Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1334380 | sp|O74999|RAD7_SCHPO | 24.515 | 412 | 250 | 13 | 869 | 1241 | 135 | 524 | 1.82e-14 | 81.6 |
Msa1334380 | sp|O74999|RAD7_SCHPO | 25.806 | 341 | 213 | 10 | 299 | 603 | 188 | 524 | 2.29e-11 | 72.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1334380 | A0A072URM6 | 69.913 | 688 | 151 | 10 | 673 | 1309 | 9 | 691 | 0.0 | 894 |
Msa1334380 | A0A072URM6 | 89.177 | 693 | 28 | 7 | 10 | 664 | 1 | 684 | 0.0 | 1190 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1266340 | Msa1334380 | 0.940311 | 2.900650e-100 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1334380 | MtrunA17_Chr4g0070541 | 89.177 | 693 | 28 | 7 | 10 | 664 | 1 | 684 | 0.0 | 1190 |
Msa1334380 | MtrunA17_Chr4g0070541 | 69.913 | 688 | 151 | 10 | 673 | 1309 | 9 | 691 | 0.0 | 894 |
Msa1334380 | MtrunA17_Chr4g0070521 | 91.239 | 331 | 10 | 2 | 998 | 1309 | 2 | 332 | 0.0 | 593 |
Msa1334380 | MtrunA17_Chr4g0070521 | 73.765 | 324 | 42 | 2 | 384 | 664 | 2 | 325 | 1.75e-145 | 444 |
Msa1334380 | MtrunA17_Chr2g0300611 | 50.839 | 596 | 247 | 10 | 741 | 1308 | 118 | 695 | 5.81e-177 | 540 |
Msa1334380 | MtrunA17_Chr2g0300611 | 49.830 | 588 | 228 | 11 | 120 | 664 | 126 | 689 | 3.05e-167 | 515 |
Msa1334380 | MtrunA17_Chr3g0092191 | 68.063 | 191 | 44 | 2 | 977 | 1158 | 6 | 188 | 6.56e-74 | 243 |
Msa1334380 | MtrunA17_Chr3g0092191 | 73.529 | 170 | 32 | 3 | 384 | 543 | 19 | 185 | 8.18e-64 | 214 |
Msa1334380 | MtrunA17_Chr3g0092201 | 68.063 | 191 | 44 | 2 | 977 | 1158 | 6 | 188 | 6.56e-74 | 243 |
Msa1334380 | MtrunA17_Chr3g0092201 | 73.529 | 170 | 32 | 3 | 384 | 543 | 19 | 185 | 8.18e-64 | 214 |
Msa1334380 | MtrunA17_Chr3g0092211 | 56.109 | 221 | 78 | 4 | 146 | 366 | 46 | 247 | 7.59e-64 | 217 |
Msa1334380 | MtrunA17_Chr3g0092211 | 55.963 | 218 | 72 | 6 | 773 | 980 | 44 | 247 | 3.11e-59 | 204 |
Msa1334380 | MtrunA17_Chr4g0070491 | 70.395 | 152 | 44 | 1 | 847 | 998 | 52 | 202 | 1.02e-63 | 216 |
Msa1334380 | MtrunA17_Chr4g0070491 | 60.622 | 193 | 65 | 2 | 221 | 413 | 50 | 231 | 1.17e-61 | 210 |
Msa1334380 | MtrunA17_Chr4g0070511 | 80.208 | 96 | 18 | 1 | 1186 | 1281 | 8 | 102 | 4.40e-43 | 152 |
Msa1334380 | MtrunA17_Chr4g0070511 | 79.167 | 96 | 19 | 1 | 548 | 643 | 8 | 102 | 3.58e-42 | 149 |
Msa1334380 | MtrunA17_Chr4g0070531 | 89.873 | 79 | 8 | 0 | 919 | 997 | 1 | 79 | 2.64e-40 | 144 |
Msa1334380 | MtrunA17_Chr4g0070531 | 82.278 | 79 | 14 | 0 | 305 | 383 | 1 | 79 | 7.92e-36 | 131 |
Msa1334380 | MtrunA17_Chr1g0176031 | 32.967 | 182 | 117 | 4 | 1096 | 1276 | 136 | 313 | 8.48e-15 | 77.8 |
Msa1334380 | MtrunA17_Chr4g0063861 | 27.237 | 257 | 172 | 7 | 1024 | 1267 | 93 | 347 | 4.32e-14 | 75.9 |
Msa1334380 | MtrunA17_Chr3g0125671 | 30.612 | 196 | 133 | 2 | 1086 | 1279 | 92 | 286 | 1.55e-13 | 73.9 |
Msa1334380 | MtrunA17_Chr4g0004901 | 30.952 | 252 | 145 | 10 | 1047 | 1292 | 311 | 539 | 1.55e-11 | 68.9 |
Msa1334380 | MtrunA17_Chr4g0063841 | 26.255 | 259 | 172 | 8 | 1024 | 1267 | 336 | 590 | 3.19e-11 | 67.8 |
Msa1334380 | MtrunA17_Chr1g0212071 | 31.892 | 185 | 112 | 4 | 996 | 1171 | 162 | 341 | 4.06e-11 | 67.0 |
Msa1334380 | MtrunA17_Chr1g0212071 | 30.808 | 198 | 129 | 4 | 1091 | 1282 | 78 | 273 | 4.13e-11 | 66.6 |
Msa1334380 | MtrunA17_Chr1g0212071 | 24.567 | 289 | 153 | 6 | 1038 | 1287 | 95 | 357 | 9.11e-11 | 65.9 |
Msa1334380 | MtrunA17_Chr1g0159531 | 32.877 | 146 | 95 | 2 | 1135 | 1278 | 129 | 273 | 5.62e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1334380 | AT2G06040.1 | 47.925 | 482 | 222 | 7 | 836 | 1294 | 286 | 761 | 3.97e-135 | 432 |
Msa1334380 | AT2G06040.1 | 46.371 | 496 | 209 | 8 | 203 | 656 | 281 | 761 | 3.25e-125 | 406 |
Msa1334380 | AT5G21900.1 | 40.399 | 401 | 227 | 3 | 907 | 1297 | 139 | 537 | 9.95e-76 | 262 |
Msa1334380 | AT5G21900.1 | 38.557 | 402 | 213 | 5 | 296 | 663 | 140 | 541 | 1.16e-65 | 233 |
Msa1334380 | AT5G21900.2 | 35.786 | 299 | 180 | 3 | 907 | 1195 | 139 | 435 | 4.18e-42 | 161 |
Msa1334380 | AT5G21900.2 | 33.446 | 296 | 163 | 4 | 296 | 557 | 140 | 435 | 9.42e-33 | 133 |
Msa1334380 | AT3G58530.1 | 34.066 | 182 | 113 | 5 | 1097 | 1276 | 139 | 315 | 6.68e-15 | 78.6 |
Msa1334380 | AT5G23340.1 | 30.882 | 204 | 136 | 4 | 1070 | 1270 | 99 | 300 | 7.51e-15 | 79.0 |
Msa1334380 | AT5G23340.1 | 27.465 | 284 | 187 | 9 | 995 | 1266 | 99 | 375 | 1.59e-11 | 68.6 |
Msa1334380 | AT1G21410.2 | 30.645 | 186 | 124 | 4 | 1085 | 1267 | 80 | 263 | 2.07e-13 | 73.9 |
Msa1334380 | AT1G21410.1 | 30.645 | 186 | 124 | 4 | 1085 | 1267 | 80 | 263 | 2.07e-13 | 73.9 |
Msa1334380 | AT1G77000.2 | 33.728 | 169 | 104 | 6 | 1124 | 1286 | 92 | 258 | 2.23e-11 | 67.8 |
Msa1334380 | AT1G77000.1 | 33.728 | 169 | 104 | 6 | 1124 | 1286 | 92 | 258 | 2.23e-11 | 67.8 |
Msa1334380 | AT1G77000.3 | 35.135 | 148 | 90 | 5 | 1124 | 1267 | 92 | 237 | 8.92e-11 | 64.3 |
Msa1334380 | AT1G77000.4 | 35.135 | 148 | 90 | 5 | 1124 | 1267 | 92 | 237 | 8.92e-11 | 64.3 |
Msa1334380 | AT2G25490.1 | 26.642 | 274 | 185 | 8 | 1024 | 1285 | 334 | 603 | 9.45e-11 | 66.6 |
