Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323930 | sp|Q0WU02|MTP10_ARATH | 71.679 | 399 | 94 | 3 | 9 | 399 | 39 | 426 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323930 | A0A072TRA6 | 94.776 | 402 | 13 | 3 | 1 | 402 | 1 | 394 | 0.0 | 782 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028620 | Msa1323930 | 0.812374 | 4.377948e-51 | -8.615850e-47 |
| Msa1236440 | Msa1323930 | 0.803960 | 2.716602e-49 | -8.615850e-47 |
| Msa1277670 | Msa1323930 | 0.800979 | 1.117672e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323930 | MtrunA17_Chr8g0357061 | 94.776 | 402 | 13 | 3 | 1 | 402 | 1 | 394 | 0.0 | 782 |
| Msa1323930 | MtrunA17_Chr2g0310301 | 77.750 | 400 | 76 | 4 | 8 | 402 | 2 | 393 | 0.0 | 611 |
| Msa1323930 | MtrunA17_Chr3g0119281 | 62.051 | 390 | 134 | 2 | 12 | 401 | 23 | 398 | 8.39e-174 | 491 |
| Msa1323930 | MtrunA17_Chr7g0222641 | 60.207 | 387 | 142 | 4 | 13 | 398 | 20 | 395 | 1.23e-164 | 467 |
| Msa1323930 | MtrunA17_Chr3g0108381 | 55.287 | 331 | 141 | 4 | 72 | 401 | 72 | 396 | 2.14e-128 | 375 |
| Msa1323930 | MtrunA17_Chr5g0432881 | 54.683 | 331 | 143 | 4 | 72 | 401 | 65 | 389 | 6.74e-126 | 369 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323930 | AT1G16310.1 | 71.679 | 399 | 94 | 3 | 9 | 399 | 39 | 426 | 0.0 | 570 |
| Msa1323930 | AT1G79520.1 | 69.307 | 404 | 109 | 4 | 6 | 402 | 7 | 402 | 0.0 | 554 |
| Msa1323930 | AT1G79520.2 | 67.554 | 413 | 113 | 4 | 6 | 402 | 7 | 414 | 0.0 | 550 |
| Msa1323930 | AT1G79520.3 | 77.581 | 339 | 76 | 0 | 64 | 402 | 11 | 349 | 0.0 | 550 |
| Msa1323930 | AT1G79520.4 | 77.581 | 339 | 76 | 0 | 64 | 402 | 11 | 349 | 0.0 | 550 |
| Msa1323930 | AT1G16310.2 | 80.511 | 313 | 61 | 0 | 87 | 399 | 1 | 313 | 0.0 | 518 |
| Msa1323930 | AT2G39450.1 | 57.935 | 397 | 151 | 5 | 3 | 398 | 8 | 389 | 6.40e-141 | 407 |
| Msa1323930 | AT3G58060.2 | 59.247 | 292 | 117 | 2 | 112 | 401 | 113 | 404 | 5.58e-124 | 365 |
| Msa1323930 | AT3G58060.1 | 59.247 | 292 | 117 | 2 | 112 | 401 | 113 | 404 | 5.58e-124 | 365 |
| Msa1323930 | AT2G47830.1 | 22.997 | 287 | 196 | 8 | 123 | 389 | 84 | 365 | 1.10e-11 | 66.6 |
Find 77 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTGTGTGCTTGATTTAA+AGG | 0.123675 | 8_4:+32630939 | None:intergenic |
| TTCCAATTGGATAGTGAAAA+TGG | 0.205432 | 8_4:+32632797 | None:intergenic |
| ATGAGACAATATTACAATAT+TGG | 0.263673 | 8_4:-32630740 | Msa1323930:three_prime_UTR |
| GAAAGTTGACATATCTAATA+TGG | 0.286746 | 8_4:-32631061 | Msa1323930:CDS |
| TGTTGGCTGTCAAGTTCTAT+TGG | 0.308737 | 8_4:-32631841 | Msa1323930:CDS |
| TTTACCTCGGTAAGACTTCC+TGG | 0.313970 | 8_4:+32633374 | None:intergenic |
| TTAAATCAAGCACACAATAT+TGG | 0.317732 | 8_4:-32630936 | Msa1323930:CDS |
| ACTATACTTACTGCTGTTAC+CGG | 0.322297 | 8_4:+32635343 | None:intergenic |
| TGATTTAAAGGCATATCTTC+TGG | 0.354695 | 8_4:+32630951 | None:intergenic |
| GTCAACTTTCCTAGAAAATC+AGG | 0.364143 | 8_4:+32631074 | None:intergenic |
| CTATGTGCTTAACCTCTTCA+TGG | 0.378933 | 8_4:+32631033 | None:intergenic |
| TGCATCCGTTTCTTTCCAAT+TGG | 0.388246 | 8_4:+32632784 | None:intergenic |
| TATACCATCATCTTGTGTTC+AGG | 0.390318 | 8_4:+32630831 | None:intergenic |
| ACAAAAGCTCTTTCAACTTC+AGG | 0.412332 | 8_4:+32630882 | None:intergenic |
| AGCAGCTAATCCAACTGAAT+TGG | 0.421069 | 8_4:+32631868 | None:intergenic |
| AAAGATCCAAGAGAGAATCT+AGG | 0.424304 | 8_4:+32632869 | None:intergenic |
| ATGGATACTATGACTGAAAC+AGG | 0.431125 | 8_4:-32633404 | Msa1323930:CDS |
| TGCATCAGTGATGGCAACCT+TGG | 0.440195 | 8_4:-32632209 | Msa1323930:CDS |
| CGTTGTACACAATCAATACA+TGG | 0.448712 | 8_4:-32631148 | Msa1323930:CDS |
| TTCCACCCTAGATTCTCTCT+TGG | 0.449374 | 8_4:-32632875 | Msa1323930:CDS |
| GCATCAGTGATGGCAACCTT+GGG | 0.450148 | 8_4:-32632208 | Msa1323930:CDS |
| GTGAAGTTATTCAGAACAAA+AGG | 0.458890 | 8_4:-32635578 | Msa1323930:five_prime_UTR |
| TTCAACTCTCACACTTTCTC+CGG | 0.462458 | 8_4:+32635499 | None:intergenic |
| CCACGTTCCTTCACTTTCAG+TGG | 0.463244 | 8_4:-32635380 | Msa1323930:CDS |
| GAGAATGTATCATCTCTAAT+CGG | 0.466604 | 8_4:-32631110 | Msa1323930:CDS |
| TGGATTAGCTGCTGCTGTGT+TGG | 0.467111 | 8_4:-32631858 | Msa1323930:CDS |
| TGTGTCAAATGCAGTTAACT+TGG | 0.467579 | 8_4:-32632956 | Msa1323930:CDS |
