AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333280 MtrunA17_Chr4g0068991 87.834 337 14 2 79 388 1 337 0.0 588
Msa1333280 MtrunA17_Chr5g0400061 42.598 331 165 6 79 388 1 327 1.77e-81 273
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333280 AT1G48090.5 70.623 337 71 3 79 388 1 336 3.19e-155 485
Msa1333280 AT1G48090.6 70.623 337 71 3 79 388 1 336 3.23e-155 485
Msa1333280 AT1G48090.4 70.623 337 71 3 79 388 1 336 3.23e-155 485
Msa1333280 AT1G48090.3 65.738 359 73 3 79 388 1 358 3.63e-152 477
Msa1333280 AT1G48090.2 63.989 361 80 3 77 388 18 377 1.66e-148 466
Msa1333280 AT1G48090.1 63.989 361 80 3 77 388 18 377 1.70e-148 466
Msa1333280 AT4G17140.1 42.296 331 166 4 79 388 1 327 4.02e-79 266
Msa1333280 AT4G17140.3 42.296 331 166 4 79 388 1 327 4.10e-79 266
Msa1333280 AT4G17140.2 42.296 331 166 4 79 388 1 327 4.30e-79 266
Msa1333280 AT5G24740.3 27.746 346 170 14 79 384 1 306 3.53e-24 105
Msa1333280 AT5G24740.2 27.746 346 170 14 79 384 1 306 3.94e-24 105
Msa1333280 AT5G24740.1 27.746 346 170 14 79 384 1 306 4.05e-24 105
Msa1333280 AT5G24740.4 27.746 346 170 14 79 384 1 306 4.32e-24 105
Msa1333280 AT5G24740.5 27.746 346 170 14 79 384 1 306 4.73e-24 105

Find 104 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTTGCTTCGAAAATATT+TGG 0.086443 8_4:+53341354 Msa1333280:CDS
CATGAAGAAATGAGAGAATT+AGG 0.166384 8_4:-53341082 None:intergenic
ATATGGAAGTTTCTCATTTA+CGG 0.270304 8_4:+53349187 Msa1333280:CDS
CTAATTCTCTCATTTCTTCA+TGG 0.272396 8_4:+53341083 Msa1333280:CDS
TCTCAGGATCACTTCTTTCT+TGG 0.283250 8_4:-53348705 None:intergenic
CGCTGTTACAATGGATGAAC+AGG 0.294854 8_4:+53346703 Msa1333280:CDS
ATGAAGGAAATTAGAAGAAT+TGG 0.300991 8_4:-53340952 None:intergenic
ATAGGTTCCTTGGAAAAGTT+TGG 0.312004 8_4:+53343025 Msa1333280:intron
CCCACTTTGACACCGACTTA+TGG 0.327314 8_4:-53348618 None:intergenic
ACCTTTATAGTCCGGCTATC+AGG 0.330166 8_4:-53343104 None:intergenic
AAGCCAGATTTGACAGTAAC+AGG 0.335990 8_4:-53342647 None:intergenic
CTTCCTGTTACTGTCAAATC+TGG 0.342632 8_4:+53342644 Msa1333280:CDS
TAGGTTCCTTGGAAAAGTTT+GGG 0.353221 8_4:+53343026 Msa1333280:intron
AAAGTCACACCTGAAGAAAA+TGG 0.353908 8_4:-53346668 None:intergenic
CATTTGCTTCGAAAATATTT+GGG 0.358334 8_4:+53341355 Msa1333280:CDS
GCATACTGCCACCACAAATA+AGG 0.360795 8_4:-53349233 None:intergenic
AGTGCGATCAGAGGGGAAAT+AGG 0.383170 8_4:-53341113 None:intergenic
CAATTTGCTGAAGCTTGTCT+TGG 0.385528 8_4:-53343224 None:intergenic
TTCAAGATACAAGACATATA+TGG 0.389010 8_4:+53349170 Msa1333280:CDS
TCCTGATAGCCGGACTATAA+AGG 0.389588 8_4:+53343103 Msa1333280:CDS
ATGATTCTGACCGGCTTCCT+TGG 0.391036 8_4:+53348380 Msa1333280:CDS
ATGAAGAAATGAGAGAATTA+GGG 0.393010 8_4:-53341081 None:intergenic
CTTCGAACATGATGAATAAT+CGG 0.397205 8_4:-53341145 None:intergenic
ACTTTAGTTTCAAATCTTTG+AGG 0.407612 8_4:-53342598 None:intergenic
ACTGTCAAATCTGGCTTTGT+TGG 0.413094 8_4:+53342653 Msa1333280:CDS
TGATTCTGACCGGCTTCCTT+GGG 0.421383 8_4:+53348381 Msa1333280:CDS
CTATAATGTAATAGGTTCCT+TGG 0.429634 8_4:+53343015 Msa1333280:intron
ATTACCACATCTTCAGCTGC+TGG 0.431556 8_4:-53349271 None:intergenic
TCTCAAGGGCTCCTTATTTG+TGG 0.433588 8_4:+53349222 Msa1333280:CDS
AGGCGTTGAGAATAAGTGTT+TGG 0.434488 8_4:+53341404 Msa1333280:CDS
TAAGCGGTGATGCGTAGAAA+TGG 0.443651 8_4:-53341047 None:intergenic
ACTTTCTCAAACGGAATCTC+AGG 0.448294 8_4:-53348721 None:intergenic
GGCTATGAACCGGACATACT+TGG 0.449920 8_4:+53348639 Msa1333280:CDS
CTCTTTATCATGATTCTGAC+CGG 0.450185 8_4:+53348371 Msa1333280:CDS
CTTGGGAGATTGACAAGAGA+TGG 0.451596 8_4:+53348398 Msa1333280:CDS
TACATTTCCCAACTTGGACT+TGG 0.452581 8_4:-53345319 None:intergenic
TATTGTAGGACTGCATTGAT+AGG 0.453778 8_4:-53348667 None:intergenic
GAAAAGTTTGGGGAAAGAAC+CGG 0.455876 8_4:+53343037 Msa1333280:CDS
ATATGTCTTGTATCTTGAAA+CGG 0.456168 8_4:-53349166 None:intergenic
CGGCCTTCAGTTCCATCTCA+AGG 0.456856 8_4:+53349207 Msa1333280:CDS
TGAAATGAAAATGAAAATGA+AGG 0.460350 8_4:-53340968 None:intergenic
AAGTCATACATTTCCCAACT+TGG 0.467358 8_4:-53345325 None:intergenic
TACAGGCTCAGTATCATGAT+TGG 0.467529 8_4:+53349127 Msa1333280:intron
TCATGATTGGATAAAGCTCT+TGG 0.468731 8_4:+53349140 Msa1333280:CDS
GTCCTACAATATCATCGTCT+TGG 0.471804 8_4:+53348679 Msa1333280:CDS
ACCTGAAGAAAATGGATGGC+CGG 0.472763 8_4:-53346660 None:intergenic
GCAATATCCAAGTCCAAGTT+GGG 0.473850 8_4:+53345312 Msa1333280:CDS
TGCAATATCCAAGTCCAAGT+TGG 0.476101 8_4:+53345311 Msa1333280:CDS
CTTTACCAGATATTTGAAGA+TGG 0.492891 8_4:+53348574 Msa1333280:intron
TGTCAAAGTGGGCTATGAAC+CGG 0.497616 8_4:+53348629 Msa1333280:CDS
GAAGATAGAGTGCGATCAGA+GGG 0.499827 8_4:-53341121 None:intergenic
CCTGAAGAAAATGGATGGCC+GGG 0.504762 8_4:-53346659 None:intergenic
AGGATATCAGTCCACATGAA+TGG 0.506585 8_4:+53348422 Msa1333280:CDS
CAGTCCACATGAATGGATTG+AGG 0.507803 8_4:+53348429 Msa1333280:CDS
ACTAGTGAAACTTTCTCAAA+CGG 0.508738 8_4:-53348730 None:intergenic
AGTGTTGTTTGCAGTAATCC+CGG 0.511751 8_4:+53346641 Msa1333280:intron
ACTTCTGTACCTTTATAGTC+CGG 0.515978 8_4:-53343112 None:intergenic
AAGAGCTAGCCTCTCAATCA+AGG 0.519592 8_4:-53348353 None:intergenic
TGTTGGTACCATCACATTGA+AGG 0.521608 8_4:+53342670 Msa1333280:CDS
TTCCAAGACGATGATATTGT+AGG 0.526174 8_4:-53348681 None:intergenic
ATAGTCCGGCTATCAGGAGC+GGG 0.530689 8_4:-53343098 None:intergenic
CTAATCCCGCTCCTGATAGC+CGG 0.533230 8_4:+53343093 Msa1333280:CDS
CAAGGGCTCCTTATTTGTGG+TGG 0.534678 8_4:+53349225 Msa1333280:CDS
TAGGATAAACCAAGTATGTC+CGG 0.538302 8_4:-53348648 None:intergenic
AGAAGATAGAGTGCGATCAG+AGG 0.539454 8_4:-53341122 None:intergenic
TCAGATATGAAGATTCTGTC+AGG 0.540621 8_4:+53346500 Msa1333280:CDS
TGTCAATCTCCCAAGGAAGC+CGG 0.543879 8_4:-53348390 None:intergenic
GAAAGTTTCACTAGTCCTCT+CGG 0.551045 8_4:+53348738 Msa1333280:CDS
TTGGGAGATTGACAAGAGAT+GGG 0.553089 8_4:+53348399 Msa1333280:CDS
TAAGCTTGCCGCTGTTACAA+TGG 0.555067 8_4:+53346694 Msa1333280:CDS
GGCCTTCAGTTCCATCTCAA+GGG 0.565963 8_4:+53349208 Msa1333280:CDS
AGCCCTTGAGATGGAACTGA+AGG 0.573633 8_4:-53349210 None:intergenic
TTGAGAATAAGTGTTTGGAA+AGG 0.583382 8_4:+53341409 Msa1333280:CDS
AGACAAGCTTCAGCAAATTG+AGG 0.587836 8_4:+53343227 Msa1333280:CDS
TGACACCGACTTATGGTGAT+CGG 0.591480 8_4:-53348611 None:intergenic
CCATAAGTCGGTGTCAAAGT+GGG 0.591954 8_4:+53348618 Msa1333280:CDS
AGTCATGCACCTTGATTGAG+AGG 0.592356 8_4:+53348344 Msa1333280:intron
CATCTCTTGTCAATCTCCCA+AGG 0.592943 8_4:-53348397 None:intergenic
TTATTTGTGGTGGCAGTATG+CGG 0.595548 8_4:+53349235 Msa1333280:CDS
AGGTTCCTTGGAAAAGTTTG+GGG 0.599273 8_4:+53343027 Msa1333280:intron
CAAATAAGGAGCCCTTGAGA+TGG 0.599605 8_4:-53349219 None:intergenic
ACCATAAGTCGGTGTCAAAG+TGG 0.601134 8_4:+53348617 Msa1333280:CDS
TCACACCTGAAGAAAATGGA+TGG 0.616151 8_4:-53346664 None:intergenic
TATTTGGGCGAATATGTACA+TGG 0.621580 8_4:+53341370 Msa1333280:CDS
TGTCTCTCTTACTCTTACCG+AGG 0.621788 8_4:+53348762 Msa1333280:CDS
GATCAGAGGGGAAATAGGAA+AGG 0.623961 8_4:-53341108 None:intergenic
ACCGACTTATGGTGATCGGT+AGG 0.624796 8_4:-53348607 None:intergenic
TAGGGTTTGATTGTTGTAAG+CGG 0.625118 8_4:-53341063 None:intergenic
CTGTTCATCCATTGTAACAG+CGG 0.634956 8_4:-53346702 None:intergenic
CGATCGATTAGAACAATCAC+CGG 0.638666 8_4:-53343056 None:intergenic
