AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333340 MtrunA17_Chr4g0069981 96.283 861 10 1 1 861 1 839 0.0 1728
Msa1333340 MtrunA17_Chr8g0344911 57.429 848 293 14 21 859 27 815 0.0 910
Msa1333340 MtrunA17_Chr4g0014511 46.317 801 369 10 13 785 30 797 0.0 709
Msa1333340 MtrunA17_Chr5g0406801 28.872 523 288 18 118 631 63 510 7.73e-43 165
Msa1333340 MtrunA17_Chr4g0045791 25.758 528 294 18 56 546 19 485 2.76e-28 123
Msa1333340 MtrunA17_Chr7g0242661 26.579 380 206 14 267 645 24 331 3.25e-23 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333340 AT5G20840.1 60.000 845 295 10 24 861 23 831 0.0 1002
Msa1333340 AT3G43220.1 60.854 843 285 9 25 861 15 818 0.0 1000
Msa1333340 AT3G43220.3 60.664 844 280 10 25 861 15 813 0.0 993
Msa1333340 AT3G43220.2 64.404 722 226 5 25 742 15 709 0.0 940
Msa1333340 AT3G14205.1 57.794 834 295 11 25 853 19 800 0.0 912
Msa1333340 AT1G22620.1 51.324 680 281 6 1 657 1 653 0.0 716
Msa1333340 AT1G17340.1 51.672 658 268 6 24 675 18 631 0.0 674
Msa1333340 AT3G14205.2 56.336 655 251 10 204 853 1 625 0.0 669
Msa1333340 AT3G51830.1 25.362 552 323 19 109 649 52 525 5.48e-40 157
Msa1333340 AT3G59770.1 27.593 482 265 15 94 546 61 487 2.81e-31 133
Msa1333340 AT3G59770.3 26.514 479 274 14 94 546 61 487 3.54e-31 132
Msa1333340 AT3G51460.1 30.293 307 188 11 118 417 62 349 3.40e-30 127
Msa1333340 AT3G51460.1 33.333 144 70 3 501 631 379 509 1.23e-12 72.0
Msa1333340 AT5G66020.1 30.408 319 190 13 118 423 59 358 2.61e-29 124
Msa1333340 AT5G66020.1 34.091 132 85 2 501 631 377 507 1.50e-12 71.6
Msa1333340 AT3G59770.4 28.840 319 167 8 251 546 3 284 7.88e-24 108
Msa1333340 AT3G59770.2 28.428 299 155 7 270 546 1 262 4.35e-22 103

Find 248 sgRNAs with CRISPR-Local

Find 779 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGGATTCATCAAATTTC+TGG 0.135462 8_4:+53437314 Msa1333340:intron
TTTCATTTGGGGCAGATTCC+TGG 0.147842 8_4:+53442495 Msa1333340:intron
TGGACAGTTGCACTAGTTTA+TGG 0.162697 8_4:+53437762 Msa1333340:CDS
ATTGACTTGGCTTTGGCTTT+TGG 0.170559 8_4:+53445582 Msa1333340:three_prime_UTR
AAAGGAAATAAACAGGAATT+TGG 0.193279 8_4:+53445658 Msa1333340:three_prime_UTR
TTTGAAGACTACGCATAATT+TGG 0.197297 8_4:-53437635 None:intergenic
TATTAAATTCAAAATTATAA+TGG 0.226566 8_4:-53439228 None:intergenic
GGTTATTGTTTATTGGTAGA+TGG 0.252562 8_4:-53435723 None:intergenic
AATTCTTAACCCGAGGAATT+AGG 0.257387 8_4:+53437718 Msa1333340:CDS
GCATATGCTTTGACGTTAAC+AGG 0.266880 8_4:+53439953 Msa1333340:CDS
GGGAATTGGTTATTGTTTAT+TGG 0.267320 8_4:-53435730 None:intergenic
TGCACCTTAGAGCTTAATTA+AGG 0.272609 8_4:+53446012 Msa1333340:three_prime_UTR
GCAAAATAGTACATAGTAAA+TGG 0.274140 8_4:+53445792 Msa1333340:three_prime_UTR
TTAGATACAAGTGATGATTT+TGG 0.275529 8_4:+53435861 Msa1333340:five_prime_UTR
GTTTCAGTAGTAGATATTTC+AGG 0.285756 8_4:-53443230 None:intergenic
GTGGCTCAATCCCTCTTTAT+TGG 0.288377 8_4:+53438960 Msa1333340:CDS
ATCTTTATTGATGAAATCTA+TGG 0.295962 8_4:-53439730 None:intergenic
ACAAATGTGTTGCTGCTTCT+AGG 0.298619 8_4:+53439920 Msa1333340:CDS
AAACCACCCAGGTTGCAAAA+TGG 0.300839 8_4:+53440404 Msa1333340:CDS
AAATTTGTTACAACTTGTTA+TGG 0.303534 8_4:+53437198 Msa1333340:CDS
GAAAATGGAATAATTAGATT+AGG 0.305043 8_4:-53435680 None:intergenic
ACTAGAGAGAGCTAATATTA+AGG 0.306976 8_4:+53445627 Msa1333340:three_prime_UTR
CTTCAGCTGCTCTAACTTTG+TGG 0.307012 8_4:+53443937 Msa1333340:CDS
CACCAGAGAGAGGGAGGCTC+GGG 0.308268 8_4:+53436042 Msa1333340:five_prime_UTR
ATTAAATTCAAAATTATAAT+GGG 0.311361 8_4:-53439227 None:intergenic
AAAATGGAATAATTAGATTA+GGG 0.327993 8_4:-53435679 None:intergenic
GAGGGATTGAGCCACGATTC+TGG 0.328112 8_4:-53438952 None:intergenic
TTCGTTGAATGGGTGACTTA+TGG 0.330624 8_4:+53445490 Msa1333340:CDS
AGGAAATTCATTCTGATTGT+TGG 0.339396 8_4:-53445461 None:intergenic
AGCTGCCTCCACTAGTGATT+GGG 0.341951 8_4:+53444353 Msa1333340:CDS
TTGTTTGTTGCATGCTGTTT+TGG 0.343970 8_4:+53436004 Msa1333340:five_prime_UTR
ACCCATTCAACGAAAGTATC+AGG 0.345642 8_4:-53445481 None:intergenic
AACCACCCAGGTTGCAAAAT+GGG 0.346165 8_4:+53440405 Msa1333340:CDS
TCAGTTAAAGATTATACAAT+AGG 0.347086 8_4:+53445886 Msa1333340:three_prime_UTR
AGAATGGTCGAAGTATTCTT+AGG 0.349683 8_4:-53445705 None:intergenic
CGAAGAAGAAGGATTGGGTT+TGG 0.350857 8_4:-53435617 None:intergenic
AAATCCTTAATTAAGCTCTA+AGG 0.353251 8_4:-53446016 None:intergenic
CGCTGCCGAATTCTTCTGTT+CGG 0.354603 8_4:+53437430 Msa1333340:CDS
CACTATGATACAGGGAGAAT+TGG 0.355167 8_4:+53442574 Msa1333340:CDS
AACAGGATAAGCCTGCTCTA+TGG 0.356473 8_4:+53442533 Msa1333340:CDS
TAGGACACACTTGAGATATC+TGG 0.360524 8_4:+53437934 Msa1333340:intron
TTCATTTGGGGCAGATTCCT+GGG 0.360939 8_4:+53442496 Msa1333340:intron
TAAGAATACTTCGACCATTC+TGG 0.362790 8_4:+53445707 Msa1333340:three_prime_UTR
TGGCCACCAGCTTCACTCTC+TGG 0.369040 8_4:+53440502 Msa1333340:CDS
TCCTGATACTTTCGTTGAAT+GGG 0.374623 8_4:+53445480 Msa1333340:CDS
TTCCTGATACTTTCGTTGAA+TGG 0.375689 8_4:+53445479 Msa1333340:CDS
GAAGATCGAAGAAGAAGGAT+TGG 0.377861 8_4:-53435623 None:intergenic
GGGACAAGAGTAGGACTTAC+TGG 0.378417 8_4:+53437043 Msa1333340:CDS
ATTCTTAGGTTACGATCATA+TGG 0.380277 8_4:-53445691 None:intergenic
ATCTCTGTATGCAGAAGTTC+AGG 0.382199 8_4:+53436177 Msa1333340:CDS
CCTGATCGATCTGGTAAACC+TGG 0.382785 8_4:-53443176 None:intergenic
TGGGAGATTCGAGAACAAAA+AGG 0.383761 8_4:-53435597 None:intergenic
CTTCACGAGGCTTCTTCTCA+TGG 0.384869 8_4:-53439680 None:intergenic
AGCAAACTCTTGACGAAGAA+TGG 0.388366 8_4:-53439703 None:intergenic
GAAGAAGAAGGATTGGGTTT+GGG 0.388646 8_4:-53435616 None:intergenic
ATCACGAAAAGAAGGCAAAT+TGG 0.389252 8_4:+53437357 Msa1333340:CDS
GACCTGAAGACTGTCTAAAA+TGG 0.391946 8_4:+53440008 Msa1333340:CDS
TCTGATGAAAGCCCGCCAAC+TGG 0.392007 8_4:-53444297 None:intergenic
TCGTCCTTGGCATTTGGAGC+TGG 0.392779 8_4:-53443140 None:intergenic
GAGAGCTGCAACACAGTCTC+AGG 0.397084 8_4:+53442040 Msa1333340:CDS
CCACCAGAGAGAGGGAGGCT+CGG 0.402487 8_4:+53436041 Msa1333340:five_prime_UTR
AAGGAAATAAACAGGAATTT+GGG 0.404594 8_4:+53445659 Msa1333340:three_prime_UTR
AGTTTATGGCTTCTTTAAAC+AGG 0.406677 8_4:+53437776 Msa1333340:CDS
TGGAATAATTAGATTAGGGT+TGG 0.406892 8_4:-53435675 None:intergenic
CAGCTGCCTCCACTAGTGAT+TGG 0.407408 8_4:+53444352 Msa1333340:CDS
GGAGACATACATATGATATC+TGG 0.414280 8_4:-53439013 None:intergenic
AGCTGTCTCCGAGGCATTGA+GGG 0.414956 8_4:-53443845 None:intergenic
CTAACTTTGTGGACCTGGAT+TGG 0.419319 8_4:+53443948 Msa1333340:CDS
GATTGATGAGAGAGAGAAGA+AGG 0.420630 8_4:-53436137 None:intergenic
TTAGGATTCATCAAATTTCT+GGG 0.422231 8_4:+53437315 Msa1333340:intron
CATATTGTTACTTAATTTGT+GGG 0.423698 8_4:+53445922 Msa1333340:three_prime_UTR
CTGCTCTAACTTTGTGGACC+TGG 0.424534 8_4:+53443943 Msa1333340:CDS
AGGGTTGGGTTGAATTGAAC+GGG 0.426917 8_4:-53435660 None:intergenic
TCCCTCTCTCTGGTGGCTCA+AGG 0.427102 8_4:-53436034 None:intergenic
TCAGATCAGCACTATGATAC+AGG 0.427531 8_4:+53442565 Msa1333340:CDS
ACAGGCTTAGGTTCCTTCAC+TGG 0.430155 8_4:+53439766 Msa1333340:CDS
AAGCCTGCTCTATGGGAGTT+GGG 0.430289 8_4:+53442541 Msa1333340:CDS
GACAGAACAAATAGTCTTTG+AGG 0.433630 8_4:+53438889 Msa1333340:CDS
TTTACGAGACCATGTTTGTC+TGG 0.434070 8_4:+53437691 Msa1333340:CDS
CTCCCTTCTCCTGATCGATC+TGG 0.436584 8_4:-53443185 None:intergenic
GGAATAATTAGATTAGGGTT+GGG 0.438486 8_4:-53435674 None:intergenic
GTTATTGTTTATTGGTAGAT+GGG 0.438766 8_4:-53435722 None:intergenic
TGCATCAAATCGTTAGCTAC+AGG 0.440463 8_4:-53440560 None:intergenic
CAAACCTAGTGCCAGCATAA+TGG 0.443644 8_4:-53437996 None:intergenic
TTCTGCATACAGAGATTAGA+AGG 0.445139 8_4:-53436170 None:intergenic
TGGATGCAGTGATGTTGATA+AGG 0.445645 8_4:+53440274 Msa1333340:intron
ACATATTGTTACTTAATTTG+TGG 0.449658 8_4:+53445921 Msa1333340:three_prime_UTR
TCATCAGAAAATGTTGTCAA+TGG 0.455041 8_4:+53444312 Msa1333340:CDS
GAAGGTGATTCCTAATTCCT+CGG 0.457663 8_4:-53437728 None:intergenic
AAGATCTGTCTGAAGAGAAC+AGG 0.459440 8_4:+53439748 Msa1333340:CDS
GAAAATCTTGTCAAAAGATA+CGG 0.461610 8_4:+53439200 Msa1333340:CDS
GGTTGCAAAATGGGGTGCTC+AGG 0.463707 8_4:+53440414 Msa1333340:CDS
ACAGGATAAGCCTGCTCTAT+GGG 0.464182 8_4:+53442534 Msa1333340:CDS
ACTGTGTTGCAGCTCTCCAC+TGG 0.464687 8_4:-53442034 None:intergenic
TTCACGAGGCTTCTTCTCAT+GGG 0.465661 8_4:-53439679 None:intergenic
CCCTCTCTCTGGTGGCTCAA+GGG 0.466617 8_4:-53436033 None:intergenic
AGCGCGTAAAGGAAATAAAC+AGG 0.471258 8_4:+53445651 Msa1333340:three_prime_UTR
ACAAACGCAGATCGAAAATT+CGG 0.472353 8_4:-53435791 None:intergenic
TTGGCATTTGGAGCTGGCAT+AGG 0.477513 8_4:-53443134 None:intergenic
CTGATGAAAGCCCGCCAACT+GGG 0.478745 8_4:-53444296 None:intergenic
ACTACGTGTGTAGGTATTTG+AGG 0.480830 8_4:+53438825 Msa1333340:intron
ATATTTACTATTCTGAGCAT+GGG 0.481341 8_4:+53443909 Msa1333340:CDS
GATCATATGCAAAAGTTCAA+TGG 0.484142 8_4:-53445525 None:intergenic
ACATTCCCTTTCTGTATATG+TGG 0.484372 8_4:-53437124 None:intergenic
CATATTTACTATTCTGAGCA+TGG 0.485512 8_4:+53443908 Msa1333340:CDS
GCGTATGGGTTGGCTGCTAT+TGG 0.485753 8_4:+53440482 Msa1333340:CDS
CCCTTGAGCCACCAGAGAGA+GGG 0.485911 8_4:+53436033 Msa1333340:five_prime_UTR
GACCAACTGCATAGACTGCT+TGG 0.487313 8_4:+53440436 Msa1333340:CDS
AACGCTATTACAGCAATGCT+TGG 0.489364 8_4:+53442081 Msa1333340:CDS
AAGATCGAAGAAGAAGGATT+GGG 0.489767 8_4:-53435622 None:intergenic
ATCAATGAAGAATTATGAAT+CGG 0.489799 8_4:+53435901 Msa1333340:five_prime_UTR
TTCAAAAGATCTTTCTCAGA+CGG 0.490858 8_4:+53443086 Msa1333340:CDS
ACAACTTGTTATGGAATTGT+TGG 0.490970 8_4:+53437207 Msa1333340:CDS
TTAGACCGAACAGAAGAATT+CGG 0.496268 8_4:-53437435 None:intergenic
TAAGCCTGCTCTATGGGAGT+TGG 0.497420 8_4:+53442540 Msa1333340:CDS
GGCCACCAGCTTCACTCTCT+GGG 0.499483 8_4:+53440503 Msa1333340:CDS
TTACCAACTCCCCAGTTGGC+GGG 0.506116 8_4:+53444286 Msa1333340:CDS
AAGGTGATTCCTAATTCCTC+GGG 0.511087 8_4:-53437727 None:intergenic
AAGCTGTCTCCGAGGCATTG+AGG 0.512463 8_4:-53443846 None:intergenic
CGAAAATTCGGAGCCCCGGA+AGG 0.513108 8_4:-53435779 None:intergenic
AATGTTGCACAGTATGCGTA+TGG 0.513231 8_4:+53440467 Msa1333340:CDS
GGTGCTGCCCCAATCACTAG+TGG 0.513621 8_4:-53444361 None:intergenic
AATCCCTCTTTATTGGTCAC+AGG 0.514437 8_4:+53438967 Msa1333340:CDS
GGATGCAGTGATGTTGATAA+GGG 0.516366 8_4:+53440275 Msa1333340:intron
TAGACAGTCTTCAGGTCTCA+AGG 0.518608 8_4:-53440002 None:intergenic
CTATTACAGCAATGCTTGGA+TGG 0.519003 8_4:+53442085 Msa1333340:CDS
AGAAGATCACGCCATTATGC+TGG 0.520437 8_4:+53437985 Msa1333340:CDS
TCTCGTACATTTAGCTCTGA+AGG 0.522438 8_4:-53437093 None:intergenic
TTCAGGTGACGACTCACAAA+AGG 0.526694 8_4:-53443213 None:intergenic
ATCACCTTCAGAATACTACT+TGG 0.527072 8_4:+53437742 Msa1333340:CDS
GTTGTCAATGGAGAGATAGT+AGG 0.528010 8_4:+53444324 Msa1333340:CDS
CAGGCTTAGGTTCCTTCACT+GGG 0.528748 8_4:+53439767 Msa1333340:CDS
GTGATAAGTAGCATGTAGTA+AGG 0.529154 8_4:-53437339 None:intergenic
GACACACTTGCACATCAATA+CGG 0.530766 8_4:+53440602 Msa1333340:CDS
TTCTTCCCCAGTGTCAAAGA+AGG 0.532300 8_4:+53439145 Msa1333340:intron
TGTCTGAAGAGAACAGGCTT+AGG 0.532830 8_4:+53439754 Msa1333340:CDS
