Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330330 | XP_003610013.2 | 97.046 | 237 | 7 | 0 | 1 | 237 | 1 | 237 | 3.72e-165 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330330 | G7JT86 | 97.046 | 237 | 7 | 0 | 1 | 237 | 1 | 237 | 1.78e-165 | 465 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1330310 | Msa1330330 | 0.809965 | 1.457880e-50 | -8.615850e-47 |
| Msa1220520 | Msa1330330 | 0.970680 | 5.492682e-132 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330330 | MtrunA17_Chr4g0071451 | 97.046 | 237 | 7 | 0 | 1 | 237 | 1 | 237 | 3.43e-169 | 465 |
| Msa1330330 | MtrunA17_Chr8g0347011 | 96.203 | 237 | 9 | 0 | 1 | 237 | 1 | 237 | 3.74e-168 | 463 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330330 | AT3G55600.2 | 62.963 | 243 | 80 | 3 | 1 | 237 | 2 | 240 | 2.90e-102 | 296 |
| Msa1330330 | AT3G55600.1 | 62.963 | 243 | 80 | 3 | 1 | 237 | 2 | 240 | 2.90e-102 | 296 |
| Msa1330330 | AT1G54110.1 | 60.000 | 240 | 89 | 3 | 1 | 237 | 1 | 236 | 5.75e-95 | 278 |
| Msa1330330 | AT1G54110.3 | 60.000 | 240 | 89 | 3 | 1 | 237 | 7 | 242 | 7.27e-95 | 278 |
| Msa1330330 | AT1G54110.2 | 54.202 | 238 | 100 | 4 | 3 | 237 | 13 | 244 | 1.79e-77 | 234 |
Find 66 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGATGTCGCCTTCTTC+TGG | 0.173787 | 8_4:-49458598 | Msa1330330:CDS |
| TGAAGCCATTGCTTCAAAAT+TGG | 0.262052 | 8_4:-49459646 | Msa1330330:CDS |
| TGATGCAGACGCCGAACTTT+TGG | 0.269321 | 8_4:+49464595 | None:intergenic |
| TACTACCTTGGCAAGCCTTC+TGG | 0.276682 | 8_4:+49461238 | None:intergenic |
| ACCAAGTCAACTTTGCTAAA+TGG | 0.292355 | 8_4:-49463969 | Msa1330330:five_prime_UTR |
| CTTCTTCTGGGCTGCGAAGA+AGG | 0.325263 | 8_4:-49458585 | Msa1330330:CDS |
| GTGTACTAACCAATCGATTC+AGG | 0.337979 | 8_4:+49464554 | None:intergenic |
| TCACTTATCATCTGTTAAAC+TGG | 0.344207 | 8_4:-49458429 | Msa1330330:CDS |
| TGCTGATGTCGCCTTCTTCT+GGG | 0.346601 | 8_4:-49458597 | Msa1330330:CDS |
| GTCGCGACCAGCAGCCTCTC+TGG | 0.421924 | 8_4:-49464719 | Msa1330330:five_prime_UTR |
| AGGGTGCAGTAAACATTTGA+TGG | 0.429280 | 8_4:-49457421 | Msa1330330:three_prime_UTR |
| GCGTGAACAACTGGAACAAT+TGG | 0.438147 | 8_4:-49461275 | Msa1330330:CDS |
| TAGACGGAGCGGTGGGGCGG+AGG | 0.456905 | 8_4:+49464679 | None:intergenic |
| AGAAAACCCTTCTGAAATTG+AGG | 0.459395 | 8_4:-49458626 | Msa1330330:CDS |
| AGTATATTGTGTTTGCTCGC+AGG | 0.463926 | 8_4:+49457537 | None:intergenic |
| TCCACACCATTCCAAAAGTT+CGG | 0.464743 | 8_4:-49464606 | Msa1330330:five_prime_UTR |
| GCCATTTAGCAAAGTTGACT+TGG | 0.467047 | 8_4:+49463968 | None:intergenic |
| TGCTTCAAAATTGGTTCATG+TGG | 0.472890 | 8_4:-49459637 | Msa1330330:intron |
| CTTCTTCGCAGCCCAGAAGA+AGG | 0.492425 | 8_4:+49458586 | None:intergenic |
| CCACGTTAAGCAAGAAGTCT+TGG | 0.493700 | 8_4:+49457505 | None:intergenic |
| ATCGATTCAGGAGAGGAGAT+TGG | 0.501203 | 8_4:+49464566 | None:intergenic |
| TGCTCCTCAGCAGCAAAACC+AGG | 0.505102 | 8_4:-49461696 | Msa1330330:CDS |
| GCTTGCCAAGCTATGCTCAA+TGG | 0.532851 | 8_4:+49457574 | None:intergenic |
| GGGTGCAGTAAACATTTGAT+GGG | 0.535273 | 8_4:-49457420 | Msa1330330:three_prime_UTR |
| TAACAAAGCCCCGGAAAACA+TGG | 0.537258 | 8_4:+49464008 | None:intergenic |
| GAGCATAGCTTGGCAAGCAC+AGG | 0.538157 | 8_4:-49457569 | Msa1330330:CDS |
| GCGGGCGCCAGAGAGGCTGC+TGG | 0.544731 | 8_4:+49464712 | None:intergenic |
| CAGTGAGAGATATGAAAATG+AGG | 0.550656 | 8_4:+49464741 | None:intergenic |
| TGCTCTATCTTCAGTACTTG+AGG | 0.552347 | 8_4:+49458472 | None:intergenic |
| GATACTTGATTCTACTGAAG+AGG | 0.553536 | 8_4:-49457597 | Msa1330330:CDS |
| GATAAGTGATCAGTCTCAGC+AGG | 0.554858 | 8_4:+49458443 | None:intergenic |
| ATCTCCTCTCCTGAATCGAT+TGG | 0.559221 | 8_4:-49464563 | Msa1330330:intron |
| GACAGATGAGATGGTGGTGT+TGG | 0.559370 | 8_4:-49457900 | Msa1330330:CDS |
| TCTGTTAAACTGGATGCTGC+AGG | 0.560208 | 8_4:-49458419 | Msa1330330:CDS |
| TTACATGTACAAGTTTAGCC+TGG | 0.563441 | 8_4:+49461678 | None:intergenic |
| AAAACATGGACATAGTCTCT+TGG | 0.564899 | 8_4:+49464022 | None:intergenic |
| AAATTTAATTACTTCAAACA+TGG | 0.568305 | 8_4:-49457395 | Msa1330330:three_prime_UTR |
| TGAACAACTGGAACAATTGG+CGG | 0.570170 | 8_4:-49461272 | Msa1330330:CDS |
| CCAAGACTTCTTGCTTAACG+TGG | 0.570482 | 8_4:-49457505 | Msa1330330:CDS |
| GTGGGGCGGAGGAGAATGTA+CGG | 0.580913 | 8_4:+49464690 | None:intergenic |
| GGCGGAGGAGAATGTACGGC+GGG | 0.584041 | 8_4:+49464694 | None:intergenic |
| GGGCGGAGGAGAATGTACGG+CGG | 0.590137 | 8_4:+49464693 | None:intergenic |
| GTTGTGGCATTGAGAAAAGA+AGG | 0.590220 | 8_4:+49463915 | None:intergenic |
| AGAGGCCATTGAGCATAGCT+TGG | 0.591713 | 8_4:-49457579 | Msa1330330:CDS |
| CAAACATGGCTATTTCCAGA+TGG | 0.592776 | 8_4:-49457381 | Msa1330330:three_prime_UTR |
| AGACTCCAGAAGGCTTGCCA+AGG | 0.593046 | 8_4:-49461243 | Msa1330330:intron |
| TCAGTTAAATAACAAAGCCC+CGG | 0.593528 | 8_4:+49463999 | None:intergenic |
| AGATGATTTGACAGATGAGA+TGG | 0.602130 | 8_4:-49457909 | Msa1330330:CDS |
| AGTGAGAGATATGAAAATGA+GGG | 0.611882 | 8_4:+49464742 | None:intergenic |
| TTGGAATGGTGTGGAGATTG+CGG | 0.613427 | 8_4:+49464614 | None:intergenic |
| TACCTAGTGATAAATTGTTG+TGG | 0.614464 | 8_4:+49463899 | None:intergenic |
| TGCCACAACAATTTATCACT+AGG | 0.618552 | 8_4:-49463901 | Msa1330330:intron |
| ATGCACATATTGAAAAGCAC+AGG | 0.619406 | 8_4:-49458394 | Msa1330330:intron |
| AATGACGTGTGTGTTTGTCA+TGG | 0.621037 | 8_4:-49457468 | Msa1330330:CDS |
| GTCTGACATAGAAGTATCTG+AGG | 0.623731 | 8_4:-49458668 | Msa1330330:CDS |
| GCGAGCAAACACAATATACT+CGG | 0.624966 | 8_4:-49457534 | Msa1330330:CDS |
| GCGGAAGAGAAGACTCCAGA+AGG | 0.629342 | 8_4:-49461253 | Msa1330330:CDS |
| TTGGTCATGCAGGATCTCAA+AGG | 0.635210 | 8_4:-49459697 | Msa1330330:intron |
| TGATTTGACAGATGAGATGG+TGG | 0.641860 | 8_4:-49457906 | Msa1330330:CDS |
| AGCGAGTTAGAAGATTGTTG+TGG | 0.644501 | 8_4:+49464643 | None:intergenic |
| TTACTGCACCCTATGTGACA+CGG | 0.647866 | 8_4:+49457432 | None:intergenic |
| GAGTTAGAAGATTGTTGTGG+TGG | 0.674092 | 8_4:+49464646 | None:intergenic |
| GAATGGTGTGGAGATTGCGG+TGG | 0.675122 | 8_4:+49464617 | None:intergenic |
| CTAACCAATCGATTCAGGAG+AGG | 0.698723 | 8_4:+49464559 | None:intergenic |
| GGTGCAGTAAACATTTGATG+GGG | 0.704653 | 8_4:-49457419 | Msa1330330:three_prime_UTR |
| GTGGCATTGAGAAAAGAAGG+TGG | 0.708992 | 8_4:+49463918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATATATTCAATTTG+TGG | - | chr8_4:49457538-49457557 | Msa1330330:CDS | 10.0% |
| !! | GATATATGAATTATTATTTA+TGG | - | chr8_4:49460184-49460203 | Msa1330330:intron | 10.0% |
| !!! | TTATATTTTGAATTTTTAAC+AGG | + | chr8_4:49460978-49460997 | None:intergenic | 10.0% |
| !! | GTTAAAAATTCAAAATATAA+AGG | - | chr8_4:49460978-49460997 | Msa1330330:intron | 10.0% |
| !! | AGTGTATATAAAATATTTAA+TGG | - | chr8_4:49463149-49463168 | Msa1330330:intron | 10.0% |