Find 218 sgRNAs with CRISPR-Local
Find 948 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAACATTGGCTTAGATTTA+TGG | 0.125241 | 8_4:+54790667 | None:intergenic |
GAAGAATTTACAAAATATTT+TGG | 0.145879 | 8_4:-54794007 | Msa1334380:CDS |
GGAACATTGACTTAGATTTA+TGG | 0.211918 | 8_4:+54804158 | None:intergenic |
TTGTTAAGGAATCCTTTATT+TGG | 0.218045 | 8_4:-54804913 | Msa1334380:CDS |
CTCTTGATCTTATGAACTTA+TGG | 0.218689 | 8_4:-54803587 | Msa1334380:CDS |
TGTTGTTGTTGGGTGGAATT+TGG | 0.223608 | 8_4:+54805667 | None:intergenic |
GTGAGTGGTTTCTTTCCTTT+TGG | 0.224216 | 8_4:+54794661 | None:intergenic |
ATGAGTGGTTTCTTGCCTTT+TGG | 0.239753 | 8_4:+54805346 | None:intergenic |
TTTGGTGAAGGGAAGGTTTA+GGG | 0.277701 | 8_4:-54804867 | Msa1334380:CDS |
GCATGTCGTCTTACTGATAA+AGG | 0.278098 | 8_4:-54790728 | Msa1334380:CDS |
AATATATAGATCCTGAAATT+TGG | 0.281714 | 8_4:-54788717 | Msa1334380:three_prime_UTR |
AACAAGTTGTGCCAAATTTC+AGG | 0.287443 | 8_4:+54788706 | None:intergenic |
AACTCAGAGCTTCAGATCAT+TGG | 0.288389 | 8_4:-54788860 | Msa1334380:CDS |
GATGGACTTGCTTCGCTTGA+TGG | 0.292409 | 8_4:-54794166 | Msa1334380:CDS |
TAATAAACATACCTCTAATA+TGG | 0.303091 | 8_4:+54793970 | None:intergenic |
TCTTTGATATGTTGCAATAA+AGG | 0.303235 | 8_4:+54788824 | None:intergenic |
TGAATATGATTGGGAGATTC+AGG | 0.304614 | 8_4:+54794796 | None:intergenic |
GCTTGCCGTCTTACTGATAA+GGG | 0.308427 | 8_4:-54804219 | Msa1334380:CDS |
ATGGGAGAATCAAGAGAAAA+TGG | 0.311651 | 8_4:+54805502 | None:intergenic |
TGTTAAGGAATCCTTTATTT+GGG | 0.315948 | 8_4:-54804912 | Msa1334380:CDS |
GTGGGTTTCCTACTCGTATT+CGG | 0.322622 | 8_4:-54794057 | Msa1334380:CDS |
CAAGAATAAGAAACAGAAAA+TGG | 0.326473 | 8_4:-54794947 | Msa1334380:CDS |
ATTTGGTGAAGGGAAGGTTT+AGG | 0.331229 | 8_4:-54804868 | Msa1334380:CDS |
ACCTCTGCCGCAATCCATTC+AGG | 0.343022 | 8_4:-54803503 | Msa1334380:intron |
GAAAAGGAACGGAGAAGATT+TGG | 0.343662 | 8_4:-54804885 | Msa1334380:CDS |
AACTTAGAGATTCAGATCAT+TGG | 0.344333 | 8_4:-54802245 | Msa1334380:CDS |
GTGGGTTTCCTACTCATATT+CGG | 0.345183 | 8_4:-54804688 | Msa1334380:CDS |
TGCTTCGCTTGATGGTGTTT+CGG | 0.345817 | 8_4:-54794158 | Msa1334380:CDS |
GTTGGACAATTCCATATTAG+AGG | 0.347932 | 8_4:-54793981 | Msa1334380:intron |
AACTGAAAATCAAATTTCAT+TGG | 0.352025 | 8_4:-54805248 | Msa1334380:CDS |
AAGAAGAGGTATAAGATTCA+TGG | 0.355919 | 8_4:+54805407 | None:intergenic |
GATTATACCAATTTCTTTGT+CGG | 0.358951 | 8_4:+54805558 | None:intergenic |
AACTTGACAGACAATGAGTT+TGG | 0.360038 | 8_4:-54789109 | Msa1334380:CDS |
TTCATCTCTATGAATATGAT+TGG | 0.362764 | 8_4:+54794786 | None:intergenic |
GAAGAATTCACTAAATGTTT+CGG | 0.369076 | 8_4:-54804638 | Msa1334380:CDS |
TGTTGGGTGGAATTTGGATT+GGG | 0.369587 | 8_4:+54805673 | None:intergenic |
AATTTGACAGACAATGAGTT+TGG | 0.369880 | 8_4:-54802467 | Msa1334380:CDS |
GATGGAATGGTTTCACTTGA+TGG | 0.377697 | 8_4:-54804797 | Msa1334380:CDS |
GGTTTCACTTGATGGTGTTT+CGG | 0.380171 | 8_4:-54804789 | Msa1334380:CDS |
TGCTTGCCGTCTTACTGATA+AGG | 0.380416 | 8_4:-54804220 | Msa1334380:CDS |
AAATTGACCGATTTAACTAT+AGG | 0.383538 | 8_4:-54803564 | Msa1334380:CDS |
AGAACACTTTGATGAGGATT+AGG | 0.390177 | 8_4:+54788800 | None:intergenic |
TAATGTACATACCTCTAGTA+TGG | 0.392894 | 8_4:+54804601 | None:intergenic |
AGAGACATTTCTTGCAAAGA+AGG | 0.395958 | 8_4:+54804842 | None:intergenic |
TCTTTGATATGCTGCAATAA+AGG | 0.396565 | 8_4:+54802209 | None:intergenic |
AGCTATGCCGCAATTCATTC+AGG | 0.396883 | 8_4:-54790088 | Msa1334380:intron |
TGGAATTTGGATTGGGAATG+AGG | 0.398413 | 8_4:+54805680 | None:intergenic |
TTCAATTCCTCTCTTGAGAA+AGG | 0.400326 | 8_4:+54805471 | None:intergenic |
TTGTTGATGAATCCCTTACT+TGG | 0.405185 | 8_4:-54794282 | Msa1334380:CDS |
TTCGGCTTAAAGATTGCTCT+TGG | 0.405240 | 8_4:-54794039 | Msa1334380:CDS |
TTGTTGGGTGGAATTTGGAT+TGG | 0.405658 | 8_4:+54805672 | None:intergenic |
GGGAGGGACATCGTTGGGAT+TGG | 0.408663 | 8_4:+54794918 | None:intergenic |
GATTGCACCAATTTCTTTGT+CGG | 0.408811 | 8_4:+54794846 | None:intergenic |
ACCAGAAAATCAAATACCTT+TGG | 0.409575 | 8_4:-54794587 | Msa1334380:CDS |
ATTGTTTCAGAGAAAGGAGT+TGG | 0.410164 | 8_4:+54794349 | None:intergenic |
TTCAGTTCCTCTCTTGAGAA+AGG | 0.410404 | 8_4:+54794750 | None:intergenic |
ACTTAGAGATTCAGATCATT+GGG | 0.413780 | 8_4:-54802244 | Msa1334380:CDS |
AAGTTCTTCCAAGGATTTGC+CGG | 0.415989 | 8_4:+54803040 | None:intergenic |
GGAGGGACATCGTTGGGATT+GGG | 0.416701 | 8_4:+54794919 | None:intergenic |
TCGACACCATGATAGATCTA+AGG | 0.422217 | 8_4:+54789132 | None:intergenic |
CACTAAATGTTTCGGAATGT+TGG | 0.424026 | 8_4:-54804630 | Msa1334380:CDS |
AGCAAGTCCATCAGCATGAT+TGG | 0.427096 | 8_4:+54794177 | None:intergenic |
TTCTATCACAAAACAACTAA+AGG | 0.427212 | 8_4:-54805593 | Msa1334380:CDS |
TGATAAGGGGTTGCAGCTAC+TGG | 0.429928 | 8_4:-54804205 | Msa1334380:CDS |
AAGATATCCTATAGTTAAAT+CGG | 0.432326 | 8_4:+54803557 | None:intergenic |
GCTTTGATTGTTTCAGAGAA+AGG | 0.433134 | 8_4:+54794343 | None:intergenic |