TTACCAGATCGATCAGGAGA+AGG 0.533267 8_4:+53443182 Msa1333340:CDS
GGAGGGTACTTAAGATTGAC+CGG 0.534027 8_4:+53437064 Msa1333340:CDS
TTCCCTTTCTGTATATGTGG+TGG 0.534784 8_4:-53437121 None:intergenic
TTCCACCACATATACAGAAA+GGG 0.535317 8_4:+53437119 Msa1333340:CDS
AGGAAACATTACCTCTCGTA+TGG 0.538442 8_4:-53444004 None:intergenic
TAATTCCCAGAGAGTGAAGC+TGG 0.543123 8_4:-53440508 None:intergenic
GTTTCCTGTGACCAATAAAG+AGG 0.544642 8_4:-53438971 None:intergenic
GAAACATTGATTCCGTCACT+TGG 0.546133 8_4:-53440362 None:intergenic
AAGCCCGCCAACTGGGGAGT+TGG 0.546753 8_4:-53444289 None:intergenic
AAAACACTCATAATTAACCT+TGG 0.548025 8_4:-53435960 None:intergenic
CCAGGTTTACCAGATCGATC+AGG 0.552288 8_4:+53443176 Msa1333340:CDS
GAGGCGAGGTGTTAATGAGA+AGG 0.552586 8_4:+53438844 Msa1333340:CDS
AGGATGCTAATGATTTAGAA+AGG 0.552894 8_4:+53440336 Msa1333340:CDS
CACGCCATTATGCTGGCACT+AGG 0.553330 8_4:+53437992 Msa1333340:CDS
ATTCCACCACATATACAGAA+AGG 0.553716 8_4:+53437118 Msa1333340:CDS
GCATGTCAGCATTACCAGAA+TGG 0.554952 8_4:-53445721 None:intergenic
TAGGGTTGGGTTGAATTGAA+CGG 0.555674 8_4:-53435661 None:intergenic
TCATTTGGGGCAGATTCCTG+GGG 0.556264 8_4:+53442497 Msa1333340:intron
AGAGCAGGCTTATCCTGTTG+TGG 0.556812 8_4:-53442529 None:intergenic
ATTACCAACTCCCCAGTTGG+CGG 0.559125 8_4:+53444285 Msa1333340:CDS
CCGAGCCTCCCTCTCTCTGG+TGG 0.560183 8_4:-53436041 None:intergenic
AACATGTGTGACACTGAGAC+AGG 0.560905 8_4:+53437660 Msa1333340:CDS
AATATTAAGGAAGCGCGTAA+AGG 0.562291 8_4:+53445640 Msa1333340:three_prime_UTR
GAACCCAACTCCCATAGAGC+AGG 0.565495 8_4:-53442544 None:intergenic
GCATACAGAGATTAGAAGGA+GGG 0.565588 8_4:-53436166 None:intergenic
AGGCGAGGTGTTAATGAGAA+GGG 0.565672 8_4:+53438845 Msa1333340:CDS
ACCAGAGAGAGGGAGGCTCG+GGG 0.566219 8_4:+53436043 Msa1333340:five_prime_UTR
AACAAATTTCAGTCCACCAG+TGG 0.570600 8_4:-53437184 None:intergenic
AACGGGAGGTACCTTCAGGC+TGG 0.575667 8_4:-53444382 None:intergenic
CTATGCAGATATTCTCTGCA+AGG 0.575855 8_4:+53442006 Msa1333340:intron
CTGACGAAGATAGCCAATCC+AGG 0.576864 8_4:-53443961 None:intergenic
TTGAGCCACCAGAGAGAGGG+AGG 0.577013 8_4:+53436036 Msa1333340:five_prime_UTR
GTTGGACCGTGCTTCACTGT+AGG 0.579907 8_4:-53445443 None:intergenic
TGCTACTTATCACGAAAAGA+AGG 0.580505 8_4:+53437349 Msa1333340:CDS
TCCCTTGAGCCACCAGAGAG+AGG 0.580775 8_4:+53436032 Msa1333340:five_prime_UTR
TCGATCAGGAGAAGGGAGCA+AGG 0.581707 8_4:+53443190 Msa1333340:CDS
AGATCGAAAATTCGGAGCCC+CGG 0.582699 8_4:-53435783 None:intergenic
AAAGGTTTGGAAGGAACCAC+GGG 0.583589 8_4:-53435579 None:intergenic
GCAGATATTCTCTGCAAGGA+GGG 0.583756 8_4:+53442010 Msa1333340:intron
TCTCTGCAAGGAGGGGCCAG+TGG 0.585901 8_4:+53442018 Msa1333340:CDS
GCATCAAATCGTTAGCTACA+GGG 0.586834 8_4:-53440559 None:intergenic
ATCCAAGCAGTCTATGCAGT+TGG 0.588700 8_4:-53440438 None:intergenic
GAGGAGAAGATCGAAGAAGA+AGG 0.588887 8_4:-53435628 None:intergenic
AGACAAACATGGTCTCGTAA+AGG 0.590439 8_4:-53437689 None:intergenic
CTGTCCAAGTAGTATTCTGA+AGG 0.591516 8_4:-53437746 None:intergenic
TACCAGATCGATCAGGAGAA+GGG 0.591538 8_4:+53443183 Msa1333340:CDS
GTCTTTGAGGATGTTCCAGA+AGG 0.592378 8_4:+53438902 Msa1333340:CDS
TGTTGTATTTGAAGCAACCA+AGG 0.592821 8_4:+53435943 Msa1333340:five_prime_UTR
ATTGTTGTTTCTTAGACCCG+TGG 0.593167 8_4:+53435563 Msa1333340:five_prime_UTR
CACACTTGAGATATCTGGAC+GGG 0.594165 8_4:+53437939 Msa1333340:CDS
ACCACCCAGGTTGCAAAATG+GGG 0.595419 8_4:+53440406 Msa1333340:CDS
GTTGTGGCTGAAAATGCCCC+AGG 0.596610 8_4:-53442513 None:intergenic
CCAGAGAGAGGGAGGCTCGG+GGG 0.596612 8_4:+53436044 Msa1333340:five_prime_UTR
AAATTATGCGTAGTCTTCAA+AGG 0.596643 8_4:+53437637 Msa1333340:CDS
TCAATTACCAACTCCCCAGT+TGG 0.602105 8_4:+53444282 Msa1333340:CDS
TCATATTCCACATGCACAGT+AGG 0.602773 8_4:-53440308 None:intergenic
AATGAAGAATTATGAATCGG+TGG 0.604360 8_4:+53435904 Msa1333340:five_prime_UTR
TTTCCTGTGACCAATAAAGA+GGG 0.607467 8_4:-53438970 None:intergenic
ACTGCATAGACTGCTTGGAT+CGG 0.607478 8_4:+53440441 Msa1333340:CDS
TGATAGGGAGGGACAAGAGT+AGG 0.608467 8_4:+53437034 Msa1333340:CDS
TGGTTCTGCTGCACACAACA+AGG 0.608611 8_4:+53440625 Msa1333340:CDS
CAGATCAGCACTATGATACA+GGG 0.609155 8_4:+53442566 Msa1333340:CDS
TAGGATACCTCAGATTCAGT+TGG 0.610057 8_4:-53445424 None:intergenic
CAGGCTTTATGAAACTCGAT+CGG 0.610692 8_4:+53436196 Msa1333340:CDS
TATTTACTATTCTGAGCATG+GGG 0.610777 8_4:+53443910 Msa1333340:CDS
AATAAAATATATCAGTGCAA+CGG 0.610889 8_4:-53445547 None:intergenic
AAAAGGTTTGGAAGGAACCA+CGG 0.615459 8_4:-53435580 None:intergenic
GTTTGTGAAGATCCCAGTGA+AGG 0.617266 8_4:-53439779 None:intergenic
TGCAGATATTCTCTGCAAGG+AGG 0.618132 8_4:+53442009 Msa1333340:intron
GAGGGAGCCAACTGAATCTG+AGG 0.618463 8_4:+53445417 Msa1333340:CDS
TTGGGGCAGCACCAGCCTGA+AGG 0.618633 8_4:+53444371 Msa1333340:CDS
ATTGTTACTTAATTTGTGGG+AGG 0.618778 8_4:+53445925 Msa1333340:three_prime_UTR
CTGATCGATCTGGTAAACCT+GGG 0.622268 8_4:-53443175 None:intergenic
ATAGCATAGCTTAGTTACGA+TGG 0.624134 8_4:+53436094 Msa1333340:exon
TAGGATTCATCAAATTTCTG+GGG 0.624534 8_4:+53437316 Msa1333340:intron
CAGATATTCTCTGCAAGGAG+GGG 0.628456 8_4:+53442011 Msa1333340:intron
GCTGCCTCCACTAGTGATTG+GGG 0.629411 8_4:+53444354 Msa1333340:CDS
CATACAGAGATTAGAAGGAG+GGG 0.633316 8_4:-53436165 None:intergenic
GAGGGGAACAAAGCCACTGG+TGG 0.633626 8_4:+53437171 Msa1333340:CDS
CACAAAGTTAGAGCAGCTGA+AGG 0.636197 8_4:-53443936 None:intergenic
TGGAATGAATTCTTAACCCG+AGG 0.638057 8_4:+53437711 Msa1333340:CDS
TGATGAAAGCCCGCCAACTG+GGG 0.638798 8_4:-53444295 None:intergenic
CATGAGGGGAACAAAGCCAC+TGG 0.638961 8_4:+53437168 Msa1333340:CDS
GTGTGTAGGTATTTGAGGCG+AGG 0.640048 8_4:+53438830 Msa1333340:intron
GAATTCATTCCAGACAAACA+TGG 0.641108 8_4:-53437700 None:intergenic
TTAGCTCTGAAGGATCTAGC+CGG 0.642480 8_4:-53437083 None:intergenic
AGCTCTATCATCCAGAATCG+TGG 0.643157 8_4:+53438941 Msa1333340:CDS
GCTGTCTCCGAGGCATTGAG+GGG 0.643426 8_4:-53443844 None:intergenic
TATGCCAGCTCCAAATGCCA+AGG 0.648918 8_4:+53443136 Msa1333340:CDS
TGACGAAGAATGGCTTCACG+AGG 0.650347 8_4:-53439693 None:intergenic
CGAACAGAAGAATTCGGCAG+CGG 0.650877 8_4:-53437429 None:intergenic
GCTGCCCCAATCACTAGTGG+AGG 0.651935 8_4:-53444358 None:intergenic
AGGCAAATTGGTGCAATCTG+CGG 0.653150 8_4:+53437369 Msa1333340:CDS
ACATGGTCTCGTAAAGGACA+TGG 0.658838 8_4:-53437683 None:intergenic
TGCACAGTATGCGTATGGGT+TGG 0.662237 8_4:+53440472 Msa1333340:CDS
TTAGAAAGGAAACCAAGTGA+CGG 0.662687 8_4:+53440350 Msa1333340:CDS
TGCATACAGAGATTAGAAGG+AGG 0.665671 8_4:-53436167 None:intergenic
AGGTATCCTACAGTGAAGCA+CGG 0.673830 8_4:+53445437 Msa1333340:CDS
GTTGCTGCTTCTAGGCAAAG+TGG 0.675255 8_4:+53439928 Msa1333340:CDS
CTGTCTCCGAGGCATTGAGG+GGG 0.676585 8_4:-53443843 None:intergenic
ATCATTCTACCAAACCACCC+AGG 0.677746 8_4:+53440393 Msa1333340:CDS
ATGCACAGTTGACCTTACGA+AGG 0.679186 8_4:+53437590 Msa1333340:CDS
ACAAGAGTAGGACTTACTGG+AGG 0.685355 8_4:+53437046 Msa1333340:CDS
CAAGAGTAGGACTTACTGGA+GGG 0.686151 8_4:+53437047 Msa1333340:CDS
GAATTGGTGATGATGATGCA+AGG 0.695760 8_4:+53442590 Msa1333340:CDS
ACACACTTGAGATATCTGGA+CGG 0.701041 8_4:+53437938 Msa1333340:CDS
GTGAAGAAGATCCATACGAG+AGG 0.705451 8_4:+53443993 Msa1333340:CDS
ATGTTGCACAGTATGCGTAT+GGG 0.713751 8_4:+53440468 Msa1333340:CDS
TTCCCAGAGAGTGAAGCTGG+TGG 0.719552 8_4:-53440505 None:intergenic
ACACTTGCACATCAATACGG+TGG 0.734158 8_4:+53440605 Msa1333340:CDS
ATTGAACGGGACAAGATACG+AGG 0.746445 8_4:-53435647 None:intergenic
GCATGTGGAATATGATAACG+AGG 0.768280 8_4:+53440316 Msa1333340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAAAATTAATTAAAGT+AGG - chr8_4:53436635-53436654 None:intergenic 10.0%
!! ATATTACAATATCTATAAAA+CGG - chr8_4:53439038-53439057 None:intergenic 10.0%
!! GTATTCAAATATAATTTATA+GGG + chr8_4:53442612-53442631 Msa1333340:intron 10.0%
!!! TGAAATATATTTTATTTTTG+TGG + chr8_4:53444544-53444563 Msa1333340:intron 10.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr8_4:53438656-53438675 Msa1333340:intron 100.0%
!! AAAATGGAATAATTAGATTA+GGG - chr8_4:53435682-53435701 None:intergenic 15.0%
!!! AATTATTCCATTTTCAATTT+TGG + chr8_4:53435688-53435707 Msa1333340:five_prime_UTR 15.0%
!!! ATTATTCCATTTTCAATTTT+GGG + chr8_4:53435689-53435708 Msa1333340:five_prime_UTR 15.0%
!! ATTGTAAAATAATGAATGTA+AGG - chr8_4:53436530-53436549 None:intergenic 15.0%
!! TAAAATAATACAATATCCAA+AGG - chr8_4:53437829-53437848 None:intergenic 15.0%
!!! AATGTGATTTTTTTTTTCAA+TGG + chr8_4:53438407-53438426 Msa1333340:intron 15.0%
!! TATTACAATATCTATAAAAC+GGG - chr8_4:53439037-53439056 None:intergenic 15.0%
!! AACAAGAAAAATTAATATTC+AGG - chr8_4:53439288-53439307 None:intergenic 15.0%
!!! TATTAATTTTTCTTGTTTGT+TGG + chr8_4:53439291-53439310 Msa1333340:intron 15.0%
!!! AAATTGAAATTATACAGTTT+TGG - chr8_4:53439596-53439615 None:intergenic 15.0%
!!! TTTCATTTTTTATAAGACTT+GGG + chr8_4:53439623-53439642 Msa1333340:intron 15.0%
!!! ATGTTTTTATGTTTATTGAT+CGG - chr8_4:53440169-53440188 None:intergenic 15.0%
!! TAAAAACATTAACAAAAAAG+CGG + chr8_4:53440180-53440199 Msa1333340:intron 15.0%
!!! AAATTTTTTTAAAGTGAAAG+AGG + chr8_4:53442261-53442280 Msa1333340:intron 15.0%
!! GGTATTCAAATATAATTTAT+AGG + chr8_4:53442611-53442630 Msa1333340:intron 15.0%
!! GAAAGAAATACAAAAAATAT+TGG - chr8_4:53444191-53444210 None:intergenic 15.0%
!! TATAAAAAATAATATAGTGC+CGG - chr8_4:53444221-53444240 None:intergenic 15.0%
!! ATATAATATAATGTTTAGCA+AGG + chr8_4:53444518-53444537 Msa1333340:intron 15.0%
!!! TTTTGTGGAAAATTAAATAA+CGG + chr8_4:53444559-53444578 Msa1333340:intron 15.0%
!!! TATTCTTTTGTAATTGTATT+AGG + chr8_4:53444959-53444978 Msa1333340:intron 15.0%
!!! ATTCTTTTGTAATTGTATTA+GGG + chr8_4:53444960-53444979 Msa1333340:intron 15.0%
!! TTCAAAATAGATATACATTA+AGG - chr8_4:53445006-53445025 None:intergenic 15.0%
!! GAAAATGGAATAATTAGATT+AGG - chr8_4:53435683-53435702 None:intergenic 20.0%
!!! TTGATTTTTTTGTTGTTGAA+GGG - chr8_4:53435753-53435772 None:intergenic 20.0%
!!! TTTGATTTTTTTGTTGTTGA+AGG - chr8_4:53435754-53435773 None:intergenic 20.0%
!!! AAAAATCAAATTTTTCCTTC+CGG + chr8_4:53435764-53435783 Msa1333340:five_prime_UTR 20.0%
!! AAACTCAAGTAAAAATTAGT+GGG + chr8_4:53435816-53435835 Msa1333340:five_prime_UTR 20.0%
!! ATCAATGAAGAATTATGAAT+CGG + chr8_4:53435901-53435920 Msa1333340:five_prime_UTR 20.0%
!! TTAGAATTTAAACAAAAACG+AGG - chr8_4:53436600-53436619 None:intergenic 20.0%
!!! AAATTTGTTACAACTTGTTA+TGG + chr8_4:53437198-53437217 Msa1333340:CDS 20.0%
!!! TCAATTCTAAAAATGAAAAC+AGG + chr8_4:53437463-53437482 Msa1333340:CDS 20.0%
!!! ACTTCTTTCATTAATTTTTC+AGG + chr8_4:53437553-53437572 Msa1333340:intron 20.0%
!! ATAAAAAAAAAAGTGACTCA+AGG - chr8_4:53438165-53438184 None:intergenic 20.0%
!! GATTAAACAAACAAAGAAAA+AGG - chr8_4:53439264-53439283 None:intergenic 20.0%
!! TGTACAAAATATTTAGATAG+AGG + chr8_4:53439425-53439444 Msa1333340:intron 20.0%
!! AGAATCATACCTAATAAATT+TGG + chr8_4:53439451-53439470 Msa1333340:intron 20.0%