| !! | ATAGTTATTAGAGATAATTA+TGG | + | chr8_4:49457650-49457669 | None:intergenic | 15.0% |
| !!! | AGTTGTAATTGTTTTATTTA+GGG | - | chr8_4:49458359-49458378 | Msa1330330:intron | 15.0% |
| !! | AAACTATATGGTAAAATAAA+AGG | + | chr8_4:49458435-49458454 | None:intergenic | 15.0% |
| !!! | TTTACCAACTAAATTTTTTA+GGG | + | chr8_4:49458577-49458596 | None:intergenic | 15.0% |
| !!! | ATTTACCAACTAAATTTTTT+AGG | + | chr8_4:49458578-49458597 | None:intergenic | 15.0% |
| !!! | ATATTGCGTTTTTATTTTTT+AGG | - | chr8_4:49459269-49459288 | Msa1330330:intron | 15.0% |
| !!! | TATTGCGTTTTTATTTTTTA+GGG | - | chr8_4:49459270-49459289 | Msa1330330:intron | 15.0% |
| !! | ATAAATATCAAGGAATTATA+AGG | - | chr8_4:49460782-49460801 | Msa1330330:intron | 15.0% |
| !! | TAAATATCAAGGAATTATAA+GGG | - | chr8_4:49460783-49460802 | Msa1330330:intron | 15.0% |
| !! | AGAATCTAAATTAAAAAACT+AGG | - | chr8_4:49461035-49461054 | Msa1330330:intron | 15.0% |
| !! | AAATTCATAATAGATATCTA+TGG | + | chr8_4:49461129-49461148 | None:intergenic | 15.0% |
| !! | GAAAAGATTTCATTAAATAT+AGG | - | chr8_4:49462022-49462041 | Msa1330330:intron | 15.0% |
| !! | AATATATAAAAAGGAAACAA+TGG | + | chr8_4:49463227-49463246 | None:intergenic | 15.0% |
| !! | CTAAAATGGAATATATAAAA+AGG | + | chr8_4:49463236-49463255 | None:intergenic | 15.0% |
| !!! | TATATATTCCATTTTAGTTT+TGG | - | chr8_4:49463239-49463258 | Msa1330330:intron | 15.0% |
| !!! | GAAATTTAAAGGATTTTTTT+TGG | - | chr8_4:49463713-49463732 | Msa1330330:intron | 15.0% |
| !! | TTAATTAACCTAATAAATGA+TGG | - | chr8_4:49464340-49464359 | Msa1330330:intron | 15.0% |
| !! | AAATTTAATTACTTCAAACA+TGG | - | chr8_4:49464575-49464594 | Msa1330330:five_prime_UTR | 15.0% |
| !! | TTAGTACACTACTATTAATT+AGG | - | chr8_4:49457430-49457449 | Msa1330330:exon | 20.0% |
| !! | TAGTACACTACTATTAATTA+GGG | - | chr8_4:49457431-49457450 | Msa1330330:exon | 20.0% |
| !! | ATGTATGTGTTAAATTGTAA+TGG | - | chr8_4:49457580-49457599 | Msa1330330:CDS | 20.0% |
| !! | TGTATGTGTTAAATTGTAAT+GGG | - | chr8_4:49457581-49457600 | Msa1330330:CDS | 20.0% |
| !! | TAAATTGAAAATTACACATG+TGG | - | chr8_4:49458239-49458258 | Msa1330330:intron | 20.0% |
| !!! | GAGTTGTAATTGTTTTATTT+AGG | - | chr8_4:49458358-49458377 | Msa1330330:intron | 20.0% |
| !!! | GTTGTAATTGTTTTATTTAG+GGG | - | chr8_4:49458360-49458379 | Msa1330330:intron | 20.0% |
| !!! | TTGTAATTGTTTTATTTAGG+GGG | - | chr8_4:49458361-49458380 | Msa1330330:intron | 20.0% |
| !! | AATGCAATCATTAAACTATA+TGG | + | chr8_4:49458447-49458466 | None:intergenic | 20.0% |
| !! | TCTCATATACATAAATATCA+AGG | - | chr8_4:49460772-49460791 | Msa1330330:intron | 20.0% |
| !!! | ATTTTGAATTTTTAACAGGT+TGG | + | chr8_4:49460974-49460993 | None:intergenic | 20.0% |
| !! | TTCAAAATATAAAGGAGTAA+AGG | - | chr8_4:49460986-49461005 | Msa1330330:intron | 20.0% |
| !!! | GAATTAATGATTAGTTCTTT+AGG | + | chr8_4:49461074-49461093 | None:intergenic | 20.0% |
| !! | GAAAAACATAAAACAAAATG+TGG | + | chr8_4:49461413-49461432 | None:intergenic | 20.0% |
| !! | TTTGTTGAAGAAATGATATT+TGG | - | chr8_4:49461538-49461557 | Msa1330330:intron | 20.0% |
| !! | AAATGTTAAGAATTAATACC+TGG | - | chr8_4:49461972-49461991 | Msa1330330:intron | 20.0% |
| !! | TTCTCAAAGAATTAAAAACA+AGG | + | chr8_4:49462105-49462124 | None:intergenic | 20.0% |
| !!! | CTAACTTACAACAATTTTTT+TGG | + | chr8_4:49462528-49462547 | None:intergenic | 20.0% |
| !!! | ATAAATATGCTCATTTTGAT+AGG | - | chr8_4:49462804-49462823 | Msa1330330:intron | 20.0% |
| !! | CATCATATAACAAATCATTA+AGG | + | chr8_4:49463093-49463112 | None:intergenic | 20.0% |
| !!! | CTTAATGATTTGTTATATGA+TGG | - | chr8_4:49463091-49463110 | Msa1330330:intron | 20.0% |
| !!! | TGTTTTTAAGAAATTTGCAT+AGG | + | chr8_4:49463675-49463694 | None:intergenic | 20.0% |
| !! | ATTTGCATTCAGAAATTTAA+AGG | - | chr8_4:49463702-49463721 | Msa1330330:intron | 20.0% |
| !!! | ATTTTTTTTGGTCAATCATT+GGG | - | chr8_4:49463725-49463744 | Msa1330330:intron | 20.0% |
| !! | AAACAATTCATATGGTTAAA+AGG | + | chr8_4:49463978-49463997 | None:intergenic | 20.0% |
| !!! | TTATATCTTGCAGTTTTTTT+TGG | - | chr8_4:49464681-49464700 | Msa1330330:five_prime_UTR | 20.0% |
| !!! | TATATCTTGCAGTTTTTTTT+GGG | - | chr8_4:49464682-49464701 | Msa1330330:five_prime_UTR | 20.0% |
| !!! | TAATTAGGGTTTTAGTCAAA+CGG | - | chr8_4:49457445-49457464 | Msa1330330:CDS | 25.0% |
| !!! | TTTAGGGTTATTTTCATAGT+TGG | - | chr8_4:49457484-49457503 | Msa1330330:CDS | 25.0% |
| ! | AACACATACATATTCAAAAC+TGG | + | chr8_4:49457571-49457590 | None:intergenic | 25.0% |
| ! | GTTGCATAAGTTTGAATATA+TGG | - | chr8_4:49457734-49457753 | Msa1330330:intron | 25.0% |
| !!! | GAATTAGTTTGTATTAGTTC+AGG | - | chr8_4:49457761-49457780 | Msa1330330:intron | 25.0% |
| !! | TAATTAAAGCATTACACATG+TGG | - | chr8_4:49458200-49458219 | Msa1330330:intron | 25.0% |
| ! | AGAAATTGATGCTATTACTT+AGG | - | chr8_4:49458479-49458498 | Msa1330330:CDS | 25.0% |
| ! | AGTTCCCTAAAAAATTTAGT+TGG | - | chr8_4:49458570-49458589 | Msa1330330:intron | 25.0% |
| ! | AGCGCTATAGAATATAATAA+AGG | - | chr8_4:49458786-49458805 | Msa1330330:intron | 25.0% |
| !!! | CAGACGATAAATTTTTTTTG+TGG | - | chr8_4:49458954-49458973 | Msa1330330:intron | 25.0% |
| !! | ATTTTATCATCTTCTGATTG+AGG | + | chr8_4:49459160-49459179 | None:intergenic | 25.0% |
| ! | TTCTACTCCTATAGTAAAAA+TGG | + | chr8_4:49459297-49459316 | None:intergenic | 25.0% |
| ! | TGTGGGTAAATAGATAATTT+CGG | - | chr8_4:49459466-49459485 | Msa1330330:intron | 25.0% |
| ! | TTATTTGTACCTTTGAATTG+AGG | - | chr8_4:49459534-49459553 | Msa1330330:intron | 25.0% |
| ! | TATTTGTACCTTTGAATTGA+GGG | - | chr8_4:49459535-49459554 | Msa1330330:intron | 25.0% |
| !!! | TGATTTTAGTGATTAGCAAT+TGG | + | chr8_4:49459817-49459836 | None:intergenic | 25.0% |
| ! | AATTGCTAATCACTAAAATC+AGG | - | chr8_4:49459816-49459835 | Msa1330330:intron | 25.0% |
| ! | ATTGCTAATCACTAAAATCA+GGG | - | chr8_4:49459817-49459836 | Msa1330330:intron | 25.0% |
| ! | AATAGCATATATGAAGTTAG+TGG | - | chr8_4:49459930-49459949 | Msa1330330:intron | 25.0% |
| ! | TTCATATATCATCATAACCA+AGG | + | chr8_4:49460174-49460193 | None:intergenic | 25.0% |
| ! | TACTCTACAATAAATAGTCA+GGG | + | chr8_4:49460331-49460350 | None:intergenic | 25.0% |
| ! | TTACTCTACAATAAATAGTC+AGG | + | chr8_4:49460332-49460351 | None:intergenic | 25.0% |
| ! | ACCAACATAAACCTAAAATA+AGG | + | chr8_4:49460546-49460565 | None:intergenic | 25.0% |
| !!! | AGAATTAACAGCTTTAAAGA+TGG | + | chr8_4:49460843-49460862 | None:intergenic | 25.0% |
| ! | AAATATAAAGGAGTAAAGGA+AGG | - | chr8_4:49460990-49461009 | Msa1330330:intron | 25.0% |
| ! | AATATAAAGGAGTAAAGGAA+GGG | - | chr8_4:49460991-49461010 | Msa1330330:intron | 25.0% |
| ! | CAAGAATTTCAAAATTAGCT+AGG | - | chr8_4:49461165-49461184 | Msa1330330:intron | 25.0% |
| ! | AGTTGGCAGAAATTTAATAA+AGG | + | chr8_4:49461279-49461298 | None:intergenic | 25.0% |