| TGCAGAATACTATAAACAAC+AGG | 0.473003 | 8_4:-32633453 | Msa1323930:CDS |
| CTTGGTACTATTTGCAGCAA+AGG | 0.479678 | 8_4:-32632938 | Msa1323930:CDS |
| ACTATCCAATTGGAAAGAAA+CGG | 0.490149 | 8_4:-32632789 | Msa1323930:CDS |
| ACGGTTCAATTTCAAAACTC+TGG | 0.494365 | 8_4:-32635648 | None:intergenic |
| TGTTACCGGGTTTGCGAACA+AGG | 0.494411 | 8_4:+32635357 | None:intergenic |
| GATGTTATTACCAATTCAGT+TGG | 0.495698 | 8_4:-32631878 | Msa1323930:CDS |
| ATTGGATAGTGAAAATGGTT+TGG | 0.503302 | 8_4:+32632802 | None:intergenic |
| ACTGTGAGAGCATACACATT+TGG | 0.503635 | 8_4:-32631008 | Msa1323930:CDS |
| AGTGGCCTTGTTCGCAAACC+CGG | 0.504184 | 8_4:-32635362 | Msa1323930:CDS |
| CTATTGGTGGATCGATCCAT+TGG | 0.511645 | 8_4:-32631825 | Msa1323930:CDS |
| GAGAGTGACCGCGGCGCCAC+CGG | 0.511666 | 8_4:-32635518 | Msa1323930:CDS |
| GAGATGGATGATCGCGATCA+TGG | 0.515677 | 8_4:-32631993 | Msa1323930:CDS |
| CAACAGGAGAGGCTACTTGA+AGG | 0.518298 | 8_4:-32633437 | Msa1323930:CDS |
| TTCCATGACGATGATGATGA+AGG | 0.523221 | 8_4:+32635476 | None:intergenic |
| TGGCTGTCAAGTTCTATTGG+TGG | 0.535980 | 8_4:-32631838 | Msa1323930:CDS |
| AAGATCCAAGAGAGAATCTA+GGG | 0.537253 | 8_4:+32632870 | None:intergenic |
| CACTTTCTCCGGTGGCGCCG+CGG | 0.537395 | 8_4:+32635510 | None:intergenic |
| CTATACTTACTGCTGTTACC+GGG | 0.541292 | 8_4:+32635344 | None:intergenic |
| AACCTTCATCATCATCGTCA+TGG | 0.545988 | 8_4:-32635478 | Msa1323930:CDS |
| TATTGGTGGATCGATCCATT+GGG | 0.546329 | 8_4:-32631824 | Msa1323930:CDS |
| AACTCTCACACTTTCTCCGG+TGG | 0.552469 | 8_4:+32635502 | None:intergenic |
| TGAATCATAGTGAGTTGAGA+TGG | 0.568901 | 8_4:-32632009 | Msa1323930:CDS |
| AAGTGAAGGAACGTGGTTGA+CGG | 0.568954 | 8_4:+32635387 | None:intergenic |
| TGATTTCAGAGAAGCAACGC+AGG | 0.574549 | 8_4:-32633478 | Msa1323930:intron |
| TGGAAAGAAACGGATGCAGC+CGG | 0.575141 | 8_4:-32632779 | Msa1323930:CDS |
| TATAGAGAGAGATATAGAGA+AGG | 0.577337 | 8_4:+32635604 | None:intergenic |
| GTGGTTGACGGTTATGATGA+TGG | 0.580191 | 8_4:+32635399 | None:intergenic |
| TGGCAGGCAAATTATTGCAA+AGG | 0.581787 | 8_4:-32632164 | Msa1323930:intron |
| CAGGCCTGAACACAAGATGA+TGG | 0.605331 | 8_4:-32630835 | Msa1323930:CDS |
| GATTGTAAAAGCCTATGCGC+AGG | 0.605814 | 8_4:-32631912 | Msa1323930:CDS |
| ATATAACCTGTAAAACATGT+CGG | 0.606407 | 8_4:-32635540 | Msa1323930:exon |
| ATGTATCATCTCTAATCGGA+AGG | 0.610711 | 8_4:-32631106 | Msa1323930:CDS |
| GATGGTGATGATGATGATCA+TGG | 0.611195 | 8_4:+32635417 | None:intergenic |
| AAAACAATGATCCTGCGCAT+AGG | 0.621188 | 8_4:+32631901 | None:intergenic |
| CTCACAATAATAGCTCCCAA+TGG | 0.632925 | 8_4:+32631809 | None:intergenic |
| AACAAGGCCACTGAAAGTGA+AGG | 0.641573 | 8_4:+32635373 | None:intergenic |
| ACTTGAAGGCTATAATGACA+TGG | 0.644642 | 8_4:-32633423 | Msa1323930:CDS |
| ATCCAAGAGAGAATCTAGGG+TGG | 0.644644 | 8_4:+32632873 | None:intergenic |
| GATCAAAATCTGCAATCCCA+AGG | 0.648879 | 8_4:+32632192 | None:intergenic |
| GATTTCAGAGAAGCAACGCA+GGG | 0.655531 | 8_4:-32633477 | Msa1323930:intron |
| AATATGGAATCACCATGAAG+AGG | 0.655738 | 8_4:-32631045 | Msa1323930:CDS |
| GTTGTACACAATCAATACAT+GGG | 0.667462 | 8_4:-32631147 | Msa1323930:CDS |
| TGATGATCATGGTGATGATG+TGG | 0.670441 | 8_4:+32635428 | None:intergenic |
| CATTAAAATAAACTTCACAA+TGG | 0.671507 | 8_4:+32631961 | None:intergenic |
| AATACTATAAACAACAGGAG+AGG | 0.673271 | 8_4:-32633448 | Msa1323930:CDS |
| AACTTTCCTAGAAAATCAGG+TGG | 0.675539 | 8_4:+32631077 | None:intergenic |
| CCACTGAAAGTGAAGGAACG+TGG | 0.688283 | 8_4:+32635380 | None:intergenic |
| GTCATGGAAACTGAATGTGA+AGG | 0.700201 | 8_4:-32635462 | Msa1323930:CDS |
| AACATGTCGGAGAGTGACCG+CGG | 0.705350 | 8_4:-32635527 | Msa1323930:CDS |
| AAAGAAACGGATGCAGCCGG+TGG | 0.711822 | 8_4:-32632776 | Msa1323930:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTAAATAATTTTTATAAG+TGG | - | chr8_4:32631684-32631703 | Msa1323930:intron | 10.0% |
| !! | GAAAAAATATACATTATTGA+TGG | + | chr8_4:32631469-32631488 | None:intergenic | 15.0% |
| !! | ATCAAAACAAGAATAAAATA+GGG | + | chr8_4:32631562-32631581 | None:intergenic | 15.0% |
| !! | AATCAAAACAAGAATAAAAT+AGG | + | chr8_4:32631563-32631582 | None:intergenic | 15.0% |
| !!! | AAATAATTTTTATAAGTGGT+TGG | - | chr8_4:32631688-32631707 | Msa1323930:intron | 15.0% |