!! ACAAAACATCCAAATTTATT+AGG - chr8_4:53439463-53439482 None:intergenic 20.0%
!! ATTATTGTAAATAGGACTAT+TGG + chr8_4:53439533-53439552 Msa1333340:intron 20.0%
!! TTATTGTAAATAGGACTATT+GGG + chr8_4:53439534-53439553 Msa1333340:intron 20.0%
!!! AAATTATACAGTTTTGGTAA+GGG - chr8_4:53439590-53439609 None:intergenic 20.0%
!!! GTTTCATTTTTTATAAGACT+TGG + chr8_4:53439622-53439641 Msa1333340:intron 20.0%
!! ATCTTTATTGATGAAATCTA+TGG - chr8_4:53439733-53439752 None:intergenic 20.0%
!! TTTGCTGGAAATAAAATAAA+AGG - chr8_4:53439897-53439916 None:intergenic 20.0%
!! AACTACATATTCTTAGAATT+TGG + chr8_4:53440740-53440759 Msa1333340:intron 20.0%
!! ACTACATATTCTTAGAATTT+GGG + chr8_4:53440741-53440760 Msa1333340:intron 20.0%
!! TTGTAAGTCTTAAAAAAGTT+GGG - chr8_4:53441139-53441158 None:intergenic 20.0%
!! TTTGTAAGTCTTAAAAAAGT+TGG - chr8_4:53441140-53441159 None:intergenic 20.0%
!!! AACTTTTTTAAGACTTACAA+AGG + chr8_4:53441139-53441158 Msa1333340:intron 20.0%
!! TCTCAAAGAAATTATTTAAC+AGG - chr8_4:53441422-53441441 None:intergenic 20.0%
!!! TAACACTCATTTTTTTCATT+GGG + chr8_4:53441572-53441591 Msa1333340:intron 20.0%
!!! ATTTTTCTAAAAATGATGCA+TGG - chr8_4:53441823-53441842 None:intergenic 20.0%
!! GTTATTTATATGTATGTCTT+CGG + chr8_4:53442159-53442178 Msa1333340:intron 20.0%
!! TTATTTATATGTATGTCTTC+GGG + chr8_4:53442160-53442179 Msa1333340:intron 20.0%
!!! TACTTTTACAATATTAGCTT+TGG + chr8_4:53442414-53442433 Msa1333340:intron 20.0%
!!! AATGGTTGAATATTTTACAT+TGG + chr8_4:53442681-53442700 Msa1333340:intron 20.0%
!!! ATGGTTGAATATTTTACATT+GGG + chr8_4:53442682-53442701 Msa1333340:intron 20.0%
!! TATCAACATATAAATCACTA+AGG - chr8_4:53442941-53442960 None:intergenic 20.0%
!! TTGATATTGTCTAATCATTT+GGG + chr8_4:53442955-53442974 Msa1333340:intron 20.0%
!! TAATGGTTACTATAAAACTT+TGG + chr8_4:53443049-53443068 Msa1333340:intron 20.0%
!!! ACTATAAAACTTTGGTTTAT+AGG + chr8_4:53443057-53443076 Msa1333340:intron 20.0%
!!! ACAAATTATTCTAGTTTACA+TGG + chr8_4:53443506-53443525 Msa1333340:intron 20.0%
!!! GTTTTTAAAAAATGCATCAA+CGG + chr8_4:53443598-53443617 Msa1333340:intron 20.0%
!!! ATTGATTCACATTGATAAAA+TGG - chr8_4:53443703-53443722 None:intergenic 20.0%
!! TTTATAGATCATCATTTGAA+AGG + chr8_4:53444235-53444254 Msa1333340:intron 20.0%
!! CATTATATTATATCAAGTGA+AGG - chr8_4:53444511-53444530 None:intergenic 20.0%
!! ATAATTGAACTATTAAGGAT+AGG + chr8_4:53444601-53444620 Msa1333340:intron 20.0%
!!! AAAAAAAAAACTGATTTGTG+AGG - chr8_4:53444924-53444943 None:intergenic 20.0%
!! ATTATTAATTAGGATGAACT+GGG - chr8_4:53445050-53445069 None:intergenic 20.0%
!! ATCAAATAACAAAAGAAAAG+TGG - chr8_4:53445098-53445117 None:intergenic 20.0%
!! AATAAAATATATCAGTGCAA+CGG - chr8_4:53445550-53445569 None:intergenic 20.0%
!! TCAGTTAAAGATTATACAAT+AGG + chr8_4:53445886-53445905 Msa1333340:three_prime_UTR 20.0%
!!! ACATATTGTTACTTAATTTG+TGG + chr8_4:53445921-53445940 Msa1333340:three_prime_UTR 20.0%
!!! CATATTGTTACTTAATTTGT+GGG + chr8_4:53445922-53445941 Msa1333340:three_prime_UTR 20.0%
! GAAAAACCCAAAATTGAAAA+TGG - chr8_4:53435698-53435717 None:intergenic 25.0%
! GTTATTGTTTATTGGTAGAT+GGG - chr8_4:53435725-53435744 None:intergenic 25.0%
!! AAAATCAAATTTTTCCTTCC+GGG + chr8_4:53435765-53435784 Msa1333340:five_prime_UTR 25.0%
!! CACTAATTTTTACTTGAGTT+TGG - chr8_4:53435817-53435836 None:intergenic 25.0%
! CAAACTCAAGTAAAAATTAG+TGG + chr8_4:53435815-53435834 Msa1333340:five_prime_UTR 25.0%
!! TTAGATACAAGTGATGATTT+TGG + chr8_4:53435861-53435880 Msa1333340:five_prime_UTR 25.0%
! AAAACACTCATAATTAACCT+TGG - chr8_4:53435963-53435982 None:intergenic 25.0%
! ATAAAAAGAGAGTCAGAAAA+GGG - chr8_4:53436227-53436246 None:intergenic 25.0%
! AATAAAAAGAGAGTCAGAAA+AGG - chr8_4:53436228-53436247 None:intergenic 25.0%
!!! TGATTTTAATGTCCAGTATT+AGG + chr8_4:53436326-53436345 Msa1333340:intron 25.0%
!!! CTTATTTTAATGTTGCAATG+TGG + chr8_4:53436456-53436475 Msa1333340:CDS 25.0%
! CAAATAGATACTCAAATTCA+AGG - chr8_4:53436713-53436732 None:intergenic 25.0%
! CTTGAATTTGAGTATCTATT+TGG + chr8_4:53436711-53436730 Msa1333340:intron 25.0%
!! TTTGTCATTTATCTTGACTT+TGG + chr8_4:53436769-53436788 Msa1333340:intron 25.0%
! TCTACCATGCATATTAAATA+TGG + chr8_4:53436881-53436900 Msa1333340:intron 25.0%
!! TCATACTAAATTTTCCACAT+GGG - chr8_4:53436909-53436928 None:intergenic 25.0%
!! TTCATACTAAATTTTCCACA+TGG - chr8_4:53436910-53436929 None:intergenic 25.0%
! GAAAATTTAGTATGAAGCTT+TGG + chr8_4:53436914-53436933 Msa1333340:intron 25.0%
!!! TTACGTGTTATTCTGATTTT+AGG + chr8_4:53437297-53437316 Msa1333340:intron 25.0%
!! TTTAGGATTCATCAAATTTC+TGG + chr8_4:53437314-53437333 Msa1333340:intron 25.0%
! TTAGGATTCATCAAATTTCT+GGG + chr8_4:53437315-53437334 Msa1333340:intron 25.0%
! CAATAAAATTTGACACATTG+AGG - chr8_4:53437498-53437517 None:intergenic 25.0%
! ATCAGATATTAGTAACCAAA+AGG - chr8_4:53438084-53438103 None:intergenic 25.0%
! GAATCATATATTTGATAGAC+TGG - chr8_4:53438130-53438149 None:intergenic 25.0%
!! TACGAAAGTTGCAATTTTAA+GGG - chr8_4:53438232-53438251 None:intergenic 25.0%
!! TTACGAAAGTTGCAATTTTA+AGG - chr8_4:53438233-53438252 None:intergenic 25.0%
! ATAACTGACACATAAAACAA+TGG - chr8_4:53438786-53438805 None:intergenic 25.0%
!!! ATTTTAATTACTACGTGTGT+AGG + chr8_4:53438816-53438835 Msa1333340:intron 25.0%
!!! ATGATAGAGCTAATTTTGAT+GGG - chr8_4:53438932-53438951 None:intergenic 25.0%
! TACTTACATAAGCAAACATT+TGG - chr8_4:53439117-53439136 None:intergenic 25.0%
!! ATTTTCAAAGTGAAGTTTAG+TGG - chr8_4:53439186-53439205 None:intergenic 25.0%
! GAAAATCTTGTCAAAAGATA+CGG + chr8_4:53439200-53439219 Msa1333340:CDS 25.0%
! GTTGCAGTATTATTGTAAAT+AGG + chr8_4:53439525-53439544 Msa1333340:intron 25.0%
!!! AATTATACAGTTTTGGTAAG+GGG - chr8_4:53439589-53439608 None:intergenic 25.0%
!!! GAAATTATACAGTTTTGGTA+AGG - chr8_4:53439591-53439610 None:intergenic 25.0%
! AATCTAAGAAATGTTGTAGA+AGG - chr8_4:53440080-53440099 None:intergenic 25.0%
! TAAGAAGGAAAAAAGAACAA+TGG + chr8_4:53440132-53440151 Msa1333340:intron 25.0%
!! TTTGGTAGAATGATTTTCAT+CGG - chr8_4:53440387-53440406 None:intergenic 25.0%
!! TTGCATATTCTAATTTTGCT+TGG + chr8_4:53440683-53440702 Msa1333340:intron 25.0%
!! TGCATATTCTAATTTTGCTT+GGG + chr8_4:53440684-53440703 Msa1333340:intron 25.0%
! AATATCATAATCCAGTTGTT+AGG - chr8_4:53441039-53441058 None:intergenic 25.0%
! TCTAATACCATCTTAGAATT+TGG + chr8_4:53441060-53441079 Msa1333340:intron 25.0%
! TAGAAAATCCACCTTAATTA+TGG - chr8_4:53441387-53441406 None:intergenic 25.0%
!!! TTTCTTTGAGATATTGTCAT+TGG + chr8_4:53441431-53441450 Msa1333340:intron 25.0%
!!! CTAACACTCATTTTTTTCAT+TGG + chr8_4:53441571-53441590 Msa1333340:intron 25.0%
! TAACAGTCATAATTAGACAT+GGG - chr8_4:53441880-53441899 None:intergenic 25.0%
! TTAACAGTCATAATTAGACA+TGG - chr8_4:53441881-53441900 None:intergenic 25.0%
! AGAATAAGTCCATCAAAAAA+GGG - chr8_4:53441973-53441992 None:intergenic 25.0%
! TAGAATAAGTCCATCAAAAA+AGG - chr8_4:53441974-53441993 None:intergenic 25.0%
!!! TTGCAAAGTCATACTTTTTT+TGG + chr8_4:53442383-53442402 Msa1333340:intron 25.0%
!! GCTAATATTGTAAAAGTACA+AGG - chr8_4:53442412-53442431 None:intergenic 25.0%
! ATTACCTTTCTGTTTCATTT+GGG + chr8_4:53442483-53442502 Msa1333340:intron 25.0%
!! ATATATAGAAAGCATGGAAA+GGG - chr8_4:53442737-53442756 None:intergenic 25.0%
! ATCATGATATATAGAAAGCA+TGG - chr8_4:53442743-53442762 None:intergenic 25.0%
! ACATGCAACAGTTTAATTAT+AGG - chr8_4:53442818-53442837 None:intergenic 25.0%
! GTTGATATTGTCTAATCATT+TGG + chr8_4:53442954-53442973 Msa1333340:intron 25.0%
! TGATATTGTCTAATCATTTG+GGG + chr8_4:53442956-53442975 Msa1333340:intron 25.0%
! ATATTTACTATTCTGAGCAT+GGG + chr8_4:53443909-53443928 Msa1333340:CDS 25.0%
!!! TTTTTTTGTGTGTGTGAATA+TGG + chr8_4:53444120-53444139 Msa1333340:intron 25.0%
! ATCTATTCCATCATATTCAT+AGG - chr8_4:53444458-53444477 None:intergenic 25.0%
!!! AGTTCAATTATAGCCTTATA+CGG - chr8_4:53444592-53444611 None:intergenic 25.0%
! AGGCTATAATTGAACTATTA+AGG + chr8_4:53444596-53444615 Msa1333340:intron 25.0%
! GATTATTAATTAGGATGAAC+TGG - chr8_4:53445051-53445070 None:intergenic 25.0%
! TCAGGTAGTGATTATTAATT+AGG - chr8_4:53445060-53445079 None:intergenic 25.0%
! TTTATGACACAAATCTTGAA+AGG + chr8_4:53445117-53445136 Msa1333340:intron 25.0%
!!! CCAAATTAAAAGTTGATGTA+CGG - chr8_4:53445153-53445172 None:intergenic 25.0%
! ATAAGATTCAATTCACGATT+TGG + chr8_4:53445237-53445256 Msa1333340:intron 25.0%
! CTGATACTATCTAAAAACTT+GGG - chr8_4:53445322-53445341 None:intergenic 25.0%
! ACTGATACTATCTAAAAACT+TGG - chr8_4:53445323-53445342 None:intergenic 25.0%
! TAATTCTATCTAACATTCTC+AGG + chr8_4:53445393-53445412 Msa1333340:intron 25.0%
!!! TGACATTTTTTCAATTGACT+TGG + chr8_4:53445569-53445588 Msa1333340:three_prime_UTR 25.0%
! AAAGGAAATAAACAGGAATT+TGG + chr8_4:53445658-53445677 Msa1333340:three_prime_UTR 25.0%
! AAGGAAATAAACAGGAATTT+GGG + chr8_4:53445659-53445678 Msa1333340:three_prime_UTR 25.0%
! GCAAAATAGTACATAGTAAA+TGG + chr8_4:53445792-53445811 Msa1333340:three_prime_UTR 25.0%
!!! ACTGTTTTTTTCTTCTTCTT+TGG + chr8_4:53445863-53445882 Msa1333340:three_prime_UTR 25.0%
! AAATCCTTAATTAAGCTCTA+AGG - chr8_4:53446019-53446038 None:intergenic 25.0%
GGAATAATTAGATTAGGGTT+GGG - chr8_4:53435677-53435696 None:intergenic 30.0%
TGGAATAATTAGATTAGGGT+TGG - chr8_4:53435678-53435697 None:intergenic 30.0%
GGTTATTGTTTATTGGTAGA+TGG - chr8_4:53435726-53435745 None:intergenic 30.0%
GGGAATTGGTTATTGTTTAT+TGG - chr8_4:53435733-53435752 None:intergenic 30.0%
!!! TTTTTGTTGTTGAAGGGAAT+TGG - chr8_4:53435747-53435766 None:intergenic 30.0%
! AAATCAAATTTTTCCTTCCG+GGG + chr8_4:53435766-53435785 Msa1333340:five_prime_UTR 30.0%
AATGAAGAATTATGAATCGG+TGG + chr8_4:53435904-53435923 Msa1333340:five_prime_UTR 30.0%
! GTGTTTTGCATTGTGAATTT+TGG + chr8_4:53435976-53435995 Msa1333340:five_prime_UTR 30.0%
!!! GAGTGTTTTTAGAAGAAACA+TGG + chr8_4:53436478-53436497 Msa1333340:CDS 30.0%
!!! TGTTTTTAGAAGAAACATGG+TGG + chr8_4:53436481-53436500 Msa1333340:CDS 30.0%
TAAACAAAAACGAGGAAACA+AGG - chr8_4:53436592-53436611 None:intergenic 30.0%
ATTTCTGATGCATTTCAGAA+AGG - chr8_4:53436670-53436689 None:intergenic 30.0%
TCATTTATCTTGACTTTGGT+GGG + chr8_4:53436773-53436792 Msa1333340:intron 30.0%
GGATCCATATTTAATATGCA+TGG - chr8_4:53436888-53436907 None:intergenic 30.0%
TATTAAATATGGATCCCATG+TGG + chr8_4:53436892-53436911 Msa1333340:intron 30.0%
!! ATTTAGTATGAAGCTTTGGA+TGG + chr8_4:53436918-53436937 Msa1333340:intron 30.0%
! CAAAAAAAGAAGGAAGCATA+AGG - chr8_4:53436996-53437015 None:intergenic 30.0%
! CACAGAACTTTTACATGATA+GGG + chr8_4:53437019-53437038 Msa1333340:intron 30.0%
!! ACAACTTGTTATGGAATTGT+TGG + chr8_4:53437207-53437226 Msa1333340:CDS 30.0%
TAGGATTCATCAAATTTCTG+GGG + chr8_4:53437316-53437335 Msa1333340:intron 30.0%
TTTGAAGACTACGCATAATT+TGG - chr8_4:53437638-53437657 None:intergenic 30.0%
AAATTATGCGTAGTCTTCAA+AGG + chr8_4:53437637-53437656 Msa1333340:CDS 30.0%