| ! | AAAGAATTCTTGACAAATCA+GGG | + | chr8_4:49461321-49461340 | None:intergenic | 25.0% |
| ! | AAAAGAATTCTTGACAAATC+AGG | + | chr8_4:49461322-49461341 | None:intergenic | 25.0% |
| ! | TCTTAACGCAATATATGTAA+TGG | + | chr8_4:49461591-49461610 | None:intergenic | 25.0% |
| ! | TTTGAAAGAAGAAGCTTAAA+TGG | + | chr8_4:49461754-49461773 | None:intergenic | 25.0% |
| ! | GTGAAGAATAGATTTCTAAA+CGG | + | chr8_4:49461780-49461799 | None:intergenic | 25.0% |
| !! | TTAATACCTGGTGAAATTTT+AGG | - | chr8_4:49461984-49462003 | Msa1330330:intron | 25.0% |
| !! | TAATACCTGGTGAAATTTTA+GGG | - | chr8_4:49461985-49462004 | Msa1330330:intron | 25.0% |
| !!! | GTGAAATTTTAGGGATTAAA+TGG | - | chr8_4:49461994-49462013 | Msa1330330:intron | 25.0% |
| ! | TTAGAGATATTGAAATGCAA+AGG | - | chr8_4:49462381-49462400 | Msa1330330:intron | 25.0% |
| ! | TAGAGATATTGAAATGCAAA+GGG | - | chr8_4:49462382-49462401 | Msa1330330:intron | 25.0% |
| !!! | AACAATTTTTTTGGCTGAAA+AGG | + | chr8_4:49462519-49462538 | None:intergenic | 25.0% |
| ! | AATACTTTGTACTAACTGAA+AGG | - | chr8_4:49462649-49462668 | Msa1330330:intron | 25.0% |
| ! | ACAAATCATTAAGGTTTGAT+TGG | + | chr8_4:49463084-49463103 | None:intergenic | 25.0% |
| ! | TATTTAATGGCTTGACTTAT+TGG | - | chr8_4:49463162-49463181 | Msa1330330:intron | 25.0% |
| ! | TTGACTTATTGGTATTTGAT+TGG | - | chr8_4:49463173-49463192 | Msa1330330:intron | 25.0% |
| ! | ATATAAAAAGGAAACAATGG+AGG | + | chr8_4:49463224-49463243 | None:intergenic | 25.0% |
| ! | CTATTTAGCCAAAACTAAAA+TGG | + | chr8_4:49463250-49463269 | None:intergenic | 25.0% |
| !!! | CATTTTAGTTTTGGCTAAAT+AGG | - | chr8_4:49463248-49463267 | Msa1330330:intron | 25.0% |
| ! | TGTCAGACTGAAAATTTAAA+TGG | + | chr8_4:49463290-49463309 | None:intergenic | 25.0% |
| !! | TTTTATCCTCAATTTCAGAA+GGG | + | chr8_4:49463353-49463372 | None:intergenic | 25.0% |
| !! | ATTTTATCCTCAATTTCAGA+AGG | + | chr8_4:49463354-49463373 | None:intergenic | 25.0% |
| !!! | GATTTTTTTTGGTCAATCAT+TGG | - | chr8_4:49463724-49463743 | Msa1330330:intron | 25.0% |
| ! | TCATTGGGTTATTATATTGT+TGG | - | chr8_4:49463740-49463759 | Msa1330330:intron | 25.0% |
| ! | CAATACTATTCAGTAACATT+TGG | + | chr8_4:49463780-49463799 | None:intergenic | 25.0% |
| !! | TGAATAGTATTGAACTACTA+GGG | - | chr8_4:49463788-49463807 | Msa1330330:intron | 25.0% |
| ! | CAGCAAAAAAACAATTCATA+TGG | + | chr8_4:49463986-49464005 | None:intergenic | 25.0% |
| ! | TAGAAGAAAAATTTACCATC+TGG | + | chr8_4:49464607-49464626 | None:intergenic | 25.0% |
| AGTGAGAGATATGAAAATGA+GGG | + | chr8_4:49457231-49457250 | None:intergenic | 30.0% | |
| !!! | AATCTGGGGGTTTTATTTTA+GGG | - | chr8_4:49457468-49457487 | Msa1330330:CDS | 30.0% |
| ! | CAACACATAAATTGATTCTC+TGG | + | chr8_4:49457512-49457531 | None:intergenic | 30.0% |
| TCAAACTTATGCAACTAACA+GGG | + | chr8_4:49457729-49457748 | None:intergenic | 30.0% | |
| TTCAAACTTATGCAACTAAC+AGG | + | chr8_4:49457730-49457749 | None:intergenic | 30.0% | |
| !! | GTATTAGTTCAGGTTTTTAC+TGG | - | chr8_4:49457771-49457790 | Msa1330330:intron | 30.0% |
| ! | TTTTCTGTCTGAGTTTAATC+AGG | + | chr8_4:49457797-49457816 | None:intergenic | 30.0% |
| ATTAAACTCAGACAGAAAAC+TGG | - | chr8_4:49457798-49457817 | Msa1330330:intron | 30.0% | |
| !!! | GTGTCATTTTGTGGAAAATA+TGG | + | chr8_4:49457892-49457911 | None:intergenic | 30.0% |
| !!! | AGTTATTCTGTGTCATTTTG+TGG | + | chr8_4:49457901-49457920 | None:intergenic | 30.0% |
| TACCTAGTGATAAATTGTTG+TGG | + | chr8_4:49458074-49458093 | None:intergenic | 30.0% | |
| ! | AAAAGGCTTAATAGCAGTTT+TGG | + | chr8_4:49458418-49458437 | None:intergenic | 30.0% |
| ! | TTGTACAATTGTTATTGCTC+TGG | - | chr8_4:49458812-49458831 | Msa1330330:intron | 30.0% |
| ! | TTGTCAAATAGTTGCTATTG+CGG | - | chr8_4:49458858-49458877 | Msa1330330:intron | 30.0% |
| TCATAGATGGTGAAAAATAG+TGG | + | chr8_4:49458896-49458915 | None:intergenic | 30.0% | |
| AAAATTCTTTACTTACCCCA+TGG | + | chr8_4:49458986-49459005 | None:intergenic | 30.0% | |
| TAATGAGTCAGTAGTTCATA+GGG | + | chr8_4:49459204-49459223 | None:intergenic | 30.0% | |
| ATAATGAGTCAGTAGTTCAT+AGG | + | chr8_4:49459205-49459224 | None:intergenic | 30.0% | |
| CGCAATATATTTACGACATA+GGG | + | chr8_4:49459257-49459276 | None:intergenic | 30.0% | |
| ACGCAATATATTTACGACAT+AGG | + | chr8_4:49459258-49459277 | None:intergenic | 30.0% | |
| !! | TTAGGGTCCATTTTTACTAT+AGG | - | chr8_4:49459287-49459306 | Msa1330330:intron | 30.0% |
| AGTAGAACATCCAATTTGAT+TGG | - | chr8_4:49459310-49459329 | Msa1330330:intron | 30.0% | |
| GTAGAACATCCAATTTGATT+GGG | - | chr8_4:49459311-49459330 | Msa1330330:intron | 30.0% | |
| GCTAAAGACAATATATATCC+TGG | + | chr8_4:49459347-49459366 | None:intergenic | 30.0% | |
| AATGAGAAAAGACATCACAT+TGG | + | chr8_4:49459374-49459393 | None:intergenic | 30.0% | |
| GTGGGTAAATAGATAATTTC+GGG | - | chr8_4:49459467-49459486 | Msa1330330:intron | 30.0% | |
| TGGGTAAATAGATAATTTCG+GGG | - | chr8_4:49459468-49459487 | Msa1330330:intron | 30.0% | |
| AAGAAAATTGCTCTTTAAGC+AGG | + | chr8_4:49459513-49459532 | None:intergenic | 30.0% | |
| GTTTGCGTAATTTCTTTCTT+CGG | + | chr8_4:49459609-49459628 | None:intergenic | 30.0% | |
| AACGAGAAATGCAAAACAAA+AGG | - | chr8_4:49459626-49459645 | Msa1330330:intron | 30.0% | |
| ACGAGAAATGCAAAACAAAA+GGG | - | chr8_4:49459627-49459646 | Msa1330330:intron | 30.0% | |
| CTAACATAGAGAATTAGTCA+TGG | - | chr8_4:49459904-49459923 | Msa1330330:intron | 30.0% | |
| TATCTATGTAGTTGCACAAA+TGG | - | chr8_4:49460016-49460035 | Msa1330330:intron | 30.0% | |
| ATCTATGTAGTTGCACAAAT+GGG | - | chr8_4:49460017-49460036 | Msa1330330:intron | 30.0% | |
| !! | TCAATTTTTGTTTCCTTCCT+TGG | - | chr8_4:49460154-49460173 | Msa1330330:intron | 30.0% |
| TATATCATCATAACCAAGGA+AGG | + | chr8_4:49460170-49460189 | None:intergenic | 30.0% | |
| AACTTTGCGTATTTGCAAAA+AGG | + | chr8_4:49460445-49460464 | None:intergenic | 30.0% | |
| ! | TAATGGGGTCTAAAATCAAT+GGG | + | chr8_4:49460496-49460515 | None:intergenic | 30.0% |
| ! | ATAATGGGGTCTAAAATCAA+TGG | + | chr8_4:49460497-49460516 | None:intergenic | 30.0% |
| !! | ATTGATTTTAGACCCCATTA+TGG | - | chr8_4:49460496-49460515 | Msa1330330:intron | 30.0% |
| AAACCTAAAATAAGGCAACT+TGG | + | chr8_4:49460538-49460557 | None:intergenic | 30.0% | |
| !!! | GCCTTATTTTAGGTTTATGT+TGG | - | chr8_4:49460542-49460561 | Msa1330330:intron | 30.0% |
| ! | TGGTCTCAATTGACTATTTT+AGG | - | chr8_4:49460562-49460581 | Msa1330330:intron | 30.0% |
| AATAAAGAGACTTACTACCT+TGG | + | chr8_4:49460747-49460766 | None:intergenic | 30.0% | |
| GCTATAAGTCTCTCTTTATA+TGG | + | chr8_4:49460928-49460947 | None:intergenic | 30.0% | |
| GAAATTCTTGCAATCATGTT+GGG | + | chr8_4:49461155-49461174 | None:intergenic | 30.0% | |
| TGAAATTCTTGCAATCATGT+TGG | + | chr8_4:49461156-49461175 | None:intergenic | 30.0% | |
