.4
Msa1323210 AT2G02580.1 33.702 181 116 1 2 182 15 191 2.14e-23 99.4
Msa1323210 AT3G48280.1 36.029 136 87 0 20 155 28 163 2.79e-23 99.0
Msa1323210 AT4G13310.2 32.298 161 105 3 13 171 24 182 1.43e-22 96.3
Msa1323210 AT4G37410.1 28.467 274 169 8 1 261 13 272 2.04e-22 96.7
Msa1323210 AT4G13310.1 32.298 161 105 3 13 171 24 182 3.79e-22 95.9
Msa1323210 AT1G11610.1 27.551 196 130 2 22 217 33 216 8.42e-22 94.7
Msa1323210 AT1G11610.2 27.551 196 130 2 22 217 33 216 8.54e-22 94.7
Msa1323210 AT2G30770.1 35.878 131 84 0 22 152 33 163 9.36e-22 94.7
Msa1323210 AT5G24960.2 31.818 132 90 0 22 153 33 164 1.65e-21 93.2
Msa1323210 AT3G26170.1 30.688 189 124 2 2 183 8 196 1.69e-21 94.0
Msa1323210 AT2G30750.1 37.209 129 81 0 18 146 29 157 1.85e-21 94.0
Msa1323210 AT4G12330.1 27.037 270 165 5 29 269 53 319 1.91e-21 94.0
Msa1323210 AT5G24960.1 31.818 132 90 0 22 153 33 164 2.83e-21 93.2
Msa1323210 AT4G36220.1 30.909 165 102 3 29 191 47 201 3.10e-21 93.2
Msa1323210 AT5G04330.1 42.342 111 64 0 23 133 33 143 3.34e-21 93.2
Msa1323210 AT4G13290.1 27.143 210 135 4 13 220 24 217 1.02e-20 91.7
Msa1323210 AT5G24950.1 28.652 178 123 2 12 189 24 197 1.52e-20 91.3
Msa1323210 AT2G40890.1 29.231 195 128 4 11 196 16 209 1.53e-20 91.3
Msa1323210 AT4G20240.2 27.647 170 121 1 21 190 32 199 5.87e-20 89.0
Msa1323210 AT1G01280.1 31.176 170 112 1 31 195 41 210 8.45e-20 89.0
Msa1323210 AT3G26210.1 34.591 159 103 1 29 187 38 195 8.67e-20 89.0
Msa1323210 AT1G13110.1 33.333 174 109 4 21 191 31 200 1.04e-19 88.6
Msa1323210 AT4G20240.1 27.647 170 121 1 21 190 32 199 1.06e-19 88.6
Msa1323210 AT4G22690.1 26.897 290 184 5 1 263 63 351 1.79e-19 88.2
Msa1323210 AT3G48300.1 34.615 130 85 0 24 153 31 160 2.09e-19 87.8
Msa1323210 AT3G48300.2 34.615 130 85 0 24 153 33 162 2.10e-19 87.8
Msa1323210 AT1G13090.1 29.249 253 142 6 21 243 27 272 2.26e-19 85.9
Msa1323210 AT4G12310.1 30.120 249 161 5 29 267 51 296 2.29e-19 87.8
Msa1323210 AT3G26180.1 29.940 167 112 1 22 183 30 196 2.78e-19 87.4
Msa1323210 AT5G57220.1 26.087 276 189 7 1 270 13 279 4.92e-19 86.7
Msa1323210 AT1G13090.2 29.249 253 142 6 21 243 27 272 6.47e-19 86.3
Msa1323210 AT1G74540.1 30.435 184 116 4 20 196 25 203 7.23e-19 86.3
Msa1323210 AT1G13080.1 30.460 174 121 0 13 186 22 195 1.64e-18 85.1
Msa1323210 AT3G26160.1 30.723 166 114 1 22 187 30 194 3.43e-18 84.3
Msa1323210 AT4G22710.1 24.615 260 168 5 31 263 62 320 4.60e-18 84.0
Msa1323210 AT3G26220.1 31.016 187 119 2 2 182 3 185 5.98e-18 83.6
Msa1323210 AT5G06905.1 28.889 180 124 2 22 199 31 208 1.31e-17 82.8
Msa1323210 AT4G37430.1 24.823 282 193 6 1 270 10 284 1.40e-17 82.4
Msa1323210 AT1G33720.4 30.114 176 92 5 117 263 2 175 3.20e-17 80.9
Msa1323210 AT1G33720.3 30.114 176 92 5 117 263 2 175 3.20e-17 80.9
Msa1323210 AT1G33720.5 30.114 176 92 5 117 263 2 175 3.20e-17 80.9
Msa1323210 AT2G23190.1 28.261 276 174 10 7 266 58 325 1.53e-16 79.3
Msa1323210 AT3G26150.1 30.120 166 114 1 19 182 25 190 1.69e-16 79.3
Msa1323210 AT5G10610.1 31.447 159 106 2 4 161 16 172 1.86e-16 79.3
Msa1323210 AT3G26230.1 29.670 182 123 2 8 189 13 189 1.93e-16 79.3
Msa1323210 AT3G10560.1 30.556 144 96 2 11 150 35 178 3.28e-16 78.6
Msa1323210 AT5G10600.1 29.412 153 100 2 2 153 33 178 1.12e-15 77.0
Msa1323210 AT4G37320.1 28.704 216 131 8 2 199 6 216 1.79e-15 76.3
Msa1323210 AT3G20140.1 28.272 191 132 3 22 211 42 228 2.84e-15 75.9
Msa1323210 AT4G31970.1 31.538 130 85 2 24 149 33 162 2.91e-15 75.9
Msa1323210 AT2G25160.2 30.709 127 87 1 15 141 29 154 1.52e-14 73.6
Msa1323210 AT1G33720.2 28.655 171 91 5 117 258 2 170 1.99e-14 72.8
Msa1323210 AT1G33730.1 31.765 170 83 6 124 263 5 171 2.45e-14 72.4
Msa1323210 AT1G33730.2 31.765 170 83 6 124 263 5 171 2.45e-14 72.4
Msa1323210 AT2G25160.1 30.709 127 87 1 15 141 29 154 2.97e-14 72.8
Msa1323210 AT1G74110.1 31.034 174 107 6 24 187 65 235 3.71e-14 72.4