AGTTTATGGCTTCTTTAAAC+AGG + chr8_4:53437776-53437795 Msa1333340:CDS 30.0%
ACTGAATATCTGATGTCTAT+TGG + chr8_4:53437902-53437921 Msa1333340:intron 30.0%
! ACGAAAGTTGCAATTTTAAG+GGG - chr8_4:53438231-53438250 None:intergenic 30.0%
TTGAAGTTTCGCAAAATTCA+GGG - chr8_4:53438259-53438278 None:intergenic 30.0%
! TTTGAAGTTTCGCAAAATTC+AGG - chr8_4:53438260-53438279 None:intergenic 30.0%
TATTTGCACATATGGTTATC+AGG - chr8_4:53438460-53438479 None:intergenic 30.0%
TGCAAATTAAAAATTGAGGG+GGG - chr8_4:53438483-53438502 None:intergenic 30.0%
GTGCAAATTAAAAATTGAGG+GGG - chr8_4:53438484-53438503 None:intergenic 30.0%
CGTGCAAATTAAAAATTGAG+GGG - chr8_4:53438485-53438504 None:intergenic 30.0%
GCGTGCAAATTAAAAATTGA+GGG - chr8_4:53438486-53438505 None:intergenic 30.0%
TGCGTGCAAATTAAAAATTG+AGG - chr8_4:53438487-53438506 None:intergenic 30.0%
!!! TTTGCACGCAAGTTTTAAAT+TGG + chr8_4:53438497-53438516 Msa1333340:intron 30.0%
! GATGATAGAGCTAATTTTGA+TGG - chr8_4:53438933-53438952 None:intergenic 30.0%
! ACACATTTTGCTGATGTATT+TGG + chr8_4:53439322-53439341 Msa1333340:intron 30.0%
CCTTAACTCTAATCAAGTAA+GGG - chr8_4:53439506-53439525 None:intergenic 30.0%
ACCTTAACTCTAATCAAGTA+AGG - chr8_4:53439507-53439526 None:intergenic 30.0%
! ATCTTCACAAACATTTTCAG+AGG + chr8_4:53439790-53439809 Msa1333340:CDS 30.0%
!! CGCAATCTAATTTGCTAAAA+AGG - chr8_4:53439843-53439862 None:intergenic 30.0%
ATAAAAACGTACTCTGTAGA+TGG - chr8_4:53440034-53440053 None:intergenic 30.0%
! TGATCCCTGATATTAAGTTT+TGG + chr8_4:53440254-53440273 Msa1333340:intron 30.0%
GCATCCAAAACTTAATATCA+GGG - chr8_4:53440261-53440280 None:intergenic 30.0%
TGCATCCAAAACTTAATATC+AGG - chr8_4:53440262-53440281 None:intergenic 30.0%
AGGATGCTAATGATTTAGAA+AGG + chr8_4:53440336-53440355 Msa1333340:CDS 30.0%
!! ATTTGATGCAGTTTTATGAG+CGG + chr8_4:53440573-53440592 Msa1333340:CDS 30.0%
TATTCTTAGAATTTGGGCTT+AGG + chr8_4:53440747-53440766 Msa1333340:intron 30.0%
ATTCTTAGAATTTGGGCTTA+GGG + chr8_4:53440748-53440767 Msa1333340:intron 30.0%
AAATATGCTCAACTGCAATT+AGG + chr8_4:53440890-53440909 Msa1333340:intron 30.0%
AATATGCTCAACTGCAATTA+GGG + chr8_4:53440891-53440910 Msa1333340:intron 30.0%
TGGAAAATCCATCTTAATTG+CGG - chr8_4:53440953-53440972 None:intergenic 30.0%
! TTTTACTGCAATGGTATCTT+CGG - chr8_4:53441326-53441345 None:intergenic 30.0%
! TCATCTACATTTTACTGCAA+TGG - chr8_4:53441335-53441354 None:intergenic 30.0%
! CACTCGTGTGATATTTTATT+GGG - chr8_4:53441363-53441382 None:intergenic 30.0%
! AACCTCATAAAACCATGTTT+TGG + chr8_4:53441485-53441504 Msa1333340:intron 30.0%
! ACCTCATAAAACCATGTTTT+GGG + chr8_4:53441486-53441505 Msa1333340:intron 30.0%
ATTCCTTAAGTAATGTGAGT+AGG - chr8_4:53441537-53441556 None:intergenic 30.0%
TTCATTGGGTGAAATTCATA+TGG + chr8_4:53441586-53441605 Msa1333340:intron 30.0%
TCATTGGGTGAAATTCATAT+GGG + chr8_4:53441587-53441606 Msa1333340:intron 30.0%
TGAAATTCATATGGGTAAAG+TGG + chr8_4:53441595-53441614 Msa1333340:intron 30.0%
GAAATTCATATGGGTAAAGT+GGG + chr8_4:53441596-53441615 Msa1333340:intron 30.0%
CTATTGGGTGAAATCAATTT+GGG - chr8_4:53441643-53441662 None:intergenic 30.0%
TCTATTGGGTGAAATCAATT+TGG - chr8_4:53441644-53441663 None:intergenic 30.0%
! AAATTGATTTCACCCAATAG+AGG + chr8_4:53441643-53441662 Msa1333340:intron 30.0%
TACTAACAACAAAGCTAACA+AGG - chr8_4:53441768-53441787 None:intergenic 30.0%
AATGATGCATGGAATCAATA+CGG - chr8_4:53441812-53441831 None:intergenic 30.0%
CATACTATAAATCCAACCAT+TGG - chr8_4:53442197-53442216 None:intergenic 30.0%
! ATGTCTGCTATCTTTTTGTT+AGG + chr8_4:53442214-53442233 Msa1333340:intron 30.0%
! TGTCTGCTATCTTTTTGTTA+GGG + chr8_4:53442215-53442234 Msa1333340:intron 30.0%
!! GTTAGGGAAAGTTGTTATTT+CGG + chr8_4:53442231-53442250 Msa1333340:intron 30.0%
GATTACCTTTCTGTTTCATT+TGG + chr8_4:53442482-53442501 Msa1333340:intron 30.0%
TTACCTTTCTGTTTCATTTG+GGG + chr8_4:53442484-53442503 Msa1333340:intron 30.0%
AGGAAGGTTAGTAAACAAAA+AGG - chr8_4:53442651-53442670 None:intergenic 30.0%
!! TTTTTGTTTACTAACCTTCC+TGG + chr8_4:53442650-53442669 Msa1333340:intron 30.0%
!! TTTTGTTTACTAACCTTCCT+GGG + chr8_4:53442651-53442670 Msa1333340:intron 30.0%
! GATATATAGAAAGCATGGAA+AGG - chr8_4:53442738-53442757 None:intergenic 30.0%
TCTGTGAAAAGACACTAAAA+TGG + chr8_4:53442762-53442781 Msa1333340:intron 30.0%
TGTATGCATTCAAGTGATAT+TGG + chr8_4:53442835-53442854 Msa1333340:intron 30.0%
AGCACAGAAAAAAGGATATT+AGG + chr8_4:53442864-53442883 Msa1333340:intron 30.0%
AATATACGCTATCTTTCGTT+AGG + chr8_4:53442911-53442930 Msa1333340:intron 30.0%
TTCAAAAGATCTTTCTCAGA+CGG + chr8_4:53443086-53443105 Msa1333340:CDS 30.0%
GTTTCAGTAGTAGATATTTC+AGG - chr8_4:53443233-53443252 None:intergenic 30.0%
! AGAGTGACATTTCATTTTCA+AGG + chr8_4:53443255-53443274 Msa1333340:CDS 30.0%
TGAAGTTTGTAATATGTGTC+TGG + chr8_4:53443300-53443319 Msa1333340:intron 30.0%
!! CATGCAGATTTTTCAGATTA+CGG - chr8_4:53443395-53443414 None:intergenic 30.0%
TACAAATTAGACTCTATAGC+TGG - chr8_4:53443578-53443597 None:intergenic 30.0%
ATCATTATATCTTCTGCCAT+TGG + chr8_4:53443672-53443691 Msa1333340:intron 30.0%
CATATTTACTATTCTGAGCA+TGG + chr8_4:53443908-53443927 Msa1333340:CDS 30.0%
TATTTACTATTCTGAGCATG+GGG + chr8_4:53443910-53443929 Msa1333340:CDS 30.0%
TCATCAGAAAATGTTGTCAA+TGG + chr8_4:53444312-53444331 Msa1333340:CDS 30.0%
!! ATGTTTTGCTATACCATAAC+GGG - chr8_4:53444402-53444421 None:intergenic 30.0%
!! GATGTTTTGCTATACCATAA+CGG - chr8_4:53444403-53444422 None:intergenic 30.0%
! AAACAGTATTGGGTTATTAG+AGG - chr8_4:53444486-53444505 None:intergenic 30.0%
AGTGAAGGTAAAACAGTATT+GGG - chr8_4:53444496-53444515 None:intergenic 30.0%
AAGTGAAGGTAAAACAGTAT+TGG - chr8_4:53444497-53444516 None:intergenic 30.0%
CAGTATGTTACCATTCATTT+AGG + chr8_4:53444814-53444833 Msa1333340:intron 30.0%
!! CCGTACATCAACTTTTAATT+TGG + chr8_4:53445150-53445169 Msa1333340:intron 30.0%
! CAATTCACGATTTGGAAATT+AGG + chr8_4:53445245-53445264 Msa1333340:intron 30.0%
TCTTCGGATTCTATAAATCT+CGG + chr8_4:53445268-53445287 Msa1333340:intron 30.0%
AGGAAATTCATTCTGATTGT+TGG - chr8_4:53445464-53445483 None:intergenic 30.0%
GATCATATGCAAAAGTTCAA+TGG - chr8_4:53445528-53445547 None:intergenic 30.0%
!!! TTTTTCAATTGACTTGGCTT+TGG + chr8_4:53445575-53445594 Msa1333340:three_prime_UTR 30.0%
ACTAGAGAGAGCTAATATTA+AGG + chr8_4:53445627-53445646 Msa1333340:three_prime_UTR 30.0%
ATTCTTAGGTTACGATCATA+TGG - chr8_4:53445694-53445713 None:intergenic 30.0%
TGCAAACAACAACAAAAAGA+AGG - chr8_4:53445835-53445854 None:intergenic 30.0%
!!! TCTTTTTGTTGTTGTTTGCA+TGG + chr8_4:53445835-53445854 Msa1333340:three_prime_UTR 30.0%
!! ATTGTTACTTAATTTGTGGG+AGG + chr8_4:53445925-53445944 Msa1333340:three_prime_UTR 30.0%
GATTCGAGAACAAAAAGGTT+TGG - chr8_4:53435595-53435614 None:intergenic 35.0%
AAGATCGAAGAAGAAGGATT+GGG - chr8_4:53435625-53435644 None:intergenic 35.0%
ACAAACGCAGATCGAAAATT+CGG - chr8_4:53435794-53435813 None:intergenic 35.0%
! TGTTGTATTTGAAGCAACCA+AGG + chr8_4:53435943-53435962 Msa1333340:five_prime_UTR 35.0%
!! TTGTTTGTTGCATGCTGTTT+TGG + chr8_4:53436004-53436023 Msa1333340:five_prime_UTR 35.0%
ATAGCATAGCTTAGTTACGA+TGG + chr8_4:53436094-53436113 Msa1333340:exon 35.0%
TTCTGCATACAGAGATTAGA+AGG - chr8_4:53436173-53436192 None:intergenic 35.0%
GTTGTAGAAAAATTTGTGCG+TGG + chr8_4:53436297-53436316 Msa1333340:intron 35.0%
AACACACTTTGACCTAATAC+TGG - chr8_4:53436341-53436360 None:intergenic 35.0%
!!! TGTCACTTTTCAGCTCAATT+TGG + chr8_4:53436431-53436450 Msa1333340:intron 35.0%
TGCATTTCAGAAAGGCAAAA+TGG - chr8_4:53436662-53436681 None:intergenic 35.0%
ATTCACTGTTAACCTTGAAG+TGG + chr8_4:53436744-53436763 Msa1333340:intron 35.0%
TTCACTGTTAACCTTGAAGT+GGG + chr8_4:53436745-53436764 Msa1333340:intron 35.0%
AAATGACAAAACCCACTTCA+AGG - chr8_4:53436759-53436778 None:intergenic 35.0%
GTCATTTATCTTGACTTTGG+TGG + chr8_4:53436772-53436791 Msa1333340:intron 35.0%
CTTGTGTAATCTCATTGACA+GGG - chr8_4:53436849-53436868 None:intergenic 35.0%
TATGCATGGTAGATTAGACA+GGG - chr8_4:53436874-53436893 None:intergenic 35.0%
ATATGCATGGTAGATTAGAC+AGG - chr8_4:53436875-53436894 None:intergenic 35.0%
TTCTGTGGCACAAAAAAAGA+AGG - chr8_4:53437006-53437025 None:intergenic 35.0%
CCTATCATGTAAAAGTTCTG+TGG - chr8_4:53437021-53437040 None:intergenic 35.0%
! CCACAGAACTTTTACATGAT+AGG + chr8_4:53437018-53437037 Msa1333340:intron 35.0%
! AGAACTTTTACATGATAGGG+AGG + chr8_4:53437022-53437041 Msa1333340:intron 35.0%
! GAACTTTTACATGATAGGGA+GGG + chr8_4:53437023-53437042 Msa1333340:intron 35.0%
ATTCCACCACATATACAGAA+AGG + chr8_4:53437118-53437137 Msa1333340:CDS 35.0%
TTCCACCACATATACAGAAA+GGG + chr8_4:53437119-53437138 Msa1333340:CDS 35.0%
ACATTCCCTTTCTGTATATG+TGG - chr8_4:53437127-53437146 None:intergenic 35.0%
!! AATGTTCTGATCTTTTGAGG+CGG + chr8_4:53437142-53437161 Msa1333340:CDS 35.0%
TGCAATGGAAGAAGGATTTA+TGG - chr8_4:53437242-53437261 None:intergenic 35.0%
GATAAATTGTCGACATGCAA+TGG - chr8_4:53437257-53437276 None:intergenic 35.0%
GTGATAAGTAGCATGTAGTA+AGG - chr8_4:53437342-53437361 None:intergenic 35.0%
! TGCTACTTATCACGAAAAGA+AGG + chr8_4:53437349-53437368 Msa1333340:CDS 35.0%
ATCACGAAAAGAAGGCAAAT+TGG + chr8_4:53437357-53437376 Msa1333340:CDS 35.0%
TTAGACCGAACAGAAGAATT+CGG - chr8_4:53437438-53437457 None:intergenic 35.0%
TGAAAAAGAAGTCCTTCGTA+AGG - chr8_4:53437605-53437624 None:intergenic 35.0%
GAATTCATTCCAGACAAACA+TGG - chr8_4:53437703-53437722 None:intergenic 35.0%
AATTCTTAACCCGAGGAATT+AGG + chr8_4:53437718-53437737 Msa1333340:CDS 35.0%
ATCACCTTCAGAATACTACT+TGG + chr8_4:53437742-53437761 Msa1333340:CDS 35.0%
TTCTGCTCTTGAAATTCCTT+TGG + chr8_4:53437810-53437829 Msa1333340:intron 35.0%
!! AAAACTACTTGAGTTGAGCA+GGG - chr8_4:53437871-53437890 None:intergenic 35.0%
! TGTCTATTGGTGACTTCATT+AGG + chr8_4:53437915-53437934 Msa1333340:intron 35.0%
! CATCGTATTTTCTTTGCACA+TGG + chr8_4:53438026-53438045 Msa1333340:intron 35.0%
CATATATTTGATAGACTGGC+TGG - chr8_4:53438126-53438145 None:intergenic 35.0%
!! CGAAAGTTGCAATTTTAAGG+GGG - chr8_4:53438230-53438249 None:intergenic 35.0%
TGAAGTTTCGCAAAATTCAG+GGG - chr8_4:53438258-53438277 None:intergenic 35.0%
TGACAGACGATTGACAATTT+CGG - chr8_4:53438292-53438311 None:intergenic 35.0%
AAAATTATGCCACATCACAG+AGG + chr8_4:53438372-53438391 Msa1333340:intron 35.0%
AAATTATGCCACATCACAGA+GGG + chr8_4:53438373-53438392 Msa1333340:intron 35.0%
!!! CACGCAAGTTTTAAATTGGA+GGG + chr8_4:53438501-53438520 Msa1333340:intron 35.0%
!!! ACGCAAGTTTTAAATTGGAG+GGG + chr8_4:53438502-53438521 Msa1333340:intron 35.0%
GACAGAACAAATAGTCTTTG+AGG + chr8_4:53438889-53438908 Msa1333340:CDS 35.0%
TTTCCTGTGACCAATAAAGA+GGG - chr8_4:53438973-53438992 None:intergenic 35.0%
GGAGACATACATATGATATC+TGG - chr8_4:53439016-53439035 None:intergenic 35.0%
TTTCTCTCATCTTCTCTACT+TGG + chr8_4:53439079-53439098 Msa1333340:intron 35.0%
! TTTCTTGTTTGTTGGTTGTG+TGG + chr8_4:53439299-53439318 Msa1333340:intron 35.0%
CCCTTACTTGATTAGAGTTA+AGG + chr8_4:53439503-53439522 Msa1333340:intron 35.0%