ACCTGAATGGATTGCGGCAG+AGG | 0.435528 | 8_4:+54803502 | None:intergenic |
AAGAACAAGGTTGTTGTTGT+TGG | 0.435586 | 8_4:+54805656 | None:intergenic |
TCGACACCATGACAGATCTA+AGG | 0.436932 | 8_4:+54802490 | None:intergenic |
GCTTTGATTGCTTCAGAGAA+AGG | 0.436946 | 8_4:+54804974 | None:intergenic |
ATCAATCTAGACAAGCAGTT+TGG | 0.438764 | 8_4:+54790770 | None:intergenic |
CTTGAGAAAGGGCTCATGAA+TGG | 0.439348 | 8_4:+54805483 | None:intergenic |
TGCATGTGGTCAGAATATTA+AGG | 0.440998 | 8_4:-54803941 | Msa1334380:CDS |
CCTTTATTTGGGTTCCGAAA+AGG | 0.447400 | 8_4:-54804901 | Msa1334380:CDS |
ACTCAGAGCTTCAGATCATT+GGG | 0.448684 | 8_4:-54788859 | Msa1334380:CDS |
TAACGCAGAGCGCCTTGGTT+AGG | 0.449476 | 8_4:+54802179 | None:intergenic |
GGGACATCGTTGGGATTGGG+TGG | 0.449987 | 8_4:+54794922 | None:intergenic |
TGATGCTGCACTAATCTTGT+CGG | 0.450638 | 8_4:-54804049 | Msa1334380:CDS |
ACTTGGGTTTCAAAACTGAA+TGG | 0.452013 | 8_4:-54794265 | Msa1334380:CDS |
TTCACTTAATAACATTAAGA+AGG | 0.453409 | 8_4:-54789553 | Msa1334380:intron |
TTCACTTAACAACATTAAGA+AGG | 0.453409 | 8_4:-54803018 | Msa1334380:intron |
ATCAATGTCATTGATAATGA+TGG | 0.458882 | 8_4:+54794624 | None:intergenic |
AGAGCGCCTTGGTTAGGATT+AGG | 0.461086 | 8_4:+54802185 | None:intergenic |
TCATCTCTATGAATATGATT+GGG | 0.463114 | 8_4:+54794787 | None:intergenic |
GGAGATAAATGGCAAATCCT+TGG | 0.463905 | 8_4:-54789583 | Msa1334380:CDS |
TGCATTGTTTGCAAGTGATA+AGG | 0.463961 | 8_4:+54802526 | None:intergenic |
TCTATCACAAAACAACTAAA+GGG | 0.466003 | 8_4:-54805592 | Msa1334380:CDS |
TGCATACCTTAGATCTATCA+TGG | 0.466392 | 8_4:-54789138 | Msa1334380:CDS |
GAAAACACTTCTGACCCAAA+AGG | 0.470260 | 8_4:-54794676 | Msa1334380:CDS |
GATAGAAGTTATGTCATCAA+TGG | 0.472596 | 8_4:+54794897 | None:intergenic |
ACGTGTCAATTCGTAGAAAT+CGG | 0.472613 | 8_4:-54805144 | Msa1334380:CDS |
GATTCAGGAACAAATGTTGA+TGG | 0.473771 | 8_4:+54794811 | None:intergenic |
TTCGGCTTAAAGATTGCTCC+TGG | 0.473844 | 8_4:-54804670 | Msa1334380:CDS |
AGAAGAGGTATAAGATTCAT+GGG | 0.475045 | 8_4:+54805408 | None:intergenic |
GAGTTACTAAAAGCAACAAA+AGG | 0.478037 | 8_4:-54794309 | Msa1334380:CDS |
GGAGATGACCGGCAAATCCT+TGG | 0.478721 | 8_4:-54803048 | Msa1334380:CDS |
TTAGAAGTATTGTCACTAGC+TGG | 0.481811 | 8_4:-54790515 | Msa1334380:CDS |
TCAATTCCTCTCTTGAGAAA+GGG | 0.482461 | 8_4:+54805472 | None:intergenic |
GGAATTTGGATTGGGAATGA+GGG | 0.482803 | 8_4:+54805681 | None:intergenic |
TTGAGAAAGGGCTCATGAAT+GGG | 0.486382 | 8_4:+54805484 | None:intergenic |
AGAACAAGGTTGTTGTTGTT+GGG | 0.488686 | 8_4:+54805657 | None:intergenic |
ATATACATTACCTTGTACAT+TGG | 0.489187 | 8_4:-54790801 | Msa1334380:CDS |
AGTTACTAAAAGCAACAAAA+GGG | 0.489599 | 8_4:-54794308 | Msa1334380:CDS |
TCAGTTCCTCTCTTGAGAAA+GGG | 0.489973 | 8_4:+54794751 | None:intergenic |
ATTGCTTCAGAGAAAGGTGT+TGG | 0.491476 | 8_4:+54804980 | None:intergenic |
GGTGACTTTGCCAATGTACA+AGG | 0.493188 | 8_4:+54790791 | None:intergenic |
CAATGAGTTTGGTTTAATTG+TGG | 0.494252 | 8_4:-54802456 | Msa1334380:CDS |
GAGTGGAGGAACAGAACAAT+TGG | 0.494440 | 8_4:+54805627 | None:intergenic |
TGGATAGCTGTTTGTCGCTA+AGG | 0.496627 | 8_4:-54802436 | Msa1334380:CDS |
TGTTGATGAATCCCTTACTT+GGG | 0.497405 | 8_4:-54794281 | Msa1334380:CDS |
TGCTAACCATGCTGATGGAA+TGG | 0.498656 | 8_4:-54804810 | Msa1334380:CDS |
TCAATGGGAGGGACATCGTT+GGG | 0.499590 | 8_4:+54794913 | None:intergenic |
ACATGAAATTGACGATAACT+TGG | 0.501090 | 8_4:-54805032 | Msa1334380:CDS |
GGAACATTTGATGATGATGA+TGG | 0.502959 | 8_4:+54805523 | None:intergenic |
ATAGAAGTTATGTCATCAAT+GGG | 0.503349 | 8_4:+54794898 | None:intergenic |
ATATTGATATAAATTAGAAC+TGG | 0.503959 | 8_4:-54788752 | Msa1334380:three_prime_UTR |
ATTCTTGCTAACCATGCTGA+TGG | 0.505214 | 8_4:-54804815 | Msa1334380:CDS |
CAAACAAAGGCTTAGCGCAT+TGG | 0.507209 | 8_4:-54804759 | Msa1334380:CDS |
CAAGTGATAAGCTTGTTTGT+TGG | 0.508995 | 8_4:+54789179 | None:intergenic |
ATATACATTACTTTCTACAT+TGG | 0.509772 | 8_4:-54804292 | Msa1334380:CDS |
GTTAAGTGAAAGTTCTTCCA+AGG | 0.510904 | 8_4:+54803031 | None:intergenic |
ATTAAGTGAAAGTTCTTCCA+AGG | 0.513343 | 8_4:+54789566 | None:intergenic |
ATTCTTGCCAATCATGCTGA+TGG | 0.514966 | 8_4:-54794184 | Msa1334380:CDS |
GTATAAGATTCATGGGGTAA+TGG | 0.515303 | 8_4:+54805415 | None:intergenic |
ATGAATAACGCAGAGCGCCT+TGG | 0.517875 | 8_4:+54802174 | None:intergenic |
TTCTTGAACTACTTCTAAGT+GGG | 0.518300 | 8_4:-54794075 | Msa1334380:CDS |
TTCTTGAACTACTTCTAAGT+GGG | 0.518300 | 8_4:-54804706 | Msa1334380:CDS |
TTTCTTGAACTACTTCTAAG+TGG | 0.520179 | 8_4:-54794076 | Msa1334380:CDS |
TTTCTTGAACTACTTCTAAG+TGG | 0.520179 | 8_4:-54804707 | Msa1334380:CDS |
ATAAACTTATCACAAACAGT+TGG | 0.520326 | 8_4:+54803979 | None:intergenic |
AACGGAGAAGATTTGGTGAA+GGG | 0.523277 | 8_4:-54804878 | Msa1334380:CDS |
TTCTATCACAGAACAACTGA+AGG | 0.526237 | 8_4:-54794881 | Msa1334380:CDS |
GAAGACGCGTGATCAGAGTC+AGG | 0.527762 | 8_4:+54794727 | None:intergenic |
AACAAATGTTGATGGGGCTA+AGG | 0.527767 | 8_4:+54794819 | None:intergenic |