| ! | ATTAGCTAGGAATAGACTTT+TGG | - | chr8_4:49461178-49461197 | Msa1330330:intron | 30.0% |
| TGTTGTACAGTTGGAATAAA+TGG | - | chr8_4:49461224-49461243 | Msa1330330:intron | 30.0% | |
| GAACATATAGATACATCTCA+TGG | + | chr8_4:49461367-49461386 | None:intergenic | 30.0% | |
| TAAAACAAAATGTGGTAGCT+AGG | + | chr8_4:49461405-49461424 | None:intergenic | 30.0% | |
| ! | AGGTCAATAAGAGTTTTTGA+TGG | - | chr8_4:49461713-49461732 | Msa1330330:CDS | 30.0% |
| !! | GGCTTTGGAAAAACTTAATA+AGG | - | chr8_4:49461838-49461857 | Msa1330330:intron | 30.0% |
| ! | TTTCATGAATGAGCATTGTT+TGG | - | chr8_4:49461937-49461956 | Msa1330330:intron | 30.0% |
| ! | TTCATGAATGAGCATTGTTT+GGG | - | chr8_4:49461938-49461957 | Msa1330330:intron | 30.0% |
| TTAATCCCTAAAATTTCACC+AGG | + | chr8_4:49461993-49462012 | None:intergenic | 30.0% | |
| !! | ATGTTCTAAGAAGAGAGAAA+AGG | + | chr8_4:49462166-49462185 | None:intergenic | 30.0% |
| GATGTTTGTGTATGATTGAT+TGG | - | chr8_4:49462254-49462273 | Msa1330330:intron | 30.0% | |
| !!! | ATGAACCAATTTTGAAGCAA+TGG | + | chr8_4:49462332-49462351 | None:intergenic | 30.0% |
| ! | TTTTGTTACTATACACGACT+TGG | + | chr8_4:49462475-49462494 | None:intergenic | 30.0% |
| GCATGACAAACATTAAAGAA+TGG | - | chr8_4:49462776-49462795 | Msa1330330:intron | 30.0% | |
| CATTAAGCTTAGTTGTAGAA+CGG | - | chr8_4:49462864-49462883 | Msa1330330:intron | 30.0% | |
| ATTAAGCTTAGTTGTAGAAC+GGG | - | chr8_4:49462865-49462884 | Msa1330330:intron | 30.0% | |
| CTGAGAAATAGAGTAAGAAA+AGG | + | chr8_4:49462987-49463006 | None:intergenic | 30.0% | |
| TTTGATTGGAATGCATCATA+AGG | - | chr8_4:49463187-49463206 | Msa1330330:intron | 30.0% | |
| AGGTTAACATTAACTTACAC+AGG | + | chr8_4:49463411-49463430 | None:intergenic | 30.0% | |
| AATACAAGTAGCAGTGAAAA+AGG | + | chr8_4:49463431-49463450 | None:intergenic | 30.0% | |
| TCACTTATCATCTGTTAAAC+TGG | - | chr8_4:49463541-49463560 | Msa1330330:intron | 30.0% | |
| ! | CTGAATAGTATTGAACTACT+AGG | - | chr8_4:49463787-49463806 | Msa1330330:intron | 30.0% |
| TAATTCAATAGCAACTACGA+GGG | + | chr8_4:49463893-49463912 | None:intergenic | 30.0% | |
| ATAATTCAATAGCAACTACG+AGG | + | chr8_4:49463894-49463913 | None:intergenic | 30.0% | |
| ! | TTTCAGTATTTTTCACAGAC+TGG | + | chr8_4:49464130-49464149 | None:intergenic | 30.0% |
| GTCTGTGAAAAATACTGAAA+AGG | - | chr8_4:49464130-49464149 | Msa1330330:intron | 30.0% | |
| ! | GTGCAAAATGTATCTCATTT+TGG | - | chr8_4:49464212-49464231 | Msa1330330:intron | 30.0% |
| ATCATATGAAATATCTCGTG+AGG | - | chr8_4:49464315-49464334 | Msa1330330:intron | 30.0% | |
| CAGTGAGAGATATGAAAATG+AGG | + | chr8_4:49457232-49457251 | None:intergenic | 35.0% | |
| !! | GTTTTAGTCAAACGGAATCT+GGG | - | chr8_4:49457453-49457472 | Msa1330330:CDS | 35.0% |
| ! | TTTTAGTCAAACGGAATCTG+GGG | - | chr8_4:49457454-49457473 | Msa1330330:CDS | 35.0% |
| !!! | GAATCTGGGGGTTTTATTTT+AGG | - | chr8_4:49457467-49457486 | Msa1330330:CDS | 35.0% |
| TTCTATTGCAGCTAGAAAAG+AGG | + | chr8_4:49457621-49457640 | None:intergenic | 35.0% | |
| AATAACTATCCCCTAACAAG+TGG | - | chr8_4:49457661-49457680 | Msa1330330:intron | 35.0% | |
| ! | AATGTCGACTGTTACATAGA+TGG | + | chr8_4:49457689-49457708 | None:intergenic | 35.0% |
| CAAACTTATGCAACTAACAG+GGG | + | chr8_4:49457728-49457747 | None:intergenic | 35.0% | |
| CTTCAACAATTGTCAAAACG+GGG | + | chr8_4:49457834-49457853 | None:intergenic | 35.0% | |
| CCTTCAACAATTGTCAAAAC+GGG | + | chr8_4:49457835-49457854 | None:intergenic | 35.0% | |
| CCCTTCAACAATTGTCAAAA+CGG | + | chr8_4:49457836-49457855 | None:intergenic | 35.0% | |
| !! | CCGTTTTGACAATTGTTGAA+GGG | - | chr8_4:49457833-49457852 | Msa1330330:intron | 35.0% |
| !! | GATCAAAGACTAGCTTGTTT+CGG | - | chr8_4:49457861-49457880 | Msa1330330:CDS | 35.0% |
| AAAACATGGACATAGTCTCT+TGG | + | chr8_4:49457951-49457970 | None:intergenic | 35.0% | |
| TCAGTTAAATAACAAAGCCC+CGG | + | chr8_4:49457974-49457993 | None:intergenic | 35.0% | |
| ACCAAGTCAACTTTGCTAAA+TGG | - | chr8_4:49458001-49458020 | Msa1330330:intron | 35.0% | |
| TGCCACAACAATTTATCACT+AGG | - | chr8_4:49458069-49458088 | Msa1330330:intron | 35.0% | |
| !! | TTTATCACTAGGTACTGAGA+TGG | - | chr8_4:49458080-49458099 | Msa1330330:intron | 35.0% |
| !! | TTATCACTAGGTACTGAGAT+GGG | - | chr8_4:49458081-49458100 | Msa1330330:intron | 35.0% |
| !! | ACGTTGACTTATTCTCATCT+GGG | + | chr8_4:49458522-49458541 | None:intergenic | 35.0% |
| !! | AACGTTGACTTATTCTCATC+TGG | + | chr8_4:49458523-49458542 | None:intergenic | 35.0% |
| !! | TTGATGGATTCGTTAACATC+TGG | + | chr8_4:49458608-49458627 | None:intergenic | 35.0% |
| TGTTAACGAATCCATCAAGT+TGG | - | chr8_4:49458610-49458629 | Msa1330330:CDS | 35.0% | |
| TCGAAAGAGTTAGAAGATAG+TGG | - | chr8_4:49458725-49458744 | Msa1330330:intron | 35.0% | |
| !!! | TTTTTTTGTGGCTTCTACCA+TGG | - | chr8_4:49458966-49458985 | Msa1330330:intron | 35.0% |
| !!! | TTTTTTGTGGCTTCTACCAT+GGG | - | chr8_4:49458967-49458986 | Msa1330330:intron | 35.0% |
| GACAATATATATCCTGGACA+GGG | + | chr8_4:49459341-49459360 | None:intergenic | 35.0% | |
| AGACAATATATATCCTGGAC+AGG | + | chr8_4:49459342-49459361 | None:intergenic | 35.0% | |
| GGGTAAATAGATAATTTCGG+GGG | - | chr8_4:49459469-49459488 | Msa1330330:intron | 35.0% | |
| ! | AGAGAGGAACAAAGTTGATT+GGG | + | chr8_4:49459576-49459595 | None:intergenic | 35.0% |
| CGAGAAATGCAAAACAAAAG+GGG | - | chr8_4:49459628-49459647 | Msa1330330:intron | 35.0% | |
| TAGCAATTACCTAAGAGGAA+GGG | + | chr8_4:49459772-49459791 | None:intergenic | 35.0% | |
| TTAGCAATTACCTAAGAGGA+AGG | + | chr8_4:49459773-49459792 | None:intergenic | 35.0% | |
| GAAGTTAGCAATTACCTAAG+AGG | + | chr8_4:49459777-49459796 | None:intergenic | 35.0% | |
| AGTGATTAGCAATTGGCAAA+TGG | + | chr8_4:49459810-49459829 | None:intergenic | 35.0% | |
| AGTTAATAAGCTAGGTTTCG+TGG | + | chr8_4:49459849-49459868 | None:intergenic | 35.0% | |
| CACTAGTCAGTTAATAAGCT+AGG | + | chr8_4:49459857-49459876 | None:intergenic | 35.0% | |
| ATGGAATTGCTAAACATTGC+AGG | - | chr8_4:49460203-49460222 | Msa1330330:intron | 35.0% | |
| ATTGCTAAACATTGCAGGAA+TGG | - | chr8_4:49460208-49460227 | Msa1330330:intron | 35.0% | |
| TTGCTAAACATTGCAGGAAT+GGG | - | chr8_4:49460209-49460228 | Msa1330330:intron | 35.0% | |
| TTACATGTACAAGTTTAGCC+TGG | + | chr8_4:49460295-49460314 | None:intergenic | 35.0% | |
| AAAGGTCGAATTCATAACTC+AGG | + | chr8_4:49460427-49460446 | None:intergenic | 35.0% | |
| !! | GTCTATTTTGGATCTATTGC+AGG | + | chr8_4:49460469-49460488 | None:intergenic | 35.0% |
| TATAAAGCAACCGCCATAAT+GGG | + | chr8_4:49460512-49460531 | None:intergenic | 35.0% | |
| TGGCTCTCAATGATGAATAA+GGG | + | chr8_4:49460908-49460927 | None:intergenic | 35.0% | |
| ATGGCTCTCAATGATGAATA+AGG | + | chr8_4:49460909-49460928 | None:intergenic | 35.0% | |
| TATTCCAACTGTACAACAAG+AGG | + | chr8_4:49461222-49461241 | None:intergenic | 35.0% | |