| !! | TCAATTCAATATTAACAAAA+CGG | - | chr8_4:32631868-32631887 | Msa1323930:CDS | 15.0% |
| !! | TTTAGTATAATCATATATGT+TGG | + | chr8_4:32631948-32631967 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTCTTTTTTTTTG+TGG | - | chr8_4:32632134-32632153 | Msa1323930:intron | 15.0% |
| !!! | ACCTTTTTAATAGTTTAAAT+TGG | - | chr8_4:32633611-32633630 | Msa1323930:intron | 15.0% |
| !! | TAACTATAAAATCAAATTAG+TGG | + | chr8_4:32634574-32634593 | None:intergenic | 15.0% |
| !! | TTGAATTGAAAAGAAATTGA+TGG | + | chr8_4:32631857-32631876 | None:intergenic | 20.0% |
| !!! | GCATATACTTTAAAGTTAAA+GGG | + | chr8_4:32632401-32632420 | None:intergenic | 20.0% |
| !!! | TGCATATACTTTAAAGTTAA+AGG | + | chr8_4:32632402-32632421 | None:intergenic | 20.0% |
| !!! | AACTTTAAAGTATATGCAAA+AGG | - | chr8_4:32632404-32632423 | Msa1323930:intron | 20.0% |
| !!! | TTGCTATTATAAAAAGTAGA+TGG | + | chr8_4:32632453-32632472 | None:intergenic | 20.0% |
| !! | TATAGTAAAGTAAAACATGT+TGG | + | chr8_4:32632780-32632799 | None:intergenic | 20.0% |
| !! | ACAAGATTGAATTAAAGTAA+AGG | + | chr8_4:32632804-32632823 | None:intergenic | 20.0% |
| !!! | TTCTTTTTGAGAGTTTTTTT+TGG | - | chr8_4:32632839-32632858 | Msa1323930:CDS | 20.0% |
| !!! | TCTTTTTGAGAGTTTTTTTT+GGG | - | chr8_4:32632840-32632859 | Msa1323930:CDS | 20.0% |
| !!! | TTATTTTATCACCATAATTG+CGG | - | chr8_4:32632996-32633015 | Msa1323930:CDS | 20.0% |
| !! | ATCAGTTACATTATAAACTA+TGG | + | chr8_4:32633169-32633188 | None:intergenic | 20.0% |
| !! | GCCAATTTAAACTATTAAAA+AGG | + | chr8_4:32633615-32633634 | None:intergenic | 20.0% |
| !! | AATCAATGATACAAAGAAAA+AGG | + | chr8_4:32633878-32633897 | None:intergenic | 20.0% |
| !!! | TTTCTTTGTATCATTGATTT+AGG | - | chr8_4:32633879-32633898 | Msa1323930:intron | 20.0% |
| !! | AAAAAACAAGATTACAAGTA+AGG | + | chr8_4:32634275-32634294 | None:intergenic | 20.0% |
| !! | CATTAAAATAAACTTCACAA+TGG | + | chr8_4:32634389-32634408 | None:intergenic | 20.0% |
| !! | AACATTAAATTCTTGAAGAT+TGG | - | chr8_4:32634675-32634694 | Msa1323930:intron | 20.0% |
| !!! | ATACGATTAAAAATAATGGA+CGG | + | chr8_4:32634792-32634811 | None:intergenic | 20.0% |
| !!! | TTGTTATTTTTGTTTACTTG+TGG | - | chr8_4:32635065-32635084 | Msa1323930:intron | 20.0% |
| !! | ATGAGACAATATTACAATAT+TGG | - | chr8_4:32635607-32635626 | Msa1323930:five_prime_UTR | 20.0% |
| ! | ATATAACCTGTAAAACATGT+CGG | - | chr8_4:32630807-32630826 | Msa1323930:three_prime_UTR | 25.0% |
| ! | TTTATAGTAAGAGTCTATGT+AGG | - | chr8_4:32631405-32631424 | Msa1323930:intron | 25.0% |
| !!! | CTTTTGTGTATGTAATTTGT+AGG | - | chr8_4:32631521-32631540 | Msa1323930:intron | 25.0% |
| !!! | TATTCTTGTTTTGATTGTGT+TGG | - | chr8_4:32631567-32631586 | Msa1323930:intron | 25.0% |
| !!! | TTTTTTTTTTGCAGTCTTCT+TGG | - | chr8_4:32631717-32631736 | Msa1323930:intron | 25.0% |
| !!! | TTGTTTTTTCCGTTTATGTT+TGG | - | chr8_4:32631769-32631788 | Msa1323930:intron | 25.0% |
| ! | ATCCAAATTCCAAACATAAA+CGG | + | chr8_4:32631781-32631800 | None:intergenic | 25.0% |
| !!! | TGGATTGTATTAGTTTTAGT+TGG | - | chr8_4:32631796-32631815 | Msa1323930:intron | 25.0% |
| !!! | GGATTGTATTAGTTTTAGTT+GGG | - | chr8_4:32631797-32631816 | Msa1323930:intron | 25.0% |
| ! | TGAATCATGTATGTGAAATT+AGG | - | chr8_4:32632105-32632124 | Msa1323930:intron | 25.0% |
| !!! | CTTTTTCTTTTTTTTTGTGG+CGG | - | chr8_4:32632137-32632156 | Msa1323930:intron | 25.0% |
| !! | GTTGTCCACTTATAAAATTT+TGG | - | chr8_4:32632426-32632445 | Msa1323930:intron | 25.0% |
| !! | ATGGTCCAAAATTTTATAAG+TGG | + | chr8_4:32632434-32632453 | None:intergenic | 25.0% |
| !! | TATCACTTGTTAGTAATTTG+AGG | - | chr8_4:32632618-32632637 | Msa1323930:intron | 25.0% |
| ! | GGTGATAAAATAATTTACCT+CGG | + | chr8_4:32632989-32633008 | None:intergenic | 25.0% |
| !!! | CCATATTGTAAATGTTTTAG+TGG | + | chr8_4:32633133-32633152 | None:intergenic | 25.0% |
| ! | CCACTAAAACATTTACAATA+TGG | - | chr8_4:32633130-32633149 | Msa1323930:intron | 25.0% |
| ! | AAAGTGAAAATGAGACTAAT+TGG | - | chr8_4:32633676-32633695 | Msa1323930:intron | 25.0% |
| ! | TAATTGGATACAAGACTAAT+TGG | - | chr8_4:32633692-32633711 | Msa1323930:intron | 25.0% |
| ! | AATTGGATACAAGACTAATT+GGG | - | chr8_4:32633693-32633712 | Msa1323930:intron | 25.0% |