AGAAGAAGTTAACCCGCGGA+GGG 0.643534 8_4:+53340916 None:intergenic
AAATGCTACCTTCAATGTGA+TGG 0.644677 8_4:-53342678 None:intergenic
TATAGTCCGGCTATCAGGAG+CGG 0.647423 8_4:-53343099 None:intergenic
AGATTTGAAACTAAAGTCAG+AGG 0.658070 8_4:+53342604 Msa1333280:CDS
CAAACCTCAATCCATTCATG+TGG 0.663571 8_4:-53348433 None:intergenic
GGAGATTGACAAGAGATGGG+AGG 0.668357 8_4:+53348402 Msa1333280:CDS
GCCTACCGATCACCATAAGT+CGG 0.669607 8_4:+53348606 Msa1333280:CDS
TAGAAGAAGTTAACCCGCGG+AGG 0.674621 8_4:+53340915 None:intergenic
TGTACATGGACTCTCTGCGG+AGG 0.691359 8_4:+53341384 Msa1333280:CDS
AAGATAGAGTGCGATCAGAG+GGG 0.697544 8_4:-53341120 None:intergenic
ATATGTACATGGACTCTCTG+CGG 0.715955 8_4:+53341381 Msa1333280:CDS
GCTGTTACAATGGATGAACA+GGG 0.719379 8_4:+53346704 Msa1333280:CDS
ACTTAGAAGAAGTTAACCCG+CGG 0.737458 8_4:+53340912 None:intergenic
GAGTAAGAGAGACATCCGAG+AGG 0.741029 8_4:-53348753 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG - chr8_4:53348950-53348969 None:intergenic 0.0%
!!! TTTTATTACTTCTTTATATT+TGG + chr8_4:53341859-53341878 Msa1333280:intron 10.0%
!!! TTTTTTTTTTGATATTCAAA+TGG + chr8_4:53342268-53342287 Msa1333280:intron 10.0%
!!! TAATATTATGTGTTTTTATA+TGG + chr8_4:53342385-53342404 Msa1333280:intron 10.0%
!!! AAAGTGAATAAATTTTTTAT+AGG + chr8_4:53344865-53344884 Msa1333280:intron 10.0%
!!! AAGTGAATAAATTTTTTATA+GGG + chr8_4:53344866-53344885 Msa1333280:intron 10.0%
!!! CTTTTAAACAAAATAAAAAA+GGG - chr8_4:53344940-53344959 None:intergenic 10.0%
!!! TCTTTTAAACAAAATAAAAA+AGG - chr8_4:53344941-53344960 None:intergenic 10.0%
!! TAGCCAAATAATATATTAAT+GGG - chr8_4:53341602-53341621 None:intergenic 15.0%
!!! GTCATTTTTTCAAATTAAAT+CGG - chr8_4:53342074-53342093 None:intergenic 15.0%
!! CACATAATATTAAAATGTAA+AGG - chr8_4:53342377-53342396 None:intergenic 15.0%
!!! ATTTGATAACATTTGTTTTA+AGG + chr8_4:53343281-53343300 Msa1333280:intron 15.0%
!! TTTAGAAATACAATCATTTA+TGG + chr8_4:53343555-53343574 Msa1333280:intron 15.0%
!! TTAGAAATACAATCATTTAT+GGG + chr8_4:53343556-53343575 Msa1333280:intron 15.0%
!!! TTTATCTAACTTTTTCATAA+AGG - chr8_4:53343747-53343766 None:intergenic 15.0%
!! ATGAAAAAGTTAGATAAAAT+TGG + chr8_4:53343749-53343768 Msa1333280:intron 15.0%
!! AGAAATTATTATTAACTAAG+CGG - chr8_4:53344089-53344108 None:intergenic 15.0%
!!! TTTTAACCCAATAAAAAATT+GGG - chr8_4:53344118-53344137 None:intergenic 15.0%
!!! ATTTTAACCCAATAAAAAAT+TGG - chr8_4:53344119-53344138 None:intergenic 15.0%
!! ATCATCATTAAAACTTTATA+AGG - chr8_4:53344184-53344203 None:intergenic 15.0%
!! TATTACAAACTTCAATATTA+TGG - chr8_4:53344216-53344235 None:intergenic 15.0%
!! TAATATTGAAGTTTGTAATA+AGG + chr8_4:53344216-53344235 Msa1333280:intron 15.0%
!! AATATTGAAGTTTGTAATAA+GGG + chr8_4:53344217-53344236 Msa1333280:intron 15.0%
!! AAGATAAAAGTAATAAAATC+TGG - chr8_4:53344480-53344499 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGATTA+AGG + chr8_4:53344610-53344629 Msa1333280:intron 15.0%
!!! TAGAAGTAAATTATTTTTGT+AGG + chr8_4:53344670-53344689 Msa1333280:intron 15.0%
!!! AGAAGTAAATTATTTTTGTA+GGG + chr8_4:53344671-53344690 Msa1333280:intron 15.0%
!! AGTACTATTAAAATTAAGTA+AGG + chr8_4:53344700-53344719 Msa1333280:intron 15.0%
!!! TGTAAAAAGTTTTCAAAATA+GGG - chr8_4:53344789-53344808 None:intergenic 15.0%
!!! TTGTAAAAAGTTTTCAAAAT+AGG - chr8_4:53344790-53344809 None:intergenic 15.0%
!! ATATTACAAAAATACATGTT+AGG - chr8_4:53345222-53345241 None:intergenic 15.0%
!!! AAAGATAATGAATGTTTTAT+TGG - chr8_4:53345730-53345749 None:intergenic 15.0%
!! ATAAAATATCTCAACAAAAA+AGG - chr8_4:53346781-53346800 None:intergenic 15.0%
!! CAATTTAATTAAATTAGAAG+TGG - chr8_4:53348066-53348085 None:intergenic 15.0%
!! TAATTGAAAAATAAATACCT+CGG - chr8_4:53348782-53348801 None:intergenic 15.0%
!! ATGAATATAATTAAGAGTAA+AGG + chr8_4:53348847-53348866 Msa1333280:intron 15.0%
!!! AGAAGAATTGGTTTTTATAT+AGG - chr8_4:53340943-53340962 None:intergenic 20.0%
!! TGAAATGAAAATGAAAATGA+AGG - chr8_4:53340971-53340990 None:intergenic 20.0%
!!! TCAAGATTTATTTTGCTTTT+GGG - chr8_4:53341550-53341569 None:intergenic 20.0%
!!! TTCAAGATTTATTTTGCTTT+TGG - chr8_4:53341551-53341570 None:intergenic 20.0%
!! TACCCCATTAATATATTATT+TGG + chr8_4:53341596-53341615 Msa1333280:intron 20.0%
!! AGCCAAATAATATATTAATG+GGG - chr8_4:53341601-53341620 None:intergenic 20.0%
!! GTAGCCAAATAATATATTAA+TGG - chr8_4:53341603-53341622 None:intergenic 20.0%
!! TTTGAATCAACAAAATTGTT+TGG - chr8_4:53341627-53341646 None:intergenic 20.0%
!! TGAGGTTAAATTAGTAATTA+TGG + chr8_4:53341920-53341939 Msa1333280:intron 20.0%
!!! AGTTTTAGATAGATATTTTG+TGG + chr8_4:53342179-53342198 Msa1333280:intron 20.0%
!!! GTTTTAGATAGATATTTTGT+GGG + chr8_4:53342180-53342199 Msa1333280:intron 20.0%
!! GATGAATTCATTCAATAAAA+AGG - chr8_4:53342440-53342459 None:intergenic 20.0%
!! GATAATTATACAAACATGAA+TGG + chr8_4:53342785-53342804 Msa1333280:intron 20.0%
!! GTTTAGTTGTGTAAAATATA+TGG + chr8_4:53342834-53342853 Msa1333280:intron 20.0%
!!! AATTGAGCTTATTTTATTAC+AGG + chr8_4:53343179-53343198 Msa1333280:intron 20.0%
!! AAATATATTACACAATTGAC+CGG - chr8_4:53343325-53343344 None:intergenic 20.0%
!!! TAAAAGGTCTCAATTTTATA+AGG - chr8_4:53344259-53344278 None:intergenic 20.0%
!! AAGTAAAGACTAAACTTAAA+AGG - chr8_4:53344275-53344294 None:intergenic 20.0%
!!! TTAGAAGTTCTCAATTTTAT+AGG + chr8_4:53344730-53344749 Msa1333280:intron 20.0%
!!! TAGAAGTTCTCAATTTTATA+GGG + chr8_4:53344731-53344750 Msa1333280:intron 20.0%
!!! TACATTTTATAGGACAATTT+TGG - chr8_4:53344834-53344853 None:intergenic 20.0%
!! TTGTCCTATAAAATGTAAAT+AGG + chr8_4:53344837-53344856 Msa1333280:intron 20.0%
!! TGTCCTATAAAATGTAAATA+GGG + chr8_4:53344838-53344857 Msa1333280:intron 20.0%
!!! TTGAAAGTTTGTAATTTTGT+AGG + chr8_4:53344896-53344915 Msa1333280:intron 20.0%
!!! TGAAAGTTTGTAATTTTGTA+GGG + chr8_4:53344897-53344916 Msa1333280:intron 20.0%
!! ATAACATGAAGAGAAAAAAA+GGG - chr8_4:53345400-53345419 None:intergenic 20.0%
!! AATAACATGAAGAGAAAAAA+AGG - chr8_4:53345401-53345420 None:intergenic 20.0%
!!! AATAAATAAGGGTATATAAG+TGG - chr8_4:53345755-53345774 None:intergenic 20.0%
!! AGTTGAGATACAATAAATAA+GGG - chr8_4:53345766-53345785 None:intergenic 20.0%
!!! TTCATAATATGTGTCTTTTA+AGG - chr8_4:53345897-53345916 None:intergenic 20.0%
!! TTAATAGTTGAGTACATATA+TGG + chr8_4:53346210-53346229 Msa1333280:intron 20.0%
!! TAATAGTTGAGTACATATAT+GGG + chr8_4:53346211-53346230 Msa1333280:intron 20.0%
!!! ATTAAGTCAGTACTTTTATT+GGG + chr8_4:53346292-53346311 Msa1333280:intron 20.0%
!!! ATAATTTGGTTTACTTAAAC+AGG - chr8_4:53346825-53346844 None:intergenic 20.0%
!! CTAGATCAAAAAACAAATAA+TGG - chr8_4:53346854-53346873 None:intergenic 20.0%
!! ATTTCATAATTTAGTGATAG+AGG + chr8_4:53346950-53346969 Msa1333280:intron 20.0%
!!! CTTTCTGCATTTTTTTTAAA+GGG - chr8_4:53347097-53347116 None:intergenic 20.0%
!!! ACTTTCTGCATTTTTTTTAA+AGG - chr8_4:53347098-53347117 None:intergenic 20.0%
!! ACATTAAAATGGAATAATTG+GGG - chr8_4:53347231-53347250 None:intergenic 20.0%
!! GACATTAAAATGGAATAATT+GGG - chr8_4:53347232-53347251 None:intergenic 20.0%
!! AGACATTAAAATGGAATAAT+TGG - chr8_4:53347233-53347252 None:intergenic 20.0%