| GCCAACTTCCACATATTTAT+AGG | - | chr8_4:49461292-49461311 | Msa1330330:CDS | 35.0% | |
| GCCTATAAATATGTGGAAGT+TGG | + | chr8_4:49461296-49461315 | None:intergenic | 35.0% | |
| ATGAATAGGAAGTCAACATG+AGG | + | chr8_4:49461462-49461481 | None:intergenic | 35.0% | |
| ! | GTTGACTTCCTATTCATGAT+AGG | - | chr8_4:49461465-49461484 | Msa1330330:intron | 35.0% |
| GTACAAGACCTATCATGAAT+AGG | + | chr8_4:49461476-49461495 | None:intergenic | 35.0% | |
| TGCGTTAAGATGTTCTTCAT+TGG | - | chr8_4:49461601-49461620 | Msa1330330:intron | 35.0% | |
| TCATTGGCAAATCTATGATC+TGG | - | chr8_4:49461617-49461636 | Msa1330330:intron | 35.0% | |
| TTAAATGGTACAGTGTTAGC+AGG | + | chr8_4:49461739-49461758 | None:intergenic | 35.0% | |
| TAAGGTTTGAGTAAAGCCTT+TGG | - | chr8_4:49461856-49461875 | Msa1330330:intron | 35.0% | |
| ! | CTTATCCTCTTTGAAAGTAC+CGG | + | chr8_4:49461912-49461931 | None:intergenic | 35.0% |
| TCAGTAGAGAAACATATAGC+AGG | + | chr8_4:49462219-49462238 | None:intergenic | 35.0% | |
| TGAAGCCATTGCTTCAAAAT+TGG | - | chr8_4:49462324-49462343 | Msa1330330:intron | 35.0% | |
| ! | TGCTTCAAAATTGGTTCATG+TGG | - | chr8_4:49462333-49462352 | Msa1330330:intron | 35.0% |
| !!! | TTTTTTGGCTGAAAAGGACA+TGG | + | chr8_4:49462513-49462532 | None:intergenic | 35.0% |
| TTAAGCAAGTGTTAGTGGTA+GGG | - | chr8_4:49462719-49462738 | Msa1330330:intron | 35.0% | |
| GTCACAGGATTCTGAATTAT+TGG | - | chr8_4:49462826-49462845 | Msa1330330:intron | 35.0% | |
| CGTTCTACAACTAAGCTTAA+TGG | + | chr8_4:49462866-49462885 | None:intergenic | 35.0% | |
| GTAAGAAAAGGAAGCTTCAA+AGG | + | chr8_4:49462975-49462994 | None:intergenic | 35.0% | |
| ! | TAAGGTTTGATTGGTTGAGT+AGG | + | chr8_4:49463075-49463094 | None:intergenic | 35.0% |
| !! | AGAAAACCCTTCTGAAATTG+AGG | - | chr8_4:49463344-49463363 | Msa1330330:intron | 35.0% |
| !! | CACTGCTACTTGTATTTTGT+AGG | - | chr8_4:49463435-49463454 | Msa1330330:intron | 35.0% |
| CTGTTACTCATCTGATTCAT+TGG | - | chr8_4:49463466-49463485 | Msa1330330:intron | 35.0% | |
| ! | ATGCACATATTGAAAAGCAC+AGG | - | chr8_4:49463576-49463595 | Msa1330330:intron | 35.0% |
| !!! | AACCTGAGGTTTTTAGGTTA+TGG | + | chr8_4:49463652-49463671 | None:intergenic | 35.0% |
| ! | ATTCAGTAACATTTGGTGAC+TGG | + | chr8_4:49463773-49463792 | None:intergenic | 35.0% |
| ! | AACTACTAGGGTGCTTTATT+TGG | - | chr8_4:49463800-49463819 | Msa1330330:intron | 35.0% |
| AATCATCTTGAAGCTTTCTG+AGG | + | chr8_4:49464049-49464068 | None:intergenic | 35.0% | |
| AGATGATTTGACAGATGAGA+TGG | - | chr8_4:49464061-49464080 | Msa1330330:intron | 35.0% | |
| AACCAATAACCAGTTAGAGA+AGG | + | chr8_4:49464179-49464198 | None:intergenic | 35.0% | |
| !! | TGTATCTCATTTTGGCAATG+AGG | - | chr8_4:49464220-49464239 | Msa1330330:intron | 35.0% |
| !! | GTATCTCATTTTGGCAATGA+GGG | - | chr8_4:49464221-49464240 | Msa1330330:intron | 35.0% |
| ATGATGTTAATACCTTGCGA+TGG | - | chr8_4:49464251-49464270 | Msa1330330:intron | 35.0% | |
| CAAGCAAGCCATCATTTATT+AGG | + | chr8_4:49464351-49464370 | None:intergenic | 35.0% | |
| GATACTTGATTCTACTGAAG+AGG | - | chr8_4:49464373-49464392 | Msa1330330:intron | 35.0% | |
| ! | TCTTTTAATCCGTGTCACAT+AGG | - | chr8_4:49464529-49464548 | Msa1330330:intron | 35.0% |
| ! | CTTTTAATCCGTGTCACATA+GGG | - | chr8_4:49464530-49464549 | Msa1330330:intron | 35.0% |
| !!! | TCTTGCAGTTTTTTTTGGGA+AGG | - | chr8_4:49464686-49464705 | Msa1330330:five_prime_UTR | 35.0% |
| !!! | TGGTGGATGAGAGTTTTAGA+CGG | + | chr8_4:49457310-49457329 | None:intergenic | 40.0% |
| GAGTTAGAAGATTGTTGTGG+TGG | + | chr8_4:49457327-49457346 | None:intergenic | 40.0% | |
| AGCGAGTTAGAAGATTGTTG+TGG | + | chr8_4:49457330-49457349 | None:intergenic | 40.0% | |
| TCCACACCATTCCAAAAGTT+CGG | - | chr8_4:49457364-49457383 | Msa1330330:three_prime_UTR | 40.0% | |
| ! | GTGTACTAACCAATCGATTC+AGG | + | chr8_4:49457419-49457438 | None:intergenic | 40.0% |
| !! | GGTTTTAGTCAAACGGAATC+TGG | - | chr8_4:49457452-49457471 | Msa1330330:CDS | 40.0% |
| TTTAGTCAAACGGAATCTGG+GGG | - | chr8_4:49457455-49457474 | Msa1330330:CDS | 40.0% | |
| ! | ATAGATGGCTCCACTTGTTA+GGG | + | chr8_4:49457674-49457693 | None:intergenic | 40.0% |
| AACAATTGTCAAAACGGGGT+AGG | + | chr8_4:49457830-49457849 | None:intergenic | 40.0% | |
| !! | CCCGTTTTGACAATTGTTGA+AGG | - | chr8_4:49457832-49457851 | Msa1330330:intron | 40.0% |
| GTTACTGCAAGGAGGAAAAA+AGG | + | chr8_4:49457929-49457948 | None:intergenic | 40.0% | |
| ATAGTCTCTTGGTTACTGCA+AGG | + | chr8_4:49457940-49457959 | None:intergenic | 40.0% | |
| ! | GAGACTATGTCCATGTTTTC+CGG | - | chr8_4:49457952-49457971 | Msa1330330:intron | 40.0% |
| ! | AGACTATGTCCATGTTTTCC+GGG | - | chr8_4:49457953-49457972 | Msa1330330:intron | 40.0% |
| GCCATTTAGCAAAGTTGACT+TGG | + | chr8_4:49458005-49458024 | None:intergenic | 40.0% | |
| ! | GTTGTGGCATTGAGAAAAGA+AGG | + | chr8_4:49458058-49458077 | None:intergenic | 40.0% |
| !! | TATCACTAGGTACTGAGATG+GGG | - | chr8_4:49458082-49458101 | Msa1330330:intron | 40.0% |
| ! | TTTAGCCCCTTTTGCAGTTT+TGG | + | chr8_4:49458327-49458346 | None:intergenic | 40.0% |
| TGCAAAAGGGGCTAAACTTA+GGG | - | chr8_4:49458331-49458350 | Msa1330330:intron | 40.0% | |
| ! | GTATCACGAACTTGCGATTT+TGG | + | chr8_4:49458387-49458406 | None:intergenic | 40.0% |
| !! | CAACGTTACAAAGCTTGTTG+AGG | - | chr8_4:49458536-49458555 | Msa1330330:intron | 40.0% |
| CACAAGCAGAATGAATGTCT+AGG | - | chr8_4:49458682-49458701 | Msa1330330:intron | 40.0% | |
| ! | TTTTTGTGGCTTCTACCATG+GGG | - | chr8_4:49458968-49458987 | Msa1330330:intron | 40.0% |
| TTCATTGACACAGTCGTGTA+CGG | + | chr8_4:49459070-49459089 | None:intergenic | 40.0% | |
| TTCATTGACACAGTCGTGTA+CGG | + | chr8_4:49459070-49459089 | None:intergenic | 40.0% | |
| GAAAAGACATCACATTGGCA+TGG | + | chr8_4:49459369-49459388 | None:intergenic | 40.0% | |
| CAAATTGCTCTCAGGTTTAC+AGG | + | chr8_4:49459442-49459461 | None:intergenic | 40.0% | |
| !! | TGAGAGCAATTTGCTGTTGT+GGG | - | chr8_4:49459449-49459468 | Msa1330330:intron | 40.0% |
| AAATTGCTCTTTAAGCAGGC+TGG | + | chr8_4:49459509-49459528 | None:intergenic | 40.0% | |
| !! | TGATTGGGTTGATGTGGATT+GGG | + | chr8_4:49459561-49459580 | None:intergenic | 40.0% |
| !! | TTGATTGGGTTGATGTGGAT+TGG | + | chr8_4:49459562-49459581 | None:intergenic | 40.0% |
| !! | CAAAGTTGATTGGGTTGATG+TGG | + | chr8_4:49459567-49459586 | None:intergenic | 40.0% |
| ! | GAGAGAGGAACAAAGTTGAT+TGG | + | chr8_4:49459577-49459596 | None:intergenic | 40.0% |
| TGCGTAATTTCTTTCTTCGG+TGG | + | chr8_4:49459606-49459625 | None:intergenic | 40.0% | |
| TAGCAATTGGCAAATGGAGA+AGG | + | chr8_4:49459804-49459823 | None:intergenic | 40.0% | |
| AATCTGTGTCATGTCAGAAG+AGG | - | chr8_4:49460350-49460369 | Msa1330330:intron | 40.0% | |
| TCATGTCAGAAGAGGAATCT+TGG | - | chr8_4:49460358-49460377 | Msa1330330:intron | 40.0% | |