TCGATAGCTGCTCGTCGTTG+AGG | 0.529095 | 8_4:-54789078 | Msa1334380:CDS |
CATGTCGTCTTACTGATAAA+GGG | 0.531848 | 8_4:-54790727 | Msa1334380:CDS |
CTCTTGAGAAAGGGTTCATG+TGG | 0.533225 | 8_4:+54794760 | None:intergenic |
AAAACAAGAGACCACCTGAA+TGG | 0.533318 | 8_4:+54803489 | None:intergenic |
GAACATTTGATGATGATGAT+GGG | 0.536864 | 8_4:+54805524 | None:intergenic |
TTAGAAGTGTTATCACTAGC+TGG | 0.543668 | 8_4:-54804006 | Msa1334380:CDS |
GAGAAGATTTGGTGAAGGGA+AGG | 0.547684 | 8_4:-54804874 | Msa1334380:CDS |
AGAGACATTTCTTGCAGCGA+AGG | 0.548243 | 8_4:+54794211 | None:intergenic |
ATTCAGGAACAAATGTTGAT+GGG | 0.548247 | 8_4:+54794812 | None:intergenic |
CAAACAAAGGCTTAGCGCGT+TGG | 0.549852 | 8_4:-54794128 | Msa1334380:CDS |
ACAAGGTTGTTGTTGTTGGG+TGG | 0.551660 | 8_4:+54805660 | None:intergenic |
TTGATTAGTCTATCCCTCAC+TGG | 0.552362 | 8_4:-54804243 | Msa1334380:CDS |
ACTATTTGCAAGATATCTGA+TGG | 0.556925 | 8_4:+54790133 | None:intergenic |
ATGTTGATGGGGCTAAGGTA+AGG | 0.558035 | 8_4:+54794824 | None:intergenic |
TGCATACCTTAGATCTGTCA+TGG | 0.558362 | 8_4:-54802496 | Msa1334380:CDS |
AAGACTAGCATATGTGAGAA+GGG | 0.561550 | 8_4:+54804137 | None:intergenic |
ATCAGTAAGACGACATGCAC+CGG | 0.562633 | 8_4:+54790733 | None:intergenic |
TAAGACTAGCATATGTGAGA+AGG | 0.562795 | 8_4:+54804136 | None:intergenic |
ATCAATGGGAGGGACATCGT+TGG | 0.563513 | 8_4:+54794912 | None:intergenic |
CATGAGCCCTTTCTCAAGAG+AGG | 0.565578 | 8_4:-54805478 | Msa1334380:CDS |
ATCAATCTAGACAAGCAGCT+TGG | 0.566575 | 8_4:+54804261 | None:intergenic |
CATGAAGTTGATGCTGATGA+TGG | 0.568513 | 8_4:-54805007 | Msa1334380:CDS |
CAATGACATTGATGATCGGA+AGG | 0.571714 | 8_4:-54794614 | Msa1334380:CDS |
GAATTCTTCCTCTGTCAACC+AGG | 0.572099 | 8_4:+54804652 | None:intergenic |
GCGCTTGGAAGAGGAAGAAG+AGG | 0.579322 | 8_4:+54805393 | None:intergenic |
ATTTGGGTTCCGAAAAGGAA+CGG | 0.581845 | 8_4:-54804896 | Msa1334380:CDS |
GAACGGAGAAGATTTGGTGA+AGG | 0.582661 | 8_4:-54804879 | Msa1334380:CDS |
CAATTCGTAGAAATCGGTAC+AGG | 0.584763 | 8_4:-54805138 | Msa1334380:CDS |
TGATGAAGATGATCAGAGGA+AGG | 0.587981 | 8_4:-54805275 | Msa1334380:CDS |
TCTTTAAGCCGAATATGAGT+AGG | 0.588830 | 8_4:+54804680 | None:intergenic |
TTTCGGATGAGCTCAAACAA+AGG | 0.594265 | 8_4:-54804772 | Msa1334380:CDS |
GTGGAACATGAAATTGATGA+TGG | 0.595061 | 8_4:-54794376 | Msa1334380:CDS |
TTTCGGACGAGCTCAAACAA+AGG | 0.595714 | 8_4:-54794141 | Msa1334380:CDS |
AGGAACAGAACAATTGGAAG+AGG | 0.600540 | 8_4:+54805633 | None:intergenic |
TTATCATCATCATCAATGAG+TGG | 0.602880 | 8_4:+54805331 | None:intergenic |
TCTTTAAGCCGAATACGAGT+AGG | 0.603741 | 8_4:+54794049 | None:intergenic |
TTGATTAGTCTATCTCTCAC+CGG | 0.606899 | 8_4:-54790752 | Msa1334380:CDS |
ATGAATTTATCAGAAACAGT+AGG | 0.611579 | 8_4:+54790488 | None:intergenic |
CTTGCCGTCTTACTGATAAG+GGG | 0.612726 | 8_4:-54804218 | Msa1334380:CDS |
TTATCAATGACATTGATGAT+CGG | 0.616205 | 8_4:-54794618 | Msa1334380:CDS |
ATGAATTATATCATTACATG+TGG | 0.617330 | 8_4:-54790464 | Msa1334380:CDS |
AAGTTATGTCATCAATGGGA+GGG | 0.619652 | 8_4:+54794902 | None:intergenic |
GTTACTAAAAGCAACAAAAG+GGG | 0.623035 | 8_4:-54794307 | Msa1334380:CDS |
TTCAGGAACAAATGTTGATG+GGG | 0.625146 | 8_4:+54794813 | None:intergenic |
CATGAACCCTTTCTCAAGAG+AGG | 0.626021 | 8_4:-54794757 | Msa1334380:CDS |
AAGACGGCAAGCACCAGTGA+GGG | 0.627353 | 8_4:+54804230 | None:intergenic |
TTTATCACACAGTTTCACGT+GGG | 0.628199 | 8_4:-54805751 | None:intergenic |
CAAGTGATAAGGTTGTCTGT+TGG | 0.628327 | 8_4:+54802537 | None:intergenic |
ATTTATCACACAGTTTCACG+TGG | 0.628940 | 8_4:-54805752 | None:intergenic |
TATCGCAGAACACTTTGATG+AGG | 0.629716 | 8_4:+54788794 | None:intergenic |
TTACTAAAAGCAACAAAAGG+GGG | 0.632277 | 8_4:-54794306 | Msa1334380:CDS |
CTGTTATAACTCGTCCACAC+TGG | 0.634753 | 8_4:+54804316 | None:intergenic |
GAAGTTATGTCATCAATGGG+AGG | 0.634918 | 8_4:+54794901 | None:intergenic |
GTGAAACCATTCCATCAGCA+TGG | 0.636782 | 8_4:+54804804 | None:intergenic |
GCAACCCCTTATCAGTAAGA+CGG | 0.637906 | 8_4:+54804214 | None:intergenic |
GTTGGACACTTCCATACTAG+AGG | 0.638302 | 8_4:-54804612 | Msa1334380:intron |
ACAGAACAACTGAAGGGCCA+CGG | 0.640794 | 8_4:-54794874 | Msa1334380:CDS |
GGACATCGTTGGGATTGGGT+GGG | 0.642293 | 8_4:+54794923 | None:intergenic |
GAATCAACATCGCTGAGTGG+AGG | 0.643579 | 8_4:+54805613 | None:intergenic |
GTGATGATGAAGATGATCAG+AGG | 0.644752 | 8_4:-54805279 | Msa1334380:CDS |
ACAAAACAACTAAAGGGTCA+CGG | 0.644979 | 8_4:-54805586 | Msa1334380:CDS |
AACATTTGATGATGATGATG+GGG | 0.645179 | 8_4:+54805525 | None:intergenic |
ATATCAAGTGCATGCAACTG+AGG | 0.645281 | 8_4:+54790185 | None:intergenic |
GTGCTGCAACTTCAGCAATG+TGG | 0.659129 | 8_4:-54790839 | Msa1334380:CDS |
AAGAGTTACATCATTGCATG+TGG | 0.660843 | 8_4:-54803955 | Msa1334380:CDS |
AAAGAGCCTAATCCTAACCA+AGG | 0.660986 | 8_4:-54802191 | Msa1334380:CDS |
AGATTGCTCCTGGTTGACAG+AGG | 0.662635 | 8_4:-54804660 | Msa1334380:CDS |
ACTGAAACTAATGATAGCGA+TGG | 0.669764 | 8_4:-54805190 | Msa1334380:CDS |
GAGACCACCTGAATGGATTG+CGG | 0.672864 | 8_4:+54803496 | None:intergenic |