Msa1323210 AT5G04630.1 30.247 162 105 5 1 157 17 175 4.77e-14 72.0
Msa1323210 AT3G61035.1 24.345 267 146 7 31 261 51 297 7.92e-14 70.9
Msa1323210 AT4G31940.1 31.298 131 83 3 24 150 33 160 8.40e-14 71.2
Msa1323210 AT3G26830.1 28.324 173 114 1 21 183 27 199 9.47e-14 71.2
Msa1323210 AT5G25900.1 33.333 144 88 4 6 146 25 163 9.69e-14 71.2
Msa1323210 AT4G37400.1 27.126 247 159 8 34 270 45 280 1.16e-13 70.9
Msa1323210 AT1G74550.1 28.358 134 93 1 16 149 21 151 2.73e-13 69.7
Msa1323210 AT3G26180.2 47.059 68 36 0 22 89 30 97 5.89e-13 68.6
Msa1323210 AT3G20940.1 24.859 177 132 1 22 197 42 218 9.24e-13 68.2
Msa1323210 AT4G20235.1 26.846 149 105 1 2 146 11 159 1.37e-12 67.4
Msa1323210 AT5G42580.1 26.667 225 145 6 42 261 60 269 1.38e-12 67.8
Msa1323210 AT4G15360.1 28.070 171 119 2 22 191 40 207 1.45e-12 67.8
Msa1323210 AT1G58260.1 28.800 125 86 2 17 138 32 156 1.45e-12 67.8
Msa1323210 AT3G20110.1 26.901 171 121 2 26 195 43 210 2.33e-12 67.0
Msa1323210 AT4G37360.1 26.455 189 131 3 17 197 25 213 2.39e-12 67.0
Msa1323210 AT4G37310.1 27.046 281 182 9 2 267 14 286 5.55e-12 65.9
Msa1323210 AT2G42250.1 25.258 194 144 1 20 212 39 232 6.24e-12 65.9
Msa1323210 AT3G20080.2 29.861 144 100 1 19 161 39 182 6.35e-12 65.9
Msa1323210 AT3G20080.1 29.861 144 100 1 19 161 39 182 6.35e-12 65.9
Msa1323210 AT3G20090.2 27.232 224 152 6 43 263 65 280 1.83e-11 64.3
Msa1323210 AT2G14100.1 23.922 255 163 7 36 263 58 308 3.07e-11 63.5

Find 48 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAACTTTAGTGTCATTAT+TGG 0.169227 8_4:-31410137 None:intergenic
TGCTTTGCTCAATATTTCTT+TGG 0.240928 8_4:+31410759 Msa1323210:CDS
CAACAAACCACATCATTCTT+TGG 0.304932 8_4:+31410091 Msa1323210:CDS
CTCAATATTTCTTTGGATGA+TGG 0.313033 8_4:+31410766 Msa1323210:CDS
CCTTCACCACTTCCCATAAT+AGG 0.315418 8_4:+31410050 Msa1323210:CDS
TGAGGAAGCTGGAGAGTATA+AGG 0.327149 8_4:+31410532 Msa1323210:CDS
ATTGAGGAAGCTGTCGATAT+TGG 0.328720 8_4:+31410437 Msa1323210:CDS
TTTAGAAGGTTTCCTATTAT+GGG 0.350863 8_4:-31410062 None:intergenic
TGAGATTGAACATTTATTGC+TGG 0.365311 8_4:+31410810 Msa1323210:CDS
TTGATTTGCAAGGTATTAGA+AGG 0.384222 8_4:+31410626 Msa1323210:intron
TTCTGTTGTTTCTGTTAAGA+AGG 0.409008 8_4:+31410651 Msa1323210:CDS
ATTTCCTCCGCCTTAGCGCC+TGG 0.409571 8_4:-31410376 None:intergenic
TTGGAATAAGAAATTTGATA+AGG 0.412020 8_4:-31409983 None:intergenic
GCAAACCTTTCAAACATTCA+TGG 0.421133 8_4:+31410113 Msa1323210:CDS
ATATTACAATGGTTGTTACT+TGG 0.426915 8_4:-31410160 None:intergenic
CGGGGAAAGGTTGAAGTTGA+GGG 0.429430 8_4:+31410699 Msa1323210:CDS
GTGCATTCTGCTGAGGAAGC+TGG 0.441323 8_4:+31410521 Msa1323210:CDS
TTGAGAACGGAGAGTGCGTC+CGG 0.442483 8_4:-31410248 None:intergenic
GACAGTCCGGTTTGATAGTA+AGG 0.452463 8_4:-31410225 None:intergenic
CCAATAATGACACTAAAGTT+AGG 0.454027 8_4:+31410137 Msa1323210:CDS
CAAAACTCTCGATTCGAGCC+AGG 0.472222 8_4:+31410358 Msa1323210:CDS
ATGACACCTTACTATCAAAC+CGG 0.483523 8_4:+31410219 Msa1323210:CDS
TCAATATTTCTTTGGATGAT+GGG 0.486545 8_4:+31410767 Msa1323210:CDS
TCGGGGAAAGGTTGAAGTTG+AGG 0.487992 8_4:+31410698 Msa1323210:CDS
TTCTAAGGTCGCGCCAACGT+GGG 0.495834 8_4:-31410307 None:intergenic
AGGTTTCCTATTATGGGAAG+TGG 0.497065 8_4:-31410056 None:intergenic
CCTATTATGGGAAGTGGTGA+AGG 0.502440 8_4:-31410050 None:intergenic
TCAGGAGATTTGTCGGGGAA+AGG 0.503282 8_4:+31410686 Msa1323210:CDS
ACTATCAAACCGGACTGTCC+CGG 0.506426 8_4:+31410229 Msa1323210:CDS
ATGACAAACTATATTGATCA+TGG 0.517657 8_4:-31410271 None:intergenic
TTGGACCATGAATGTTTGAA+AGG 0.525243 8_4:-31410118 None:intergenic
CGAGCCAGGCGCTAAGGCGG+AGG 0.525791 8_4:+31410372 Msa1323210:CDS
TTGAAGTTGAGGGAAGGTAC+TGG 0.535651 8_4:+31410709 Msa1323210:CDS
TCGATTCGAGCCAGGCGCTA+AGG 0.540543 8_4:+31410366 Msa1323210:CDS
ATAGGAAACCTTCTAAAACT+AGG 0.559794 8_4:+31410068 Msa1323210:CDS
ATTCGAGCCAGGCGCTAAGG+CGG 0.592663 8_4:+31410369 Msa1323210:CDS
GGATGATGGGAAGATTGAGA+TGG 0.601070 8_4:+31410780 Msa1323210:CDS