!! AGGACTATTGGGTTAGTATT+TGG + chr8_4:53439545-53439564 Msa1333340:intron 35.0%
CTTGTGTATCAGCTTAAACT+CGG - chr8_4:53439870-53439889 None:intergenic 35.0%
CCTTCTTAAAGACGTTATAC+AGG - chr8_4:53440120-53440139 None:intergenic 35.0%
! CCTGTATAACGTCTTTAAGA+AGG + chr8_4:53440117-53440136 Msa1333340:intron 35.0%
AACTTTAAGCACTTCCTTGT+TGG - chr8_4:53440217-53440236 None:intergenic 35.0%
TTAGAAAGGAAACCAAGTGA+CGG + chr8_4:53440350-53440369 Msa1333340:CDS 35.0%
! GGTCATCGAGATCAATTTTT+GGG - chr8_4:53440541-53440560 None:intergenic 35.0%
!! TCTTCAAAGCGGATTTTGTA+GGG - chr8_4:53440783-53440802 None:intergenic 35.0%
!! TACAAAATCCGCTTTGAAGA+CGG + chr8_4:53440783-53440802 Msa1333340:intron 35.0%
!! TTTTTAGTGTGCTTGGTTGA+GGG - chr8_4:53440873-53440892 None:intergenic 35.0%
!!! ATTTTTAGTGTGCTTGGTTG+AGG - chr8_4:53440874-53440893 None:intergenic 35.0%
!!! GAGCATATTTTTAGTGTGCT+TGG - chr8_4:53440880-53440899 None:intergenic 35.0%
TGGCCTAATAATAGACTGTA+GGG + chr8_4:53440923-53440942 Msa1333340:intron 35.0%
!! CGATTTTGAGGAGATAAGTT+GGG - chr8_4:53441094-53441113 None:intergenic 35.0%
CCAACTTATCTCCTCAAAAT+CGG + chr8_4:53441092-53441111 Msa1333340:intron 35.0%
GCAGTAAAATGTAGATGAAG+TGG + chr8_4:53441337-53441356 Msa1333340:intron 35.0%
! CCACTCGTGTGATATTTTAT+TGG - chr8_4:53441364-53441383 None:intergenic 35.0%
CCAATAAAATATCACACGAG+TGG + chr8_4:53441361-53441380 Msa1333340:intron 35.0%
!!! TCCCAAAACATGGTTTTATG+AGG - chr8_4:53441490-53441509 None:intergenic 35.0%
GACTACTTTATCCCAAAACA+TGG - chr8_4:53441500-53441519 None:intergenic 35.0%
TCATAGCACTCGAGTATTTA+TGG + chr8_4:53441685-53441704 Msa1333340:intron 35.0%
CATAGCACTCGAGTATTTAT+GGG + chr8_4:53441686-53441705 Msa1333340:intron 35.0%
ATGATGCATGGAATCAATAC+GGG - chr8_4:53441811-53441830 None:intergenic 35.0%
ACAGTAAAGTGCAGTATAAC+AGG - chr8_4:53441922-53441941 None:intergenic 35.0%
CACTTTACTGTAGTGTATAC+TGG + chr8_4:53441931-53441950 Msa1333340:intron 35.0%
!!! TGTTCTCTACCCTTTTTTGA+TGG + chr8_4:53441961-53441980 Msa1333340:intron 35.0%
GCTATATCATTTCCAATGGT+TGG + chr8_4:53442182-53442201 Msa1333340:intron 35.0%
GAGGATAACAGAGTAGAATT+AGG + chr8_4:53442280-53442299 Msa1333340:intron 35.0%
ACAAAAACAAAACCGCAACA+AGG + chr8_4:53442325-53442344 Msa1333340:intron 35.0%
! AAAAGTATGTTGCCTTGTTG+CGG - chr8_4:53442340-53442359 None:intergenic 35.0%
GATCAATAACCAGTAAAGAC+AGG - chr8_4:53442458-53442477 None:intergenic 35.0%
! TACATTGGGATTTTTCTGTC+TGG + chr8_4:53442696-53442715 Msa1333340:intron 35.0%
ATAGTAACCATTAGCTGCAT+CGG - chr8_4:53443042-53443061 None:intergenic 35.0%
! AATTTTTCGTCCTTGGCATT+TGG - chr8_4:53443149-53443168 None:intergenic 35.0%
! GTTTGAGAATTTTTCGTCCT+TGG - chr8_4:53443156-53443175 None:intergenic 35.0%
! GAATAATTTGTCTCGTCTTC+TGG - chr8_4:53443497-53443516 None:intergenic 35.0%
CCAAAGGATAAAGAAATGAG+AGG - chr8_4:53443533-53443552 None:intergenic 35.0%
CCTCTCATTTCTTTATCCTT+TGG + chr8_4:53443530-53443549 Msa1333340:intron 35.0%
! TGATGATGCAAACATTGAAC+AGG - chr8_4:53443656-53443675 None:intergenic 35.0%
! TGATAAAATGGAGCATCCAA+TGG - chr8_4:53443691-53443710 None:intergenic 35.0%
AATTGCACAAGTACTTAGCA+CGG + chr8_4:53444035-53444054 Msa1333340:intron 35.0%
! GTTTCAAGAAGTATGTTTCC+AGG + chr8_4:53444064-53444083 Msa1333340:intron 35.0%
GAAGTATGTTTCCAGGATTA+TGG + chr8_4:53444071-53444090 Msa1333340:intron 35.0%
TGTATTTCTTTCCTTCTGTC+CGG + chr8_4:53444199-53444218 Msa1333340:intron 35.0%
TCACTGTCCTATGAATATGA+TGG + chr8_4:53444448-53444467 Msa1333340:intron 35.0%
CTAAATTAGCCCACCAATAT+TGG - chr8_4:53444749-53444768 None:intergenic 35.0%
AATGGTAACATACTGTAGTG+CGG - chr8_4:53444809-53444828 None:intergenic 35.0%
TTGTGTGGATCCTAAATGAA+TGG - chr8_4:53444827-53444846 None:intergenic 35.0%
TGGGATTCATCATAGTGAAT+TGG - chr8_4:53445031-53445050 None:intergenic 35.0%
! CGATTTGGAAATTAGGTCTT+CGG + chr8_4:53445252-53445271 Msa1333340:intron 35.0%
! GGCAGTTTGATAATCATGTT+AGG + chr8_4:53445289-53445308 Msa1333340:intron 35.0%
TATCTAACATTCTCAGGAGA+GGG + chr8_4:53445399-53445418 Msa1333340:intron 35.0%
TTCCTGATACTTTCGTTGAA+TGG + chr8_4:53445479-53445498 Msa1333340:CDS 35.0%
TCCTGATACTTTCGTTGAAT+GGG + chr8_4:53445480-53445499 Msa1333340:CDS 35.0%
! AATATTAAGGAAGCGCGTAA+AGG + chr8_4:53445640-53445659 Msa1333340:three_prime_UTR 35.0%
! AGAATGGTCGAAGTATTCTT+AGG - chr8_4:53445708-53445727 None:intergenic 35.0%
TAAGAATACTTCGACCATTC+TGG + chr8_4:53445707-53445726 Msa1333340:three_prime_UTR 35.0%
TGCACCTTAGAGCTTAATTA+AGG + chr8_4:53446012-53446031 Msa1333340:three_prime_UTR 35.0%
!! ATTGTTGTTTCTTAGACCCG+TGG + chr8_4:53435563-53435582 Msa1333340:five_prime_UTR 40.0%
AAAAGGTTTGGAAGGAACCA+CGG - chr8_4:53435583-53435602 None:intergenic 40.0%
CGAGAACAAAAAGGTTTGGA+AGG - chr8_4:53435591-53435610 None:intergenic 40.0%
TGGGAGATTCGAGAACAAAA+AGG - chr8_4:53435600-53435619 None:intergenic 40.0%
GAAGAAGAAGGATTGGGTTT+GGG - chr8_4:53435619-53435638 None:intergenic 40.0%
GAAGATCGAAGAAGAAGGAT+TGG - chr8_4:53435626-53435645 None:intergenic 40.0%
!! TAGGGTTGGGTTGAATTGAA+CGG - chr8_4:53435664-53435683 None:intergenic 40.0%
GATTGATGAGAGAGAGAAGA+AGG - chr8_4:53436140-53436159 None:intergenic 40.0%
CATACAGAGATTAGAAGGAG+GGG - chr8_4:53436168-53436187 None:intergenic 40.0%
GCATACAGAGATTAGAAGGA+GGG - chr8_4:53436169-53436188 None:intergenic 40.0%
TGCATACAGAGATTAGAAGG+AGG - chr8_4:53436170-53436189 None:intergenic 40.0%
ATCTCTGTATGCAGAAGTTC+AGG + chr8_4:53436177-53436196 Msa1333340:CDS 40.0%
! CAGGCTTTATGAAACTCGAT+CGG + chr8_4:53436196-53436215 Msa1333340:CDS 40.0%
AGCATCTTAAGCATGAAGAG+AGG - chr8_4:53436809-53436828 None:intergenic 40.0%
CCTTGTGTAATCTCATTGAC+AGG - chr8_4:53436850-53436869 None:intergenic 40.0%
CCTGTCAATGAGATTACACA+AGG + chr8_4:53436847-53436866 Msa1333340:intron 40.0%
!!! ATGAAGCTTTGGATGGCTTT+TGG + chr8_4:53436925-53436944 Msa1333340:intron 40.0%
!! TCTCGTACATTTAGCTCTGA+AGG - chr8_4:53437096-53437115 None:intergenic 40.0%
TTCCCTTTCTGTATATGTGG+TGG - chr8_4:53437124-53437143 None:intergenic 40.0%
! GGGAATGTTCTGATCTTTTG+AGG + chr8_4:53437139-53437158 Msa1333340:CDS 40.0%
AACAAATTTCAGTCCACCAG+TGG - chr8_4:53437187-53437206 None:intergenic 40.0%
AGACAAACATGGTCTCGTAA+AGG - chr8_4:53437692-53437711 None:intergenic 40.0%
TTTACGAGACCATGTTTGTC+TGG + chr8_4:53437691-53437710 Msa1333340:CDS 40.0%
TGGAATGAATTCTTAACCCG+AGG + chr8_4:53437711-53437730 Msa1333340:CDS 40.0%
AAGGTGATTCCTAATTCCTC+GGG - chr8_4:53437730-53437749 None:intergenic 40.0%
GAAGGTGATTCCTAATTCCT+CGG - chr8_4:53437731-53437750 None:intergenic 40.0%
CTGTCCAAGTAGTATTCTGA+AGG - chr8_4:53437749-53437768 None:intergenic 40.0%
! TGGACAGTTGCACTAGTTTA+TGG + chr8_4:53437762-53437781 Msa1333340:CDS 40.0%
!! AAACTACTTGAGTTGAGCAG+GGG - chr8_4:53437870-53437889 None:intergenic 40.0%
!! CAAAACTACTTGAGTTGAGC+AGG - chr8_4:53437872-53437891 None:intergenic 40.0%
GACATCAGATATTCAGTTGC+AGG - chr8_4:53437899-53437918 None:intergenic 40.0%
TAGGACACACTTGAGATATC+TGG + chr8_4:53437934-53437953 Msa1333340:intron 40.0%
ACACACTTGAGATATCTGGA+CGG + chr8_4:53437938-53437957 Msa1333340:CDS 40.0%
! AAGGAGCATGCATCAGAAAA+TGG - chr8_4:53438065-53438084 None:intergenic 40.0%
! TTTCTGATGCATGCTCCTTT+TGG + chr8_4:53438066-53438085 Msa1333340:intron 40.0%
AAGTTTCGCAAAATTCAGGG+GGG - chr8_4:53438256-53438275 None:intergenic 40.0%
GAAGTTTCGCAAAATTCAGG+GGG - chr8_4:53438257-53438276 None:intergenic 40.0%
ACGATTGACAATTTCGGAAG+GGG - chr8_4:53438286-53438305 None:intergenic 40.0%
GACGATTGACAATTTCGGAA+GGG - chr8_4:53438287-53438306 None:intergenic 40.0%
AGACGATTGACAATTTCGGA+AGG - chr8_4:53438288-53438307 None:intergenic 40.0%
TGTTGGATGGAGGAAACTAT+CGG - chr8_4:53438323-53438342 None:intergenic 40.0%
! GCATAATTTTTCTGACCGCA+TGG - chr8_4:53438362-53438381 None:intergenic 40.0%
AATTATGCCACATCACAGAG+GGG + chr8_4:53438374-53438393 Msa1333340:intron 40.0%
CATATGGTTATCAGGTCAGA+GGG - chr8_4:53438452-53438471 None:intergenic 40.0%
ACATATGGTTATCAGGTCAG+AGG - chr8_4:53438453-53438472 None:intergenic 40.0%
!!! GCACGCAAGTTTTAAATTGG+AGG + chr8_4:53438500-53438519 Msa1333340:intron 40.0%
!!! CGCAAGTTTTAAATTGGAGG+GGG + chr8_4:53438503-53438522 Msa1333340:intron 40.0%
!!! GCAAGTTTTAAATTGGAGGG+GGG + chr8_4:53438504-53438523 Msa1333340:intron 40.0%
! CATGACTTTTCTGACCACAT+AGG + chr8_4:53438605-53438624 Msa1333340:intron 40.0%
ACTACGTGTGTAGGTATTTG+AGG + chr8_4:53438825-53438844 Msa1333340:intron 40.0%
!! ATTTTGATGGGAAGACCTTC+TGG - chr8_4:53438920-53438939 None:intergenic 40.0%
AATCCCTCTTTATTGGTCAC+AGG + chr8_4:53438967-53438986 Msa1333340:CDS 40.0%
GTTTCCTGTGACCAATAAAG+AGG - chr8_4:53438974-53438993 None:intergenic 40.0%
TCTGATCCTTCTTTGACACT+GGG - chr8_4:53439154-53439173 None:intergenic 40.0%
TTCTGATCCTTCTTTGACAC+TGG - chr8_4:53439155-53439174 None:intergenic 40.0%
!! ATACAGTTTTGGTAAGGGGA+GGG - chr8_4:53439585-53439604 None:intergenic 40.0%
!! TATACAGTTTTGGTAAGGGG+AGG - chr8_4:53439586-53439605 None:intergenic 40.0%
AGCAAACTCTTGACGAAGAA+TGG - chr8_4:53439706-53439725 None:intergenic 40.0%
AAGATCTGTCTGAAGAGAAC+AGG + chr8_4:53439748-53439767 Msa1333340:CDS 40.0%
! CAACACATTTGTAGCTTTGC+TGG - chr8_4:53439912-53439931 None:intergenic 40.0%
! ACAAATGTGTTGCTGCTTCT+AGG + chr8_4:53439920-53439939 Msa1333340:CDS 40.0%
GCATATGCTTTGACGTTAAC+AGG + chr8_4:53439953-53439972 Msa1333340:CDS 40.0%
GACCTGAAGACTGTCTAAAA+TGG + chr8_4:53440008-53440027 Msa1333340:CDS 40.0%
TGGATGCAGTGATGTTGATA+AGG + chr8_4:53440274-53440293 Msa1333340:intron 40.0%
! GGATGCAGTGATGTTGATAA+GGG + chr8_4:53440275-53440294 Msa1333340:intron 40.0%
TCATATTCCACATGCACAGT+AGG - chr8_4:53440311-53440330 None:intergenic 40.0%
! GCATGTGGAATATGATAACG+AGG + chr8_4:53440316-53440335 Msa1333340:CDS 40.0%
!! GAAACATTGATTCCGTCACT+TGG - chr8_4:53440365-53440384 None:intergenic 40.0%
AATGTTGCACAGTATGCGTA+TGG + chr8_4:53440467-53440486 Msa1333340:CDS 40.0%
ATGTTGCACAGTATGCGTAT+GGG + chr8_4:53440468-53440487 Msa1333340:CDS 40.0%
! GGGTCATCGAGATCAATTTT+TGG - chr8_4:53440542-53440561 None:intergenic 40.0%
GCATCAAATCGTTAGCTACA+GGG - chr8_4:53440562-53440581 None:intergenic 40.0%
TGCATCAAATCGTTAGCTAC+AGG - chr8_4:53440563-53440582 None:intergenic 40.0%
!! ATGCAGTTTTATGAGCGGAT+GGG + chr8_4:53440578-53440597 Msa1333340:CDS 40.0%
GACACACTTGCACATCAATA+CGG + chr8_4:53440602-53440621 Msa1333340:CDS 40.0%
!! GTCTTCAAAGCGGATTTTGT+AGG - chr8_4:53440784-53440803 None:intergenic 40.0%
!! ACAAAATCCGCTTTGAAGAC+GGG + chr8_4:53440784-53440803 Msa1333340:intron 40.0%
AAACCGCACAAGCAATACAA+CGG + chr8_4:53440815-53440834 Msa1333340:intron 40.0%
! TTTTAGTGTGCTTGGTTGAG+GGG - chr8_4:53440872-53440891 None:intergenic 40.0%
GTGGCCTAATAATAGACTGT+AGG + chr8_4:53440922-53440941 Msa1333340:intron 40.0%
GGCCTAATAATAGACTGTAG+GGG + chr8_4:53440924-53440943 Msa1333340:intron 40.0%