| !! | TAGTTGAAGTTGATGCTGTG+TGG | - | chr8_4:49460386-49460405 | Msa1330330:intron | 40.0% |
| ! | GATTTTAGACCCCATTATGG+CGG | - | chr8_4:49460499-49460518 | Msa1330330:intron | 40.0% |
| ATAAAGCAACCGCCATAATG+GGG | + | chr8_4:49460511-49460530 | None:intergenic | 40.0% | |
| CTATAAAGCAACCGCCATAA+TGG | + | chr8_4:49460513-49460532 | None:intergenic | 40.0% | |
| !!! | GCTCCAAGTTGCCTTATTTT+AGG | - | chr8_4:49460532-49460551 | Msa1330330:intron | 40.0% |
| TGAACAACTGGAACAATTGG+CGG | - | chr8_4:49460698-49460717 | Msa1330330:intron | 40.0% | |
| GAGAGACTTATAGCTAGAGT+TGG | - | chr8_4:49460934-49460953 | Msa1330330:intron | 40.0% | |
| !!! | GGAGGGTGTAGAAGTATTTT+AGG | + | chr8_4:49461096-49461115 | None:intergenic | 40.0% |
| GATATCTATGGACCAACTTG+AGG | + | chr8_4:49461117-49461136 | None:intergenic | 40.0% | |
| ! | CTAGGAATAGACTTTTGGTC+AGG | - | chr8_4:49461183-49461202 | Msa1330330:intron | 40.0% |
| ! | TTTGCCTCTTGTTGTACAGT+TGG | - | chr8_4:49461215-49461234 | Msa1330330:intron | 40.0% |
| CAGGGATGCCTATAAATATG+TGG | + | chr8_4:49461303-49461322 | None:intergenic | 40.0% | |
| !!! | TGCGCAGGGTTTTAGTTAAA+TGG | + | chr8_4:49461435-49461454 | None:intergenic | 40.0% |
| ! | CATGATAGGTCTTGTACAGT+CGG | - | chr8_4:49461479-49461498 | Msa1330330:intron | 40.0% |
| TGTACAGTCGGCATTTAAGT+AGG | - | chr8_4:49461491-49461510 | Msa1330330:intron | 40.0% | |
| CTCATTGCAAACGAAATACC+AGG | - | chr8_4:49461649-49461668 | Msa1330330:intron | 40.0% | |
| GAACAAGATGCATCACTCAT+TGG | + | chr8_4:49461675-49461694 | None:intergenic | 40.0% | |
| ACCTTGATCAAAAGCTTGAG+GGG | + | chr8_4:49461697-49461716 | None:intergenic | 40.0% | |
| GACCTTGATCAAAAGCTTGA+GGG | + | chr8_4:49461698-49461717 | None:intergenic | 40.0% | |
| TGACCTTGATCAAAAGCTTG+AGG | + | chr8_4:49461699-49461718 | None:intergenic | 40.0% | |
| TTCACATGTAGTTGTTGTCG+AGG | - | chr8_4:49461795-49461814 | Msa1330330:intron | 40.0% | |
| ! | TAAGTTTTTCCAAAGCCCAG+CGG | + | chr8_4:49461835-49461854 | None:intergenic | 40.0% |
| TGAAATACACGGAGCTTGAT+CGG | + | chr8_4:49461885-49461904 | None:intergenic | 40.0% | |
| GTACCGGATCTTGAAATACA+CGG | + | chr8_4:49461896-49461915 | None:intergenic | 40.0% | |
| AAGATCCGGTACTTTCAAAG+AGG | - | chr8_4:49461904-49461923 | Msa1330330:intron | 40.0% | |
| ! | GTATGATTGATTGGTCATGC+AGG | - | chr8_4:49462263-49462282 | Msa1330330:intron | 40.0% |
| ACTTGGAGCAAGCTATGATA+GGG | + | chr8_4:49462458-49462477 | None:intergenic | 40.0% | |
| CTTGGTTAAGCAAGTGTTAG+TGG | - | chr8_4:49462714-49462733 | Msa1330330:intron | 40.0% | |
| GTTAAGCAAGTGTTAGTGGT+AGG | - | chr8_4:49462718-49462737 | Msa1330330:intron | 40.0% | |
| ! | GGTAGAACTTCAAACTTGCT+TGG | - | chr8_4:49462754-49462773 | Msa1330330:intron | 40.0% |
| !! | TGCTCATTTTGATAGGTCAC+AGG | - | chr8_4:49462811-49462830 | Msa1330330:intron | 40.0% |
| AGTAGGTGTGCAGAAAATGA+TGG | + | chr8_4:49463058-49463077 | None:intergenic | 40.0% | |
| !! | GTCTGACATAGAAGTATCTG+AGG | - | chr8_4:49463302-49463321 | Msa1330330:intron | 40.0% |
| TGCTCTATCTTCAGTACTTG+AGG | + | chr8_4:49463501-49463520 | None:intergenic | 40.0% | |
| GTCCATAACCTAAAAACCTC+AGG | - | chr8_4:49463647-49463666 | Msa1330330:intron | 40.0% | |
| ! | CATAGGAACCTGAGGTTTTT+AGG | + | chr8_4:49463658-49463677 | None:intergenic | 40.0% |
| GAAATTTGCATAGGAACCTG+AGG | + | chr8_4:49463666-49463685 | None:intergenic | 40.0% | |
| ! | AATAGCAACTACGAGGGTAT+TGG | + | chr8_4:49463887-49463906 | None:intergenic | 40.0% |
| TGATTTGACAGATGAGATGG+TGG | - | chr8_4:49464064-49464083 | Msa1330330:intron | 40.0% | |
| TCAATCTCTCCTTCTCTAAC+TGG | - | chr8_4:49464167-49464186 | Msa1330330:intron | 40.0% | |
| CTCCTTCTCTAACTGGTTAT+TGG | - | chr8_4:49464174-49464193 | Msa1330330:intron | 40.0% | |
| !! | ATTTTGGCAATGAGGGATTG+TGG | - | chr8_4:49464228-49464247 | Msa1330330:intron | 40.0% |
| ATGTTAATACCTTGCGATGG+TGG | - | chr8_4:49464254-49464273 | Msa1330330:intron | 40.0% | |
| AGTATATTGTGTTTGCTCGC+AGG | + | chr8_4:49464436-49464455 | None:intergenic | 40.0% | |
| GCGAGCAAACACAATATACT+CGG | - | chr8_4:49464436-49464455 | Msa1330330:intron | 40.0% | |
| AATGACGTGTGTGTTTGTCA+TGG | - | chr8_4:49464502-49464521 | Msa1330330:intron | 40.0% | |
| AGGGTGCAGTAAACATTTGA+TGG | - | chr8_4:49464549-49464568 | Msa1330330:intron | 40.0% | |
| GGGTGCAGTAAACATTTGAT+GGG | - | chr8_4:49464550-49464569 | Msa1330330:intron | 40.0% | |
| GGTGCAGTAAACATTTGATG+GGG | - | chr8_4:49464551-49464570 | Msa1330330:intron | 40.0% | |
| ! | CAAACATGGCTATTTCCAGA+TGG | - | chr8_4:49464589-49464608 | Msa1330330:five_prime_UTR | 40.0% |
| !!! | GATGAGAGTTTTAGACGGAG+CGG | + | chr8_4:49457305-49457324 | None:intergenic | 45.0% |
| TTGGAATGGTGTGGAGATTG+CGG | + | chr8_4:49457359-49457378 | None:intergenic | 45.0% | |
| ! | ATCGATTCAGGAGAGGAGAT+TGG | + | chr8_4:49457407-49457426 | None:intergenic | 45.0% |
| ATCTCCTCTCCTGAATCGAT+TGG | - | chr8_4:49457407-49457426 | Msa1330330:three_prime_UTR | 45.0% | |
| ! | CTAACCAATCGATTCAGGAG+AGG | + | chr8_4:49457414-49457433 | None:intergenic | 45.0% |
| ! | TAGATGGCTCCACTTGTTAG+GGG | + | chr8_4:49457673-49457692 | None:intergenic | 45.0% |
| CATAGATGGCTCCACTTGTT+AGG | + | chr8_4:49457675-49457694 | None:intergenic | 45.0% | |
| ! | GACTATGTCCATGTTTTCCG+GGG | - | chr8_4:49457954-49457973 | Msa1330330:intron | 45.0% |
| TAACAAAGCCCCGGAAAACA+TGG | + | chr8_4:49457965-49457984 | None:intergenic | 45.0% | |
| ! | GTGGCATTGAGAAAAGAAGG+TGG | + | chr8_4:49458055-49458074 | None:intergenic | 45.0% |
| !! | GTGTGTTGACTGGTCAAGAT+TGG | - | chr8_4:49458292-49458311 | Msa1330330:intron | 45.0% |
| CTGCAAAAGGGGCTAAACTT+AGG | - | chr8_4:49458330-49458349 | Msa1330330:intron | 45.0% | |
| GCAAAAGGGGCTAAACTTAG+GGG | - | chr8_4:49458332-49458351 | Msa1330330:intron | 45.0% | |
| CAAAAGGGGCTAAACTTAGG+GGG | - | chr8_4:49458333-49458352 | Msa1330330:intron | 45.0% | |
| ATCGCAAGTTCGTGATACTC+TGG | - | chr8_4:49458389-49458408 | Msa1330330:intron | 45.0% | |
| TCGCAAGTTCGTGATACTCT+GGG | - | chr8_4:49458390-49458409 | Msa1330330:intron | 45.0% | |
| ! | TGGAATGCAGCTTTAGTTGC+AGG | - | chr8_4:49458745-49458764 | Msa1330330:intron | 45.0% |
| ! | GGAATGCAGCTTTAGTTGCA+GGG | - | chr8_4:49458746-49458765 | Msa1330330:intron | 45.0% |
| CAGGGTTGTCCCAATCAAAT+TGG | + | chr8_4:49459323-49459342 | None:intergenic | 45.0% | |
| CACAACAGCAAATTGCTCTC+AGG | + | chr8_4:49459450-49459469 | None:intergenic | 45.0% | |
| !! | CTGAGAGCAATTTGCTGTTG+TGG | - | chr8_4:49459448-49459467 | Msa1330330:intron | 45.0% |
| CAATTACCTAAGAGGAAGGG+AGG | + | chr8_4:49459769-49459788 | None:intergenic | 45.0% | |
| !! | GAAGTTGATGCTGTGTGGTT+AGG | - | chr8_4:49460391-49460410 | Msa1330330:intron | 45.0% |
| ! | TCAATGGGTCGGGTCTATTT+TGG | + | chr8_4:49460481-49460500 | None:intergenic | 45.0% |
| ! | GGGTCTAAAATCAATGGGTC+GGG | + | chr8_4:49460491-49460510 | None:intergenic | 45.0% |