TGAGAACGGAGAGTGCGTCC+GGG 0.601676 8_4:-31410247 None:intergenic
ATGGGAAGTGGTGAAGGACC+TGG 0.607341 8_4:-31410044 None:intergenic
TTTCTAAGGTCGCGCCAACG+TGG 0.615481 8_4:-31410308 None:intergenic
GACCTGGTGGAAGCTTAGAG+TGG 0.623315 8_4:-31410028 None:intergenic
AACCACTCTAAGCTTCCACC+AGG 0.628416 8_4:+31410026 Msa1323210:CDS
ATATTGATCATGGTTGAGAA+CGG 0.628833 8_4:-31410261 None:intergenic
AGGTTTGCCAAAGAATGATG+TGG 0.657933 8_4:-31410098 None:intergenic
TTATGCGTGTTTCCCCACGT+TGG 0.667233 8_4:+31410294 Msa1323210:CDS
GTCTGCTGAGGATATTACAA+TGG 0.672046 8_4:-31410171 None:intergenic
GAAAGGTTGAAGTTGAGGGA+AGG 0.676334 8_4:+31410703 Msa1323210:CDS
GGAAGTGGTGAAGGACCTGG+TGG 0.703923 8_4:-31410041 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTTAAATATTAATAAT+TGG + chr8_4:31411655-31411674 Msa1323210:intron 0.0%
!! TATATTTAAATATTAATAAT+TGG + chr8_4:31411655-31411674 Msa1323210:intron 0.0%
!!! TTTTGAATTAATATCTAATT+TGG - chr8_4:31411704-31411723 None:intergenic 10.0%
!!! TTTTGAATTAATATCTAATT+TGG - chr8_4:31411704-31411723 None:intergenic 10.0%
!! TTAAAAAACTTAAATAGAGA+AGG - chr8_4:31410852-31410871 None:intergenic 15.0%
!!! AAGTCAAAAAGTTTTTTTTA+TGG - chr8_4:31410983-31411002 None:intergenic 15.0%
!!! ACAATATAACTTTTTTTTAG+TGG + chr8_4:31411213-31411232 Msa1323210:intron 15.0%
!! TCTCAAAATTAAAACTTTAA+GGG - chr8_4:31411508-31411527 None:intergenic 15.0%
!! CTTTCAAAAAAAAAAACTAT+GGG - chr8_4:31411606-31411625 None:intergenic 15.0%
!! TCTTTCAAAAAAAAAAACTA+TGG - chr8_4:31411607-31411626 None:intergenic 15.0%
!!! AACTTTGTACTAAATAATTT+TGG + chr8_4:31411736-31411755 Msa1323210:intron 15.0%
!!! ACTTTGTACTAAATAATTTT+GGG + chr8_4:31411737-31411756 Msa1323210:intron 15.0%
!! TTAAAAAACTTAAATAGAGA+AGG - chr8_4:31410852-31410871 None:intergenic 15.0%
!!! AAGTCAAAAAGTTTTTTTTA+TGG - chr8_4:31410983-31411002 None:intergenic 15.0%
!!! ACAATATAACTTTTTTTTAG+TGG + chr8_4:31411213-31411232 Msa1323210:intron 15.0%
!! TCTCAAAATTAAAACTTTAA+GGG - chr8_4:31411508-31411527 None:intergenic 15.0%
!! CTTTCAAAAAAAAAAACTAT+GGG - chr8_4:31411606-31411625 None:intergenic 15.0%
!! TCTTTCAAAAAAAAAAACTA+TGG - chr8_4:31411607-31411626 None:intergenic 15.0%
!!! AACTTTGTACTAAATAATTT+TGG + chr8_4:31411736-31411755 Msa1323210:intron 15.0%
!!! ACTTTGTACTAAATAATTTT+GGG + chr8_4:31411737-31411756 Msa1323210:intron 15.0%
!! TTGGAATAAGAAATTTGATA+AGG - chr8_4:31409986-31410005 None:intergenic 20.0%
!!! TGTGATTTTAAAAATGGTTA+TGG - chr8_4:31411163-31411182 None:intergenic 20.0%
!!! AATTTTTAAGTACTAGTCTA+TGG - chr8_4:31411288-31411307 None:intergenic 20.0%
!! CTCTCAAAATTAAAACTTTA+AGG - chr8_4:31411509-31411528 None:intergenic 20.0%
!!! TGAATTTAAGTATTGATTCA+AGG + chr8_4:31411561-31411580 Msa1323210:intron 20.0%
!! TTGGAATAAGAAATTTGATA+AGG - chr8_4:31409986-31410005 None:intergenic 20.0%
!!! TGTGATTTTAAAAATGGTTA+TGG - chr8_4:31411163-31411182 None:intergenic 20.0%
!!! AATTTTTAAGTACTAGTCTA+TGG - chr8_4:31411288-31411307 None:intergenic 20.0%
!! CTCTCAAAATTAAAACTTTA+AGG - chr8_4:31411509-31411528 None:intergenic 20.0%
!!! TGAATTTAAGTATTGATTCA+AGG + chr8_4:31411561-31411580 Msa1323210:intron 20.0%
! TTTAGAAGGTTTCCTATTAT+GGG - chr8_4:31410065-31410084 None:intergenic 25.0%
!!! TTTTAGAAGGTTTCCTATTA+TGG - chr8_4:31410066-31410085 None:intergenic 25.0%
! ATATTACAATGGTTGTTACT+TGG - chr8_4:31410163-31410182 None:intergenic 25.0%
! ATGACAAACTATATTGATCA+TGG - chr8_4:31410274-31410293 None:intergenic 25.0%
!! GGTTATTGCAAATTTTTCTA+AGG - chr8_4:31410325-31410344 None:intergenic 25.0%
! TCAATATTTCTTTGGATGAT+GGG + chr8_4:31410767-31410786 Msa1323210:CDS 25.0%
!!! ATGGTAATAACTTCCTTTTT+TGG - chr8_4:31410964-31410983 None:intergenic 25.0%
! CAGTGATTAATGATACTAAA+AGG - chr8_4:31411052-31411071 None:intergenic 25.0%
!!! CTCATGTGTGATTTTAAAAA+TGG - chr8_4:31411169-31411188 None:intergenic 25.0%