!! TTTAATTAAATTAGAAGTGG+AGG - chr8_4:53348063-53348082 None:intergenic 20.0%
!! TTGTCTAATTTGATAAATTC+CGG + chr8_4:53348453-53348472 Msa1333280:intron 20.0%
!! ACTCTTAATTATATTCATGT+TGG - chr8_4:53348845-53348864 None:intergenic 20.0%
! ATGAAGGAAATTAGAAGAAT+TGG - chr8_4:53340955-53340974 None:intergenic 25.0%
! ATGAAGAAATGAGAGAATTA+GGG - chr8_4:53341084-53341103 None:intergenic 25.0%
!! CAATCTTTCTTTTTATGCTT+CGG + chr8_4:53341242-53341261 Msa1333280:intron 25.0%
! CATTTGCTTCGAAAATATTT+GGG + chr8_4:53341355-53341374 Msa1333280:CDS 25.0%
!!! CAATTTTGTTGATTCAAAGA+TGG + chr8_4:53341629-53341648 Msa1333280:intron 25.0%
!!! TCAAAGCTAAAAAGTATCTT+AGG - chr8_4:53342219-53342238 None:intergenic 25.0%
!!! TAAGATACTTTTTAGCTTTG+AGG + chr8_4:53342218-53342237 Msa1333280:intron 25.0%
!!! TTCAATAAAAAGGTATTTGC+TGG - chr8_4:53342430-53342449 None:intergenic 25.0%
!! ACTTTAGTTTCAAATCTTTG+AGG - chr8_4:53342601-53342620 None:intergenic 25.0%
! TAAGCAAAAGATACAAACAT+TGG - chr8_4:53343160-53343179 None:intergenic 25.0%
!! AGATAAAATTGGTCTATCTT+TGG + chr8_4:53343760-53343779 Msa1333280:intron 25.0%
!! TGAAAACTCTTGATTTTGTT+GGG - chr8_4:53344153-53344172 None:intergenic 25.0%
!! TTGAAAACTCTTGATTTTGT+TGG - chr8_4:53344154-53344173 None:intergenic 25.0%
! TACAAACTTCAATATTATGG+AGG - chr8_4:53344213-53344232 None:intergenic 25.0%
!!! TGAGTGCATAATTTTTTTGT+CGG - chr8_4:53344320-53344339 None:intergenic 25.0%
! AAACAAATTTGAATTGAGCA+GGG - chr8_4:53344351-53344370 None:intergenic 25.0%
! TAAACAAATTTGAATTGAGC+AGG - chr8_4:53344352-53344371 None:intergenic 25.0%
!!! TAAACAAACTTTGTTTTAGC+AGG + chr8_4:53344638-53344657 Msa1333280:intron 25.0%
!!! AAACAAACTTTGTTTTAGCA+GGG + chr8_4:53344639-53344658 Msa1333280:intron 25.0%
!! TACAAGGGTAAATATGTTTT+TGG - chr8_4:53344758-53344777 None:intergenic 25.0%
! AATAGGGACTATTATTACAA+GGG - chr8_4:53344773-53344792 None:intergenic 25.0%
! AAATAGGGACTATTATTACA+AGG - chr8_4:53344774-53344793 None:intergenic 25.0%
!! ATTTTATAGGACAATTTTGG+AGG - chr8_4:53344831-53344850 None:intergenic 25.0%
! GTCCTATAAAATGTAAATAG+GGG + chr8_4:53344839-53344858 Msa1333280:intron 25.0%
! TTTAAAAGACACACTACTAA+AGG + chr8_4:53344952-53344971 Msa1333280:intron 25.0%
!! ATTTGGTTTCATGTAAAATC+AGG + chr8_4:53345127-53345146 Msa1333280:intron 25.0%
! GAAATGAATCAGAAAAGAAA+AGG - chr8_4:53345156-53345175 None:intergenic 25.0%
! AAATACATGTTAGGAAATGA+AGG - chr8_4:53345213-53345232 None:intergenic 25.0%
! ATGAGACACATAATATAAGA+CGG - chr8_4:53345669-53345688 None:intergenic 25.0%
! GAGTTGAGATACAATAAATA+AGG - chr8_4:53345767-53345786 None:intergenic 25.0%
! TCGTTATTAATAACAGTTGA+TGG - chr8_4:53345801-53345820 None:intergenic 25.0%
!!! CACTTTTTAAGAAAGTCATT+GGG - chr8_4:53345867-53345886 None:intergenic 25.0%
!!! ACACTTTTTAAGAAAGTCAT+TGG - chr8_4:53345868-53345887 None:intergenic 25.0%
! AGAAGTTTACAAAAAAGGAA+TGG - chr8_4:53346028-53346047 None:intergenic 25.0%
! CAAGAAGAAGTTTACAAAAA+AGG - chr8_4:53346033-53346052 None:intergenic 25.0%
!!! CTTTTTTGTAAACTTCTTCT+TGG + chr8_4:53346031-53346050 Msa1333280:intron 25.0%
!!! AAAGGTATCAATGATTAGTT+GGG - chr8_4:53346161-53346180 None:intergenic 25.0%
! TCAACTATTAAACAAGGTTA+AGG - chr8_4:53346201-53346220 None:intergenic 25.0%
! ATGTACTCAACTATTAAACA+AGG - chr8_4:53346207-53346226 None:intergenic 25.0%
! TTAGATAAAACAAAATCCTC+GGG - chr8_4:53346262-53346281 None:intergenic 25.0%
! CTTAGATAAAACAAAATCCT+CGG - chr8_4:53346263-53346282 None:intergenic 25.0%
!! GATTAAGTCAGTACTTTTAT+TGG + chr8_4:53346291-53346310 Msa1333280:intron 25.0%
! TGTCAGTCAAATTATTTCAA+GGG - chr8_4:53346382-53346401 None:intergenic 25.0%
!! AATGAAACTTTTGATACTAG+TGG + chr8_4:53346727-53346746 Msa1333280:CDS 25.0%
! AATAATGGCAAGTCATAATT+TGG - chr8_4:53346839-53346858 None:intergenic 25.0%
! AAGTAAAAACTCCAAAATCT+TGG + chr8_4:53347010-53347029 Msa1333280:intron 25.0%
! AATAAAGTCAATAACTGAGA+TGG + chr8_4:53347053-53347072 Msa1333280:intron 25.0%
! AATTGGGGTGATAATAAAAA+GGG - chr8_4:53347216-53347235 None:intergenic 25.0%
! TAATTGGGGTGATAATAAAA+AGG - chr8_4:53347217-53347236 None:intergenic 25.0%
!!! TATTCCATTTTAATGTCTAC+TGG + chr8_4:53347235-53347254 Msa1333280:intron 25.0%
! CTAAACAAGTGTTTATAAGT+GGG + chr8_4:53347308-53347327 Msa1333280:intron 25.0%
! TAAACAAGTGTTTATAAGTG+GGG + chr8_4:53347309-53347328 Msa1333280:intron 25.0%
! ATAGTAAGTCTTAGAAATTG+TGG - chr8_4:53347602-53347621 None:intergenic 25.0%
! GACAACTGCTATTATTAATA+AGG + chr8_4:53347672-53347691 Msa1333280:intron 25.0%
!! CAATTAAGAGAATTTTCGAT+AGG - chr8_4:53347736-53347755 None:intergenic 25.0%
! CTATCGAAAATTCTCTTAAT+TGG + chr8_4:53347734-53347753 Msa1333280:intron 25.0%
! ATGGCAAAAGAGTAAAATAT+AGG - chr8_4:53347801-53347820 None:intergenic 25.0%
!! TATTTTACTCTTTTGCCATA+TGG + chr8_4:53347802-53347821 Msa1333280:intron 25.0%
! AAGGACAAAATATATCAAAG+AGG - chr8_4:53348036-53348055 None:intergenic 25.0%
!!! TTCTCTCTAAAAGTTTTTCT+AGG - chr8_4:53348114-53348133 None:intergenic 25.0%
!!! AACTTTTAGAGAGAACTATT+AGG + chr8_4:53348119-53348138 Msa1333280:intron 25.0%
! TATGTAACACAATGAATATC+CGG - chr8_4:53348475-53348494 None:intergenic 25.0%
!!! AACTAGATTTTTTATCAGCA+TGG + chr8_4:53348507-53348526 Msa1333280:intron 25.0%
! GTATGATATCAAAACAGATT+AGG - chr8_4:53348920-53348939 None:intergenic 25.0%
! CAAAACAAACAGTAATTTCA+AGG - chr8_4:53349090-53349109 None:intergenic 25.0%
! ATATGTCTTGTATCTTGAAA+CGG - chr8_4:53349169-53349188 None:intergenic 25.0%
! TTCAAGATACAAGACATATA+TGG + chr8_4:53349170-53349189 Msa1333280:CDS 25.0%
! ATATGGAAGTTTCTCATTTA+CGG + chr8_4:53349187-53349206 Msa1333280:CDS 25.0%
CATGAAGAAATGAGAGAATT+AGG - chr8_4:53341085-53341104 None:intergenic 30.0%
CTAATTCTCTCATTTCTTCA+TGG + chr8_4:53341083-53341102 Msa1333280:CDS 30.0%
CTTCGAACATGATGAATAAT+CGG - chr8_4:53341148-53341167 None:intergenic 30.0%
GAAACGGAAAATTGAAATTG+AGG - chr8_4:53341210-53341229 None:intergenic 30.0%
ATTGCGTACACAAATTGAAA+CGG - chr8_4:53341226-53341245 None:intergenic 30.0%
!! TTGATTTTGCTTTTGTTCAC+AGG + chr8_4:53341327-53341346 Msa1333280:intron 30.0%
GCATTTGCTTCGAAAATATT+TGG + chr8_4:53341354-53341373 Msa1333280:CDS 30.0%
TTGAGAATAAGTGTTTGGAA+AGG + chr8_4:53341409-53341428 Msa1333280:CDS 30.0%
AGAATGCAAAATTTCAGCAT+AGG - chr8_4:53341483-53341502 None:intergenic 30.0%
TATATTTAATGAAGCGACAG+TGG - chr8_4:53341775-53341794 None:intergenic 30.0%
TAATTTAACCTCAGAATCAG+CGG - chr8_4:53341913-53341932 None:intergenic 30.0%
TAGTAATTATGGATAACCTG+AGG + chr8_4:53341931-53341950 Msa1333280:intron 30.0%
! TAGATAGATATTTTGTGGGA+TGG + chr8_4:53342184-53342203 Msa1333280:intron 30.0%
! AGATAGATATTTTGTGGGAT+GGG + chr8_4:53342185-53342204 Msa1333280:intron 30.0%
TTGATGTGATTTACGAACTA+TGG + chr8_4:53342307-53342326 Msa1333280:intron 30.0%
TTCATCTCAAAATACAATGC+TGG + chr8_4:53342454-53342473 Msa1333280:intron 30.0%
AATTTCACATTTCTCCGAAA+TGG + chr8_4:53342506-53342525 Msa1333280:intron 30.0%
CAATAGAGTACAAACCATTT+CGG - chr8_4:53342523-53342542 None:intergenic 30.0%
! AAATGGTTTGTACTCTATTG+AGG + chr8_4:53342523-53342542 Msa1333280:intron 30.0%