CACCCCTACAGTCTATTATT+AGG - chr8_4:53440929-53440948 None:intergenic 40.0%
CTAATAATAGACTGTAGGGG+TGG + chr8_4:53440927-53440946 Msa1333340:intron 40.0%
TCGCAGGCTAATTGTTGAAT+GGG + chr8_4:53440987-53441006 Msa1333340:intron 40.0%
! CCTGAGTCCAAATTCTAAGA+TGG - chr8_4:53441070-53441089 None:intergenic 40.0%
CCATCTTAGAATTTGGACTC+AGG + chr8_4:53441067-53441086 Msa1333340:intron 40.0%
!! CCGATTTTGAGGAGATAAGT+TGG - chr8_4:53441095-53441114 None:intergenic 40.0%
!! TATCTCACAAGCCGATTTTG+AGG - chr8_4:53441106-53441125 None:intergenic 40.0%
CTTACAAAGGCCATATCTCT+AGG + chr8_4:53441152-53441171 Msa1333340:intron 40.0%
TCCTATATCGCCTAGAGATA+TGG - chr8_4:53441165-53441184 None:intergenic 40.0%
! ATTGGTGGTATAGGATGGAA+GGG + chr8_4:53441216-53441235 Msa1333340:intron 40.0%
GCAGTGGAATGAAATGGAAT+AGG - chr8_4:53441282-53441301 None:intergenic 40.0%
TGGAATGCAGTGGAATGAAA+TGG - chr8_4:53441288-53441307 None:intergenic 40.0%
! TATCTTCGGAATGGTGGAAT+AGG - chr8_4:53441312-53441331 None:intergenic 40.0%
CCTTAAGTAATGTGAGTAGG+TGG - chr8_4:53441534-53441553 None:intergenic 40.0%
CCACCTACTCACATTACTTA+AGG + chr8_4:53441531-53441550 Msa1333340:intron 40.0%
TCAACACTCACTCCTCTATT+GGG - chr8_4:53441658-53441677 None:intergenic 40.0%
TTCAACACTCACTCCTCTAT+TGG - chr8_4:53441659-53441678 None:intergenic 40.0%
CTATGCAGATATTCTCTGCA+AGG + chr8_4:53442006-53442025 Msa1333340:intron 40.0%
AACGCTATTACAGCAATGCT+TGG + chr8_4:53442081-53442100 Msa1333340:CDS 40.0%
CTATTACAGCAATGCTTGGA+TGG + chr8_4:53442085-53442104 Msa1333340:CDS 40.0%
TCGGGCTATATCATTTCCAA+TGG + chr8_4:53442178-53442197 Msa1333340:intron 40.0%
TGCAACAATGCTAGAGGAAA+TGG - chr8_4:53442368-53442387 None:intergenic 40.0%
TGACTTTGCAACAATGCTAG+AGG - chr8_4:53442374-53442393 None:intergenic 40.0%
TCAGATCAGCACTATGATAC+AGG + chr8_4:53442565-53442584 Msa1333340:CDS 40.0%
CAGATCAGCACTATGATACA+GGG + chr8_4:53442566-53442585 Msa1333340:CDS 40.0%
CACTATGATACAGGGAGAAT+TGG + chr8_4:53442574-53442593 Msa1333340:CDS 40.0%
!! GAATTGGTGATGATGATGCA+AGG + chr8_4:53442590-53442609 Msa1333340:CDS 40.0%
TTTACTAACCTTCCTGGGAT+TGG + chr8_4:53442656-53442675 Msa1333340:intron 40.0%
!! GGATTTTTCTGTCTGGAATG+TGG + chr8_4:53442703-53442722 Msa1333340:intron 40.0%
! ATAGAAAGCATGGAAAGGGA+AGG - chr8_4:53442733-53442752 None:intergenic 40.0%
! GGTAGAGAAGCACAGAAAAA+AGG + chr8_4:53442856-53442875 Msa1333340:intron 40.0%
AGGATATTAGGAAGTGATGC+AGG + chr8_4:53442876-53442895 Msa1333340:intron 40.0%
GACGAAAAATTCTCAAACCC+AGG + chr8_4:53443158-53443177 Msa1333340:CDS 40.0%
CAACAAACAAACACAGCCAA+AGG - chr8_4:53443549-53443568 None:intergenic 40.0%
! GCTGTGTTTGTTTGTTGCAA+TGG + chr8_4:53443552-53443571 Msa1333340:intron 40.0%
AGGAAACATTACCTCTCGTA+TGG - chr8_4:53444007-53444026 None:intergenic 40.0%
!! TCCAGGATTATGGTTTGCTA+AGG + chr8_4:53444081-53444100 Msa1333340:intron 40.0%
TCCTTAGCAAACCATAATCC+TGG - chr8_4:53444085-53444104 None:intergenic 40.0%
TTACTTCTGTACTGCGTCTT+TGG + chr8_4:53444158-53444177 Msa1333340:intron 40.0%
! ATAATATAGTGCCGGACAGA+AGG - chr8_4:53444213-53444232 None:intergenic 40.0%
TTTGAAAGGCCCATTTGTAC+TGG + chr8_4:53444249-53444268 Msa1333340:intron 40.0%
GTTGTCAATGGAGAGATAGT+AGG + chr8_4:53444324-53444343 Msa1333340:CDS 40.0%
!! TTTTGCTATACCATAACGGG+AGG - chr8_4:53444399-53444418 None:intergenic 40.0%
! ATTCTCTCTGGTGCCAATAT+TGG + chr8_4:53444733-53444752 Msa1333340:intron 40.0%
AGACTCTCATACAACTTGTG+TGG - chr8_4:53444842-53444861 None:intergenic 40.0%
!!! TGTGTAGTGCTTTTAAGACC+TGG + chr8_4:53444888-53444907 Msa1333340:intron 40.0%
CTATCTAACATTCTCAGGAG+AGG + chr8_4:53445398-53445417 Msa1333340:intron 40.0%
TAGGATACCTCAGATTCAGT+TGG - chr8_4:53445427-53445446 None:intergenic 40.0%
!! ACCCATTCAACGAAAGTATC+AGG - chr8_4:53445484-53445503 None:intergenic 40.0%
TTCGTTGAATGGGTGACTTA+TGG + chr8_4:53445490-53445509 Msa1333340:CDS 40.0%
!!! ATTGACTTGGCTTTGGCTTT+TGG + chr8_4:53445582-53445601 Msa1333340:three_prime_UTR 40.0%
AGCGCGTAAAGGAAATAAAC+AGG + chr8_4:53445651-53445670 Msa1333340:three_prime_UTR 40.0%
! CTATTTTGCACTATGCTCAC+AGG - chr8_4:53445781-53445800 None:intergenic 40.0%
AAAGGTTTGGAAGGAACCAC+GGG - chr8_4:53435582-53435601 None:intergenic 45.0%
CGAAGAAGAAGGATTGGGTT+TGG - chr8_4:53435620-53435639 None:intergenic 45.0%
GAGGAGAAGATCGAAGAAGA+AGG - chr8_4:53435631-53435650 None:intergenic 45.0%
ATTGAACGGGACAAGATACG+AGG - chr8_4:53435650-53435669 None:intergenic 45.0%
!! AGGGTTGGGTTGAATTGAAC+GGG - chr8_4:53435663-53435682 None:intergenic 45.0%
TCTTAAGCATGAAGAGAGGC+TGG - chr8_4:53436805-53436824 None:intergenic 45.0%
ACAAGAGTAGGACTTACTGG+AGG + chr8_4:53437046-53437065 Msa1333340:CDS 45.0%
CAAGAGTAGGACTTACTGGA+GGG + chr8_4:53437047-53437066 Msa1333340:CDS 45.0%
!! GGAGGGTACTTAAGATTGAC+CGG + chr8_4:53437064-53437083 Msa1333340:CDS 45.0%
!! TTAGCTCTGAAGGATCTAGC+CGG - chr8_4:53437086-53437105 None:intergenic 45.0%
!!! TCTTTTGAGGCGGATACATG+AGG + chr8_4:53437152-53437171 Msa1333340:CDS 45.0%
!!! CTTTTGAGGCGGATACATGA+GGG + chr8_4:53437153-53437172 Msa1333340:CDS 45.0%
!!! TTTTGAGGCGGATACATGAG+GGG + chr8_4:53437154-53437173 Msa1333340:CDS 45.0%
TGTCGACATGCAATGGAAGA+AGG - chr8_4:53437250-53437269 None:intergenic 45.0%
AGGCAAATTGGTGCAATCTG+CGG + chr8_4:53437369-53437388 Msa1333340:CDS 45.0%
ATGCACAGTTGACCTTACGA+AGG + chr8_4:53437590-53437609 Msa1333340:CDS 45.0%
AACATGTGTGACACTGAGAC+AGG + chr8_4:53437660-53437679 Msa1333340:CDS 45.0%
ACATGGTCTCGTAAAGGACA+TGG - chr8_4:53437686-53437705 None:intergenic 45.0%
CACACTTGAGATATCTGGAC+GGG + chr8_4:53437939-53437958 Msa1333340:CDS 45.0%
AGAAGATCACGCCATTATGC+TGG + chr8_4:53437985-53438004 Msa1333340:CDS 45.0%
CAAACCTAGTGCCAGCATAA+TGG - chr8_4:53437999-53438018 None:intergenic 45.0%
CGATTGACAATTTCGGAAGG+GGG - chr8_4:53438285-53438304 None:intergenic 45.0%
TCAATTACCCCTCTGTGATG+TGG - chr8_4:53438384-53438403 None:intergenic 45.0%
AAAGTCATGCCACGTCACAA+GGG - chr8_4:53438594-53438613 None:intergenic 45.0%
AAAAGTCATGCCACGTCACA+AGG - chr8_4:53438595-53438614 None:intergenic 45.0%
! AGGCGAGGTGTTAATGAGAA+GGG + chr8_4:53438845-53438864 Msa1333340:CDS 45.0%
! GTCTTTGAGGATGTTCCAGA+AGG + chr8_4:53438902-53438921 Msa1333340:CDS 45.0%
AGCTCTATCATCCAGAATCG+TGG + chr8_4:53438941-53438960 Msa1333340:CDS 45.0%
GTGGCTCAATCCCTCTTTAT+TGG + chr8_4:53438960-53438979 Msa1333340:CDS 45.0%
TTCTTCCCCAGTGTCAAAGA+AGG + chr8_4:53439145-53439164 Msa1333340:intron 45.0%
CTGATCCTTCTTTGACACTG+GGG - chr8_4:53439153-53439172 None:intergenic 45.0%
TTCACGAGGCTTCTTCTCAT+GGG - chr8_4:53439682-53439701 None:intergenic 45.0%
TGTCTGAAGAGAACAGGCTT+AGG + chr8_4:53439754-53439773 Msa1333340:CDS 45.0%
GTTTGTGAAGATCCCAGTGA+AGG - chr8_4:53439782-53439801 None:intergenic 45.0%
TAGACAGTCTTCAGGTCTCA+AGG - chr8_4:53440005-53440024 None:intergenic 45.0%
!! GGCCATTTTAGACAGTCTTC+AGG - chr8_4:53440013-53440032 None:intergenic 45.0%
CGGTTAATGCTTGACCAACA+AGG + chr8_4:53440200-53440219 Msa1333340:intron 45.0%
CAGGGATCAAGAAATGTCAG+TGG - chr8_4:53440243-53440262 None:intergenic 45.0%
! CTTTTCACCTACTGTGCATG+TGG + chr8_4:53440301-53440320 Msa1333340:CDS 45.0%
ATCATTCTACCAAACCACCC+AGG + chr8_4:53440393-53440412 Msa1333340:CDS 45.0%
! ATTTTGCAACCTGGGTGGTT+TGG - chr8_4:53440405-53440424 None:intergenic 45.0%
AAACCACCCAGGTTGCAAAA+TGG + chr8_4:53440404-53440423 Msa1333340:CDS 45.0%
AACCACCCAGGTTGCAAAAT+GGG + chr8_4:53440405-53440424 Msa1333340:CDS 45.0%
ATCCAAGCAGTCTATGCAGT+TGG - chr8_4:53440441-53440460 None:intergenic 45.0%
ACTGCATAGACTGCTTGGAT+CGG + chr8_4:53440441-53440460 Msa1333340:CDS 45.0%
TAATTCCCAGAGAGTGAAGC+TGG - chr8_4:53440511-53440530 None:intergenic 45.0%
!! GATGCAGTTTTATGAGCGGA+TGG + chr8_4:53440577-53440596 Msa1333340:CDS 45.0%
ACACTTGCACATCAATACGG+TGG + chr8_4:53440605-53440624 Msa1333340:CDS 45.0%
!! CAAAATCCGCTTTGAAGACG+GGG + chr8_4:53440785-53440804 Msa1333340:intron 45.0%
TAGCCGTTGTATTGCTTGTG+CGG - chr8_4:53440821-53440840 None:intergenic 45.0%
TTTAGTGTGCTTGGTTGAGG+GGG - chr8_4:53440871-53440890 None:intergenic 45.0%
TGCTCAACTGCAATTAGGGT+AGG + chr8_4:53440895-53440914 Msa1333340:intron 45.0%
TGCAATTAGGGTAGGCAAAG+TGG + chr8_4:53440903-53440922 Msa1333340:intron 45.0%
CTCGCAGGCTAATTGTTGAA+TGG + chr8_4:53440986-53441005 Msa1333340:intron 45.0%
! GGCTAATTGTTGAATGGGCT+TGG + chr8_4:53440992-53441011 Msa1333340:intron 45.0%
! TTGAATGGGCTTGGAGTTTG+TGG + chr8_4:53441001-53441020 Msa1333340:intron 45.0%
CACGAAGATAGCCTAACAAC+TGG + chr8_4:53441025-53441044 Msa1333340:intron 45.0%
GCCATATCTCTAGGCGATAT+AGG + chr8_4:53441161-53441180 Msa1333340:intron 45.0%
!! ACCAATGAGCTGGGTTGATA+GGG - chr8_4:53441202-53441221 None:intergenic 45.0%
TCCTATACCACCAATGAGCT+GGG - chr8_4:53441211-53441230 None:intergenic 45.0%
ATCCTATACCACCAATGAGC+TGG - chr8_4:53441212-53441231 None:intergenic 45.0%
! AGCTCATTGGTGGTATAGGA+TGG + chr8_4:53441211-53441230 Msa1333340:intron 45.0%
! CATTGGTGGTATAGGATGGA+AGG + chr8_4:53441215-53441234 Msa1333340:intron 45.0%
TGGAATAGGATGGAATGCAG+TGG - chr8_4:53441298-53441317 None:intergenic 45.0%
! TTCGGAATGGTGGAATAGGA+TGG - chr8_4:53441308-53441327 None:intergenic 45.0%
CAATGGTATCTTCGGAATGG+TGG - chr8_4:53441318-53441337 None:intergenic 45.0%
CTGCAATGGTATCTTCGGAA+TGG - chr8_4:53441321-53441340 None:intergenic 45.0%
CACACGAGTGGCCATAATTA+AGG + chr8_4:53441373-53441392 Msa1333340:intron 45.0%
ACGAGTGGCCATAATTAAGG+TGG + chr8_4:53441376-53441395 Msa1333340:intron 45.0%
TCAATTTGGGTCCTACGCTT+TGG - chr8_4:53441630-53441649 None:intergenic 45.0%
GCTCGGACAACATAACTAGA+CGG - chr8_4:53441728-53441747 None:intergenic 45.0%
TCTAGTTATGTTGTCCGAGC+TGG + chr8_4:53441728-53441747 Msa1333340:intron 45.0%
TTATGTTGTCCGAGCTGGAT+GGG + chr8_4:53441733-53441752 Msa1333340:intron 45.0%
TGCAGATATTCTCTGCAAGG+AGG + chr8_4:53442009-53442028 Msa1333340:intron 45.0%
GCAGATATTCTCTGCAAGGA+GGG + chr8_4:53442010-53442029 Msa1333340:intron 45.0%
CAGATATTCTCTGCAAGGAG+GGG + chr8_4:53442011-53442030 Msa1333340:intron 45.0%
CAATGCTAGAGGAAATGGAC+TGG - chr8_4:53442363-53442382 None:intergenic 45.0%
! GTATCGATGCCTGTCTTTAC+TGG + chr8_4:53442446-53442465 Msa1333340:intron 45.0%
CTGCCCCAAATGAAACAGAA+AGG - chr8_4:53442490-53442509 None:intergenic 45.0%
! TTTCATTTGGGGCAGATTCC+TGG + chr8_4:53442495-53442514 Msa1333340:intron 45.0%
! TTCATTTGGGGCAGATTCCT+GGG + chr8_4:53442496-53442515 Msa1333340:intron 45.0%
AACAGGATAAGCCTGCTCTA+TGG + chr8_4:53442533-53442552 Msa1333340:CDS 45.0%
ACAGGATAAGCCTGCTCTAT+GGG + chr8_4:53442534-53442553 Msa1333340:CDS 45.0%
TTCAACCATTCACCAATCCC+AGG - chr8_4:53442671-53442690 None:intergenic 45.0%
CTGATCGATCTGGTAAACCT+GGG - chr8_4:53443178-53443197 None:intergenic 45.0%
TTACCAGATCGATCAGGAGA+AGG + chr8_4:53443182-53443201 Msa1333340:CDS 45.0%
TACCAGATCGATCAGGAGAA+GGG + chr8_4:53443183-53443202 Msa1333340:CDS 45.0%
TTCAGGTGACGACTCACAAA+AGG - chr8_4:53443216-53443235 None:intergenic 45.0%