!!! TTTTTAAAATCACACATGAG+TGG + chr8_4:31411169-31411188 Msa1323210:intron 25.0%
! TGAATCCCTAATATATTTAG+CGG + chr8_4:31411249-31411268 Msa1323210:intron 25.0%
!!! AGTTTTGATGAACACATATT+TGG + chr8_4:31411426-31411445 Msa1323210:intron 25.0%
!!! GGTTTTTTCAAATTACATCT+AGG + chr8_4:31411456-31411475 Msa1323210:intron 25.0%
! ATATATGCAAGTTCAACTAT+GGG - chr8_4:31411640-31411659 None:intergenic 25.0%
! AATATATGCAAGTTCAACTA+TGG - chr8_4:31411641-31411660 None:intergenic 25.0%
! TTTAGAAGGTTTCCTATTAT+GGG - chr8_4:31410065-31410084 None:intergenic 25.0%
!!! TTTTAGAAGGTTTCCTATTA+TGG - chr8_4:31410066-31410085 None:intergenic 25.0%
! ATATTACAATGGTTGTTACT+TGG - chr8_4:31410163-31410182 None:intergenic 25.0%
! ATGACAAACTATATTGATCA+TGG - chr8_4:31410274-31410293 None:intergenic 25.0%
!! GGTTATTGCAAATTTTTCTA+AGG - chr8_4:31410325-31410344 None:intergenic 25.0%
! TCAATATTTCTTTGGATGAT+GGG + chr8_4:31410767-31410786 Msa1323210:CDS 25.0%
!!! ATGGTAATAACTTCCTTTTT+TGG - chr8_4:31410964-31410983 None:intergenic 25.0%
! CAGTGATTAATGATACTAAA+AGG - chr8_4:31411052-31411071 None:intergenic 25.0%
!!! CTCATGTGTGATTTTAAAAA+TGG - chr8_4:31411169-31411188 None:intergenic 25.0%
!!! TTTTTAAAATCACACATGAG+TGG + chr8_4:31411169-31411188 Msa1323210:intron 25.0%
! TGAATCCCTAATATATTTAG+CGG + chr8_4:31411249-31411268 Msa1323210:intron 25.0%
!!! AGTTTTGATGAACACATATT+TGG + chr8_4:31411426-31411445 Msa1323210:intron 25.0%
!!! GGTTTTTTCAAATTACATCT+AGG + chr8_4:31411456-31411475 Msa1323210:intron 25.0%
! ATATATGCAAGTTCAACTAT+GGG - chr8_4:31411640-31411659 None:intergenic 25.0%
! AATATATGCAAGTTCAACTA+TGG - chr8_4:31411641-31411660 None:intergenic 25.0%
!!! TTTTGGTTGGTTTTGTTTGT+TGG - chr8_4:31410005-31410024 None:intergenic 30.0%
!! ATAGGAAACCTTCTAAAACT+AGG + chr8_4:31410068-31410087 Msa1323210:CDS 30.0%
! CCTAACTTTAGTGTCATTAT+TGG - chr8_4:31410140-31410159 None:intergenic 30.0%
CCAATAATGACACTAAAGTT+AGG + chr8_4:31410137-31410156 Msa1323210:CDS 30.0%
ATATTGATCATGGTTGAGAA+CGG - chr8_4:31410264-31410283 None:intergenic 30.0%
!!! GAGTTTTGTTTGAAAACAAC+TGG - chr8_4:31410346-31410365 None:intergenic 30.0%
! ACTTTTTGATGTCATCTAAG+AGG - chr8_4:31410409-31410428 None:intergenic 30.0%
!!! GTTGTCGAATACTTTTTTCT+CGG + chr8_4:31410490-31410509 Msa1323210:CDS 30.0%
GATTGTTGTGAGTATATTGA+AGG + chr8_4:31410556-31410575 Msa1323210:intron 30.0%
AGGAAAAAATCCGACAAATT+CGG - chr8_4:31410593-31410612 None:intergenic 30.0%
AAATCAAAAACCGTCAACAT+AGG - chr8_4:31410613-31410632 None:intergenic 30.0%
!! TTGATTTGCAAGGTATTAGA+AGG + chr8_4:31410626-31410645 Msa1323210:intron 30.0%
!! TTCTGTTGTTTCTGTTAAGA+AGG + chr8_4:31410651-31410670 Msa1323210:CDS 30.0%
!!! AGAAGGTTTTGAGTATTTTC+AGG + chr8_4:31410668-31410687 Msa1323210:CDS 30.0%
!! AGTATTTTCAGGAGATTTGT+CGG + chr8_4:31410679-31410698 Msa1323210:CDS 30.0%
TGCTTTGCTCAATATTTCTT+TGG + chr8_4:31410759-31410778 Msa1323210:CDS 30.0%
CTCAATATTTCTTTGGATGA+TGG + chr8_4:31410766-31410785 Msa1323210:CDS 30.0%
TGAGATTGAACATTTATTGC+TGG + chr8_4:31410810-31410829 Msa1323210:CDS 30.0%
AATTTATGGGTCATGTTAAC+CGG + chr8_4:31410913-31410932 Msa1323210:intron 30.0%
CTGGTTAAAGATACCAAAAA+AGG + chr8_4:31410948-31410967 Msa1323210:intron 30.0%
ATATTAAGGGAAATGCTAAC+CGG - chr8_4:31411086-31411105 None:intergenic 30.0%
GCACGGTGTATATATATTAA+GGG - chr8_4:31411099-31411118 None:intergenic 30.0%
TGCACGGTGTATATATATTA+AGG - chr8_4:31411100-31411119 None:intergenic 30.0%
CAAATATTTCAGTGATCTTG+TGG - chr8_4:31411133-31411152 None:intergenic 30.0%
GTCTACCGCTAAATATATTA+GGG - chr8_4:31411257-31411276 None:intergenic 30.0%
!! TTTTAAGTACTAGTCTATGG+TGG - chr8_4:31411285-31411304 None:intergenic 30.0%
TCGCATTTGTTTGTAACAAA+CGG - chr8_4:31411402-31411421 None:intergenic 30.0%
!! GAACACATATTTGGTTTGAT+TGG + chr8_4:31411435-31411454 Msa1323210:intron 30.0%
! AAAACTATGGGCATTTTGAA+AGG - chr8_4:31411594-31411613 None:intergenic 30.0%