TGAAGATGATCATCATGCGG+CGG | 0.676628 | 8_4:-54805056 | Msa1334380:CDS |
GAGACCACCTGAATGAATTG+CGG | 0.677135 | 8_4:+54790081 | None:intergenic |
ATTTCTACGAATTGACACGT+TGG | 0.678256 | 8_4:+54805147 | None:intergenic |
GAGCTGTAATCATGAGTGAG+TGG | 0.681235 | 8_4:+54794646 | None:intergenic |
TCTATCACAGAACAACTGAA+GGG | 0.683170 | 8_4:-54794880 | Msa1334380:CDS |
CAATTGGAAGAGGAAGAACA+AGG | 0.693310 | 8_4:+54805643 | None:intergenic |
TAAGACGGCAAGCACCAGTG+AGG | 0.700208 | 8_4:+54804229 | None:intergenic |
GAATGAAGATGATCATCATG+CGG | 0.700277 | 8_4:-54805059 | Msa1334380:CDS |
AGATTGCTCTTGGATGACAG+AGG | 0.702438 | 8_4:-54794029 | Msa1334380:CDS |
GCATTGATATCAAAAGCCAA+AGG | 0.703583 | 8_4:+54794571 | None:intergenic |
ATCACTGTCACTGATAACGA+TGG | 0.706586 | 8_4:+54805297 | None:intergenic |
ATAGAATCAACATCGCTGAG+TGG | 0.706856 | 8_4:+54805610 | None:intergenic |
GAAGAGGTATAAGATTCATG+GGG | 0.710624 | 8_4:+54805409 | None:intergenic |
TTATCACACAGTTTCACGTG+GGG | 0.726712 | 8_4:-54805750 | None:intergenic |
GTGCTGCAACTTGACCAGTG+TGG | 0.740382 | 8_4:-54804330 | Msa1334380:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTATTTTATTTATTAT+AGG | - | chr8_4:54792813-54792832 | Msa1334380:intron | 0.0% |
!!! | ATTTTATTTATTTATTTTAA+AGG | - | chr8_4:54793693-54793712 | Msa1334380:intron | 0.0% |
!!! | TTTTATTTATTTATTTTAAA+GGG | - | chr8_4:54793694-54793713 | Msa1334380:intron | 0.0% |
!! | ATAAATTATATAAGTAAAGT+TGG | - | chr8_4:54791680-54791699 | Msa1334380:intron | 10.0% |
!! | TAAAAAATAAAACATTTAGA+TGG | - | chr8_4:54792334-54792353 | Msa1334380:intron | 10.0% |
!! | AAAAGGTAAAATAAAAAATT+AGG | - | chr8_4:54792942-54792961 | Msa1334380:intron | 10.0% |
!! | TATATAAATATGCTATAAAA+AGG | - | chr8_4:54793055-54793074 | Msa1334380:intron | 10.0% |
!! | AAATAAAAAGTAATAAAATC+TGG | - | chr8_4:54795053-54795072 | Msa1334380:intron | 10.0% |
!!! | AATTTTACAATAATTTTTTG+CGG | - | chr8_4:54795088-54795107 | Msa1334380:intron | 10.0% |
!!! | TTAGATTTTATTTTACTTAA+GGG | + | chr8_4:54796121-54796140 | None:intergenic | 10.0% |
!!! | TTTAGATTTTATTTTACTTA+AGG | + | chr8_4:54796122-54796141 | None:intergenic | 10.0% |
!!! | CGAATTTTAATTATATTTTT+TGG | - | chr8_4:54797360-54797379 | Msa1334380:intron | 10.0% |
!! | AAGAAAAATTATAGAAATAT+AGG | + | chr8_4:54797960-54797979 | None:intergenic | 10.0% |
!!! | AATTTATAGCATTTTTTTTT+TGG | - | chr8_4:54798321-54798340 | Msa1334380:intron | 10.0% |
!! | ACAAATTTATCAAATAATTA+AGG | + | chr8_4:54798869-54798888 | None:intergenic | 10.0% |
!!! | TAAAATATGAGTTTAAATTT+TGG | + | chr8_4:54800674-54800693 | None:intergenic | 10.0% |
!! | GAAAAAGTTAAATTATTATT+AGG | + | chr8_4:54804809-54804828 | None:intergenic | 10.0% |
!! | TCTATAATTATCATAATATT+TGG | + | chr8_4:54805085-54805104 | None:intergenic | 10.0% |
!!! | GATGATATTTTTTATTACTA+TGG | - | chr8_4:54790069-54790088 | Msa1334380:intron | 15.0% |
!!! | ATATTTTTTATTACTATGGT+CGG | - | chr8_4:54790073-54790092 | Msa1334380:intron | 15.0% |
!!! | AAATATTTTCACAAAGTAAA+CGG | + | chr8_4:54790624-54790643 | None:intergenic | 15.0% |
!!! | TAATCTAATTTTCTGAAATT+AGG | - | chr8_4:54792841-54792860 | Msa1334380:intron | 15.0% |
!!! | GAATGATTTTAAAATACAAA+AGG | - | chr8_4:54792925-54792944 | Msa1334380:intron | 15.0% |
!!! | TATATTTTGTCAAATTAATC+CGG | - | chr8_4:54793011-54793030 | Msa1334380:intron | 15.0% |
!! | AATATATTGTGAAGATATAA+AGG | - | chr8_4:54793357-54793376 | Msa1334380:intron | 15.0% |
!! | TCTAAATTATATTAGATGTT+CGG | - | chr8_4:54793552-54793571 | Msa1334380:intron | 15.0% |
!!! | ATAAAATTTAAAGTGATTTC+AGG | + | chr8_4:54793680-54793699 | None:intergenic | 15.0% |
!! | AAAAACATTTAAATATGTGT+TGG | + | chr8_4:54793733-54793752 | None:intergenic | 15.0% |
!! | TTGTATTCTCATTATTATTA+CGG | + | chr8_4:54794318-54794337 | None:intergenic | 15.0% |
!!! | ATAATAAACTTTTACAATGT+CGG | + | chr8_4:54794707-54794726 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | + | chr8_4:54795245-54795264 | None:intergenic | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | + | chr8_4:54795244-54795263 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr8_4:54795153-54795172 | None:intergenic | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | - | chr8_4:54795244-54795263 | Msa1334380:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | - | chr8_4:54795245-54795264 | Msa1334380:intron | 15.0% |
!! | TATACTAATAATATGTTGAT+TGG | - | chr8_4:54795553-54795572 | Msa1334380:intron | 15.0% |
!! | TAGATTCATTTACATAAAAT+TGG | + | chr8_4:54796990-54797009 | None:intergenic | 15.0% |
!! | TTCCATATGATAATTAAAAT+CGG | - | chr8_4:54797467-54797486 | Msa1334380:intron | 15.0% |
!! | AATTGAGAAAAATAAACAAA+TGG | - | chr8_4:54797647-54797666 | Msa1334380:intron | 15.0% |
!!! | TAGTATTTTTTTTTGCATTA+AGG | - | chr8_4:54798474-54798493 | Msa1334380:intron | 15.0% |
!!! | AGTATTTTTTTTTGCATTAA+GGG | - | chr8_4:54798475-54798494 | Msa1334380:intron | 15.0% |