! AGATTTGAAACTAAAGTCAG+AGG + chr8_4:53342604-53342623 Msa1333280:CDS 30.0%
AAGGTAGCATTTAACATTTC+TGG + chr8_4:53342689-53342708 Msa1333280:intron 30.0%
TAACCTTTGACTCATTACTT+TGG + chr8_4:53342719-53342738 Msa1333280:intron 30.0%
AATCCAAAGTAATGAGTCAA+AGG - chr8_4:53342725-53342744 None:intergenic 30.0%
CTATTACATTATAGAGAGTG+AGG - chr8_4:53343009-53343028 None:intergenic 30.0%
CTCACTCTCTATAATGTAAT+AGG + chr8_4:53343007-53343026 Msa1333280:intron 30.0%
CTATAATGTAATAGGTTCCT+TGG + chr8_4:53343015-53343034 Msa1333280:intron 30.0%
!!! TGAGCTTATTTTATTACAGG+AGG + chr8_4:53343182-53343201 Msa1333280:intron 30.0%
! ATTGTATTTCTAAACCTACC+AGG - chr8_4:53343549-53343568 None:intergenic 30.0%
GAAATACAATCATTTATGGG+AGG + chr8_4:53343559-53343578 Msa1333280:intron 30.0%
AATTGCAGAAAAGATTGTAG+AGG + chr8_4:53343596-53343615 Msa1333280:intron 30.0%
ACACATGTTTAAACTACCTA+AGG - chr8_4:53343626-53343645 None:intergenic 30.0%
TTAGGTAGTTTAAACATGTG+TGG + chr8_4:53343625-53343644 Msa1333280:intron 30.0%
TTTGGACTCAATACATGATA+GGG + chr8_4:53343778-53343797 Msa1333280:intron 30.0%
! GTTTTCTGTAATTGATACTG+AGG - chr8_4:53343928-53343947 None:intergenic 30.0%
GTATTTGAACTAGTTCCTTA+AGG - chr8_4:53344036-53344055 None:intergenic 30.0%
!!! TCCGTTTCCCAATTTTTTAT+TGG + chr8_4:53344108-53344127 Msa1333280:intron 30.0%
CCCAATAAAAAATTGGGAAA+CGG - chr8_4:53344112-53344131 None:intergenic 30.0%
!!! CCGTTTCCCAATTTTTTATT+GGG + chr8_4:53344109-53344128 Msa1333280:intron 30.0%
!!! GAGTGCATAATTTTTTTGTC+GGG - chr8_4:53344319-53344338 None:intergenic 30.0%
!!! TTTGCGATAATTTTTTGCTG+AGG - chr8_4:53344443-53344462 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr8_4:53344576-53344595 None:intergenic 30.0%
! AGCCCCTATTTACATTTTAT+AGG - chr8_4:53344844-53344863 None:intergenic 30.0%
GGAAAATAAAGTGATTAGCA+AGG + chr8_4:53345052-53345071 Msa1333280:intron 30.0%
!! AAGGCATTTGTGAACTATTT+TGG - chr8_4:53345572-53345591 None:intergenic 30.0%
ACTGCTTAAATGAACTTATC+TGG + chr8_4:53346055-53346074 Msa1333280:intron 30.0%
GAATTATGTATGAATTGCCT+AGG + chr8_4:53346077-53346096 Msa1333280:intron 30.0%
!! GAAAGGTATCAATGATTAGT+TGG - chr8_4:53346162-53346181 None:intergenic 30.0%
CTGTCAGTCAAATTATTTCA+AGG - chr8_4:53346383-53346402 None:intergenic 30.0%
TCTCTGATCTCTACAATTAT+TGG + chr8_4:53346445-53346464 Msa1333280:intron 30.0%
GAATGAAATGTCAATATGCA+TGG - chr8_4:53346559-53346578 None:intergenic 30.0%
! TTTTATGAACCTTCTATCGA+AGG + chr8_4:53346795-53346814 Msa1333280:intron 30.0%
! GGTATTGTTACTTCTGTATT+GGG + chr8_4:53346897-53346916 Msa1333280:intron 30.0%
TCATAATTTAGTGATAGAGG+TGG + chr8_4:53346953-53346972 Msa1333280:intron 30.0%
! CTTAATACTGACCAAGATTT+TGG - chr8_4:53347024-53347043 None:intergenic 30.0%
TCAATAACTGAGATGGTAAA+TGG + chr8_4:53347060-53347079 Msa1333280:intron 30.0%
CTTTCCAGTAGACATTAAAA+TGG - chr8_4:53347242-53347261 None:intergenic 30.0%
CCACTTATAAACACTTGTTT+AGG - chr8_4:53347310-53347329 None:intergenic 30.0%
CCTAAACAAGTGTTTATAAG+TGG + chr8_4:53347307-53347326 Msa1333280:intron 30.0%
TGATACCATCTTAGAAATTG+TGG - chr8_4:53347384-53347403 None:intergenic 30.0%
CTGAACAAGTGTTTATAAGT+GGG + chr8_4:53347528-53347547 Msa1333280:intron 30.0%
TGAACAAGTGTTTATAAGTG+GGG + chr8_4:53347529-53347548 Msa1333280:intron 30.0%
AAGTCTTAGAAATTGTGGTT+GGG - chr8_4:53347597-53347616 None:intergenic 30.0%
TAAGTCTTAGAAATTGTGGT+TGG - chr8_4:53347598-53347617 None:intergenic 30.0%
! TGTTTTACCAGTAGATACAA+AGG + chr8_4:53347757-53347776 Msa1333280:intron 30.0%
TGCCATATGGTTATACAATT+TGG + chr8_4:53347815-53347834 Msa1333280:intron 30.0%
GCCATATGGTTATACAATTT+GGG + chr8_4:53347816-53347835 Msa1333280:intron 30.0%
ACCCAAATTGTATAACCATA+TGG - chr8_4:53347820-53347839 None:intergenic 30.0%
AGTACACATAGCTGAAAAAT+TGG - chr8_4:53347901-53347920 None:intergenic 30.0%
AGAGGCTCTATTAAGATTTA+AGG - chr8_4:53348018-53348037 None:intergenic 30.0%
TTTAGAGAGAACTATTAGGA+AGG + chr8_4:53348123-53348142 Msa1333280:intron 30.0%
! TTAGAGAAAGACATGGTTTT+TGG + chr8_4:53348163-53348182 Msa1333280:intron 30.0%
CTTTACCAGATATTTGAAGA+TGG + chr8_4:53348574-53348593 Msa1333280:intron 30.0%
TTATGCCATCTTCAAATATC+TGG - chr8_4:53348582-53348601 None:intergenic 30.0%
ACTAGTGAAACTTTCTCAAA+CGG - chr8_4:53348733-53348752 None:intergenic 30.0%
TAGGGTTTGATTGTTGTAAG+CGG - chr8_4:53341066-53341085 None:intergenic 35.0%
TATTTGGGCGAATATGTACA+TGG + chr8_4:53341370-53341389 Msa1333280:CDS 35.0%
! TGAAATTTTGCATTCTGAGC+AGG + chr8_4:53341487-53341506 Msa1333280:intron 35.0%
! GAAATTTTGCATTCTGAGCA+GGG + chr8_4:53341488-53341507 Msa1333280:intron 35.0%
! AAATTTTGCATTCTGAGCAG+GGG + chr8_4:53341489-53341508 Msa1333280:intron 35.0%
TCTATTTACAACAACACCTC+AGG - chr8_4:53341950-53341969 None:intergenic 35.0%
AGAGTAATCTATGCTCCATT+TGG + chr8_4:53341974-53341993 Msa1333280:intron 35.0%
TAATCTATGCTCCATTTGGT+TGG + chr8_4:53341978-53341997 Msa1333280:intron 35.0%
AGAGTTAAGTTCCAACCAAA+TGG - chr8_4:53341992-53342011 None:intergenic 35.0%
ATGTGATTTACGAACTATGG+AGG + chr8_4:53342310-53342329 Msa1333280:intron 35.0%
TGCTGGCGCAATATTTAATA+TGG - chr8_4:53342413-53342432 None:intergenic 35.0%
! CTATTGAGGCATTTGTTCAT+TGG + chr8_4:53342537-53342556 Msa1333280:intron 35.0%
AAATGCTACCTTCAATGTGA+TGG - chr8_4:53342681-53342700 None:intergenic 35.0%
ACATACAATGTGAAATCACG+AGG - chr8_4:53342971-53342990 None:intergenic 35.0%
ATAGGTTCCTTGGAAAAGTT+TGG + chr8_4:53343025-53343044 Msa1333280:intron 35.0%
TAGGTTCCTTGGAAAAGTTT+GGG + chr8_4:53343026-53343045 Msa1333280:intron 35.0%
ACTTCTGTACCTTTATAGTC+CGG - chr8_4:53343115-53343134 None:intergenic 35.0%
!!! GCTTATTTTATTACAGGAGG+AGG + chr8_4:53343185-53343204 Msa1333280:intron 35.0%
!! GTTATCTTGTTGTTTGTGCT+TGG + chr8_4:53343374-53343393 Msa1333280:intron 35.0%
TCACTACGTTTACTATCTTG+TGG - chr8_4:53343482-53343501 None:intergenic 35.0%
AAAATGTTCCGATTGTTGAG+TGG + chr8_4:53343513-53343532 Msa1333280:intron 35.0%
TTATGTGACCACTCAACAAT+CGG - chr8_4:53343524-53343543 None:intergenic 35.0%
!! CCTCTGTTTTTCTATCAGTT+GGG - chr8_4:53343701-53343720 None:intergenic 35.0%
CCAACTGATAGAAAAACAGA+GGG + chr8_4:53343699-53343718 Msa1333280:intron 35.0%
AGAGGGAGACAACAAATTAT+AGG + chr8_4:53343716-53343735 Msa1333280:intron 35.0%
CTTTGGACTCAATACATGAT+AGG + chr8_4:53343777-53343796 Msa1333280:intron 35.0%
! ACTAGGTGAATCAGCTTTTA+TGG - chr8_4:53343819-53343838 None:intergenic 35.0%
! ATAAAAGCTGATTCACCTAG+TGG + chr8_4:53343818-53343837 Msa1333280:intron 35.0%
! TAAAAGCTGATTCACCTAGT+GGG + chr8_4:53343819-53343838 Msa1333280:intron 35.0%
GAACTAGTTCAAATACCCTT+GGG + chr8_4:53344040-53344059 Msa1333280:intron 35.0%
! TTAGTTGCCTTCCTTTGAAA+AGG + chr8_4:53345015-53345034 Msa1333280:intron 35.0%
! TAGTTGCCTTCCTTTGAAAA+GGG + chr8_4:53345016-53345035 Msa1333280:intron 35.0%
!! CAAATGCTAGTTTGCTTACA+AGG - chr8_4:53345112-53345131 None:intergenic 35.0%
CTTGTAAGCAAACTAGCATT+TGG + chr8_4:53345110-53345129 Msa1333280:intron 35.0%
TGGTTTCATGTAAAATCAGG+CGG + chr8_4:53345130-53345149 Msa1333280:intron 35.0%
!! ATTCATTTCCCCCTGTTTTT+GGG + chr8_4:53345167-53345186 Msa1333280:intron 35.0%
TTAACAAAGGCCCAAAAACA+GGG - chr8_4:53345180-53345199 None:intergenic 35.0%