!!! TTTTGGTTGGTTTTGTTTGT+TGG - chr8_4:31410005-31410024 None:intergenic 30.0%
!! ATAGGAAACCTTCTAAAACT+AGG + chr8_4:31410068-31410087 Msa1323210:CDS 30.0%
! CCTAACTTTAGTGTCATTAT+TGG - chr8_4:31410140-31410159 None:intergenic 30.0%
CCAATAATGACACTAAAGTT+AGG + chr8_4:31410137-31410156 Msa1323210:CDS 30.0%
ATATTGATCATGGTTGAGAA+CGG - chr8_4:31410264-31410283 None:intergenic 30.0%
!!! GAGTTTTGTTTGAAAACAAC+TGG - chr8_4:31410346-31410365 None:intergenic 30.0%
! ACTTTTTGATGTCATCTAAG+AGG - chr8_4:31410409-31410428 None:intergenic 30.0%
!!! GTTGTCGAATACTTTTTTCT+CGG + chr8_4:31410490-31410509 Msa1323210:CDS 30.0%
GATTGTTGTGAGTATATTGA+AGG + chr8_4:31410556-31410575 Msa1323210:intron 30.0%
AGGAAAAAATCCGACAAATT+CGG - chr8_4:31410593-31410612 None:intergenic 30.0%
AAATCAAAAACCGTCAACAT+AGG - chr8_4:31410613-31410632 None:intergenic 30.0%
!! TTGATTTGCAAGGTATTAGA+AGG + chr8_4:31410626-31410645 Msa1323210:intron 30.0%
!! TTCTGTTGTTTCTGTTAAGA+AGG + chr8_4:31410651-31410670 Msa1323210:CDS 30.0%
!!! AGAAGGTTTTGAGTATTTTC+AGG + chr8_4:31410668-31410687 Msa1323210:CDS 30.0%
!! AGTATTTTCAGGAGATTTGT+CGG + chr8_4:31410679-31410698 Msa1323210:CDS 30.0%
TGCTTTGCTCAATATTTCTT+TGG + chr8_4:31410759-31410778 Msa1323210:CDS 30.0%
CTCAATATTTCTTTGGATGA+TGG + chr8_4:31410766-31410785 Msa1323210:CDS 30.0%
TGAGATTGAACATTTATTGC+TGG + chr8_4:31410810-31410829 Msa1323210:CDS 30.0%
AATTTATGGGTCATGTTAAC+CGG + chr8_4:31410913-31410932 Msa1323210:intron 30.0%
CTGGTTAAAGATACCAAAAA+AGG + chr8_4:31410948-31410967 Msa1323210:intron 30.0%
ATATTAAGGGAAATGCTAAC+CGG - chr8_4:31411086-31411105 None:intergenic 30.0%
GCACGGTGTATATATATTAA+GGG - chr8_4:31411099-31411118 None:intergenic 30.0%
TGCACGGTGTATATATATTA+AGG - chr8_4:31411100-31411119 None:intergenic 30.0%
CAAATATTTCAGTGATCTTG+TGG - chr8_4:31411133-31411152 None:intergenic 30.0%
GTCTACCGCTAAATATATTA+GGG - chr8_4:31411257-31411276 None:intergenic 30.0%
!! TTTTAAGTACTAGTCTATGG+TGG - chr8_4:31411285-31411304 None:intergenic 30.0%
TCGCATTTGTTTGTAACAAA+CGG - chr8_4:31411402-31411421 None:intergenic 30.0%
!! GAACACATATTTGGTTTGAT+TGG + chr8_4:31411435-31411454 Msa1323210:intron 30.0%
! AAAACTATGGGCATTTTGAA+AGG - chr8_4:31411594-31411613 None:intergenic 30.0%
!!! CTTAGAGTGGTTTTTTTGGT+TGG - chr8_4:31410018-31410037 None:intergenic 35.0%
!!! GAAGCTTAGAGTGGTTTTTT+TGG - chr8_4:31410022-31410041 None:intergenic 35.0%
!!! GTTTGTTGCCTAGTTTTAGA+AGG - chr8_4:31410079-31410098 None:intergenic 35.0%
CAACAAACCACATCATTCTT+TGG + chr8_4:31410091-31410110 Msa1323210:CDS 35.0%
GCAAACCTTTCAAACATTCA+TGG + chr8_4:31410113-31410132 Msa1323210:CDS 35.0%
TTGGACCATGAATGTTTGAA+AGG - chr8_4:31410121-31410140 None:intergenic 35.0%
ATGACACCTTACTATCAAAC+CGG + chr8_4:31410219-31410238 Msa1323210:CDS 35.0%
! CAAAAAGTGTAGCGAAATTG+AGG + chr8_4:31410421-31410440 Msa1323210:CDS 35.0%
GTGAGTATATTGAAGGAAGT+TGG + chr8_4:31410563-31410582 Msa1323210:intron 35.0%
!!! CGGATTTTTTCCTATGTTGA+CGG + chr8_4:31410600-31410619 Msa1323210:intron 35.0%
!!! TTGACGGTTTTTGATTTGCA+AGG + chr8_4:31410616-31410635 Msa1323210:intron 35.0%
!! GTATTTTCAGGAGATTTGTC+GGG + chr8_4:31410680-31410699 Msa1323210:CDS 35.0%
!! TATTTTCAGGAGATTTGTCG+GGG + chr8_4:31410681-31410700 Msa1323210:CDS 35.0%
GGTCTACCGCTAAATATATT+AGG - chr8_4:31411258-31411277 None:intergenic 35.0%
!! TTGTAACAAACGGTACTGAT+CGG - chr8_4:31411392-31411411 None:intergenic 35.0%
!! TAAAACTTTAAGGGTGTCCT+TGG - chr8_4:31411499-31411518 None:intergenic 35.0%
CTAGCAAAGATGACATACAT+TGG - chr8_4:31411532-31411551 None:intergenic 35.0%
! TACCAGAACATATTTGTTGC+AGG + chr8_4:31411765-31411784 Msa1323210:intron 35.0%
TTCCTGCAACAAATATGTTC+TGG - chr8_4:31411770-31411789 None:intergenic 35.0%
!!! CTTAGAGTGGTTTTTTTGGT+TGG - chr8_4:31410018-31410037 None:intergenic 35.0%
!!! GAAGCTTAGAGTGGTTTTTT+TGG - chr8_4:31410022-31410041 None:intergenic 35.0%