| ! | GGGGTCTAAAATCAATGGGT+CGG | + | chr8_4:49460492-49460511 | None:intergenic | 45.0% |
| !! | TGCTACTTTGCGTGAACAAC+TGG | - | chr8_4:49460686-49460705 | Msa1330330:intron | 45.0% |
| GCGTGAACAACTGGAACAAT+TGG | - | chr8_4:49460695-49460714 | Msa1330330:intron | 45.0% | |
| TCTATGGACCAACTTGAGGA+GGG | + | chr8_4:49461113-49461132 | None:intergenic | 45.0% | |
| ATCTATGGACCAACTTGAGG+AGG | + | chr8_4:49461114-49461133 | None:intergenic | 45.0% | |
| CAAAATGTGGTAGCTAGGAG+CGG | + | chr8_4:49461400-49461419 | None:intergenic | 45.0% | |
| CAACATGAGGTTATTGCGCA+GGG | + | chr8_4:49461449-49461468 | None:intergenic | 45.0% | |
| TCAACATGAGGTTATTGCGC+AGG | + | chr8_4:49461450-49461469 | None:intergenic | 45.0% | |
| GGCATTTAAGTAGGCCTCAA+TGG | - | chr8_4:49461500-49461519 | Msa1330330:intron | 45.0% | |
| ! | TCCCCTCAAGCTTTTGATCA+AGG | - | chr8_4:49461693-49461712 | Msa1330330:CDS | 45.0% |
| GCTCCGTGTATTTCAAGATC+CGG | - | chr8_4:49461890-49461909 | Msa1330330:intron | 45.0% | |
| TTGGTCATGCAGGATCTCAA+AGG | - | chr8_4:49462273-49462292 | Msa1330330:intron | 45.0% | |
| CTTGGAGCAAGCTATGATAG+GGG | + | chr8_4:49462457-49462476 | None:intergenic | 45.0% | |
| GACTTGGAGCAAGCTATGAT+AGG | + | chr8_4:49462459-49462478 | None:intergenic | 45.0% | |
| ATCTTAAGTCTGAGCCTCTG+AGG | - | chr8_4:49462687-49462706 | Msa1330330:intron | 45.0% | |
| GTGGTAGGGTGGAAACTTAA+TGG | - | chr8_4:49462733-49462752 | Msa1330330:intron | 45.0% | |
| AGAGAGAGAGATCCTTCTAG+GGG | + | chr8_4:49462913-49462932 | None:intergenic | 45.0% | |
| GAGAGAGAGAGATCCTTCTA+GGG | + | chr8_4:49462914-49462933 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGATCCTTCT+AGG | + | chr8_4:49462915-49462934 | None:intergenic | 45.0% | |
| GCTCGTGTGTTTGTAATGAC+TGG | - | chr8_4:49463014-49463033 | Msa1330330:intron | 45.0% | |
| GATAAGTGATCAGTCTCAGC+AGG | + | chr8_4:49463530-49463549 | None:intergenic | 45.0% | |
| TCTGTTAAACTGGATGCTGC+AGG | - | chr8_4:49463551-49463570 | Msa1330330:intron | 45.0% | |
| ! | TTGTATTGACCACCATCGCA+AGG | + | chr8_4:49464266-49464285 | None:intergenic | 45.0% |
| CCACGTTAAGCAAGAAGTCT+TGG | + | chr8_4:49464468-49464487 | None:intergenic | 45.0% | |
| CCAAGACTTCTTGCTTAACG+TGG | - | chr8_4:49464465-49464484 | Msa1330330:intron | 45.0% | |
| TTACTGCACCCTATGTGACA+CGG | + | chr8_4:49464541-49464560 | None:intergenic | 45.0% | |
| !!! | TTTTTTATTGATTTTTTAAA+CGG | + | chr8_4:49458928-49458947 | None:intergenic | 5.0% |
| !!! | TTTTAAAAATTAAAACTAAA+AGG | + | chr8_4:49460052-49460071 | None:intergenic | 5.0% |
| !!! | AGAGTTTTAGACGGAGCGGT+GGG | + | chr8_4:49457301-49457320 | None:intergenic | 50.0% |
| !!! | GCCGAACTTTTGGAATGGTG+TGG | + | chr8_4:49457368-49457387 | None:intergenic | 50.0% |
| !! | CAGACGCCGAACTTTTGGAA+TGG | + | chr8_4:49457373-49457392 | None:intergenic | 50.0% |
| ! | TGATGCAGACGCCGAACTTT+TGG | + | chr8_4:49457378-49457397 | None:intergenic | 50.0% |
| GTCTCTTGGTTACTGCAAGG+AGG | + | chr8_4:49457937-49457956 | None:intergenic | 50.0% | |
| !! | ACTAGGTACTGAGATGGGGT+TGG | - | chr8_4:49458086-49458105 | Msa1330330:intron | 50.0% |
| !! | GTACTGAGATGGGGTTGGTA+TGG | - | chr8_4:49458091-49458110 | Msa1330330:intron | 50.0% |
| GCGTCCTACTCACTTAAGTG+AGG | - | chr8_4:49458261-49458280 | Msa1330330:intron | 50.0% | |
| GGCACCTCACTTAAGTGAGT+AGG | + | chr8_4:49458268-49458287 | None:intergenic | 50.0% | |
| TTGACCAGTCAACACACACG+TGG | + | chr8_4:49458289-49458308 | None:intergenic | 50.0% | |
| ! | TTGACTGGTCAAGATTGGCC+TGG | - | chr8_4:49458297-49458316 | Msa1330330:intron | 50.0% |
| !! | TGACTGGTCAAGATTGGCCT+GGG | - | chr8_4:49458298-49458317 | Msa1330330:intron | 50.0% |
| CGCAAGTTCGTGATACTCTG+GGG | - | chr8_4:49458391-49458410 | Msa1330330:intron | 50.0% | |
| GCAAGTTCGTGATACTCTGG+GGG | - | chr8_4:49458392-49458411 | Msa1330330:intron | 50.0% | |
| !! | CGAATCCATCAAGTTGGAGC+AGG | - | chr8_4:49458616-49458635 | Msa1330330:CDS | 50.0% |
| ATCTGCCTGCTCCAACTTGA+TGG | + | chr8_4:49458624-49458643 | None:intergenic | 50.0% | |
| !! | ACGGTGCTGTCGATCATAGA+TGG | + | chr8_4:49458909-49458928 | None:intergenic | 50.0% |
| GGATTGGGCCCTCAATTCAA+AGG | + | chr8_4:49459546-49459565 | None:intergenic | 50.0% | |
| ! | GAGTCTACGCTCTAGATGTG+CGG | + | chr8_4:49459704-49459723 | None:intergenic | 50.0% |
| !!! | TTAGCCTGGTTTTGCTGCTG+AGG | + | chr8_4:49460281-49460300 | None:intergenic | 50.0% |
| CTGTGTGGTTAGGATGTCAC+AGG | - | chr8_4:49460401-49460420 | Msa1330330:intron | 50.0% | |
| TACTACCTTGGCAAGCCTTC+TGG | + | chr8_4:49460735-49460754 | None:intergenic | 50.0% | |
| CTTCTACACCCTCCTCAAGT+TGG | - | chr8_4:49461102-49461121 | Msa1330330:intron | 50.0% | |
| AAGCGCACAACAGACCATTG+AGG | + | chr8_4:49461517-49461536 | None:intergenic | 50.0% | |
| AGATGCATCACTCATTGGCC+TGG | + | chr8_4:49461670-49461689 | None:intergenic | 50.0% | |
| TTGGCTGAAAAGGACATGGC+TGG | + | chr8_4:49462509-49462528 | None:intergenic | 50.0% | |
| CTTAACCAAGCAGACCTCAG+AGG | + | chr8_4:49462704-49462723 | None:intergenic | 50.0% | |
| AGCAAGTGTTAGTGGTAGGG+TGG | - | chr8_4:49462722-49462741 | Msa1330330:intron | 50.0% | |
| CGGGAAACCCATTGTTGAAG+AGG | - | chr8_4:49462884-49462903 | Msa1330330:intron | 50.0% | |
| GGGGCTTCCTCTTCAACAAT+GGG | + | chr8_4:49462894-49462913 | None:intergenic | 50.0% | |
| AGGGGCTTCCTCTTCAACAA+TGG | + | chr8_4:49462895-49462914 | None:intergenic | 50.0% | |
| TTGAAGAGGAAGCCCCTAGA+AGG | - | chr8_4:49462898-49462917 | Msa1330330:intron | 50.0% | |
| ATGCTGATGTCGCCTTCTTC+TGG | - | chr8_4:49463372-49463391 | Msa1330330:intron | 50.0% | |
| TGCTGATGTCGCCTTCTTCT+GGG | - | chr8_4:49463373-49463392 | Msa1330330:intron | 50.0% | |
| ! | GACAGATGAGATGGTGGTGT+TGG | - | chr8_4:49464070-49464089 | Msa1330330:intron | 50.0% |
| AGAGGCCATTGAGCATAGCT+TGG | - | chr8_4:49464391-49464410 | Msa1330330:intron | 50.0% | |
| GCTTGCCAAGCTATGCTCAA+TGG | + | chr8_4:49464399-49464418 | None:intergenic | 50.0% | |
| !!! | GAGTTTTAGACGGAGCGGTG+GGG | + | chr8_4:49457300-49457319 | None:intergenic | 55.0% |
| !!! | GAGAGTTTTAGACGGAGCGG+TGG | + | chr8_4:49457302-49457321 | None:intergenic | 55.0% |
| GAATGGTGTGGAGATTGCGG+TGG | + | chr8_4:49457356-49457375 | None:intergenic | 55.0% | |
| !! | GACTGGTCAAGATTGGCCTG+GGG | - | chr8_4:49458299-49458318 | Msa1330330:intron | 55.0% |
| !! | ACTGGTCAAGATTGGCCTGG+GGG | - | chr8_4:49458300-49458319 | Msa1330330:intron | 55.0% |
| !! | TTTTGCAGTTTTGGCCCCCC+AGG | + | chr8_4:49458318-49458337 | None:intergenic | 55.0% |
| TGGGGGGCCAAAACTGCAAA+AGG | - | chr8_4:49458317-49458336 | Msa1330330:intron | 55.0% | |
| GGGGGGCCAAAACTGCAAAA+GGG | - | chr8_4:49458318-49458337 | Msa1330330:intron | 55.0% | |
| GGGGGCCAAAACTGCAAAAG+GGG | - | chr8_4:49458319-49458338 | Msa1330330:intron | 55.0% | |