!! | TCAACAATAGATAAATAAAA+TGG | + | chr8_4:54798543-54798562 | None:intergenic | 15.0% |
!!! | GATTTATTTTTCATTATCTT+TGG | - | chr8_4:54798561-54798580 | Msa1334380:intron | 15.0% |
!! | TTTATAGATAAATGTAGTAT+AGG | + | chr8_4:54798775-54798794 | None:intergenic | 15.0% |
!!! | TAAAACTTTCATTTTGAAAA+AGG | + | chr8_4:54799087-54799106 | None:intergenic | 15.0% |
!!! | TTTTTAAAGCTAAATTGTAT+TGG | - | chr8_4:54799115-54799134 | Msa1334380:intron | 15.0% |
!!! | GAAGAATTTACAAAATATTT+TGG | - | chr8_4:54800439-54800458 | Msa1334380:intron | 15.0% |
!! | TAAATCTGAATTTATATACT+AGG | + | chr8_4:54800856-54800875 | None:intergenic | 15.0% |
!! | TATACATTTATTTGTGTAAT+AGG | - | chr8_4:54800874-54800893 | Msa1334380:intron | 15.0% |
!! | TACAAATATTACAAGTAATA+TGG | + | chr8_4:54803063-54803082 | None:intergenic | 15.0% |
!! | TGAAATACAAACTTAAAATT+TGG | + | chr8_4:54803405-54803424 | None:intergenic | 15.0% |
!!! | TCTTTTAATATAATGACAAA+AGG | + | chr8_4:54805050-54805069 | None:intergenic | 15.0% |
!! | ATATTGATATAAATTAGAAC+TGG | - | chr8_4:54805694-54805713 | Msa1334380:CDS | 15.0% |
!! | AACTGAAAATCAAATTTCAT+TGG | - | chr8_4:54789198-54789217 | Msa1334380:intron | 20.0% |
!!! | TTGTGTGAATATATTTTAGT+TGG | - | chr8_4:54790036-54790055 | Msa1334380:intron | 20.0% |
!! | ATATACATTACTTTCTACAT+TGG | - | chr8_4:54790154-54790173 | Msa1334380:CDS | 20.0% |
!! | AAGATATCCTATAGTTAAAT+CGG | + | chr8_4:54790892-54790911 | None:intergenic | 20.0% |
!! | CGTTTATGTGATAATATATT+AGG | - | chr8_4:54791059-54791078 | Msa1334380:intron | 20.0% |
!! | ATGTGATAATATATTAGGAT+TGG | - | chr8_4:54791064-54791083 | Msa1334380:intron | 20.0% |
!!! | ACTATATCATTTTGTTTTCA+AGG | - | chr8_4:54791207-54791226 | Msa1334380:intron | 20.0% |
!! | TGGTAATAAGATATATAGAA+TGG | + | chr8_4:54791244-54791263 | None:intergenic | 20.0% |
!! | AAATATGACTATAATTTAGC+TGG | + | chr8_4:54791843-54791862 | None:intergenic | 20.0% |
!!! | AAAGAAATTAGTTGATTTGT+TGG | - | chr8_4:54792118-54792137 | Msa1334380:intron | 20.0% |
!! | AACTTTCTATGTATTCAAAA+AGG | + | chr8_4:54792477-54792496 | None:intergenic | 20.0% |
!!! | ATGAGAATAAAAAACTGTTT+TGG | - | chr8_4:54792987-54793006 | Msa1334380:intron | 20.0% |
!! | ATAGCATATTTATATAGCTA+TGG | + | chr8_4:54793051-54793070 | None:intergenic | 20.0% |
!!! | ATATATTTTTCCGACTTAAA+AGG | + | chr8_4:54793344-54793363 | None:intergenic | 20.0% |
!! | AGATATCATAAATCCATTTA+AGG | - | chr8_4:54793966-54793985 | Msa1334380:intron | 20.0% |
!!! | GAGATAAACTCATTTTTTTT+TGG | + | chr8_4:54794024-54794043 | None:intergenic | 20.0% |
!!! | TAAAAATGAAACTTGTTTTC+AGG | - | chr8_4:54794594-54794613 | Msa1334380:CDS | 20.0% |
!!! | AAAAATGAAACTTGTTTTCA+GGG | - | chr8_4:54794595-54794614 | Msa1334380:CDS | 20.0% |
!! | AAATGTCATAGTGATTATAT+AGG | + | chr8_4:54794738-54794757 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | - | chr8_4:54795182-54795201 | Msa1334380:intron | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | - | chr8_4:54795183-54795202 | Msa1334380:intron | 20.0% |
!!! | AACATTTGTAGAGATATTTT+AGG | + | chr8_4:54795324-54795343 | None:intergenic | 20.0% |
!!! | TACACACATTTTTTTTTTGA+AGG | - | chr8_4:54796176-54796195 | Msa1334380:intron | 20.0% |
!! | CTTATGAAGAGAATATTTAT+CGG | + | chr8_4:54796239-54796258 | None:intergenic | 20.0% |
!!! | TAAAATTGATTTTGGTGAAA+AGG | + | chr8_4:54797039-54797058 | None:intergenic | 20.0% |
!! | TTATCATATGGAACAATATT+TGG | + | chr8_4:54797460-54797479 | None:intergenic | 20.0% |
!! | TCCATATGATAATTAAAATC+GGG | - | chr8_4:54797468-54797487 | Msa1334380:intron | 20.0% |
!! | TCTTCTGTTACAAATATATT+CGG | - | chr8_4:54797671-54797690 | Msa1334380:intron | 20.0% |
!!! | AATTTTTTCTTCCTCTTTAT+AGG | - | chr8_4:54798017-54798036 | Msa1334380:intron | 20.0% |
!!! | TCTTTTGATCATTATTTACT+AGG | - | chr8_4:54798287-54798306 | Msa1334380:intron | 20.0% |
!! | AAAAATGCTATAAATTAGTG+TGG | + | chr8_4:54798317-54798336 | None:intergenic | 20.0% |
!!! | GTTTGTCCATTTTTTTTTTT+AGG | - | chr8_4:54798497-54798516 | Msa1334380:intron | 20.0% |
!! | GACAATCCTAAAAAAAAAAA+TGG | + | chr8_4:54798506-54798525 | None:intergenic | 20.0% |
!!! | TCCATTTATTTTATTGGTTA+TGG | - | chr8_4:54798713-54798732 | Msa1334380:intron | 20.0% |
!! | ACCATAACCAATAAAATAAA+TGG | + | chr8_4:54798717-54798736 | None:intergenic | 20.0% |
!! | AGTATAGGTTAAAAGAAAAA+AGG | + | chr8_4:54798760-54798779 | None:intergenic | 20.0% |
!! | ATGCAAAGAAATATTTGAAA+AGG | + | chr8_4:54798825-54798844 | None:intergenic | 20.0% |
!! | TTTATCTTTCTGTTAACAAT+AGG | - | chr8_4:54798973-54798992 | Msa1334380:intron | 20.0% |
!! | ATAGGAATATGGATATATTA+TGG | - | chr8_4:54798991-54799010 | Msa1334380:intron | 20.0% |
!! | AAAATTACCTACTTAATTAG+TGG | + | chr8_4:54799048-54799067 | None:intergenic | 20.0% |
!!! | AATTAAGTAGGTAATTTTAG+TGG | - | chr8_4:54799050-54799069 | Msa1334380:intron | 20.0% |
!!! | ACAATTTAGCTTTAAAAAGT+TGG | + | chr8_4:54799113-54799132 | None:intergenic | 20.0% |
!! | TATTTGTAAATCGAATTAAC+CGG | + | chr8_4:54799207-54799226 | None:intergenic | 20.0% |