!!! GTTTGTTGCCTAGTTTTAGA+AGG - chr8_4:31410079-31410098 None:intergenic 35.0%
CAACAAACCACATCATTCTT+TGG + chr8_4:31410091-31410110 Msa1323210:CDS 35.0%
GCAAACCTTTCAAACATTCA+TGG + chr8_4:31410113-31410132 Msa1323210:CDS 35.0%
TTGGACCATGAATGTTTGAA+AGG - chr8_4:31410121-31410140 None:intergenic 35.0%
ATGACACCTTACTATCAAAC+CGG + chr8_4:31410219-31410238 Msa1323210:CDS 35.0%
! CAAAAAGTGTAGCGAAATTG+AGG + chr8_4:31410421-31410440 Msa1323210:CDS 35.0%
GTGAGTATATTGAAGGAAGT+TGG + chr8_4:31410563-31410582 Msa1323210:intron 35.0%
!!! CGGATTTTTTCCTATGTTGA+CGG + chr8_4:31410600-31410619 Msa1323210:intron 35.0%
!!! TTGACGGTTTTTGATTTGCA+AGG + chr8_4:31410616-31410635 Msa1323210:intron 35.0%
!! GTATTTTCAGGAGATTTGTC+GGG + chr8_4:31410680-31410699 Msa1323210:CDS 35.0%
!! TATTTTCAGGAGATTTGTCG+GGG + chr8_4:31410681-31410700 Msa1323210:CDS 35.0%
GGTCTACCGCTAAATATATT+AGG - chr8_4:31411258-31411277 None:intergenic 35.0%
!! TTGTAACAAACGGTACTGAT+CGG - chr8_4:31411392-31411411 None:intergenic 35.0%
!! TAAAACTTTAAGGGTGTCCT+TGG - chr8_4:31411499-31411518 None:intergenic 35.0%
CTAGCAAAGATGACATACAT+TGG - chr8_4:31411532-31411551 None:intergenic 35.0%
! TACCAGAACATATTTGTTGC+AGG + chr8_4:31411765-31411784 Msa1323210:intron 35.0%
TTCCTGCAACAAATATGTTC+TGG - chr8_4:31411770-31411789 None:intergenic 35.0%
AGGTTTCCTATTATGGGAAG+TGG - chr8_4:31410059-31410078 None:intergenic 40.0%
AGGTTTGCCAAAGAATGATG+TGG - chr8_4:31410101-31410120 None:intergenic 40.0%
GTCTGCTGAGGATATTACAA+TGG - chr8_4:31410174-31410193 None:intergenic 40.0%
!! TTCTTTTGCTATGTCTGCTG+AGG - chr8_4:31410186-31410205 None:intergenic 40.0%
ATTGAGGAAGCTGTCGATAT+TGG + chr8_4:31410437-31410456 Msa1323210:CDS 40.0%
! AGATTTTGTGCATTCTGCTG+AGG + chr8_4:31410514-31410533 Msa1323210:CDS 40.0%
! AATCACTGTCTTAAGAGCAC+CGG + chr8_4:31411064-31411083 Msa1323210:intron 40.0%
TTGTGGTCATGATTGATGCA+CGG - chr8_4:31411116-31411135 None:intergenic 40.0%
!! TGTAACAAACGGTACTGATC+GGG - chr8_4:31411391-31411410 None:intergenic 40.0%
!! ACTATGGGCATTTTGAAAGG+CGG - chr8_4:31411591-31411610 None:intergenic 40.0%
AGGTTTCCTATTATGGGAAG+TGG - chr8_4:31410059-31410078 None:intergenic 40.0%
AGGTTTGCCAAAGAATGATG+TGG - chr8_4:31410101-31410120 None:intergenic 40.0%
GTCTGCTGAGGATATTACAA+TGG - chr8_4:31410174-31410193 None:intergenic 40.0%
!! TTCTTTTGCTATGTCTGCTG+AGG - chr8_4:31410186-31410205 None:intergenic 40.0%
ATTGAGGAAGCTGTCGATAT+TGG + chr8_4:31410437-31410456 Msa1323210:CDS 40.0%
! AGATTTTGTGCATTCTGCTG+AGG + chr8_4:31410514-31410533 Msa1323210:CDS 40.0%
! AATCACTGTCTTAAGAGCAC+CGG + chr8_4:31411064-31411083 Msa1323210:intron 40.0%
TTGTGGTCATGATTGATGCA+CGG - chr8_4:31411116-31411135 None:intergenic 40.0%
!! TGTAACAAACGGTACTGATC+GGG - chr8_4:31411391-31411410 None:intergenic 40.0%
!! ACTATGGGCATTTTGAAAGG+CGG - chr8_4:31411591-31411610 None:intergenic 40.0%
CCTATTATGGGAAGTGGTGA+AGG - chr8_4:31410053-31410072 None:intergenic 45.0%
CCTTCACCACTTCCCATAAT+AGG + chr8_4:31410050-31410069 Msa1323210:CDS 45.0%
! GACAGTCCGGTTTGATAGTA+AGG - chr8_4:31410228-31410247 None:intergenic 45.0%
! TGAGGAAGCTGGAGAGTATA+AGG + chr8_4:31410532-31410551 Msa1323210:CDS 45.0%
!! AGTTGGAGCACCGAATTTGT+CGG + chr8_4:31410580-31410599 Msa1323210:intron 45.0%
GAAAGGTTGAAGTTGAGGGA+AGG + chr8_4:31410703-31410722 Msa1323210:CDS 45.0%
! TTGAAGTTGAGGGAAGGTAC+TGG + chr8_4:31410709-31410728 Msa1323210:CDS 45.0%
!! GGATGATGGGAAGATTGAGA+TGG + chr8_4:31410780-31410799 Msa1323210:CDS 45.0%
ATCACACATGAGTGGTTGAG+TGG + chr8_4:31411177-31411196 Msa1323210:intron 45.0%
! GTACTAGTCTATGGTGGAAG+TGG - chr8_4:31411279-31411298 None:intergenic 45.0%
TACTGATCGGGTGACTTTCT+CGG - chr8_4:31411379-31411398 None:intergenic 45.0%
! CCTTGGTGTAACTGAGACAA+TGG - chr8_4:31411482-31411501 None:intergenic 45.0%
CCATTGTCTCAGTTACACCA+AGG + chr8_4:31411479-31411498 Msa1323210:intron 45.0%