| !! | GAAAGATATGAGATTTTAGA+TGG | - | chr8_4:32633935-32633954 | Msa1323930:intron | 25.0% |
| !!! | TGTATCATGGTTTTAAATTC+CGG | + | chr8_4:32634077-32634096 | None:intergenic | 25.0% |
| ! | TCAAGTCAATATTTGTATCA+TGG | + | chr8_4:32634090-32634109 | None:intergenic | 25.0% |
| ! | GGTCTTAGATTTCAATTATT+TGG | - | chr8_4:32634645-32634664 | Msa1323930:intron | 25.0% |
| ! | AGTAAACTAGTAATTATGTG+TGG | - | chr8_4:32634729-32634748 | Msa1323930:intron | 25.0% |
| ! | GTAAACTAGTAATTATGTGT+GGG | - | chr8_4:32634730-32634749 | Msa1323930:intron | 25.0% |
| !!! | TACGATTAAAAATAATGGAC+GGG | + | chr8_4:32634791-32634810 | None:intergenic | 25.0% |
| !!! | GTCCATTATTTTTAATCGTA+TGG | - | chr8_4:32634791-32634810 | Msa1323930:intron | 25.0% |
| ! | AGCCATACGATTAAAAATAA+TGG | + | chr8_4:32634796-32634815 | None:intergenic | 25.0% |
| !!! | ATAAAGCAGTTGATTTTTGA+AGG | - | chr8_4:32634868-32634887 | Msa1323930:intron | 25.0% |
| !!! | TAAAGCAGTTGATTTTTGAA+GGG | - | chr8_4:32634869-32634888 | Msa1323930:intron | 25.0% |
| ! | AAGTTCATGAACAAAATTGA+TGG | - | chr8_4:32635096-32635115 | Msa1323930:intron | 25.0% |
| ! | GAAAGTTGACATATCTAATA+TGG | - | chr8_4:32635286-32635305 | Msa1323930:intron | 25.0% |
| ! | ATATTGTGTGCTTGATTTAA+AGG | + | chr8_4:32635411-32635430 | None:intergenic | 25.0% |
| ! | TTAAATCAAGCACACAATAT+TGG | - | chr8_4:32635411-32635430 | Msa1323930:CDS | 25.0% |
| !! | TTGATTTTGAATATACTCAC+AGG | - | chr8_4:32635493-32635512 | Msa1323930:CDS | 25.0% |
| TATAGAGAGAGATATAGAGA+AGG | + | chr8_4:32630746-32630765 | None:intergenic | 30.0% | |
| GTGAAGTTATTCAGAACAAA+AGG | - | chr8_4:32630769-32630788 | Msa1323930:three_prime_UTR | 30.0% | |
| ACATCTTCAGAAGAAGAAAA+CGG | + | chr8_4:32631052-32631071 | None:intergenic | 30.0% | |
| ATATCATATAGGCACGTAAT+TGG | + | chr8_4:32631609-32631628 | None:intergenic | 30.0% | |
| GCGACTATACTATATCATAT+AGG | + | chr8_4:32631620-32631639 | None:intergenic | 30.0% | |
| ! | AAAGTATCATTCATGAGTGT+TGG | - | chr8_4:32631648-32631667 | Msa1323930:intron | 30.0% |
| AAGTATCATTCATGAGTGTT+GGG | - | chr8_4:32631649-32631668 | Msa1323930:intron | 30.0% | |
| ! | TTCCGTTTATGTTTGGAATT+TGG | - | chr8_4:32631776-32631795 | Msa1323930:intron | 30.0% |
| GTATATTCTGTTACTCACAA+GGG | + | chr8_4:32631835-32631854 | None:intergenic | 30.0% | |
| ! | TTAACAAAACGGACACTTTT+CGG | - | chr8_4:32631879-32631898 | Msa1323930:CDS | 30.0% |
| ! | TTTTCGGATTATGTATGTGT+CGG | - | chr8_4:32631895-32631914 | Msa1323930:CDS | 30.0% |
| ! | TAATCATATATGTTGGTGTC+AGG | + | chr8_4:32631941-32631960 | None:intergenic | 30.0% |
| TTAAAGTTAAAGGGTCTTAG+AGG | + | chr8_4:32632392-32632411 | None:intergenic | 30.0% | |
| TGCAGAATACTATAAACAAC+AGG | - | chr8_4:32632894-32632913 | Msa1323930:CDS | 30.0% | |
| AATACTATAAACAACAGGAG+AGG | - | chr8_4:32632899-32632918 | Msa1323930:CDS | 30.0% | |
| !!! | AAAATGGTTTGGTGTTTTCA+TGG | + | chr8_4:32633537-32633556 | None:intergenic | 30.0% |
| ATTGGATAGTGAAAATGGTT+TGG | + | chr8_4:32633548-32633567 | None:intergenic | 30.0% | |
| ! | AACCATTTTCACTATCCAAT+TGG | - | chr8_4:32633548-32633567 | Msa1323930:intron | 30.0% |
| TTCCAATTGGATAGTGAAAA+TGG | + | chr8_4:32633553-32633572 | None:intergenic | 30.0% | |
| ACTATCCAATTGGAAAGAAA+CGG | - | chr8_4:32633558-32633577 | Msa1323930:intron | 30.0% | |
| AAAACTTAAAGACTTACCAC+CGG | + | chr8_4:32633590-32633609 | None:intergenic | 30.0% | |
| !!! | TATGTTTTGGCGTTACATTA+CGG | + | chr8_4:32633787-32633806 | None:intergenic | 30.0% |
| !! | CTTTGTATCATTGATTTAGG+AGG | - | chr8_4:32633882-32633901 | Msa1323930:intron | 30.0% |
| ATGTTAAAGCGATAGAAAGT+TGG | - | chr8_4:32633906-32633925 | Msa1323930:intron | 30.0% | |
| ! | TTTTAATGATCTACTGTCGA+AGG | - | chr8_4:32634401-32634420 | Msa1323930:intron | 30.0% |
| GATGTTATTACCAATTCAGT+TGG | - | chr8_4:32634469-32634488 | Msa1323930:intron | 30.0% | |
| GATTTCAATTATTTGGATCG+TGG | - | chr8_4:32634652-32634671 | Msa1323930:intron | 30.0% | |
| ! | TTTTAAACAATCTCGACCAT+CGG | - | chr8_4:32634840-32634859 | Msa1323930:intron | 30.0% |
| ATAGCATAGACTAACGAAAT+AGG | - | chr8_4:32635019-32635038 | Msa1323930:intron | 30.0% | |
| GTTGTACACAATCAATACAT+GGG | - | chr8_4:32635200-32635219 | Msa1323930:intron | 30.0% | |