CACAAAGTTAGAGCAGCTGA+AGG - chr8_4:53443939-53443958 None:intergenic 45.0%
CTTCAGCTGCTCTAACTTTG+TGG + chr8_4:53443937-53443956 Msa1333340:CDS 45.0%
CTAACTTTGTGGACCTGGAT+TGG + chr8_4:53443948-53443967 Msa1333340:CDS 45.0%
GTGAAGAAGATCCATACGAG+AGG + chr8_4:53443993-53444012 Msa1333340:CDS 45.0%
ACTTGTGCAATTGCTTCGTC+AGG - chr8_4:53444027-53444046 None:intergenic 45.0%
GACCTGCATCCAGTACAAAT+GGG - chr8_4:53444261-53444280 None:intergenic 45.0%
TGACCTGCATCCAGTACAAA+TGG - chr8_4:53444262-53444281 None:intergenic 45.0%
TCAATTACCAACTCCCCAGT+TGG + chr8_4:53444282-53444301 Msa1333340:CDS 45.0%
TAACGGAGTCTAGCCGTATA+AGG + chr8_4:53444576-53444595 Msa1333340:intron 45.0%
GAATCAAACCTGAGACCTTG+AGG - chr8_4:53444717-53444736 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCTC+TGG + chr8_4:53444721-53444740 Msa1333340:intron 45.0%
! TCTCTGGTGCCAATATTGGT+GGG + chr8_4:53444737-53444756 Msa1333340:intron 45.0%
TGGCTGACTAAGCTAAGTTC+AGG - chr8_4:53445078-53445097 None:intergenic 45.0%
AGGTATCCTACAGTGAAGCA+CGG + chr8_4:53445437-53445456 Msa1333340:CDS 45.0%
GCATGTCAGCATTACCAGAA+TGG - chr8_4:53445724-53445743 None:intergenic 45.0%
!! ATTAAATTCAAAATTATAAT+GGG - chr8_4:53439230-53439249 None:intergenic 5.0%
!! TATTAAATTCAAAATTATAA+TGG - chr8_4:53439231-53439250 None:intergenic 5.0%
!!! TATAATTTTGAATTTAATAA+AGG + chr8_4:53439232-53439251 Msa1333340:CDS 5.0%
AGATCGAAAATTCGGAGCCC+CGG - chr8_4:53435786-53435805 None:intergenic 50.0%
TGATAGGGAGGGACAAGAGT+AGG + chr8_4:53437034-53437053 Msa1333340:CDS 50.0%
GGGACAAGAGTAGGACTTAC+TGG + chr8_4:53437043-53437062 Msa1333340:CDS 50.0%
CGAACAGAAGAATTCGGCAG+CGG - chr8_4:53437432-53437451 None:intergenic 50.0%
CGCTGCCGAATTCTTCTGTT+CGG + chr8_4:53437430-53437449 Msa1333340:CDS 50.0%
GGATGGAGGAAACTATCGGA+GGG - chr8_4:53438319-53438338 None:intergenic 50.0%
TGGATGGAGGAAACTATCGG+AGG - chr8_4:53438320-53438339 None:intergenic 50.0%
!! GAGGGGGGTATTTGCACATA+TGG - chr8_4:53438468-53438487 None:intergenic 50.0%
TCATTTACCCCCTTGTGACG+TGG + chr8_4:53438582-53438601 Msa1333340:intron 50.0%
AAGTCATGCCACGTCACAAG+GGG - chr8_4:53438593-53438612 None:intergenic 50.0%
GTGGTCGTTAACTGCCTATG+TGG - chr8_4:53438622-53438641 None:intergenic 50.0%
GACCACGCCAACATGTTAGA+CGG + chr8_4:53438636-53438655 Msa1333340:intron 50.0%
ACCACGCCAACATGTTAGAC+GGG + chr8_4:53438637-53438656 Msa1333340:intron 50.0%
! GTGTGTAGGTATTTGAGGCG+AGG + chr8_4:53438830-53438849 Msa1333340:intron 50.0%
! GAGGCGAGGTGTTAATGAGA+AGG + chr8_4:53438844-53438863 Msa1333340:CDS 50.0%
TGGTAAGGGGAGGGAGAAAA+TGG - chr8_4:53439576-53439595 None:intergenic 50.0%
CTTCACGAGGCTTCTTCTCA+TGG - chr8_4:53439683-53439702 None:intergenic 50.0%
TGACGAAGAATGGCTTCACG+AGG - chr8_4:53439696-53439715 None:intergenic 50.0%
ACAGGCTTAGGTTCCTTCAC+TGG + chr8_4:53439766-53439785 Msa1333340:CDS 50.0%
CAGGCTTAGGTTCCTTCACT+GGG + chr8_4:53439767-53439786 Msa1333340:CDS 50.0%
! GTTGCTGCTTCTAGGCAAAG+TGG + chr8_4:53439928-53439947 Msa1333340:CDS 50.0%
ACCACCCAGGTTGCAAAATG+GGG + chr8_4:53440406-53440425 Msa1333340:CDS 50.0%
! AGCACCCCATTTTGCAACCT+GGG - chr8_4:53440413-53440432 None:intergenic 50.0%
GACCAACTGCATAGACTGCT+TGG + chr8_4:53440436-53440455 Msa1333340:CDS 50.0%
TGCACAGTATGCGTATGGGT+TGG + chr8_4:53440472-53440491 Msa1333340:CDS 50.0%
! TGGTTCTGCTGCACACAACA+AGG + chr8_4:53440625-53440644 Msa1333340:CDS 50.0%
AGCATTCCCCGTCTTCAAAG+CGG - chr8_4:53440794-53440813 None:intergenic 50.0%
! CAACAATTAGCCTGCGAGTG+AGG - chr8_4:53440984-53441003 None:intergenic 50.0%
TCCCTATCAACCCAGCTCAT+TGG + chr8_4:53441198-53441217 Msa1333340:intron 50.0%
!! CACCAATGAGCTGGGTTGAT+AGG - chr8_4:53441203-53441222 None:intergenic 50.0%
CTATCAACCCAGCTCATTGG+TGG + chr8_4:53441201-53441220 Msa1333340:intron 50.0%
! ACCCAGCTCATTGGTGGTAT+AGG + chr8_4:53441207-53441226 Msa1333340:intron 50.0%
GGGACTCATTTCCAAAGCGT+AGG + chr8_4:53441616-53441635 Msa1333340:intron 50.0%
GTTATGTTGTCCGAGCTGGA+TGG + chr8_4:53441732-53441751 Msa1333340:intron 50.0%
! TCATTTGGGGCAGATTCCTG+GGG + chr8_4:53442497-53442516 Msa1333340:intron 50.0%
AGAGCAGGCTTATCCTGTTG+TGG - chr8_4:53442532-53442551 None:intergenic 50.0%
TAAGCCTGCTCTATGGGAGT+TGG + chr8_4:53442540-53442559 Msa1333340:CDS 50.0%
AAGCCTGCTCTATGGGAGTT+GGG + chr8_4:53442541-53442560 Msa1333340:CDS 50.0%
! ACCTTCCTGGGATTGGTGAA+TGG + chr8_4:53442663-53442682 Msa1333340:intron 50.0%
ACCATTCACCAATCCCAGGA+AGG - chr8_4:53442667-53442686 None:intergenic 50.0%
! GAAAGCATGGAAAGGGAAGG+TGG - chr8_4:53442730-53442749 None:intergenic 50.0%
TCCTTGAGCCTGTGTATGCA+TGG + chr8_4:53443006-53443025 Msa1333340:intron 50.0%
CCTTGAGCCTGTGTATGCAT+GGG + chr8_4:53443007-53443026 Msa1333340:intron 50.0%
! TAACCATTAGCTGCATCGGC+AGG - chr8_4:53443038-53443057 None:intergenic 50.0%
! TTGGCATTTGGAGCTGGCAT+AGG - chr8_4:53443137-53443156 None:intergenic 50.0%
TATGCCAGCTCCAAATGCCA+AGG + chr8_4:53443136-53443155 Msa1333340:CDS 50.0%
CCTGATCGATCTGGTAAACC+TGG - chr8_4:53443179-53443198 None:intergenic 50.0%
CCAGGTTTACCAGATCGATC+AGG + chr8_4:53443176-53443195 Msa1333340:CDS 50.0%
TCCACAAAAAGCTGTCTCCG+AGG - chr8_4:53443857-53443876 None:intergenic 50.0%
CTGCTCTAACTTTGTGGACC+TGG + chr8_4:53443943-53443962 Msa1333340:CDS 50.0%
CTGACGAAGATAGCCAATCC+AGG - chr8_4:53443964-53443983 None:intergenic 50.0%
CTTCTGTACTGCGTCTTTGG+CGG + chr8_4:53444161-53444180 Msa1333340:intron 50.0%
ATTACCAACTCCCCAGTTGG+CGG + chr8_4:53444285-53444304 Msa1333340:CDS 50.0%
AGCTGCCTCCACTAGTGATT+GGG + chr8_4:53444353-53444372 Msa1333340:CDS 50.0%
TCAAACCTGAGACCTTGAGG+AGG - chr8_4:53444714-53444733 None:intergenic 50.0%
! CTCTCTGGTGCCAATATTGG+TGG + chr8_4:53444736-53444755 Msa1333340:intron 50.0%
ATACTGTAGTGCGGCTTGCA+CGG - chr8_4:53444800-53444819 None:intergenic 50.0%
TTGTGAGGTGAGAACTGTCC+AGG - chr8_4:53444909-53444928 None:intergenic 50.0%
CATGAGGGGAACAAAGCCAC+TGG + chr8_4:53437168-53437187 Msa1333340:CDS 55.0%
CACGCCATTATGCTGGCACT+AGG + chr8_4:53437992-53438011 Msa1333340:CDS 55.0%
CAGGTCGTCATGTTGGATGG+AGG - chr8_4:53438333-53438352 None:intergenic 55.0%
CTCCATCCAACATGACGACC+TGG + chr8_4:53438331-53438350 Msa1333340:intron 55.0%
TGCCAGGTCGTCATGTTGGA+TGG - chr8_4:53438336-53438355 None:intergenic 55.0%
AGTCATGCCACGTCACAAGG+GGG - chr8_4:53438592-53438611 None:intergenic 55.0%
CCACGCCAACATGTTAGACG+GGG + chr8_4:53438638-53438657 Msa1333340:intron 55.0%
CACGCCAACATGTTAGACGG+GGG + chr8_4:53438639-53438658 Msa1333340:intron 55.0%
ACGCCAACATGTTAGACGGG+GGG + chr8_4:53438640-53438659 Msa1333340:intron 55.0%
GAGGGATTGAGCCACGATTC+TGG - chr8_4:53438955-53438974 None:intergenic 55.0%
! ACCCCATTTTGCAACCTGGG+TGG - chr8_4:53440410-53440429 None:intergenic 55.0%
! GAGCACCCCATTTTGCAACC+TGG - chr8_4:53440414-53440433 None:intergenic 55.0%
! GGTTGCAAAATGGGGTGCTC+AGG + chr8_4:53440414-53440433 Msa1333340:CDS 55.0%
!! GCGTATGGGTTGGCTGCTAT+TGG + chr8_4:53440482-53440501 Msa1333340:CDS 55.0%
TTCCCAGAGAGTGAAGCTGG+TGG - chr8_4:53440508-53440527 None:intergenic 55.0%
AGGGGTGGCCGCAATTAAGA+TGG + chr8_4:53440942-53440961 Msa1333340:intron 55.0%
CTGCGAGTGAGGATGTGTGT+TGG - chr8_4:53440973-53440992 None:intergenic 55.0%
CAACACACATCCTCACTCGC+AGG + chr8_4:53440971-53440990 Msa1333340:intron 55.0%
CCATTGTGTCCCATCCAGCT+CGG - chr8_4:53441745-53441764 None:intergenic 55.0%
ACTGTGTTGCAGCTCTCCAC+TGG - chr8_4:53442037-53442056 None:intergenic 55.0%
GAGAGCTGCAACACAGTCTC+AGG + chr8_4:53442040-53442059 Msa1333340:CDS 55.0%
GTTGTGGCTGAAAATGCCCC+AGG - chr8_4:53442516-53442535 None:intergenic 55.0%
!! GGGGCATTTTCAGCCACAAC+AGG + chr8_4:53442516-53442535 Msa1333340:CDS 55.0%
GAACCCAACTCCCATAGAGC+AGG - chr8_4:53442547-53442566 None:intergenic 55.0%
CCCATGCATACACAGGCTCA+AGG - chr8_4:53443010-53443029 None:intergenic 55.0%
GGCGTTTCCCATGCATACAC+AGG - chr8_4:53443017-53443036 None:intergenic 55.0%
! TCGTCCTTGGCATTTGGAGC+TGG - chr8_4:53443143-53443162 None:intergenic 55.0%
CTCCCTTCTCCTGATCGATC+TGG - chr8_4:53443188-53443207 None:intergenic 55.0%
TCGATCAGGAGAAGGGAGCA+AGG + chr8_4:53443190-53443209 Msa1333340:CDS 55.0%
GATACACCCCCTCAATGCCT+CGG + chr8_4:53443837-53443856 Msa1333340:intron 55.0%
!! AGCTGTCTCCGAGGCATTGA+GGG - chr8_4:53443848-53443867 None:intergenic 55.0%
!! AAGCTGTCTCCGAGGCATTG+AGG - chr8_4:53443849-53443868 None:intergenic 55.0%
! GCCTCGGAGACAGCTTTTTG+TGG + chr8_4:53443853-53443872 Msa1333340:CDS 55.0%
GGCCCATTTGTACTGGATGC+AGG + chr8_4:53444256-53444275 Msa1333340:intron 55.0%
TTACCAACTCCCCAGTTGGC+GGG + chr8_4:53444286-53444305 Msa1333340:CDS 55.0%
TGATGAAAGCCCGCCAACTG+GGG - chr8_4:53444298-53444317 None:intergenic 55.0%
CTGATGAAAGCCCGCCAACT+GGG - chr8_4:53444299-53444318 None:intergenic 55.0%
TCTGATGAAAGCCCGCCAAC+TGG - chr8_4:53444300-53444319 None:intergenic 55.0%
CAGCTGCCTCCACTAGTGAT+TGG + chr8_4:53444352-53444371 Msa1333340:CDS 55.0%
GCTGCCTCCACTAGTGATTG+GGG + chr8_4:53444354-53444373 Msa1333340:CDS 55.0%
!! CCATAACGGGAGGTACCTTC+AGG - chr8_4:53444389-53444408 None:intergenic 55.0%
!! CCTGAAGGTACCTCCCGTTA+TGG + chr8_4:53444386-53444405 Msa1333340:intron 55.0%
!! GTGGTGTTGGCTTGGGATCT+TGG + chr8_4:53444680-53444699 Msa1333340:intron 55.0%
TTGGAGTGTGCTCCTCCTCA+AGG + chr8_4:53444699-53444718 Msa1333340:intron 55.0%
TACTGTAGTGCGGCTTGCAC+GGG - chr8_4:53444799-53444818 None:intergenic 55.0%
GAGGGAGCCAACTGAATCTG+AGG + chr8_4:53445417-53445436 Msa1333340:CDS 55.0%
GTTGGACCGTGCTTCACTGT+AGG - chr8_4:53445446-53445465 None:intergenic 55.0%
CGAAAATTCGGAGCCCCGGA+AGG - chr8_4:53435782-53435801 None:intergenic 60.0%
TCCCTTGAGCCACCAGAGAG+AGG + chr8_4:53436032-53436051 Msa1333340:five_prime_UTR 60.0%
CCCTCTCTCTGGTGGCTCAA+GGG - chr8_4:53436036-53436055 None:intergenic 60.0%
CCCTTGAGCCACCAGAGAGA+GGG + chr8_4:53436033-53436052 Msa1333340:five_prime_UTR 60.0%
TCCCTCTCTCTGGTGGCTCA+AGG - chr8_4:53436037-53436056 None:intergenic 60.0%
TTGAGCCACCAGAGAGAGGG+AGG + chr8_4:53436036-53436055 Msa1333340:five_prime_UTR 60.0%
GAGGGGAACAAAGCCACTGG+TGG + chr8_4:53437171-53437190 Msa1333340:CDS 60.0%
GCAGTGCCAGGTCGTCATGT+TGG - chr8_4:53438340-53438359 None:intergenic 60.0%
CCCCGTCTAACATGTTGGCG+TGG - chr8_4:53438641-53438660 None:intergenic 60.0%
CGCCAACATGTTAGACGGGG+GGG + chr8_4:53438641-53438660 Msa1333340:intron 60.0%
GCCAACATGTTAGACGGGGG+GGG + chr8_4:53438642-53438661 Msa1333340:intron 60.0%
CCAACATGTTAGACGGGGGG+GGG + chr8_4:53438643-53438662 Msa1333340:intron 60.0%
CAACATGTTAGACGGGGGGG+GGG + chr8_4:53438644-53438663 Msa1333340:intron 60.0%
AACATGTTAGACGGGGGGGG+GGG + chr8_4:53438645-53438664 Msa1333340:intron 60.0%
TGGCCACCAGCTTCACTCTC+TGG + chr8_4:53440502-53440521 Msa1333340:CDS 60.0%
GGCCACCAGCTTCACTCTCT+GGG + chr8_4:53440503-53440522 Msa1333340:CDS 60.0%
AGTGTGCTTGGTTGAGGGGG+TGG - chr8_4:53440868-53440887 None:intergenic 60.0%
CCGAGCTGGATGGGACACAA+TGG + chr8_4:53441742-53441761 Msa1333340:intron 60.0%