CCTATTATGGGAAGTGGTGA+AGG - chr8_4:31410053-31410072 None:intergenic 45.0%
CCTTCACCACTTCCCATAAT+AGG + chr8_4:31410050-31410069 Msa1323210:CDS 45.0%
! GACAGTCCGGTTTGATAGTA+AGG - chr8_4:31410228-31410247 None:intergenic 45.0%
! TGAGGAAGCTGGAGAGTATA+AGG + chr8_4:31410532-31410551 Msa1323210:CDS 45.0%
!! AGTTGGAGCACCGAATTTGT+CGG + chr8_4:31410580-31410599 Msa1323210:intron 45.0%
GAAAGGTTGAAGTTGAGGGA+AGG + chr8_4:31410703-31410722 Msa1323210:CDS 45.0%
! TTGAAGTTGAGGGAAGGTAC+TGG + chr8_4:31410709-31410728 Msa1323210:CDS 45.0%
!! GGATGATGGGAAGATTGAGA+TGG + chr8_4:31410780-31410799 Msa1323210:CDS 45.0%
ATCACACATGAGTGGTTGAG+TGG + chr8_4:31411177-31411196 Msa1323210:intron 45.0%
! GTACTAGTCTATGGTGGAAG+TGG - chr8_4:31411279-31411298 None:intergenic 45.0%
TACTGATCGGGTGACTTTCT+CGG - chr8_4:31411379-31411398 None:intergenic 45.0%
! CCTTGGTGTAACTGAGACAA+TGG - chr8_4:31411482-31411501 None:intergenic 45.0%
CCATTGTCTCAGTTACACCA+AGG + chr8_4:31411479-31411498 Msa1323210:intron 45.0%
!!! AATATATTAGATTTAATTTA+TGG + chr8_4:31410899-31410918 Msa1323210:intron 5.0%
!!! ATATATTAGATTTAATTTAT+GGG + chr8_4:31410900-31410919 Msa1323210:intron 5.0%
!!! AATATATTAGATTTAATTTA+TGG + chr8_4:31410899-31410918 Msa1323210:intron 5.0%
!!! ATATATTAGATTTAATTTAT+GGG + chr8_4:31410900-31410919 Msa1323210:intron 5.0%
AACCACTCTAAGCTTCCACC+AGG + chr8_4:31410026-31410045 Msa1323210:CDS 50.0%
ACTATCAAACCGGACTGTCC+CGG + chr8_4:31410229-31410248 Msa1323210:CDS 50.0%
TTATGCGTGTTTCCCCACGT+TGG + chr8_4:31410294-31410313 Msa1323210:CDS 50.0%
! CAAAACTCTCGATTCGAGCC+AGG + chr8_4:31410358-31410377 Msa1323210:CDS 50.0%
TCAGGAGATTTGTCGGGGAA+AGG + chr8_4:31410686-31410705 Msa1323210:CDS 50.0%
TCGGGGAAAGGTTGAAGTTG+AGG + chr8_4:31410698-31410717 Msa1323210:CDS 50.0%
CGGGGAAAGGTTGAAGTTGA+GGG + chr8_4:31410699-31410718 Msa1323210:CDS 50.0%
TATCTTTAACCAGTGCCCCG+GGG - chr8_4:31410941-31410960 None:intergenic 50.0%
GTATCTTTAACCAGTGCCCC+GGG - chr8_4:31410942-31410961 None:intergenic 50.0%
GGTATCTTTAACCAGTGCCC+CGG - chr8_4:31410943-31410962 None:intergenic 50.0%
AACCACTCTAAGCTTCCACC+AGG + chr8_4:31410026-31410045 Msa1323210:CDS 50.0%
ACTATCAAACCGGACTGTCC+CGG + chr8_4:31410229-31410248 Msa1323210:CDS 50.0%
TTATGCGTGTTTCCCCACGT+TGG + chr8_4:31410294-31410313 Msa1323210:CDS 50.0%
! CAAAACTCTCGATTCGAGCC+AGG + chr8_4:31410358-31410377 Msa1323210:CDS 50.0%
TCAGGAGATTTGTCGGGGAA+AGG + chr8_4:31410686-31410705 Msa1323210:CDS 50.0%
TCGGGGAAAGGTTGAAGTTG+AGG + chr8_4:31410698-31410717 Msa1323210:CDS 50.0%
CGGGGAAAGGTTGAAGTTGA+GGG + chr8_4:31410699-31410718 Msa1323210:CDS 50.0%
TATCTTTAACCAGTGCCCCG+GGG - chr8_4:31410941-31410960 None:intergenic 50.0%
GTATCTTTAACCAGTGCCCC+GGG - chr8_4:31410942-31410961 None:intergenic 50.0%
GGTATCTTTAACCAGTGCCC+CGG - chr8_4:31410943-31410962 None:intergenic 50.0%
GACCTGGTGGAAGCTTAGAG+TGG - chr8_4:31410031-31410050 None:intergenic 55.0%
ATGGGAAGTGGTGAAGGACC+TGG - chr8_4:31410047-31410066 None:intergenic 55.0%
! TTGAGAACGGAGAGTGCGTC+CGG - chr8_4:31410251-31410270 None:intergenic 55.0%
!! TTCTAAGGTCGCGCCAACGT+GGG - chr8_4:31410310-31410329 None:intergenic 55.0%
!! TTTCTAAGGTCGCGCCAACG+TGG - chr8_4:31410311-31410330 None:intergenic 55.0%
GTGCATTCTGCTGAGGAAGC+TGG + chr8_4:31410521-31410540 Msa1323210:CDS 55.0%
GACCTGGTGGAAGCTTAGAG+TGG - chr8_4:31410031-31410050 None:intergenic 55.0%
ATGGGAAGTGGTGAAGGACC+TGG - chr8_4:31410047-31410066 None:intergenic 55.0%
! TTGAGAACGGAGAGTGCGTC+CGG - chr8_4:31410251-31410270 None:intergenic 55.0%
!! TTCTAAGGTCGCGCCAACGT+GGG - chr8_4:31410310-31410329 None:intergenic 55.0%
!! TTTCTAAGGTCGCGCCAACG+TGG - chr8_4:31410311-31410330 None:intergenic 55.0%
GTGCATTCTGCTGAGGAAGC+TGG + chr8_4:31410521-31410540 Msa1323210:CDS 55.0%
GGAAGTGGTGAAGGACCTGG+TGG - chr8_4:31410044-31410063 None:intergenic 60.0%
! TGAGAACGGAGAGTGCGTCC+GGG - chr8_4:31410250-31410269 None:intergenic 60.0%