TTTAACAAAGGCCCAAAAAC+AGG - chr8_4:53345181-53345200 None:intergenic 35.0%
AGGTAGACGAAGTTTAACAA+AGG - chr8_4:53345193-53345212 None:intergenic 35.0%
!!! TCCTTTTTTTTTCTTTCCCG+TGG + chr8_4:53345257-53345276 Msa1333280:intron 35.0%
ACCACGGGAAAGAAAAAAAA+AGG - chr8_4:53345261-53345280 None:intergenic 35.0%
AAGTCATACATTTCCCAACT+TGG - chr8_4:53345328-53345347 None:intergenic 35.0%
CTAGCTGCTTAAAATTCACT+TGG + chr8_4:53345357-53345376 Msa1333280:intron 35.0%
CTACTCTCATTGTTACTCTA+AGG - chr8_4:53345513-53345532 None:intergenic 35.0%
AGCAATAAAAAGCAAGTGTG+TGG - chr8_4:53345633-53345652 None:intergenic 35.0%
GACACATAATATAAGACGGA+GGG - chr8_4:53345665-53345684 None:intergenic 35.0%
AGACACATAATATAAGACGG+AGG - chr8_4:53345666-53345685 None:intergenic 35.0%
!! TAACAGTTGATGGACTAGTT+AGG - chr8_4:53345791-53345810 None:intergenic 35.0%
ACTGGTTATTGTACCTTTCT+TGG - chr8_4:53345939-53345958 None:intergenic 35.0%
! AAGAAAGGTACAATAACCAG+TGG + chr8_4:53345938-53345957 Msa1333280:intron 35.0%
ATCAAAAACTATCTTACCCG+AGG + chr8_4:53346243-53346262 Msa1333280:intron 35.0%
ATTATCTTACAGCCATCTTC+TGG + chr8_4:53346407-53346426 Msa1333280:intron 35.0%
TCAGATATGAAGATTCTGTC+AGG + chr8_4:53346500-53346519 Msa1333280:CDS 35.0%
TCCTACTTTGTAGATCAATG+AGG + chr8_4:53346583-53346602 Msa1333280:intron 35.0%
ACCTCATTGATCTACAAAGT+AGG - chr8_4:53346587-53346606 None:intergenic 35.0%
AAAGTCACACCTGAAGAAAA+TGG - chr8_4:53346671-53346690 None:intergenic 35.0%
! ATTTTCTTCAGGTGTGACTT+TGG + chr8_4:53346670-53346689 Msa1333280:CDS 35.0%
! TTTTGATACTAGTGGTGCTT+TGG + chr8_4:53346735-53346754 Msa1333280:intron 35.0%
! CGGTATTGTTACTTCTGTAT+TGG + chr8_4:53346896-53346915 Msa1333280:intron 35.0%
! TATTGGGTTGTTGTAGAGTT+GGG + chr8_4:53346913-53346932 Msa1333280:intron 35.0%
TCTCGATCTCTAGATTACAT+AGG - chr8_4:53347137-53347156 None:intergenic 35.0%
TAATGGGGGCAATTCAAATT+TGG - chr8_4:53347184-53347203 None:intergenic 35.0%
AAAAGGGAAGAGAGAGTAAT+GGG - chr8_4:53347200-53347219 None:intergenic 35.0%
AAAAAGGGAAGAGAGAGTAA+TGG - chr8_4:53347201-53347220 None:intergenic 35.0%
CCATCTTAGAAATTGTGGTT+GGG - chr8_4:53347379-53347398 None:intergenic 35.0%
ACCATCTTAGAAATTGTGGT+TGG - chr8_4:53347380-53347399 None:intergenic 35.0%
GTGTGTTAAAGAGTCCAAAT+TGG + chr8_4:53347493-53347512 Msa1333280:intron 35.0%
CCACTTATAAACACTTGTTC+AGG - chr8_4:53347530-53347549 None:intergenic 35.0%
CCTGAACAAGTGTTTATAAG+TGG + chr8_4:53347527-53347546 Msa1333280:intron 35.0%
TGACAGTTGATTGTAACAGA+GGG - chr8_4:53347648-53347667 None:intergenic 35.0%
TTGACAGTTGATTGTAACAG+AGG - chr8_4:53347649-53347668 None:intergenic 35.0%
TGTTACAATCAACTGTCAAG+TGG + chr8_4:53347650-53347669 Msa1333280:intron 35.0%
CTATTATTAATAAGGCCCTG+TGG + chr8_4:53347680-53347699 Msa1333280:intron 35.0%
ATCATAATATCAGAGCCACA+GGG - chr8_4:53347698-53347717 None:intergenic 35.0%
TATCATAATATCAGAGCCAC+AGG - chr8_4:53347699-53347718 None:intergenic 35.0%
GCTCTGATATTATGATACCA+GGG + chr8_4:53347702-53347721 Msa1333280:intron 35.0%
ATATCTATACCACCATTCAG+TGG - chr8_4:53347948-53347967 None:intergenic 35.0%
ATTGTTCAGATCACTAGAGT+AGG + chr8_4:53348082-53348101 Msa1333280:intron 35.0%
TTGTTCAGATCACTAGAGTA+GGG + chr8_4:53348083-53348102 Msa1333280:intron 35.0%
AAACGAGTTAGAGAAAGACA+TGG + chr8_4:53348156-53348175 Msa1333280:intron 35.0%
!!! TGGTTTTTGGTAGAACACTA+TGG + chr8_4:53348176-53348195 Msa1333280:intron 35.0%
!! AGTGGGCTTTTACATTGTTT+AGG + chr8_4:53348275-53348294 Msa1333280:intron 35.0%
CTCTTTATCATGATTCTGAC+CGG + chr8_4:53348371-53348390 Msa1333280:CDS 35.0%
TATGACAAACGCATGAAATG+AGG - chr8_4:53348548-53348567 None:intergenic 35.0%
TAGGATAAACCAAGTATGTC+CGG - chr8_4:53348651-53348670 None:intergenic 35.0%
! TATTGTAGGACTGCATTGAT+AGG - chr8_4:53348670-53348689 None:intergenic 35.0%
TTCCAAGACGATGATATTGT+AGG - chr8_4:53348684-53348703 None:intergenic 35.0%
! AGAGTAAAGGTATAGAATCC+TGG + chr8_4:53348860-53348879 Msa1333280:intron 35.0%
TCATGATTGGATAAAGCTCT+TGG + chr8_4:53349140-53349159 Msa1333280:CDS 35.0%
! TTTTTATATAGGTCCCTCCG+CGG - chr8_4:53340932-53340951 None:intergenic 40.0%
ATATGTACATGGACTCTCTG+CGG + chr8_4:53341381-53341400 Msa1333280:CDS 40.0%
!! AGGCGTTGAGAATAAGTGTT+TGG + chr8_4:53341404-53341423 Msa1333280:CDS 40.0%
!! GCGAATGGCTTTGTATGAAT+GGG + chr8_4:53341511-53341530 Msa1333280:intron 40.0%
!! CGAATGGCTTTGTATGAATG+GGG + chr8_4:53341512-53341531 Msa1333280:intron 40.0%
TTGTATGAATGGGGTAGCAT+TGG + chr8_4:53341521-53341540 Msa1333280:intron 40.0%
AGTAACACACTGACATGTGT+CGG + chr8_4:53342119-53342138 Msa1333280:intron 40.0%
!! AAACTCTAAAGCGACACTTC+TGG - chr8_4:53342164-53342183 None:intergenic 40.0%
TGGAGGTTAATCACATGCTA+TGG + chr8_4:53342327-53342346 Msa1333280:intron 40.0%
TGCAGAGTTGAGACTTTAGA+TGG - chr8_4:53342567-53342586 None:intergenic 40.0%
! ATCTAAAGTCTCAACTCTGC+AGG + chr8_4:53342566-53342585 Msa1333280:intron 40.0%
CTTCCTGTTACTGTCAAATC+TGG + chr8_4:53342644-53342663 Msa1333280:CDS 40.0%
AAGCCAGATTTGACAGTAAC+AGG - chr8_4:53342650-53342669 None:intergenic 40.0%
!! ACTGTCAAATCTGGCTTTGT+TGG + chr8_4:53342653-53342672 Msa1333280:CDS 40.0%
TGTTGGTACCATCACATTGA+AGG + chr8_4:53342670-53342689 Msa1333280:CDS 40.0%
GGCATACAAGTTTGCATGTT+TGG + chr8_4:53342855-53342874 Msa1333280:intron 40.0%
AATTCCATGCGACGTGAAAA+GGG - chr8_4:53342945-53342964 None:intergenic 40.0%
AGGTTCCTTGGAAAAGTTTG+GGG + chr8_4:53343027-53343046 Msa1333280:intron 40.0%
! TCTTTCCCCAAACTTTTCCA+AGG - chr8_4:53343035-53343054 None:intergenic 40.0%
GAAAAGTTTGGGGAAAGAAC+CGG + chr8_4:53343037-53343056 Msa1333280:CDS 40.0%
CGATCGATTAGAACAATCAC+CGG - chr8_4:53343059-53343078 None:intergenic 40.0%
!! CAATTTGCTGAAGCTTGTCT+TGG - chr8_4:53343227-53343246 None:intergenic 40.0%
AGACAAGCTTCAGCAAATTG+AGG + chr8_4:53343227-53343246 Msa1333280:CDS 40.0%
AAGCTTCAGCAAATTGAGGT+AGG + chr8_4:53343231-53343250 Msa1333280:intron 40.0%
!! GCTGTATTGTTGTTTGTTGC+CGG + chr8_4:53343303-53343322 Msa1333280:intron 40.0%
! TCCTGCAATAGAAGTGTGTA+AGG + chr8_4:53343352-53343371 Msa1333280:intron 40.0%
ACCTTACACACTTCTATTGC+AGG - chr8_4:53343356-53343375 None:intergenic 40.0%
CCCAACTGATAGAAAAACAG+AGG + chr8_4:53343698-53343717 Msa1333280:intron 40.0%
!! CCCTCTGTTTTTCTATCAGT+TGG - chr8_4:53343702-53343721 None:intergenic 40.0%
! AAAAGCTGATTCACCTAGTG+GGG + chr8_4:53343820-53343839 Msa1333280:intron 40.0%
TAAACAAGATGTTCCCCACT+AGG - chr8_4:53343836-53343855 None:intergenic 40.0%
CAATCTAGACAGACTACTAG+AGG + chr8_4:53343971-53343990 Msa1333280:intron 40.0%
GGTTTGGACTTGTAACCTTA+AGG + chr8_4:53344018-53344037 Msa1333280:intron 40.0%
GGAACTAGTTCAAATACCCT+TGG + chr8_4:53344039-53344058 Msa1333280:intron 40.0%
TAGTTCAAATACCCTTGGGA+CGG + chr8_4:53344044-53344063 Msa1333280:intron 40.0%
! AACCTTCCCTTTTCAAAGGA+AGG - chr8_4:53345025-53345044 None:intergenic 40.0%
! TCTGAACCTTCCCTTTTCAA+AGG - chr8_4:53345029-53345048 None:intergenic 40.0%
! GATTCATTTCCCCCTGTTTT+TGG + chr8_4:53345166-53345185 Msa1333280:intron 40.0%
TAACAAAGGCCCAAAAACAG+GGG - chr8_4:53345179-53345198 None:intergenic 40.0%
TGCAATATCCAAGTCCAAGT+TGG + chr8_4:53345311-53345330 Msa1333280:CDS 40.0%