| GAGAATGTATCATCTCTAAT+CGG | - | chr8_4:32635237-32635256 | Msa1323930:intron | 30.0% | |
| !! | TGCTCATTATTTTGTTGAAG+TGG | - | chr8_4:32635362-32635381 | Msa1323930:CDS | 30.0% |
| ! | TGATTTAAAGGCATATCTTC+TGG | + | chr8_4:32635399-32635418 | None:intergenic | 30.0% |
| ACTATACTTACTGCTGTTAC+CGG | + | chr8_4:32631007-32631026 | None:intergenic | 35.0% | |
| GAAAACGGAGAAAGAAAGAA+AGG | + | chr8_4:32631037-32631056 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTGATTGTGTTGG+TGG | - | chr8_4:32631570-32631589 | Msa1323930:intron | 35.0% |
| !! | TGGTGATGGTGAGAATATTT+AGG | - | chr8_4:32631737-32631756 | Msa1323930:intron | 35.0% |
| GGTATATTCTGTTACTCACA+AGG | + | chr8_4:32631836-32631855 | None:intergenic | 35.0% | |
| GCTTCATACTTCTTAGCAAA+AGG | - | chr8_4:32632024-32632043 | Msa1323930:CDS | 35.0% | |
| !!! | TTCTTTTTTTTTGTGGCGGT+CGG | - | chr8_4:32632141-32632160 | Msa1323930:intron | 35.0% |
| GACAATGCATAATACATGCA+AGG | + | chr8_4:32632182-32632201 | None:intergenic | 35.0% | |
| !! | GAGTGTTTTTACCTCTAAAC+TGG | - | chr8_4:32632343-32632362 | Msa1323930:intron | 35.0% |
| !!! | TCGTTTTCAAGTAGGTAGTT+CGG | + | chr8_4:32632515-32632534 | None:intergenic | 35.0% |
| !!! | AGATAGTCTCGTTTTCAAGT+AGG | + | chr8_4:32632523-32632542 | None:intergenic | 35.0% |
| GAGAGAAGAATTTGTAACCA+AGG | - | chr8_4:32632645-32632664 | Msa1323930:intron | 35.0% | |
| !! | GCAAAAAATGAAAAGCACCT+TGG | + | chr8_4:32632665-32632684 | None:intergenic | 35.0% |
| GCACAGTTGTAGATAATACT+TGG | - | chr8_4:32632696-32632715 | Msa1323930:intron | 35.0% | |
| GACACATTTCAAAAACCAGT+TGG | + | chr8_4:32632736-32632755 | None:intergenic | 35.0% | |
| TCAATCTTGTCTTTGTGAAG+TGG | - | chr8_4:32632814-32632833 | Msa1323930:CDS | 35.0% | |
| ACTTGAAGGCTATAATGACA+TGG | - | chr8_4:32632924-32632943 | Msa1323930:CDS | 35.0% | |
| ATGGATACTATGACTGAAAC+AGG | - | chr8_4:32632943-32632962 | Msa1323930:CDS | 35.0% | |
| ! | TCGTGTTATTGATACCACAT+TGG | + | chr8_4:32633034-32633053 | None:intergenic | 35.0% |
| ATCAATAACACGACTGAAAC+AGG | - | chr8_4:32633041-32633060 | Msa1323930:intron | 35.0% | |
| ! | CCACATTTTCTACAAAACCA+AGG | + | chr8_4:32633069-32633088 | None:intergenic | 35.0% |
| !!! | CCTTGGTTTTGTAGAAAATG+TGG | - | chr8_4:32633066-32633085 | Msa1323930:intron | 35.0% |
| TGTGTCAAATGCAGTTAACT+TGG | - | chr8_4:32633391-32633410 | Msa1323930:CDS | 35.0% | |
| AAGATCCAAGAGAGAATCTA+GGG | + | chr8_4:32633480-32633499 | None:intergenic | 35.0% | |
| AAAGATCCAAGAGAGAATCT+AGG | + | chr8_4:32633481-32633500 | None:intergenic | 35.0% | |
| ! | TTCTCTCTTGGATCTTTTGT+CGG | - | chr8_4:32633484-32633503 | Msa1323930:intron | 35.0% |
| GCAATAGTACCGTATTAACA+CGG | - | chr8_4:32633647-32633666 | Msa1323930:intron | 35.0% | |
| TTTCATGAGCCGTGTTAATA+CGG | + | chr8_4:32633659-32633678 | None:intergenic | 35.0% | |
| AATGTAACGCCAAAACATAG+TGG | - | chr8_4:32633788-32633807 | Msa1323930:intron | 35.0% | |
| ATGTAACGCCAAAACATAGT+GGG | - | chr8_4:32633789-32633808 | Msa1323930:intron | 35.0% | |
| AGCTGTTGTTATGCTTATTG+CGG | + | chr8_4:32634014-32634033 | None:intergenic | 35.0% | |
| ! | TGACTTGAGACTTTTTATGC+AGG | - | chr8_4:32634102-32634121 | Msa1323930:intron | 35.0% |
| ! | GACTTGAGACTTTTTATGCA+GGG | - | chr8_4:32634103-32634122 | Msa1323930:intron | 35.0% |
| !!! | CATTGTTTTTGCATCAGTGA+TGG | - | chr8_4:32634129-32634148 | Msa1323930:intron | 35.0% |
| !! | TTGCAGATTTTGATCGAATC+TGG | - | chr8_4:32634163-32634182 | Msa1323930:intron | 35.0% |
| CAAGATTACAAGTAAGGTTC+AGG | + | chr8_4:32634269-32634288 | None:intergenic | 35.0% | |
| ! | TGAATCATAGTGAGTTGAGA+TGG | - | chr8_4:32634338-32634357 | Msa1323930:intron | 35.0% |
| ACTTGCACATAATTCCTCAA+GGG | - | chr8_4:32634624-32634643 | Msa1323930:intron | 35.0% | |
| ! | ATTGAAATCTAAGACCCTTG+AGG | + | chr8_4:32634641-32634660 | None:intergenic | 35.0% |
| TAGTAATTATGTGTGGGACA+CGG | - | chr8_4:32634736-32634755 | Msa1323930:intron | 35.0% | |
| !! | GATTATTGCGTGTTTTTGCA+AGG | + | chr8_4:32634765-32634784 | None:intergenic | 35.0% |
| AATCGTTAGAGACTACATGA+GGG | + | chr8_4:32634935-32634954 | None:intergenic | 35.0% | |
| ! | TATTCGTTATTTGTTACCGC+CGG | - | chr8_4:32635121-32635140 | Msa1323930:intron | 35.0% |