! TCTAAGGTCGCGCCAACGTG+GGG - chr8_4:31410309-31410328 None:intergenic 60.0%
! TCGATTCGAGCCAGGCGCTA+AGG + chr8_4:31410366-31410385 Msa1323210:CDS 60.0%
ATTCGAGCCAGGCGCTAAGG+CGG + chr8_4:31410369-31410388 Msa1323210:CDS 60.0%
ATTTCCTCCGCCTTAGCGCC+TGG - chr8_4:31410379-31410398 None:intergenic 60.0%
GGTCATGTTAACCGGTGCCC+CGG + chr8_4:31410921-31410940 Msa1323210:intron 60.0%
GTCATGTTAACCGGTGCCCC+GGG + chr8_4:31410922-31410941 Msa1323210:intron 60.0%
TCATGTTAACCGGTGCCCCG+GGG + chr8_4:31410923-31410942 Msa1323210:intron 60.0%
GGAAGTGGTGAAGGACCTGG+TGG - chr8_4:31410044-31410063 None:intergenic 60.0%
! TGAGAACGGAGAGTGCGTCC+GGG - chr8_4:31410250-31410269 None:intergenic 60.0%
! TCTAAGGTCGCGCCAACGTG+GGG - chr8_4:31410309-31410328 None:intergenic 60.0%
! TCGATTCGAGCCAGGCGCTA+AGG + chr8_4:31410366-31410385 Msa1323210:CDS 60.0%
ATTCGAGCCAGGCGCTAAGG+CGG + chr8_4:31410369-31410388 Msa1323210:CDS 60.0%
ATTTCCTCCGCCTTAGCGCC+TGG - chr8_4:31410379-31410398 None:intergenic 60.0%
GGTCATGTTAACCGGTGCCC+CGG + chr8_4:31410921-31410940 Msa1323210:intron 60.0%
GTCATGTTAACCGGTGCCCC+GGG + chr8_4:31410922-31410941 Msa1323210:intron 60.0%
TCATGTTAACCGGTGCCCCG+GGG + chr8_4:31410923-31410942 Msa1323210:intron 60.0%
AGAGTGCGTCCGGGACAGTC+CGG - chr8_4:31410241-31410260 None:intergenic 65.0%
AGAGTGCGTCCGGGACAGTC+CGG - chr8_4:31410241-31410260 None:intergenic 65.0%
TAACCAGTGCCCCGGGGCAC+CGG - chr8_4:31410935-31410954 None:intergenic 70.0%
TAACCAGTGCCCCGGGGCAC+CGG - chr8_4:31410935-31410954 None:intergenic 70.0%
CGAGCCAGGCGCTAAGGCGG+AGG + chr8_4:31410372-31410391 Msa1323210:CDS 75.0%
TAACCGGTGCCCCGGGGCAC+TGG + chr8_4:31410929-31410948 Msa1323210:intron 75.0%
CGAGCCAGGCGCTAAGGCGG+AGG + chr8_4:31410372-31410391 Msa1323210:CDS 75.0%
TAACCGGTGCCCCGGGGCAC+TGG + chr8_4:31410929-31410948 Msa1323210:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 31409975 31411813 31409975 ID=Msa1323210;Name=Msa1323210
chr8_4 mRNA 31409975 31411813 31409975 ID=Msa1323210-mRNA-1;Parent=Msa1323210;Name=Msa1323210-mRNA-1;_AED=0.31;_eAED=0.34;_QI=0|0|0|1|0.5|0.66|3|0|270
chr8_4 exon 31409975 31410566 31409975 ID=Msa1323210-mRNA-1:exon:10226;Parent=Msa1323210-mRNA-1
chr8_4 exon 31410638 31410831 31410638 ID=Msa1323210-mRNA-1:exon:10227;Parent=Msa1323210-mRNA-1
chr8_4 exon 31411787 31411813 31411787 ID=Msa1323210-mRNA-1:exon:10228;Parent=Msa1323210-mRNA-1
chr8_4 CDS 31409975 31410566 31409975 ID=Msa1323210-mRNA-1:cds;Parent=Msa1323210-mRNA-1
chr8_4 CDS 31410638 31410831 31410638 ID=Msa1323210-mRNA-1:cds;Parent=Msa1323210-mRNA-1
chr8_4 CDS 31411787 31411813 31411787 ID=Msa1323210-mRNA-1:cds;Parent=Msa1323210-mRNA-1
Gene Sequence

>Msa1323210

ATGCTTCTCCTTATCAAATTTCTTATTCCAACAAACAAAACCAACCAAAAAAACCACTCTAAGCTTCCACCAGGTCCTTCACCACTTCCCATAATAGGAAACCTTCTAAAACTAGGCAACAAACCACATCATTCTTTGGCAAACCTTTCAAACATTCATGGTCCAATAATGACACTAAAGTTAGGCCAAGTAACAACCATTGTAATATCCTCAGCAGACATAGCAAAAGAAGTTCTACAAACACATGACACCTTACTATCAAACCGGACTGTCCCGGACGCACTCTCCGTTCTCAACCATGATCAATATAGTTTGTCATTTATGCGTGTTTCCCCACGTTGGCGCGACCTTAGAAAAATTTGCAATAACCAGTTGTTTTCAAACAAAACTCTCGATTCGAGCCAGGCGCTAAGGCGGAGGAAATTACAAGACCTCTTAGATGACATCAAAAAGTGTAGCGAAATTGAGGAAGCTGTCGATATTGGAAGAGTTGCTTTCATGACGACGATTAATTTGTTGTCGAATACTTTTTTCTCGGCAGATTTTGTGCATTCTGCTGAGGAAGCTGGAGAGTATAAGGAGATTGTTGTGAGTATTAGAAGGCGTTCTGTTGTTTCTGTTAAGAAGGTTTTGAGTATTTTCAGGAGATTTGTCGGGGAAAGGTTGAAGTTGAGGGAAGGTACTGGTTCTATTGAGAATGATGATGTTCTAGATGCTTTGCTCAATATTTCTTTGGATGATGGGAAGATTGAGATGGATAAAGATGAGATTGAACATTTATTGCTGGAACAGACACAACAACATACACACTAG
Protein sequence

>Msa1323210

MLLLIKFLIPTNKTNQKNHSKLPPGPSPLPIIGNLLKLGNKPHHSLANLSNIHGPIMTLKLGQVTTIVISSADIAKEVLQTHDTLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNQLFSNKTLDSSQALRRRKLQDLLDDIKKCSEIEEAVDIGRVAFMTTINLLSNTFFSADFVHSAEEAGEYKEIVVSIRRRSVVSVKKVLSIFRRFVGERLKLREGTGSIENDDVLDALLNISLDDGKIEMDKDEIEHLLLEQTQQHTH*