GCAATATCCAAGTCCAAGTT+GGG + chr8_4:53345312-53345331 Msa1333280:CDS 40.0%
TACATTTCCCAACTTGGACT+TGG - chr8_4:53345322-53345341 None:intergenic 40.0%
! TGTTTTCCAGGATATGCACA+AGG - chr8_4:53345591-53345610 None:intergenic 40.0%
!! TAGCATTGAAGCTGTTTTCC+AGG - chr8_4:53345603-53345622 None:intergenic 40.0%
TATAAGACGGAGGGAGTAAT+TGG - chr8_4:53345656-53345675 None:intergenic 40.0%
GGTTATTGTACCTTTCTTGG+AGG - chr8_4:53345936-53345955 None:intergenic 40.0%
! ATATTGATGCCGACTATGCA+GGG - chr8_4:53345985-53346004 None:intergenic 40.0%
! TATATTGATGCCGACTATGC+AGG - chr8_4:53345986-53346005 None:intergenic 40.0%
CACTTAATAGCGTAAGCAAG+TGG - chr8_4:53346625-53346644 None:intergenic 40.0%
!! AGTGTTGTTTGCAGTAATCC+CGG + chr8_4:53346641-53346660 Msa1333280:intron 40.0%
TCACACCTGAAGAAAATGGA+TGG - chr8_4:53346667-53346686 None:intergenic 40.0%
CTGTTCATCCATTGTAACAG+CGG - chr8_4:53346705-53346724 None:intergenic 40.0%
GCTGTTACAATGGATGAACA+GGG + chr8_4:53346704-53346723 Msa1333280:CDS 40.0%
! TGCTTTGGATAGATTGAGGA+AGG + chr8_4:53346750-53346769 Msa1333280:intron 40.0%
AAGCTTCCTGTCTTAATGCT+CGG + chr8_4:53346876-53346895 Msa1333280:intron 40.0%
ACAATACCGAGCATTAAGAC+AGG - chr8_4:53346885-53346904 None:intergenic 40.0%
! GTATTGGGTTGTTGTAGAGT+TGG + chr8_4:53346912-53346931 Msa1333280:intron 40.0%
AGAGGTGGATCAGAGTTAAT+AGG + chr8_4:53346968-53346987 Msa1333280:intron 40.0%
AAAGGGAAGAGAGAGTAATG+GGG - chr8_4:53347199-53347218 None:intergenic 40.0%
ACTGTTAAAGAGTCCCACAT+TGG + chr8_4:53347273-53347292 Msa1333280:intron 40.0%
! CCCAACCACAATTTCTAAGA+TGG + chr8_4:53347376-53347395 Msa1333280:intron 40.0%
GATTGCGAAAACCTAATAGC+AGG - chr8_4:53347434-53347453 None:intergenic 40.0%
! GCTATTAGGTTTTCGCAATC+CGG + chr8_4:53347434-53347453 Msa1333280:intron 40.0%
AGTCCAAATTGGTCGAGAAA+TGG + chr8_4:53347504-53347523 Msa1333280:intron 40.0%
!! ACCTCATAAGCCGATTTTGT+GGG + chr8_4:53347560-53347579 Msa1333280:intron 40.0%
CTAACACAACCCCACAAAAT+CGG - chr8_4:53347573-53347592 None:intergenic 40.0%
! GGCTCTGATATTATGATACC+AGG + chr8_4:53347701-53347720 Msa1333280:intron 40.0%
TTCGATAGGAAATAGAACCC+TGG - chr8_4:53347722-53347741 None:intergenic 40.0%
TAAAACAGCCAGATATTGCC+AGG - chr8_4:53347861-53347880 None:intergenic 40.0%
AATTAGAAGTGGAGGCAACA+AGG - chr8_4:53348055-53348074 None:intergenic 40.0%
TGTTCAGATCACTAGAGTAG+GGG + chr8_4:53348084-53348103 Msa1333280:intron 40.0%
! GGCAGTGCAACTCATTATTT+TGG + chr8_4:53348296-53348315 Msa1333280:intron 40.0%
TTGGGAGATTGACAAGAGAT+GGG + chr8_4:53348399-53348418 Msa1333280:CDS 40.0%
AGGATATCAGTCCACATGAA+TGG + chr8_4:53348422-53348441 Msa1333280:CDS 40.0%
CAAACCTCAATCCATTCATG+TGG - chr8_4:53348436-53348455 None:intergenic 40.0%
GTCCTACAATATCATCGTCT+TGG + chr8_4:53348679-53348698 Msa1333280:CDS 40.0%
TCTCAGGATCACTTCTTTCT+TGG - chr8_4:53348708-53348727 None:intergenic 40.0%
ACTTTCTCAAACGGAATCTC+AGG - chr8_4:53348724-53348743 None:intergenic 40.0%
GAAAGTTTCACTAGTCCTCT+CGG + chr8_4:53348738-53348757 Msa1333280:CDS 40.0%
ATTAGGACCTAAGACAAGCA+AGG - chr8_4:53348903-53348922 None:intergenic 40.0%
TACTGAGCCTGTAGTTTAGA+CGG - chr8_4:53349120-53349139 None:intergenic 40.0%
TACAGGCTCAGTATCATGAT+TGG + chr8_4:53349127-53349146 Msa1333280:intron 40.0%
TTATTTGTGGTGGCAGTATG+CGG + chr8_4:53349235-53349254 Msa1333280:CDS 40.0%
! TTTTATATAGGTCCCTCCGC+GGG - chr8_4:53340931-53340950 None:intergenic 45.0%
TAAGCGGTGATGCGTAGAAA+TGG - chr8_4:53341050-53341069 None:intergenic 45.0%
GATCAGAGGGGAAATAGGAA+AGG - chr8_4:53341111-53341130 None:intergenic 45.0%
AAGATAGAGTGCGATCAGAG+GGG - chr8_4:53341123-53341142 None:intergenic 45.0%
GAAGATAGAGTGCGATCAGA+GGG - chr8_4:53341124-53341143 None:intergenic 45.0%
AGAAGATAGAGTGCGATCAG+AGG - chr8_4:53341125-53341144 None:intergenic 45.0%
!! GGCGAATGGCTTTGTATGAA+TGG + chr8_4:53341510-53341529 Msa1333280:intron 45.0%
! AGCTAGCACGATTTTCACGA+GGG - chr8_4:53341887-53341906 None:intergenic 45.0%
! AAGCTAGCACGATTTTCACG+AGG - chr8_4:53341888-53341907 None:intergenic 45.0%
ATTCCATGCGACGTGAAAAG+GGG - chr8_4:53342944-53342963 None:intergenic 45.0%
GAATTCCATGCGACGTGAAA+AGG - chr8_4:53342946-53342965 None:intergenic 45.0%
TCCTGATAGCCGGACTATAA+AGG + chr8_4:53343103-53343122 Msa1333280:CDS 45.0%
ACCTTTATAGTCCGGCTATC+AGG - chr8_4:53343107-53343126 None:intergenic 45.0%
CCAGTCACATGCAACATTGA+AGG - chr8_4:53343441-53343460 None:intergenic 45.0%
CCTTCAATGTTGCATGTGAC+TGG + chr8_4:53343438-53343457 Msa1333280:intron 45.0%
GTTGCATGTGACTGGATGTT+AGG + chr8_4:53343446-53343465 Msa1333280:intron 45.0%
TTGAGTGGTCACATAAGACC+TGG + chr8_4:53343528-53343547 Msa1333280:intron 45.0%
AGATTGTAGAGGCTTGCCTT+AGG + chr8_4:53343607-53343626 Msa1333280:intron 45.0%
ACATGTGTGGAAAAGACCCA+TGG + chr8_4:53343638-53343657 Msa1333280:intron 45.0%
ACCATTTACAACCGTCCCAA+GGG - chr8_4:53344058-53344077 None:intergenic 45.0%
! TGCCTTCCTTTGAAAAGGGA+AGG + chr8_4:53345020-53345039 Msa1333280:intron 45.0%
GAAAAGGGAAGGTTCAGAGA+AGG + chr8_4:53345031-53345050 Msa1333280:intron 45.0%
AACAAAGGCCCAAAAACAGG+GGG - chr8_4:53345178-53345197 None:intergenic 45.0%
CAAATGCCTTGTGCATATCC+TGG + chr8_4:53345582-53345601 Msa1333280:intron 45.0%
! TGTAAGTTTGCTCACTGCCT+AGG - chr8_4:53346097-53346116 None:intergenic 45.0%
ACGCAAACAGAGAGAAAGAG+GGG - chr8_4:53346330-53346349 None:intergenic 45.0%
CACGCAAACAGAGAGAAAGA+GGG - chr8_4:53346331-53346350 None:intergenic 45.0%
ACACGCAAACAGAGAGAAAG+AGG - chr8_4:53346332-53346351 None:intergenic 45.0%
!! CAGCCATCTTCTGGAATTCA+TGG + chr8_4:53346416-53346435 Msa1333280:intron 45.0%
CAGCCATGAATTCCAGAAGA+TGG - chr8_4:53346422-53346441 None:intergenic 45.0%
ACCTGAAGAAAATGGATGGC+CGG - chr8_4:53346663-53346682 None:intergenic 45.0%
TAAGCTTGCCGCTGTTACAA+TGG + chr8_4:53346694-53346713 Msa1333280:CDS 45.0%
CGCTGTTACAATGGATGAAC+AGG + chr8_4:53346703-53346722 Msa1333280:CDS 45.0%
! GTGGTGCTTTGGATAGATTG+AGG + chr8_4:53346746-53346765 Msa1333280:intron 45.0%
! ACAGGTTGACCTTCGATAGA+AGG - chr8_4:53346807-53346826 None:intergenic 45.0%
AAGGGAAGAGAGAGTAATGG+GGG - chr8_4:53347198-53347217 None:intergenic 45.0%
! GTCCCACATTGGTTGAAAGA+TGG + chr8_4:53347284-53347303 Msa1333280:intron 45.0%
GGCCATCTTTCAACCAATGT+GGG - chr8_4:53347289-53347308 None:intergenic 45.0%
AGGCCATCTTTCAACCAATG+TGG - chr8_4:53347290-53347309 None:intergenic 45.0%
TGCGAAAACCTAATAGCAGG+TGG - chr8_4:53347431-53347450 None:intergenic 45.0%
AGGCCATTTCTCGACCAATT+TGG - chr8_4:53347510-53347529 None:intergenic 45.0%
! CAAAATCGGCTTATGAGGTG+AGG - chr8_4:53347559-53347578 None:intergenic 45.0%
!! CACCTCATAAGCCGATTTTG+TGG + chr8_4:53347559-53347578 Msa1333280:intron 45.0%
!! CCTCATAAGCCGATTTTGTG+GGG + chr8_4:53347561-53347580 Msa1333280:intron 45.0%
! CGATTTTGTGGGGTTGTGTT+AGG + chr8_4:53347571-53347590 Msa1333280:intron 45.0%
TGATTGTAACAGAGGGAGCA+GGG - chr8_4:53347641-53347660 None:intergenic 45.0%
TTGATTGTAACAGAGGGAGC+AGG - chr8_4:53347642-53347661 None:intergenic 45.0%
CCATCTGCCTTTGTATCTAC+TGG - chr8_4:53347767-53347786 None:intergenic 45.0%
CCAGTAGATACAAAGGCAGA+TGG + chr8_4:53347764-53347783 Msa1333280:intron 45.0%