| TGTACAACGCTATCTACATA+CGG | + | chr8_4:32635188-32635207 | None:intergenic | 35.0% | |
| CGTTGTACACAATCAATACA+TGG | - | chr8_4:32635199-32635218 | Msa1323930:intron | 35.0% | |
| ATGTATCATCTCTAATCGGA+AGG | - | chr8_4:32635241-32635260 | Msa1323930:intron | 35.0% | |
| AACTTTCCTAGAAAATCAGG+TGG | + | chr8_4:32635273-32635292 | None:intergenic | 35.0% | |
| GTCAACTTTCCTAGAAAATC+AGG | + | chr8_4:32635276-32635295 | None:intergenic | 35.0% | |
| AATATGGAATCACCATGAAG+AGG | - | chr8_4:32635302-32635321 | Msa1323930:intron | 35.0% | |
| ACAAAAGCTCTTTCAACTTC+AGG | + | chr8_4:32635468-32635487 | None:intergenic | 35.0% | |
| TATACCATCATCTTGTGTTC+AGG | + | chr8_4:32635519-32635538 | None:intergenic | 35.0% | |
| TTCAACTCTCACACTTTCTC+CGG | + | chr8_4:32630851-32630870 | None:intergenic | 40.0% | |
| AACCTTCATCATCATCGTCA+TGG | - | chr8_4:32630869-32630888 | Msa1323930:CDS | 40.0% | |
| ! | TTCCATGACGATGATGATGA+AGG | + | chr8_4:32630874-32630893 | None:intergenic | 40.0% |
| GTCATGGAAACTGAATGTGA+AGG | - | chr8_4:32630885-32630904 | Msa1323930:CDS | 40.0% | |
| ! | TGATGATCATGGTGATGATG+TGG | + | chr8_4:32630922-32630941 | None:intergenic | 40.0% |
| ! | GATGGTGATGATGATGATCA+TGG | + | chr8_4:32630933-32630952 | None:intergenic | 40.0% |
| CTATACTTACTGCTGTTACC+GGG | + | chr8_4:32631006-32631025 | None:intergenic | 40.0% | |
| ACGGAGAAAGAAAGAAAGGA+GGG | + | chr8_4:32631033-32631052 | None:intergenic | 40.0% | |
| AACGGAGAAAGAAAGAAAGG+AGG | + | chr8_4:32631034-32631053 | None:intergenic | 40.0% | |
| CTATGAATGACACTAACACG+TGG | + | chr8_4:32631152-32631171 | None:intergenic | 40.0% | |
| ! | CACGTGTTAGTGTCATTCAT+AGG | - | chr8_4:32631150-32631169 | Msa1323930:CDS | 40.0% |
| ACACCTTCAGTATGAACTGT+TGG | + | chr8_4:32631432-32631451 | None:intergenic | 40.0% | |
| TTCACCATCATTGTTGTGTC+TGG | - | chr8_4:32631486-32631505 | Msa1323930:intron | 40.0% | |
| ATCATTGTTGTGTCTGGTGT+CGG | - | chr8_4:32631492-32631511 | Msa1323930:intron | 40.0% | |
| TAGGCACGTAATTGGTGAAA+AGG | + | chr8_4:32631601-32631620 | None:intergenic | 40.0% | |
| !! | ATCATTCATGAGTGTTGGGT+TGG | - | chr8_4:32631653-32631672 | Msa1323930:intron | 40.0% |
| ! | TTTTGCAGTCTTCTTGGTGA+TGG | - | chr8_4:32631723-32631742 | Msa1323930:intron | 40.0% |
| !!! | TCTTTTTTTTTGTGGCGGTC+GGG | - | chr8_4:32632142-32632161 | Msa1323930:intron | 40.0% |
| TGCATAATACATGCAAGGTC+CGG | + | chr8_4:32632177-32632196 | None:intergenic | 40.0% | |
| CTTAGAGGCTGATCTTCAAA+GGG | + | chr8_4:32632377-32632396 | None:intergenic | 40.0% | |
| TCTTAGAGGCTGATCTTCAA+AGG | + | chr8_4:32632378-32632397 | None:intergenic | 40.0% | |
| !! | CGTTGCTTCTCTGAAATCAA+AGG | + | chr8_4:32632868-32632887 | None:intergenic | 40.0% |
| !! | ACTGAAACAGGACTTTTTCC+AGG | - | chr8_4:32632955-32632974 | Msa1323930:CDS | 40.0% |
| TGTAGAAAATGTGGCCAATG+CGG | - | chr8_4:32633075-32633094 | Msa1323930:intron | 40.0% | |
| AACAGAAATTGCTTCCGCAT+TGG | + | chr8_4:32633092-32633111 | None:intergenic | 40.0% | |
| ATGTGAGCTCTATGATTCTC+AGG | - | chr8_4:32633325-32633344 | Msa1323930:intron | 40.0% | |
| CTTGGTACTATTTGCAGCAA+AGG | - | chr8_4:32633409-32633428 | Msa1323930:CDS | 40.0% | |
| ! | TCTCTCTTGGATCTTTTGTC+GGG | - | chr8_4:32633485-32633504 | Msa1323930:intron | 40.0% |
| ! | TTTTGTCGGGGTTCATATTG+TGG | - | chr8_4:32633498-32633517 | Msa1323930:intron | 40.0% |
| !!! | GTTTGGTGTTTTCATGGCAT+TGG | + | chr8_4:32633531-32633550 | None:intergenic | 40.0% |
| TGCATCCGTTTCTTTCCAAT+TGG | + | chr8_4:32633566-32633585 | None:intergenic | 40.0% | |
| TGATTTACAGCCACAACAGT+GGG | + | chr8_4:32633755-32633774 | None:intergenic | 40.0% | |
| ! | ATTGCAGGCATTGCCATTAT+GGG | + | chr8_4:32634043-32634062 | None:intergenic | 40.0% |
| ! | AATTGCAGGCATTGCCATTA+TGG | + | chr8_4:32634044-32634063 | None:intergenic | 40.0% |
| CCTGCAATTGTTATCTCAAC+CGG | - | chr8_4:32634055-32634074 | Msa1323930:intron | 40.0% | |
| GATCAAAATCTGCAATCCCA+AGG | + | chr8_4:32634158-32634177 | None:intergenic | 40.0% | |
| !! | AGATTTTGATCGAATCTGGC+AGG | - | chr8_4:32634167-32634186 | Msa1323930:intron | 40.0% |
| TGGCAGGCAAATTATTGCAA+AGG | - | chr8_4:32634183-32634202 | Msa1323930:intron | 40.0% | |
| AAAACAATGATCCTGCGCAT+AGG | + | chr8_4:32634449-32634468 | None:intergenic | 40.0% | |