!!! | TTTAATTAGTTTGAGTTTGA+TGG | + | chr8_4:54799433-54799452 | None:intergenic | 20.0% |
!!! | TACAAAATATTTTGGAAAGT+TGG | - | chr8_4:54800447-54800466 | Msa1334380:intron | 20.0% |
!! | TAATAAACATACCTCTAATA+TGG | + | chr8_4:54800479-54800498 | None:intergenic | 20.0% |
!! | TCAAATAGGAAATAAAAATG+TGG | + | chr8_4:54800558-54800577 | None:intergenic | 20.0% |
!!! | TATTTTGGAAAAATACTTGA+TGG | + | chr8_4:54801211-54801230 | None:intergenic | 20.0% |
!!! | TTGGTCATAATTACATATTT+TGG | + | chr8_4:54801226-54801245 | None:intergenic | 20.0% |
!! | ATATATTCTCTCATTAAACA+TGG | + | chr8_4:54802156-54802175 | None:intergenic | 20.0% |
!!! | TTCAATTTTTTCCCATTTAT+TGG | - | chr8_4:54803500-54803519 | Msa1334380:intron | 20.0% |
!! | AACTAGAAATTCAAAATGAA+TGG | + | chr8_4:54803533-54803552 | None:intergenic | 20.0% |
!! | CATGTTTATACATTTATTTG+TGG | - | chr8_4:54803579-54803598 | Msa1334380:CDS | 20.0% |
!! | TATACATTTATTTGTGGAAT+AGG | - | chr8_4:54803585-54803604 | Msa1334380:CDS | 20.0% |
!! | ATGAATTATATCATTACATG+TGG | - | chr8_4:54803982-54804001 | Msa1334380:CDS | 20.0% |
!!! | TCTTGTTTTATTTGATTTTC+AGG | - | chr8_4:54804386-54804405 | Msa1334380:intron | 20.0% |
!!! | TTATCATCACTTATTCATTT+TGG | - | chr8_4:54804416-54804435 | Msa1334380:intron | 20.0% |
!! | TTCACTTAATAACATTAAGA+AGG | - | chr8_4:54804893-54804912 | Msa1334380:CDS | 20.0% |
!! | ACAGGTAAATAAATCTATTA+AGG | - | chr8_4:54805414-54805433 | Msa1334380:CDS | 20.0% |
!! | CAGGTAAATAAATCTATTAA+GGG | - | chr8_4:54805415-54805434 | Msa1334380:CDS | 20.0% |
!!! | ATTTTGAATGTTAAGTACTT+TGG | - | chr8_4:54805530-54805549 | Msa1334380:CDS | 20.0% |
!! | AATATATAGATCCTGAAATT+TGG | - | chr8_4:54805729-54805748 | Msa1334380:CDS | 20.0% |
! | TTCTATCACAAAACAACTAA+AGG | - | chr8_4:54788853-54788872 | Msa1334380:CDS | 25.0% |
! | TCTATCACAAAACAACTAAA+GGG | - | chr8_4:54788854-54788873 | Msa1334380:CDS | 25.0% |
! | GATTATACCAATTTCTTTGT+CGG | + | chr8_4:54788891-54788910 | None:intergenic | 25.0% |
!!! | TGATACTGATTCTTTTTACA+TGG | - | chr8_4:54789006-54789025 | Msa1334380:intron | 25.0% |
!! | CTTAAAACTCTACAACTTTT+TGG | - | chr8_4:54789075-54789094 | Msa1334380:CDS | 25.0% |
! | TTGTTAAGGAATCCTTTATT+TGG | - | chr8_4:54789533-54789552 | Msa1334380:intron | 25.0% |
!! | TGTTAAGGAATCCTTTATTT+GGG | - | chr8_4:54789534-54789553 | Msa1334380:intron | 25.0% |
! | GAAGAATTCACTAAATGTTT+CGG | - | chr8_4:54789808-54789827 | Msa1334380:intron | 25.0% |
! | TACTTGTTTCATATAGCATT+TGG | - | chr8_4:54789872-54789891 | Msa1334380:intron | 25.0% |
! | ATAAAAGACATATGAATGAC+AGG | + | chr8_4:54790004-54790023 | None:intergenic | 25.0% |
!!! | ATATGCTAGTCTTAATATTC+TGG | - | chr8_4:54790319-54790338 | Msa1334380:intron | 25.0% |
! | ATAAACTTATCACAAACAGT+TGG | + | chr8_4:54790470-54790489 | None:intergenic | 25.0% |
!! | GAAATTCTAGCACAAATTTT+AGG | + | chr8_4:54790660-54790679 | None:intergenic | 25.0% |
!!! | TTTTAAGTGAGTTATTGTGA+TGG | - | chr8_4:54790704-54790723 | Msa1334380:CDS | 25.0% |
! | AAACTTATCATTTCGTCTAT+TGG | - | chr8_4:54790759-54790778 | Msa1334380:CDS | 25.0% |
!! | AAATTGACCGATTTAACTAT+AGG | - | chr8_4:54790882-54790901 | Msa1334380:intron | 25.0% |
!!! | GTAATTTCTAGCTTTTTAGT+AGG | - | chr8_4:54791028-54791047 | Msa1334380:intron | 25.0% |
!! | GAGTATTGCTATTATATGTA+TGG | - | chr8_4:54791089-54791108 | Msa1334380:intron | 25.0% |
!! | TTGCTATTATATGTATGGAT+TGG | - | chr8_4:54791094-54791113 | Msa1334380:intron | 25.0% |
!!! | ATTATATGTATGGATTGGTA+TGG | - | chr8_4:54791099-54791118 | Msa1334380:intron | 25.0% |
!!! | TAATTTTTCTAGTTCGAGAA+TGG | + | chr8_4:54791182-54791201 | None:intergenic | 25.0% |
!!! | ATTTTGTTTTCAAGGTTTTG+AGG | - | chr8_4:54791215-54791234 | Msa1334380:intron | 25.0% |
! | TTATTCAGCAATTGGAATTT+AGG | + | chr8_4:54791332-54791351 | None:intergenic | 25.0% |
! | AAGTTAAGTTATTCAGCAAT+TGG | + | chr8_4:54791340-54791359 | None:intergenic | 25.0% |
! | TTCACTTAACAACATTAAGA+AGG | - | chr8_4:54791428-54791447 | Msa1334380:intron | 25.0% |
! | AAAATTGTAACATGTTGTCA+AGG | - | chr8_4:54791532-54791551 | Msa1334380:intron | 25.0% |
! | AGATAAACTATCATAAGAGT+TGG | + | chr8_4:54791655-54791674 | None:intergenic | 25.0% |
!! | GAATATTGATTAGCTATTTG+AGG | - | chr8_4:54791769-54791788 | Msa1334380:intron | 25.0% |
!!! | TTTTGAGTGTCTTTAACATT+TGG | - | chr8_4:54791871-54791890 | Msa1334380:intron | 25.0% |
!! | TTTAACATTTGGTTTAATCC+AGG | - | chr8_4:54791882-54791901 | Msa1334380:intron | 25.0% |
!! | GTAACAAATGTTTTTCTCAA+CGG | - | chr8_4:54792171-54792190 | Msa1334380:intron | 25.0% |
!! | TAACAAATGTTTTTCTCAAC+GGG | - | chr8_4:54792172-54792191 | Msa1334380:intron | 25.0% |
! | TAATATCAAAATCTACTCTG+AGG | + | chr8_4:54792301-54792320 | None:intergenic | 25.0% |
! | TTTCTTCAAGAAGAAGAAAA+TGG | + | chr8_4:54792619-54792638 | None:intergenic | 25.0% |
!! | TGTAATTTGAAATCCATACA+TGG | + | chr8_4:54792731-54792750 | None:intergenic | 25.0% |