TGACATGATGCACCACTGAA+TGG + chr8_4:53347933-53347952 Msa1333280:intron 45.0%
GTGGTTAAGCTGTCAAGGAA+AGG - chr8_4:53347979-53347998 None:intergenic 45.0%
TCCTTGACAGCTTAACCACT+TGG + chr8_4:53347980-53347999 Msa1333280:intron 45.0%
CCTTGACAGCTTAACCACTT+GGG + chr8_4:53347981-53348000 Msa1333280:intron 45.0%
CTTAACCACTTGGGATGACT+TGG + chr8_4:53347990-53348009 Msa1333280:intron 45.0%
ATGGCGTCGTTTGATTCATG+TGG + chr8_4:53348195-53348214 Msa1333280:intron 45.0%
TGTTCAGCTCACGATCAAAG+TGG + chr8_4:53348257-53348276 Msa1333280:intron 45.0%
GTTCAGCTCACGATCAAAGT+GGG + chr8_4:53348258-53348277 Msa1333280:intron 45.0%
AGTCATGCACCTTGATTGAG+AGG + chr8_4:53348344-53348363 Msa1333280:intron 45.0%
! AAGAGCTAGCCTCTCAATCA+AGG - chr8_4:53348356-53348375 None:intergenic 45.0%
CATCTCTTGTCAATCTCCCA+AGG - chr8_4:53348400-53348419 None:intergenic 45.0%
CTTGGGAGATTGACAAGAGA+TGG + chr8_4:53348398-53348417 Msa1333280:CDS 45.0%
!! CAGTCCACATGAATGGATTG+AGG + chr8_4:53348429-53348448 Msa1333280:CDS 45.0%
!! TGACACCGACTTATGGTGAT+CGG - chr8_4:53348614-53348633 None:intergenic 45.0%
!! ACCATAAGTCGGTGTCAAAG+TGG + chr8_4:53348617-53348636 Msa1333280:CDS 45.0%
!! CCATAAGTCGGTGTCAAAGT+GGG + chr8_4:53348618-53348637 Msa1333280:CDS 45.0%
!! TGTCAAAGTGGGCTATGAAC+CGG + chr8_4:53348629-53348648 Msa1333280:CDS 45.0%
TGTCTCTCTTACTCTTACCG+AGG + chr8_4:53348762-53348781 Msa1333280:CDS 45.0%
ATGTTGGAGACCACAATCAG+GGG - chr8_4:53348829-53348848 None:intergenic 45.0%
CATGTTGGAGACCACAATCA+GGG - chr8_4:53348830-53348849 None:intergenic 45.0%
TCATGTTGGAGACCACAATC+AGG - chr8_4:53348831-53348850 None:intergenic 45.0%
ACTGAGCCTGTAGTTTAGAC+GGG - chr8_4:53349119-53349138 None:intergenic 45.0%
CAAATAAGGAGCCCTTGAGA+TGG - chr8_4:53349222-53349241 None:intergenic 45.0%
! TCTCAAGGGCTCCTTATTTG+TGG + chr8_4:53349222-53349241 Msa1333280:CDS 45.0%
GCATACTGCCACCACAAATA+AGG - chr8_4:53349236-53349255 None:intergenic 45.0%
AGTGCGATCAGAGGGGAAAT+AGG - chr8_4:53341116-53341135 None:intergenic 50.0%
! CTAGCACGATTTTCACGAGG+GGG - chr8_4:53341885-53341904 None:intergenic 50.0%
! GCTAGCACGATTTTCACGAG+GGG - chr8_4:53341886-53341905 None:intergenic 50.0%
GCACAGACACACACGAACAT+TGG + chr8_4:53342031-53342050 Msa1333280:intron 50.0%
! CTTCTGGTCGAAGGTGTGTT+TGG - chr8_4:53342148-53342167 None:intergenic 50.0%
AAAGCGACACTTCTGGTCGA+AGG - chr8_4:53342157-53342176 None:intergenic 50.0%
! TTTCCCCTTTTCACGTCGCA+TGG + chr8_4:53342938-53342957 Msa1333280:intron 50.0%
TATAGTCCGGCTATCAGGAG+CGG - chr8_4:53343102-53343121 None:intergenic 50.0%
GCATGTGACTGGATGTTAGG+CGG + chr8_4:53343449-53343468 Msa1333280:intron 50.0%
GTGGTCACATAAGACCTGGT+AGG + chr8_4:53343532-53343551 Msa1333280:intron 50.0%
CTCCTTGCAAGTGCTTCCAT+GGG - chr8_4:53343657-53343676 None:intergenic 50.0%
!! CATGGAAGCACTTGCAAGGA+GGG + chr8_4:53343656-53343675 Msa1333280:intron 50.0%
AAGCACTTGCAAGGAGGGTT+GGG + chr8_4:53343661-53343680 Msa1333280:intron 50.0%
AGGAGGGTTGGGTAGATTGA+AGG + chr8_4:53343672-53343691 Msa1333280:intron 50.0%
!! AGACTACTAGAGGCGTCAAG+AGG + chr8_4:53343981-53344000 Msa1333280:intron 50.0%
ACCCTTGGGACGGTTGTAAA+TGG + chr8_4:53344054-53344073 Msa1333280:intron 50.0%
GACCATTTACAACCGTCCCA+AGG - chr8_4:53344059-53344078 None:intergenic 50.0%
TTTCTTTCCCGTGGTCATGC+AGG + chr8_4:53345266-53345285 Msa1333280:intron 50.0%
AGTAGCTGACCCTGCATAGT+CGG + chr8_4:53345973-53345992 Msa1333280:intron 50.0%
TTAAGGTGCAGCAGTAGACG+AGG - chr8_4:53346184-53346203 None:intergenic 50.0%
CAAACAGAGAGAAAGAGGGG+GGG - chr8_4:53346327-53346346 None:intergenic 50.0%
GCAAACAGAGAGAAAGAGGG+GGG - chr8_4:53346328-53346347 None:intergenic 50.0%
CGCAAACAGAGAGAAAGAGG+GGG - chr8_4:53346329-53346348 None:intergenic 50.0%
CCTGAAGAAAATGGATGGCC+GGG - chr8_4:53346662-53346681 None:intergenic 50.0%
! AAACTGGCTTATGGGCTTGG+TGG - chr8_4:53347340-53347359 None:intergenic 50.0%
AAGCCCATAAGCCAGTTTCG+CGG + chr8_4:53347342-53347361 Msa1333280:intron 50.0%
! AACCCGCGAAACTGGCTTAT+GGG - chr8_4:53347348-53347367 None:intergenic 50.0%
CCTAATACAACCCGCGAAAC+TGG - chr8_4:53347356-53347375 None:intergenic 50.0%
! CCAGTTTCGCGGGTTGTATT+AGG + chr8_4:53347353-53347372 Msa1333280:intron 50.0%
! CCCCACAAAATCGGCTTATG+AGG - chr8_4:53347564-53347583 None:intergenic 50.0%
AGCAGGGACAAAAAGGGGAA+AGG - chr8_4:53347625-53347644 None:intergenic 50.0%
AGAGGGAGCAGGGACAAAAA+GGG - chr8_4:53347631-53347650 None:intergenic 50.0%
! CAGAGATGTAGCTTTGCTCC+TGG + chr8_4:53347840-53347859 Msa1333280:intron 50.0%
GCTTTGCTCCTGGCAATATC+TGG + chr8_4:53347850-53347869 Msa1333280:intron 50.0%
AGTGGTGCATCATGTCACGT+GGG - chr8_4:53347930-53347949 None:intergenic 50.0%
CATGATGCACCACTGAATGG+TGG + chr8_4:53347936-53347955 Msa1333280:intron 50.0%
CCCAAGTGGTTAAGCTGTCA+AGG - chr8_4:53347984-53348003 None:intergenic 50.0%
AGGAACCAAGTCATCCCAAG+TGG - chr8_4:53347998-53348017 None:intergenic 50.0%
CAGATCACTAGAGTAGGGGT+AGG + chr8_4:53348088-53348107 Msa1333280:intron 50.0%
! AAGCCTTATCCCGCTAAGTG+CGG - chr8_4:53348225-53348244 None:intergenic 50.0%
! ATGATTCTGACCGGCTTCCT+TGG + chr8_4:53348380-53348399 Msa1333280:CDS 50.0%
! TGATTCTGACCGGCTTCCTT+GGG + chr8_4:53348381-53348400 Msa1333280:CDS 50.0%
TGTCAATCTCCCAAGGAAGC+CGG - chr8_4:53348393-53348412 None:intergenic 50.0%
GGAGATTGACAAGAGATGGG+AGG + chr8_4:53348402-53348421 Msa1333280:CDS 50.0%
GCCTACCGATCACCATAAGT+CGG + chr8_4:53348606-53348625 Msa1333280:CDS 50.0%
! ACCGACTTATGGTGATCGGT+AGG - chr8_4:53348610-53348629 None:intergenic 50.0%
!! CCCACTTTGACACCGACTTA+TGG - chr8_4:53348621-53348640 None:intergenic 50.0%
GGCTATGAACCGGACATACT+TGG + chr8_4:53348639-53348658 Msa1333280:CDS 50.0%
GAGTAAGAGAGACATCCGAG+AGG - chr8_4:53348756-53348775 None:intergenic 50.0%
! TCTAGAGTTGCCCCTGATTG+TGG + chr8_4:53348816-53348835 Msa1333280:intron 50.0%
AGGACCTAAGACAAGCAAGG+CGG - chr8_4:53348900-53348919 None:intergenic 50.0%
CGTGTTCCCGTCTAAACTAC+AGG + chr8_4:53349110-53349129 Msa1333280:intron 50.0%
GGCCTTCAGTTCCATCTCAA+GGG + chr8_4:53349208-53349227 Msa1333280:CDS 50.0%
AGCCCTTGAGATGGAACTGA+AGG - chr8_4:53349213-53349232 None:intergenic 50.0%
! CAAGGGCTCCTTATTTGTGG+TGG + chr8_4:53349225-53349244 Msa1333280:CDS 50.0%
TGTACATGGACTCTCTGCGG+AGG + chr8_4:53341384-53341403 Msa1333280:CDS 55.0%
!! TAGCTTCGCCGCTGATTCTG+AGG + chr8_4:53341902-53341921 Msa1333280:intron 55.0%
CTAATCCCGCTCCTGATAGC+CGG + chr8_4:53343093-53343112 Msa1333280:CDS 55.0%
ATAGTCCGGCTATCAGGAGC+GGG - chr8_4:53343101-53343120 None:intergenic 55.0%
!! GACCCATGGAAGCACTTGCA+AGG + chr8_4:53343652-53343671 Msa1333280:intron 55.0%
CCTCCTTGCAAGTGCTTCCA+TGG - chr8_4:53343658-53343677 None:intergenic 55.0%
!! CCATGGAAGCACTTGCAAGG+AGG + chr8_4:53343655-53343674 Msa1333280:intron 55.0%
! GAAGCACTTGCAAGGAGGGT+TGG + chr8_4:53343660-53343679 Msa1333280:intron 55.0%
!! TCAAGAGGTGCTCAGCGGTA+AGG + chr8_4:53343996-53344015 Msa1333280:intron 55.0%
!! CAAGAGGTGCTCAGCGGTAA+GGG + chr8_4:53343997-53344016 Msa1333280:intron 55.0%
TCTGCTTCCTGCATGACCAC+GGG - chr8_4:53345276-53345295 None:intergenic 55.0%
CTCTGCTTCCTGCATGACCA+CGG - chr8_4:53345277-53345296 None:intergenic 55.0%