ACGCCTGCCGATGCAGCTAA+TGG + chr8_4:53443032-53443051 Msa1333340:intron 60.0%
!! CTGTCTCCGAGGCATTGAGG+GGG - chr8_4:53443846-53443865 None:intergenic 60.0%
!! GCTGTCTCCGAGGCATTGAG+GGG - chr8_4:53443847-53443866 None:intergenic 60.0%
GCTGCCCCAATCACTAGTGG+AGG - chr8_4:53444361-53444380 None:intergenic 60.0%
! GGTGCTGCCCCAATCACTAG+TGG - chr8_4:53444364-53444383 None:intergenic 60.0%
!! AACGGGAGGTACCTTCAGGC+TGG - chr8_4:53444385-53444404 None:intergenic 60.0%
ATGCGACCCGTGAACCCACT+TGG + chr8_4:53444648-53444667 Msa1333340:intron 60.0%
TGCGACCCGTGAACCCACTT+GGG + chr8_4:53444649-53444668 Msa1333340:intron 60.0%
ACCCGTGAACCCACTTGGGT+TGG + chr8_4:53444653-53444672 Msa1333340:intron 60.0%
! GCCAACCCAAGTGGGTTCAC+GGG - chr8_4:53444657-53444676 None:intergenic 60.0%
! GGCCAACCCAAGTGGGTTCA+CGG - chr8_4:53444658-53444677 None:intergenic 60.0%
!! TGAACCCACTTGGGTTGGCC+TGG + chr8_4:53444658-53444677 Msa1333340:intron 60.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8_4:53444665-53444684 None:intergenic 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr8_4:53444667-53444686 Msa1333340:intron 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG + chr8_4:53444672-53444691 Msa1333340:intron 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG + chr8_4:53444673-53444692 Msa1333340:intron 60.0%
GATCCCAAGCCAACACCACC+AGG - chr8_4:53444679-53444698 None:intergenic 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + chr8_4:53444706-53444725 Msa1333340:intron 60.0%
CCACCAGAGAGAGGGAGGCT+CGG + chr8_4:53436041-53436060 Msa1333340:five_prime_UTR 65.0%
CACCAGAGAGAGGGAGGCTC+GGG + chr8_4:53436042-53436061 Msa1333340:five_prime_UTR 65.0%
ACCAGAGAGAGGGAGGCTCG+GGG + chr8_4:53436043-53436062 Msa1333340:five_prime_UTR 65.0%
GACGACCTGGCACTGCCATG+CGG + chr8_4:53438344-53438363 Msa1333340:intron 65.0%
TCTGACCGCATGGCAGTGCC+AGG - chr8_4:53438352-53438371 None:intergenic 65.0%
CCCCCCCCCGTCTAACATGT+TGG - chr8_4:53438646-53438665 None:intergenic 65.0%
ACATGTTAGACGGGGGGGGG+GGG + chr8_4:53438646-53438665 Msa1333340:intron 65.0%
TCTCTGCAAGGAGGGGCCAG+TGG + chr8_4:53442018-53442037 Msa1333340:CDS 65.0%
AAGCCCGCCAACTGGGGAGT+TGG - chr8_4:53444292-53444311 None:intergenic 65.0%
TTGGGGCAGCACCAGCCTGA+AGG + chr8_4:53444371-53444390 Msa1333340:CDS 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8_4:53444661-53444680 Msa1333340:intron 65.0%
CACCACCAGGCCAACCCAAG+TGG - chr8_4:53444666-53444685 None:intergenic 65.0%
CCGAGCCTCCCTCTCTCTGG+TGG - chr8_4:53436044-53436063 None:intergenic 70.0%
CCAGAGAGAGGGAGGCTCGG+GGG + chr8_4:53436044-53436063 Msa1333340:five_prime_UTR 70.0%
CATGTTAGACGGGGGGGGGG+GGG + chr8_4:53438647-53438666 Msa1333340:intron 70.0%
ATGTTAGACGGGGGGGGGGG+GGG + chr8_4:53438648-53438667 Msa1333340:intron 70.0%
CCCCCGAGCCTCCCTCTCTC+TGG - chr8_4:53436047-53436066 None:intergenic 75.0%
TGTTAGACGGGGGGGGGGGG+GGG + chr8_4:53438649-53438668 Msa1333340:intron 75.0%
! GTTAGACGGGGGGGGGGGGG+GGG + chr8_4:53438650-53438669 Msa1333340:intron 80.0%
! TTAGACGGGGGGGGGGGGGG+GGG + chr8_4:53438651-53438670 Msa1333340:intron 80.0%
! TAGACGGGGGGGGGGGGGGG+GGG + chr8_4:53438652-53438671 Msa1333340:intron 85.0%
! AGACGGGGGGGGGGGGGGGG+GGG + chr8_4:53438653-53438672 Msa1333340:intron 90.0%
! GACGGGGGGGGGGGGGGGGG+GGG + chr8_4:53438654-53438673 Msa1333340:intron 95.0%
! ACGGGGGGGGGGGGGGGGGG+GGG + chr8_4:53438655-53438674 Msa1333340:intron 95.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53435558 53446039 53435558 ID=Msa1333340;Name=Msa1333340
chr8_4 mRNA 53435558 53446039 53435558 ID=Msa1333340-mRNA-1;Parent=Msa1333340;Name=Msa1333340-mRNA-1;_AED=0.06;_eAED=0.06;_QI=555|0.87|0.94|0.94|1|1|17|508|861
chr8_4 exon 53435558 53436217 53435558 ID=Msa1333340-mRNA-1:exon:16342;Parent=Msa1333340-mRNA-1
chr8_4 exon 53436444 53436509 53436444 ID=Msa1333340-mRNA-1:exon:16343;Parent=Msa1333340-mRNA-1
chr8_4 exon 53437024 53437228 53437024 ID=Msa1333340-mRNA-1:exon:16344;Parent=Msa1333340-mRNA-1
chr8_4 exon 53437319 53437484 53437319 ID=Msa1333340-mRNA-1:exon:16345;Parent=Msa1333340-mRNA-1
chr8_4 exon 53437575 53437797 53437575 ID=Msa1333340-mRNA-1:exon:16346;Parent=Msa1333340-mRNA-1
chr8_4 exon 53437937 53438013 53437937 ID=Msa1333340-mRNA-1:exon:16347;Parent=Msa1333340-mRNA-1
chr8_4 exon 53438838 53439025 53438838 ID=Msa1333340-mRNA-1:exon:16348;Parent=Msa1333340-mRNA-1
chr8_4 exon 53439156 53439253 53439156 ID=Msa1333340-mRNA-1:exon:16349;Parent=Msa1333340-mRNA-1
chr8_4 exon 53439678 53439811 53439678 ID=Msa1333340-mRNA-1:exon:16350;Parent=Msa1333340-mRNA-1
chr8_4 exon 53439913 53440041 53439913 ID=Msa1333340-mRNA-1:exon:16351;Parent=Msa1333340-mRNA-1
chr8_4 exon 53440283 53440646 53440283 ID=Msa1333340-mRNA-1:exon:16352;Parent=Msa1333340-mRNA-1
chr8_4 exon 53442014 53442135 53442014 ID=Msa1333340-mRNA-1:exon:16353;Parent=Msa1333340-mRNA-1
chr8_4 exon 53442510 53442611 53442510 ID=Msa1333340-mRNA-1:exon:16354;Parent=Msa1333340-mRNA-1
chr8_4 exon 53443079 53443276 53443079 ID=Msa1333340-mRNA-1:exon:16355;Parent=Msa1333340-mRNA-1
chr8_4 exon 53443838 53444014 53443838 ID=Msa1333340-mRNA-1:exon:16356;Parent=Msa1333340-mRNA-1
chr8_4 exon 53444278 53444392 53444278 ID=Msa1333340-mRNA-1:exon:16357;Parent=Msa1333340-mRNA-1
chr8_4 exon 53445415 53446039 53445415 ID=Msa1333340-mRNA-1:exon:16358;Parent=Msa1333340-mRNA-1
chr8_4 five_prime_UTR 53435558 53436112 53435558 ID=Msa1333340-mRNA-1:five_prime_utr;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53436113 53436217 53436113 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53436444 53436509 53436444 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53437024 53437228 53437024 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53437319 53437484 53437319 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53437575 53437797 53437575 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53437937 53438013 53437937 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53438838 53439025 53438838 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53439156 53439253 53439156 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53439678 53439811 53439678 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53439913 53440041 53439913 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53440283 53440646 53440283 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53442014 53442135 53442014 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53442510 53442611 53442510 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53443079 53443276 53443079 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53443838 53444014 53443838 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53444278 53444392 53444278 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 CDS 53445415 53445531 53445415 ID=Msa1333340-mRNA-1:cds;Parent=Msa1333340-mRNA-1
chr8_4 three_prime_UTR 53445532 53446039 53445532 ID=Msa1333340-mRNA-1:three_prime_utr;Parent=Msa1333340-mRNA-1
Gene Sequence

>Msa1333340

ATGGCTTCTTCAGACAATTTTGAACCTTCTTCTCTCTCTCATCAATCAACAACCCCTCCTTCTAATCTCTGTATGCAGAAGTTCAGGCTTTATGAAACTCGATCGCTCAATTTGGCTCTTATTTTAATGTTGCAATGTGGAGTGTTTTTAGAAGAAACATGGTGGACTGAAAACTTTTACATGATAGGGAGGGACAAGAGTAGGACTTACTGGAGGGTACTTAAGATTGACCGGCTAGATCCTTCAGAGCTAAATGTACGAGAAGATTCCACCACATATACAGAAAGGGAATGTTCTGATCTTTTGAGGCGGATACATGAGGGGAACAAAGCCACTGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGATTCATCAAATTTCTGGGGCCTTACTACATGCTACTTATCACGAAAAGAAGGCAAATTGGTGCAATCTGCGGTCACACAGTATATGCTATCTCAAAGACTGAGATGATTCCGCTGCCGAATTCTTCTGTTCGGTCTAACATCATCAATTCTAAAAATGAAAACAGGTACAAGAAGCTTCTATGCACAGTTGACCTTACGAAGGACTTCTTTTTCAGCTACTCATACCAAATTATGCGTAGTCTTCAAAGGAACATGTGTGACACTGAGACAGGCCATGTCCTTTACGAGACCATGTTTGTCTGGAATGAATTCTTAACCCGAGGAATTAGGAATCACCTTCAGAATACTACTTGGACAGTTGCACTAGTTTATGGCTTCTTTAAACAGGACACACTTGAGATATCTGGACGGGAGTTCATACTGACGCTCATTGCGAGAAGATCACGCCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAGGGCAGAGTAGCGAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTCCAGAAGGTCTTCCCATCAAAATTAGCTCTATCATCCAGAATCGTGGCTCAATCCCTCTTTATTGGTCACAGGAAACTTCACGTCTAAATATTAAACCAGATATCATATTGTCAAAGAAGGATCAGAATTATCAAGCCACTAAACTTCACTTTGAAAATCTTGTCAAAAGATACGGAAATCCCATTATAATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGTGAAGCCATTCTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATCAATAAAGATCTGTCTGAAGAGAACAGGCTTAGGTTCCTTCACTGGGATCTTCACAAACATTTTCAGAGCAAAGCTACAAATGTGTTGCTGCTTCTAGGCAAAGTGGCTGCATATGCTTTGACGTTAACAGGTTTTTTCTATTGTCAAGTGTCTTCAACCTTGAGACCTGAAGACTGTCTAAAATGGCCATCTACAGATGATGTTGATAAGGGAAGCTTTTCACCTACTGTGCATGTGGAATATGATAACGAGGATGCTAATGATTTAGAAAGGAAACCAAGTGACGGAATCAATGTTTCCGATGAAAATCATTCTACCAAACCACCCAGGTTGCAAAATGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGGACAAATGTTGCACAGTATGCGTATGGGTTGGCTGCTATTGGCCACCAGCTTCACTCTCTGGGAATTATTGAGCACCCAAAAATTGATCTCGATGACCCTGTAGCTAACGATTTGATGCAGTTTTATGAGCGGATGGGTGACACACTTGCACATCAATACGGTGGTTCTGCTGCACACAACAAGATATTCTCTGCAAGGAGGGGCCAGTGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGAACTCTTCAACGCTATTACAGCAATGCTTGGATGGATGCTGAGAAACAAGATGCTATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGATAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCACTATGATACAGGGAGAATTGGTGATGATGATGCAAGGTCATTTTTCAAAAGATCTTTCTCAGACGGAAACATTCTTCGTGACAGTTCTACACCTATGCCAGCTCCAAATGCCAAGGACGAAAAATTCTCAAACCCAGGTTTACCAGATCGATCAGGAGAAGGGAGCAAGGCCTTTTGTGAGTCGTCACCTGAAATATCTACTACTGAAACTGAGAGTGACATTTCATTTTCAAGATACACCCCCTCAATGCCTCGGAGACAGCTTTTTGTGGACATGCAGAAAGAGCGCTGTGCTGAGAGTCATCATATTTACTATTCTGAGCATGGGGATTCCTTCAGCTGCTCTAACTTTGTGGACCTGGATTGGCTATCTTCGTCAGCAAATTCGTGTGAAGAAGATCCATACGAGAGGTCATCAATTACCAACTCCCCAGTTGGCGGGCTTTCATCAGAAAATGTTGTCAATGGAGAGATAGTAGGAGAAACAGCTGCCTCCACTAGTGATTGGGGCAGCACCAGCCTGAAGGAGAGGGAGCCAACTGAATCTGAGGTATCCTACAGTGAAGCACGGTCCAACAATCAGAATGAATTTCCTGATACTTTCGTTGAATGGGTGACTTATGGACAGACACTTTGCCATTGA
Protein sequence

>Msa1333340

MASSDNFEPSSLSHQSTTPPSNLCMQKFRLYETRSLNLALILMLQCGVFLEETWWTENFYMIGRDKSRTYWRVLKIDRLDPSELNVREDSTTYTERECSDLLRRIHEGNKATGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAISKTEMIPLPNSSVRSNIINSKNENRYKKLLCTVDLTKDFFFSYSYQIMRSLQRNMCDTETGHVLYETMFVWNEFLTRGIRNHLQNTTWTVALVYGFFKQDTLEISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVPEGLPIKISSIIQNRGSIPLYWSQETSRLNIKPDIILSKKDQNYQATKLHFENLVKRYGNPIIILNLIKTHEKKPREAILRQEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKATNVLLLLGKVAAYALTLTGFFYCQVSSTLRPEDCLKWPSTDDVDKGSFSPTVHVEYDNEDANDLERKPSDGINVSDENHSTKPPRLQNGVLRTNCIDCLDRTNVAQYAYGLAAIGHQLHSLGIIEHPKIDLDDPVANDLMQFYERMGDTLAHQYGGSAAHNKIFSARRGQWRAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQQDKPALWELGSDQHYDTGRIGDDDARSFFKRSFSDGNILRDSSTPMPAPNAKDEKFSNPGLPDRSGEGSKAFCESSPEISTTETESDISFSRYTPSMPRRQLFVDMQKERCAESHHIYYSEHGDSFSCSNFVDLDWLSSSANSCEEDPYERSSITNSPVGGLSSENVVNGEIVGETAASTSDWGSTSLKEREPTESEVSYSEARSNNQNEFPDTFVEWVTYGQTLCH*