| AGCAGCTAATCCAACTGAAT+TGG | + | chr8_4:32634482-32634501 | None:intergenic | 40.0% | |
| ! | TGTTGGCTGTCAAGTTCTAT+TGG | - | chr8_4:32634506-32634525 | Msa1323930:intron | 40.0% |
| ! | TATTGGTGGATCGATCCATT+GGG | - | chr8_4:32634523-32634542 | Msa1323930:intron | 40.0% |
| CTCACAATAATAGCTCCCAA+TGG | + | chr8_4:32634541-32634560 | None:intergenic | 40.0% | |
| GACTTGCACATAATTCCTCA+AGG | - | chr8_4:32634623-32634642 | Msa1323930:intron | 40.0% | |
| AACTGCTTTATCTAAGCCGA+TGG | + | chr8_4:32634859-32634878 | None:intergenic | 40.0% | |
| GACTACATGAGGGATAAAGT+AGG | + | chr8_4:32634925-32634944 | None:intergenic | 40.0% | |
| CAATCGTTAGAGACTACATG+AGG | + | chr8_4:32634936-32634955 | None:intergenic | 40.0% | |
| AGATCAATCATGAAACCGAC+CGG | + | chr8_4:32635143-32635162 | None:intergenic | 40.0% | |
| CTATGTGCTTAACCTCTTCA+TGG | + | chr8_4:32635317-32635336 | None:intergenic | 40.0% | |
| ! | ACTGTGAGAGCATACACATT+TGG | - | chr8_4:32635339-32635358 | Msa1323930:intron | 40.0% |
| ! | CACTCTCCGACATGTTTTAC+AGG | + | chr8_4:32630816-32630835 | None:intergenic | 45.0% |
| GTGGTTGACGGTTATGATGA+TGG | + | chr8_4:32630951-32630970 | None:intergenic | 45.0% | |
| AAGTGAAGGAACGTGGTTGA+CGG | + | chr8_4:32630963-32630982 | None:intergenic | 45.0% | |
| AACAAGGCCACTGAAAGTGA+AGG | + | chr8_4:32630977-32630996 | None:intergenic | 45.0% | |
| GGACCAACAGTTCATACTGA+AGG | - | chr8_4:32631426-32631445 | Msa1323930:intron | 45.0% | |
| GACACCAGACACAACAATGA+TGG | + | chr8_4:32631493-32631512 | None:intergenic | 45.0% | |
| ATCAATGTCCATGTCGTGTC+CGG | - | chr8_4:32631994-32632013 | Msa1323930:CDS | 45.0% | |
| GAAGTATGAAGCACAGACAC+CGG | + | chr8_4:32632016-32632035 | None:intergenic | 45.0% | |
| !!! | CTTTTTTTTTGTGGCGGTCG+GGG | - | chr8_4:32632143-32632162 | Msa1323930:intron | 45.0% |
| CATAATACATGCAAGGTCCG+GGG | + | chr8_4:32632175-32632194 | None:intergenic | 45.0% | |
| GCATAATACATGCAAGGTCC+GGG | + | chr8_4:32632176-32632195 | None:intergenic | 45.0% | |
| GGGAATATGCTCCAGTTTAG+AGG | + | chr8_4:32632357-32632376 | None:intergenic | 45.0% | |
| ! | GATCTAGCTTCTGAACCAAC+TGG | - | chr8_4:32632718-32632737 | Msa1323930:intron | 45.0% |
| TGATTTCAGAGAAGCAACGC+AGG | - | chr8_4:32632869-32632888 | Msa1323930:CDS | 45.0% | |
| GATTTCAGAGAAGCAACGCA+GGG | - | chr8_4:32632870-32632889 | Msa1323930:CDS | 45.0% | |
| ! | TTTTCCAGGAAGTCTTACCG+AGG | - | chr8_4:32632969-32632988 | Msa1323930:CDS | 45.0% |
| TTTACCTCGGTAAGACTTCC+TGG | + | chr8_4:32632976-32632995 | None:intergenic | 45.0% | |
| TATCACCATAATTGCGGTCG+CGG | - | chr8_4:32633002-32633021 | Msa1323930:CDS | 45.0% | |
| AGCAGCTAGCAAAAAGTGAG+AGG | - | chr8_4:32633357-32633376 | Msa1323930:intron | 45.0% | |
| TTCCACCCTAGATTCTCTCT+TGG | - | chr8_4:32633472-32633491 | Msa1323930:CDS | 45.0% | |
| ATCCAAGAGAGAATCTAGGG+TGG | + | chr8_4:32633477-32633496 | None:intergenic | 45.0% | |
| ! | CTCTCTTGGATCTTTTGTCG+GGG | - | chr8_4:32633486-32633505 | Msa1323930:intron | 45.0% |
| TGGGTGCAGCATCAATATTG+TGG | - | chr8_4:32633712-32633731 | Msa1323930:intron | 45.0% | |
| CAGCATCAATATTGTGGCAG+TGG | - | chr8_4:32633718-32633737 | Msa1323930:intron | 45.0% | |
| GTGATTTACAGCCACAACAG+TGG | + | chr8_4:32633756-32633775 | None:intergenic | 45.0% | |
| ! | GTGTTGCACCCACTATGTTT+TGG | + | chr8_4:32633800-32633819 | None:intergenic | 45.0% |
| AACAGCTCCAATGCCCATAA+TGG | - | chr8_4:32634027-32634046 | Msa1323930:intron | 45.0% | |
| CCGGTTGAGATAACAATTGC+AGG | + | chr8_4:32634058-32634077 | None:intergenic | 45.0% | |
| GATTGTAAAAGCCTATGCGC+AGG | - | chr8_4:32634435-32634454 | Msa1323930:intron | 45.0% | |
| TGGCTGTCAAGTTCTATTGG+TGG | - | chr8_4:32634509-32634528 | Msa1323930:intron | 45.0% | |
| ! | CTATTGGTGGATCGATCCAT+TGG | - | chr8_4:32634522-32634541 | Msa1323930:intron | 45.0% |
| ! | ACAGCACCACCTGATTTTCT+AGG | - | chr8_4:32635264-32635283 | Msa1323930:intron | 45.0% |
| AACTCTCACACTTTCTCCGG+TGG | + | chr8_4:32630848-32630867 | None:intergenic | 50.0% | |
| CCACTGAAAGTGAAGGAACG+TGG | + | chr8_4:32630970-32630989 | None:intergenic | 50.0% | |
| CCACGTTCCTTCACTTTCAG+TGG | - | chr8_4:32630967-32630986 | Msa1323930:CDS | 50.0% | |
| TGTTACCGGGTTTGCGAACA+AGG | + | chr8_4:32630993-32631012 | None:intergenic | 50.0% | |