TACTGGCAGCATGCTACCAC+TGG - chr8_4:53345957-53345976 None:intergenic 55.0%
GACTATGCAGGGTCAGCTAC+TGG - chr8_4:53345974-53345993 None:intergenic 55.0%
GTGCAGCAGTAGACGAGGAA+AGG - chr8_4:53346179-53346198 None:intergenic 55.0%
! CCCGGCCATCCATTTTCTTC+AGG + chr8_4:53346659-53346678 Msa1333280:CDS 55.0%
! GCGAAACTGGCTTATGGGCT+TGG - chr8_4:53347343-53347362 None:intergenic 55.0%
AGCCCATAAGCCAGTTTCGC+GGG + chr8_4:53347343-53347362 Msa1333280:intron 55.0%
! CAACCCGCGAAACTGGCTTA+TGG - chr8_4:53347349-53347368 None:intergenic 55.0%
CCTAATAGCAGGTGGCGCAA+CGG - chr8_4:53347423-53347442 None:intergenic 55.0%
!! CCAGCACTATTCGGCTTGGT+GGG - chr8_4:53347463-53347482 None:intergenic 55.0%
CCACCAAGCCGAATAGTGCT+GGG + chr8_4:53347461-53347480 Msa1333280:intron 55.0%
GAGGGAGCAGGGACAAAAAG+GGG - chr8_4:53347630-53347649 None:intergenic 55.0%
CAGAGGGAGCAGGGACAAAA+AGG - chr8_4:53347632-53347651 None:intergenic 55.0%
GTGGTGCATCATGTCACGTG+GGG - chr8_4:53347929-53347948 None:intergenic 55.0%
CAGTGGTGCATCATGTCACG+TGG - chr8_4:53347931-53347950 None:intergenic 55.0%
CTTATCCCGCTAAGTGCGGT+CGG - chr8_4:53348221-53348240 None:intergenic 55.0%
GCACTTAGCGGGATAAGGCT+TGG + chr8_4:53348224-53348243 Msa1333280:intron 55.0%
! GCGGACACATTGAAGCATCC+AGG - chr8_4:53348881-53348900 None:intergenic 55.0%
GTGTCCGCCTTGCTTGTCTT+AGG + chr8_4:53348893-53348912 Msa1333280:intron 55.0%
CGGCCTTCAGTTCCATCTCA+AGG + chr8_4:53349207-53349226 Msa1333280:CDS 55.0%
GCATTCTGAGCAGGGGCGAA+TGG + chr8_4:53341496-53341515 Msa1333280:intron 60.0%
!! AGGCGTCAAGAGGTGCTCAG+CGG + chr8_4:53343991-53344010 Msa1333280:intron 60.0%
GGTGCTCAGCGGTAAGGGTT+TGG + chr8_4:53344002-53344021 Msa1333280:intron 60.0%
GGCGCAACGGATATTGGAGG+AGG - chr8_4:53347410-53347429 None:intergenic 60.0%
GGTGGCGCAACGGATATTGG+AGG - chr8_4:53347413-53347432 None:intergenic 60.0%
GCAGGTGGCGCAACGGATAT+TGG - chr8_4:53347416-53347435 None:intergenic 60.0%
CCGTTGCGCCACCTGCTATT+AGG + chr8_4:53347420-53347439 Msa1333280:intron 60.0%
!! TATTCGGCTTGGTGGGAGGC+CGG - chr8_4:53347456-53347475 None:intergenic 60.0%
!! GCACTATTCGGCTTGGTGGG+AGG - chr8_4:53347460-53347479 None:intergenic 60.0%
CCCACCAAGCCGAATAGTGC+TGG + chr8_4:53347460-53347479 Msa1333280:intron 60.0%
!! CCCAGCACTATTCGGCTTGG+TGG - chr8_4:53347464-53347483 None:intergenic 60.0%
ACGCCCAGCACTATTCGGCT+TGG - chr8_4:53347467-53347486 None:intergenic 60.0%
CCCTCACGCCCAGCACTATT+CGG - chr8_4:53347472-53347491 None:intergenic 60.0%
! CCGAATAGTGCTGGGCGTGA+GGG + chr8_4:53347469-53347488 Msa1333280:intron 60.0%
! CGAATAGTGCTGGGCGTGAG+GGG + chr8_4:53347470-53347489 Msa1333280:intron 60.0%
! GAATAGTGCTGGGCGTGAGG+GGG + chr8_4:53347471-53347490 Msa1333280:intron 60.0%
ATGTGGCCGACCGCACTTAG+CGG + chr8_4:53348212-53348231 Msa1333280:intron 60.0%
CGACCGCACTTAGCGGGATA+AGG + chr8_4:53348219-53348238 Msa1333280:intron 60.0%
GTGGTGGCAGTATGCGGTAC+AGG + chr8_4:53349241-53349260 Msa1333280:CDS 60.0%
! GCCGAATAGTGCTGGGCGTG+AGG + chr8_4:53347468-53347487 Msa1333280:intron 65.0%
TGTGGCCGACCGCACTTAGC+GGG + chr8_4:53348213-53348232 Msa1333280:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53340924 53349281 53340924 ID=Msa1333280;Name=Msa1333280
chr8_4 mRNA 53340924 53349281 53340924 ID=Msa1333280-mRNA-1;Parent=Msa1333280;Name=Msa1333280-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.8|0.63|1|0.9|0.90|11|0|407
chr8_4 exon 53340924 53341172 53340924 ID=Msa1333280-mRNA-1:exon:16320;Parent=Msa1333280-mRNA-1
chr8_4 exon 53341349 53341430 53341349 ID=Msa1333280-mRNA-1:exon:16321;Parent=Msa1333280-mRNA-1
chr8_4 exon 53342588 53342691 53342588 ID=Msa1333280-mRNA-1:exon:16322;Parent=Msa1333280-mRNA-1
chr8_4 exon 53343029 53343124 53343029 ID=Msa1333280-mRNA-1:exon:16323;Parent=Msa1333280-mRNA-1
chr8_4 exon 53343201 53343248 53343201 ID=Msa1333280-mRNA-1:exon:16324;Parent=Msa1333280-mRNA-1
chr8_4 exon 53345288 53345338 53345288 ID=Msa1333280-mRNA-1:exon:16325;Parent=Msa1333280-mRNA-1
chr8_4 exon 53346478 53346521 53346478 ID=Msa1333280-mRNA-1:exon:16326;Parent=Msa1333280-mRNA-1
chr8_4 exon 53346655 53346748 53346655 ID=Msa1333280-mRNA-1:exon:16327;Parent=Msa1333280-mRNA-1
chr8_4 exon 53348346 53348450 53348346 ID=Msa1333280-mRNA-1:exon:16328;Parent=Msa1333280-mRNA-1
chr8_4 exon 53348583 53348783 53348583 ID=Msa1333280-mRNA-1:exon:16329;Parent=Msa1333280-mRNA-1
chr8_4 exon 53349132 53349281 53349132 ID=Msa1333280-mRNA-1:exon:16330;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53340924 53341172 53340924 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53341349 53341430 53341349 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53342588 53342691 53342588 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53343029 53343124 53343029 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53343201 53343248 53343201 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53345288 53345338 53345288 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53346478 53346521 53346478 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53346655 53346748 53346655 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53348346 53348450 53348346 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53348583 53348783 53348583 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
chr8_4 CDS 53349132 53349281 53349132 ID=Msa1333280-mRNA-1:cds;Parent=Msa1333280-mRNA-1
Gene Sequence

>Msa1333280

TTAACCCGCGGAGGGACCTATATAAAAACCAATTCTTCTAATTTCCTTCATTTTCATTTTCATTTCATTTCTTTTCAATCGATTCTGTTACGTACACTCTTTATCTTATCATTCTCATTCACGCCATTTCTACGCATCACCGCTTACAACAATCAAACCCTAATTCTCTCATTTCTTCATGGATCCTTTCCTATTTCCCCTCTGATCGCACTCTATCTTCTCCGATTATTCATCATGTTCGAAGCTCACGTACTGCATTTGCTTCGAAAATATTTGGGCGAATATGTACATGGACTCTCTGCGGAGGCGTTGAGAATAAGTGTTTGGAAAGGCGACGTCGTCCTCAAAGATTTGAAACTAAAGTCAGAGGCACTAAATGCACTAAAGCTTCCTGTTACTGTCAAATCTGGCTTTGTTGGTACCATCACATTGAAGGTTCCTTGGAAAAGTTTGGGGAAAGAACCGGTGATTGTTCTAATCGATCGTGTCTTTATTCTTGCTAATCCCGCTCCTGATAGCCGGACTATAAAGGAGGAGGATAGAGAAAAACTTTTCCAAGACAAGCTTCAGCAAATTGAGGAAGCAGAGTCAGCAACACTTGATGCAATATCCAAGTCCAAGTTGGGAAATATATCTATAAGTAATGTGCATATCAGATATGAAGATTCTGTCAGTAATCCCGGCCATCCATTTTCTTCAGGTGTGACTTTGGCTAAGCTTGCCGCTGTTACAATGGATGAACAGGGAATGAAACTTTTGATACTAGTGTCATGCACCTTGATTGAGAGGCTAGCTCTTTATCATGATTCTGACCGGCTTCCTTGGGAGATTGACAAGAGATGGGAGGATATCAGTCCACATGAATGGATTGAGATATTTGAAGATGGCATAAATGAGCCTACCGATCACCATAAGTCGGTGTCAAAGTGGGCTATGAACCGGACATACTTGGTTTATCCTATCAATGCAGTCCTACAATATCATCGTCTTGGAAACCAAGAAAGAAGTGATCCTGAGATTCCGTTTGAGAAAGTTTCACTAGTCCTCTCGGATGTCTCTCTTACTCTTACCGAGGCTCAGTATCATGATTGGATAAAGCTCTTGGAAGCCGTTTCAAGATACAAGACATATATGGAAGTTTCTCATTTACGGCCTTCAGTTCCATCTCAAGGGCTCCTTATTTGTGGTGGCAGTATGCGGTACAGGCTACACTCCAGCAGCTGA

Protein sequence

>Msa1333280

LTRGGTYIKTNSSNFLHFHFHFISFQSILLRTLFILSFSFTPFLRITAYNNQTLILSFLHGSFPISPLIALYLLRLFIMFEAHVLHLLRKYLGEYVHGLSAEALRISVWKGDVVLKDLKLKSEALNALKLPVTVKSGFVGTITLKVPWKSLGKEPVIVLIDRVFILANPAPDSRTIKEEDREKLFQDKLQQIEEAESATLDAISKSKLGNISISNVHIRYEDSVSNPGHPFSSGVTLAKLAAVTMDEQGMKLLILVSCTLIERLALYHDSDRLPWEIDKRWEDISPHEWIEIFEDGINEPTDHHKSVSKWAMNRTYLVYPINAVLQYHRLGNQERSDPEIPFEKVSLVLSDVSLTLTEAQYHDWIKLLEAVSRYKTYMEVSHLRPSVPSQGLLICGGSMRYRLHSSS*