| TGATTGGGACAACCCTGTCC+AGG | - | chr8_4:49459326-49459345 | Msa1330330:intron | 55.0% | |
| AAGCAGGCTGGATTGCTCTC+AGG | + | chr8_4:49459497-49459516 | None:intergenic | 55.0% | |
| TCTAGATGTGCGGTGGTGTG+TGG | + | chr8_4:49459694-49459713 | None:intergenic | 55.0% | |
| ! | TCTACGCTCTAGATGTGCGG+TGG | + | chr8_4:49459701-49459720 | None:intergenic | 55.0% |
| GTAGACTCCGACTCTGACGA+CGG | - | chr8_4:49459716-49459735 | Msa1330330:intron | 55.0% | |
| TGCTCCTCAGCAGCAAAACC+AGG | - | chr8_4:49460274-49460293 | Msa1330330:intron | 55.0% | |
| GCGGAAGAGAAGACTCCAGA+AGG | - | chr8_4:49460717-49460736 | Msa1330330:intron | 55.0% | |
| AGACTCCAGAAGGCTTGCCA+AGG | - | chr8_4:49460727-49460746 | Msa1330330:intron | 55.0% | |
| AGCTAGGAGCGGTATGGATG+TGG | + | chr8_4:49461389-49461408 | None:intergenic | 55.0% | |
| TGTGGTAGCTAGGAGCGGTA+TGG | + | chr8_4:49461395-49461414 | None:intergenic | 55.0% | |
| GGAGCTTGATCGGTTGCCAA+AGG | + | chr8_4:49461875-49461894 | None:intergenic | 55.0% | |
| CTTCTTCGCAGCCCAGAAGA+AGG | + | chr8_4:49463387-49463406 | None:intergenic | 55.0% | |
| CTTCTTCTGGGCTGCGAAGA+AGG | - | chr8_4:49463385-49463404 | Msa1330330:intron | 55.0% | |
| GAGCATAGCTTGGCAAGCAC+AGG | - | chr8_4:49464401-49464420 | Msa1330330:intron | 55.0% | |
| GTGGGGCGGAGGAGAATGTA+CGG | + | chr8_4:49457283-49457302 | None:intergenic | 60.0% | |
| ! | TTTTAGACGGAGCGGTGGGG+CGG | + | chr8_4:49457297-49457316 | None:intergenic | 60.0% |
| ! | GGTGCCACGTGTGTGTTGAC+TGG | - | chr8_4:49458282-49458301 | Msa1330330:intron | 60.0% |
| !! | CTGGTCAAGATTGGCCTGGG+GGG | - | chr8_4:49458301-49458320 | Msa1330330:intron | 60.0% |
| CTTCGGTGGTGCAGAGAGAG+AGG | + | chr8_4:49459592-49459611 | None:intergenic | 60.0% | |
| GCACCACATTACTCCCCCAC+TGG | - | chr8_4:49459664-49459683 | Msa1330330:CDS | 60.0% | |
| CTAAGAGGAAGGGAGGCGAG+CGG | + | chr8_4:49459762-49459781 | None:intergenic | 60.0% | |
| GCCTGTCCAGATTTGCCGCT+GGG | - | chr8_4:49461817-49461836 | Msa1330330:intron | 60.0% | |
| CCAAAGCCCAGCGGCAAATC+TGG | + | chr8_4:49461826-49461845 | None:intergenic | 60.0% | |
| CCAGATTTGCCGCTGGGCTT+TGG | - | chr8_4:49461823-49461842 | Msa1330330:intron | 60.0% | |
| !! | CTGAGCCTCTGAGGTCTGCT+TGG | - | chr8_4:49462696-49462715 | Msa1330330:intron | 60.0% |
| GGCGGAGGAGAATGTACGGC+GGG | + | chr8_4:49457279-49457298 | None:intergenic | 65.0% | |
| GGGCGGAGGAGAATGTACGG+CGG | + | chr8_4:49457280-49457299 | None:intergenic | 65.0% | |
| GCGCCAGTGGGGGAGTAATG+TGG | + | chr8_4:49459670-49459689 | None:intergenic | 65.0% | |
| TGGTGTGTGGTGCGCCAGTG+GGG | + | chr8_4:49459681-49459700 | None:intergenic | 65.0% | |
| GTGGTGTGTGGTGCGCCAGT+GGG | + | chr8_4:49459682-49459701 | None:intergenic | 65.0% | |
| GCGAGCTCCGTCGTCAGAGT+CGG | + | chr8_4:49459726-49459745 | None:intergenic | 65.0% | |
| CGCTCGCCTCCCTTCCTCTT+AGG | - | chr8_4:49459760-49459779 | Msa1330330:intron | 65.0% | |
| GGCCTGTCCAGATTTGCCGC+TGG | - | chr8_4:49461816-49461835 | Msa1330330:intron | 65.0% | |
| GCCCAGCGGCAAATCTGGAC+AGG | + | chr8_4:49461821-49461840 | None:intergenic | 65.0% | |
| GTCGCGACCAGCAGCCTCTC+TGG | - | chr8_4:49457251-49457270 | Msa1330330:three_prime_UTR | 70.0% | |
| ATGTACGGCGGGCGCCAGAG+AGG | + | chr8_4:49457268-49457287 | None:intergenic | 70.0% | |
| GGTGTGTGGTGCGCCAGTGG+GGG | + | chr8_4:49459680-49459699 | None:intergenic | 70.0% | |
| GGTGGTGTGTGGTGCGCCAG+TGG | + | chr8_4:49459683-49459702 | None:intergenic | 70.0% | |
| AGAGGAAGGGAGGCGAGCGG+TGG | + | chr8_4:49459759-49459778 | None:intergenic | 70.0% | |
| TAGACGGAGCGGTGGGGCGG+AGG | + | chr8_4:49457294-49457313 | None:intergenic | 75.0% | |
| !! | GGAGGCGAGCGGTGGTGGAG+GGG | + | chr8_4:49459751-49459770 | None:intergenic | 75.0% |
| !! | GGGAGGCGAGCGGTGGTGGA+GGG | + | chr8_4:49459752-49459771 | None:intergenic | 75.0% |
| ! | AGGGAGGCGAGCGGTGGTGG+AGG | + | chr8_4:49459753-49459772 | None:intergenic | 75.0% |
| GGAAGGGAGGCGAGCGGTGG+TGG | + | chr8_4:49459756-49459775 | None:intergenic | 75.0% | |
| ! | GCGGGCGCCAGAGAGGCTGC+TGG | + | chr8_4:49457261-49457280 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 49457187 | 49464805 | 49457187 | ID=Msa1330330;Name=Msa1330330 |
| chr8_4 | mRNA | 49457187 | 49464805 | 49457187 | ID=Msa1330330-mRNA-1;Parent=Msa1330330;Name=Msa1330330-mRNA-1;_AED=0.23;_eAED=0.23;_QI=390|1|1|1|0.66|0.5|10|226|237 |
| chr8_4 | exon | 49457187 | 49457331 | 49457187 | ID=Msa1330330-mRNA-1:exon:14332;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49457361 | 49457618 | 49457361 | ID=Msa1330330-mRNA-1:exon:14331;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49457841 | 49457940 | 49457841 | ID=Msa1330330-mRNA-1:exon:14330;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49458395 | 49458499 | 49458395 | ID=Msa1330330-mRNA-1:exon:14329;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49458580 | 49458689 | 49458580 | ID=Msa1330330-mRNA-1:exon:14328;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49459638 | 49459707 | 49459638 | ID=Msa1330330-mRNA-1:exon:14327;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49461244 | 49461311 | 49461244 | ID=Msa1330330-mRNA-1:exon:14326;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49461682 | 49461767 | 49461682 | ID=Msa1330330-mRNA-1:exon:14325;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49463902 | 49464047 | 49463902 | ID=Msa1330330-mRNA-1:exon:14324;Parent=Msa1330330-mRNA-1 |
| chr8_4 | exon | 49464564 | 49464805 | 49464564 | ID=Msa1330330-mRNA-1:exon:14323;Parent=Msa1330330-mRNA-1 |
| chr8_4 | five_prime_UTR | 49464564 | 49464805 | 49464564 | ID=Msa1330330-mRNA-1:five_prime_utr;Parent=Msa1330330-mRNA-1 |
| chr8_4 | five_prime_UTR | 49463902 | 49464047 | 49463902 | ID=Msa1330330-mRNA-1:five_prime_utr;Parent=Msa1330330-mRNA-1 |
| chr8_4 | five_prime_UTR | 49461766 | 49461767 | 49461766 | ID=Msa1330330-mRNA-1:five_prime_utr;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49461682 | 49461765 | 49461682 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49461244 | 49461311 | 49461244 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49459638 | 49459707 | 49459638 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49458580 | 49458689 | 49458580 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49458395 | 49458499 | 49458395 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49457841 | 49457940 | 49457841 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | CDS | 49457442 | 49457618 | 49457442 | ID=Msa1330330-mRNA-1:cds;Parent=Msa1330330-mRNA-1 |
| chr8_4 | three_prime_UTR | 49457361 | 49457441 | 49457361 | ID=Msa1330330-mRNA-1:three_prime_utr;Parent=Msa1330330-mRNA-1 |
| chr8_4 | three_prime_UTR | 49457187 | 49457331 | 49457187 | ID=Msa1330330-mRNA-1:three_prime_utr;Parent=Msa1330330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