| CCTTGTGTCTGTGTCTGACA+CGG | - | chr8_4:32631074-32631093 | Msa1323930:CDS | 50.0% | |
| CAACAGGAGAGGCTACTTGA+AGG | - | chr8_4:32632910-32632929 | Msa1323930:CDS | 50.0% | |
| AACAACCGCGACCGCAATTA+TGG | + | chr8_4:32633010-32633029 | None:intergenic | 50.0% | |
| TGGAAAGAAACGGATGCAGC+CGG | - | chr8_4:32633568-32633587 | Msa1323930:intron | 50.0% | |
| GGCATTGCCATTATGGGCAT+TGG | + | chr8_4:32634037-32634056 | None:intergenic | 50.0% | |
| TGCATCAGTGATGGCAACCT+TGG | - | chr8_4:32634138-32634157 | Msa1323930:intron | 50.0% | |
| GCATCAGTGATGGCAACCTT+GGG | - | chr8_4:32634139-32634158 | Msa1323930:intron | 50.0% | |
| GAGATGGATGATCGCGATCA+TGG | - | chr8_4:32634354-32634373 | Msa1323930:intron | 50.0% | |
| !! | TGGATTAGCTGCTGCTGTGT+TGG | - | chr8_4:32634489-32634508 | Msa1323930:intron | 50.0% |
| ! | CGTTATTTGTTACCGCCGGT+CGG | - | chr8_4:32635125-32635144 | Msa1323930:intron | 50.0% |
| TCAATCATGAAACCGACCGG+CGG | + | chr8_4:32635140-32635159 | None:intergenic | 50.0% | |
| CAGGCCTGAACACAAGATGA+TGG | - | chr8_4:32635512-32635531 | Msa1323930:CDS | 50.0% | |
| AACATGTCGGAGAGTGACCG+CGG | - | chr8_4:32630820-32630839 | Msa1323930:exon | 55.0% | |
| !! | AGTGGCCTTGTTCGCAAACC+CGG | - | chr8_4:32630985-32631004 | Msa1323930:CDS | 55.0% |
| CCGTGTCAGACACAGACACA+AGG | + | chr8_4:32631077-32631096 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr8_4:32632209-32632228 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr8_4:32632206-32632225 | Msa1323930:CDS | 55.0% | |
| TGAGCTAAGCTCACGAGGAC+AGG | - | chr8_4:32632211-32632230 | Msa1323930:CDS | 55.0% | |
| GGTCGCGGTTGTTACCAATG+TGG | - | chr8_4:32633017-32633036 | Msa1323930:intron | 55.0% | |
| CACGACTGAAACAGGCTCCT+TGG | - | chr8_4:32633049-32633068 | Msa1323930:intron | 55.0% | |
| AAAGAAACGGATGCAGCCGG+TGG | - | chr8_4:32633571-32633590 | Msa1323930:intron | 55.0% | |
| AGTAGCAGTGCCCACTGTTG+TGG | - | chr8_4:32633742-32633761 | Msa1323930:intron | 55.0% | |
| CACAGACACCGGACACGACA+TGG | + | chr8_4:32632005-32632024 | None:intergenic | 60.0% | |
| CACTTTCTCCGGTGGCGCCG+CGG | + | chr8_4:32630840-32630859 | None:intergenic | 70.0% | |
| GGCGGTCGGGGTTTGAACCC+CGG | - | chr8_4:32632155-32632174 | Msa1323930:intron | 70.0% | |
| GAGAGTGACCGCGGCGCCAC+CGG | - | chr8_4:32630829-32630848 | Msa1323930:exon | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 32630710 | 32635659 | 32630710 | ID=Msa1323930;Name=Msa1323930 |
| chr8_4 | mRNA | 32630710 | 32635659 | 32630710 | ID=Msa1323930-mRNA-1;Parent=Msa1323930;Name=Msa1323930-mRNA-1;_AED=0.11;_eAED=0.11;_QI=113|0.8|0.83|1|1|1|6|120|402 |
| chr8_4 | exon | 32630710 | 32631174 | 32630710 | ID=Msa1323930-mRNA-1:exon:10679;Parent=Msa1323930-mRNA-1 |
| chr8_4 | exon | 32631814 | 32632044 | 32631814 | ID=Msa1323930-mRNA-1:exon:10678;Parent=Msa1323930-mRNA-1 |
| chr8_4 | exon | 32632165 | 32632245 | 32632165 | ID=Msa1323930-mRNA-1:exon:10677;Parent=Msa1323930-mRNA-1 |
| chr8_4 | exon | 32632777 | 32633022 | 32632777 | ID=Msa1323930-mRNA-1:exon:10676;Parent=Msa1323930-mRNA-1 |
| chr8_4 | exon | 32633379 | 32633491 | 32633379 | ID=Msa1323930-mRNA-1:exon:10675;Parent=Msa1323930-mRNA-1 |
| chr8_4 | exon | 32635354 | 32635659 | 32635354 | ID=Msa1323930-mRNA-1:exon:10674;Parent=Msa1323930-mRNA-1 |
| chr8_4 | five_prime_UTR | 32635547 | 32635659 | 32635547 | ID=Msa1323930-mRNA-1:five_prime_utr;Parent=Msa1323930-mRNA-1 |
| chr8_4 | CDS | 32635354 | 32635546 | 32635354 | ID=Msa1323930-mRNA-1:cds;Parent=Msa1323930-mRNA-1 |
| chr8_4 | CDS | 32633379 | 32633491 | 32633379 | ID=Msa1323930-mRNA-1:cds;Parent=Msa1323930-mRNA-1 |
| chr8_4 | CDS | 32632777 | 32633022 | 32632777 | ID=Msa1323930-mRNA-1:cds;Parent=Msa1323930-mRNA-1 |
| chr8_4 | CDS | 32632165 | 32632245 | 32632165 | ID=Msa1323930-mRNA-1:cds;Parent=Msa1323930-mRNA-1 |
| chr8_4 | CDS | 32631814 | 32632044 | 32631814 | ID=Msa1323930-mRNA-1:cds;Parent=Msa1323930-mRNA-1 |
| chr8_4 | CDS | 32630830 | 32631174 | 32630830 | ID=Msa1323930-mRNA-1:cds;Parent=Msa1323930-mRNA-1 |
| chr8_4 | three_prime_UTR | 32630710 | 32630829 | 32630710 | ID=Msa1323930-mRNA-1:three_prime_utr;Parent=Msa1323930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