! | ATGTATGGATTTCAAATTAC+AGG | - | chr8_4:54792730-54792749 | Msa1334380:intron | 25.0% |
! | TGTATGGATTTCAAATTACA+GGG | - | chr8_4:54792731-54792750 | Msa1334380:intron | 25.0% |
!! | ATAGTAGAATTTTGCGTATT+GGG | + | chr8_4:54793293-54793312 | None:intergenic | 25.0% |
!!! | AATTCAGAATCCTTTTAAGT+CGG | - | chr8_4:54793331-54793350 | Msa1334380:intron | 25.0% |
!! | ATTACCTCTTTTGTGTTTTT+AGG | - | chr8_4:54793640-54793659 | Msa1334380:intron | 25.0% |
! | TGATTTCAGGATCTTAAAAA+AGG | + | chr8_4:54793667-54793686 | None:intergenic | 25.0% |
!!! | ATTTATTTTAAAGGGCTTAG+TGG | - | chr8_4:54793702-54793721 | Msa1334380:intron | 25.0% |
! | TTTATGATATCTCGATGAAT+TGG | + | chr8_4:54793958-54793977 | None:intergenic | 25.0% |
! | AATACAAAAAATTCACCCTT+AGG | - | chr8_4:54794331-54794350 | Msa1334380:CDS | 25.0% |
!! | GCTCTTGTTTAAAATGTTTA+TGG | + | chr8_4:54794627-54794646 | None:intergenic | 25.0% |
!! | ATCACTATGACATTTTTCTA+AGG | - | chr8_4:54794743-54794762 | Msa1334380:CDS | 25.0% |
!! | GAAACATAATTAACCCTTTT+AGG | + | chr8_4:54794774-54794793 | None:intergenic | 25.0% |
!!! | TACAAGGTAGCTATTTTATA+GGG | + | chr8_4:54794801-54794820 | None:intergenic | 25.0% |
!!! | TTACAAGGTAGCTATTTTAT+AGG | + | chr8_4:54794802-54794821 | None:intergenic | 25.0% |
!!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr8_4:54794893-54794912 | None:intergenic | 25.0% |
!!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr8_4:54794894-54794913 | None:intergenic | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | - | chr8_4:54795216-54795235 | Msa1334380:intron | 25.0% |
!!! | TTGTAGAGATATTTTAGGAA+GGG | + | chr8_4:54795319-54795338 | None:intergenic | 25.0% |
!!! | TTTGTAGAGATATTTTAGGA+AGG | + | chr8_4:54795320-54795339 | None:intergenic | 25.0% |
! | TGCATGATTTAATTGAATGT+AGG | - | chr8_4:54795349-54795368 | Msa1334380:intron | 25.0% |
! | ATTATTACAATCAGATGTTC+TGG | + | chr8_4:54795411-54795430 | None:intergenic | 25.0% |
!! | CTAATAATATGTTGATTGGA+TGG | - | chr8_4:54795557-54795576 | Msa1334380:intron | 25.0% |
! | TAGTCTTTCTTTCTATAGTA+AGG | - | chr8_4:54795888-54795907 | Msa1334380:intron | 25.0% |
! | GTATAAAGAAAGAATGTTGA+AGG | - | chr8_4:54795975-54795994 | Msa1334380:intron | 25.0% |
!!! | ATATGATTTTGTGGTTTGTT+TGG | - | chr8_4:54796030-54796049 | Msa1334380:intron | 25.0% |
!!! | AAAGATTATATTTTGGCATG+TGG | - | chr8_4:54796321-54796340 | Msa1334380:intron | 25.0% |
! | AATCTAAATGACCAATTTGT+GGG | + | chr8_4:54796827-54796846 | None:intergenic | 25.0% |
! | TAATCTAAATGACCAATTTG+TGG | + | chr8_4:54796828-54796847 | None:intergenic | 25.0% |
!!! | GCACTTTGTAAAATTGATTT+TGG | + | chr8_4:54797047-54797066 | None:intergenic | 25.0% |
!! | AGTGCATGAAATGAATTTTA+AGG | - | chr8_4:54797062-54797081 | Msa1334380:intron | 25.0% |
!! | GTGCATGAAATGAATTTTAA+GGG | - | chr8_4:54797063-54797082 | Msa1334380:intron | 25.0% |
!! | TGCATGAAATGAATTTTAAG+GGG | - | chr8_4:54797064-54797083 | Msa1334380:intron | 25.0% |
! | CCATATGATAATTAAAATCG+GGG | - | chr8_4:54797469-54797488 | Msa1334380:intron | 25.0% |
! | TATGCAAAATATCTATCCTT+AGG | - | chr8_4:54797492-54797511 | Msa1334380:intron | 25.0% |
! | CTTCTGTTACAAATATATTC+GGG | - | chr8_4:54797672-54797691 | Msa1334380:intron | 25.0% |
! | GTAAAGCAAAATTACCAAAA+AGG | + | chr8_4:54797722-54797741 | None:intergenic | 25.0% |
!!! | TTTTGGTAATTTTGCTTTAC+TGG | - | chr8_4:54797722-54797741 | Msa1334380:intron | 25.0% |
! | TATCATGTAATCCTATAAAG+AGG | + | chr8_4:54798031-54798050 | None:intergenic | 25.0% |
! | CTTTATAGGATTACATGATA+TGG | - | chr8_4:54798031-54798050 | Msa1334380:intron | 25.0% |
! | TGTTCTTTCTAACCTTAATA+AGG | + | chr8_4:54798102-54798121 | None:intergenic | 25.0% |
! | TATATATATATGTGTGTGTG+TGG | - | chr8_4:54798127-54798146 | Msa1334380:intron | 25.0% |
! | ATATATATATGTGTGTGTGT+GGG | - | chr8_4:54798128-54798147 | Msa1334380:intron | 25.0% |
!!! | GGTTTATCGATTTATCTATT+TGG | - | chr8_4:54798175-54798194 | Msa1334380:intron | 25.0% |
! | AGCAGTTTGTCAAAAAAAAA+AGG | + | chr8_4:54798239-54798258 | None:intergenic | 25.0% |
!!! | TTTTTTTTGGTAGATTGTGT+TGG | - | chr8_4:54798334-54798353 | Msa1334380:intron | 25.0% |
!! | GTTCAAAAAAGCACAAATTA+CGG | - | chr8_4:54798436-54798455 | Msa1334380:intron | 25.0% |
! | TAAAATGGCCAAAAGAAAAA+TGG | + | chr8_4:54798528-54798547 | None:intergenic | 25.0% |
!!! | TATACTTTTTTGTGAAGTGT+AGG | - | chr8_4:54798628-54798647 | Msa1334380:intron | 25.0% |
!!! | CTTGGTTCCATTTATTTTAT+TGG | - | chr8_4:54798707-54798726 | Msa1334380:intron | 25.0% |
! | TTCTGTTAACAATAGGAATA+TGG | - | chr8_4:54798980-54798999 | Msa1334380:intron | 25.0% |
! | ATATATTATGGTGAACAAAG+TGG | - | chr8_4:54799003-54799022 | Msa1334380:intron | 25.0% |
! | TAATCACACGTTAAAAAATC+CGG | - | chr8_4:54799185-54799204 | Msa1334380:intron | 25.0% |
! | TATGTGACATTGTTATCATA+TGG | + | chr8_4:54799324-54799343 | None:intergenic | 25.0% |
! | TCAATGTCATGATAAATAGT+TGG | - | chr8_4:54799358-54799377 | Msa1334380:intron | 25.0% |
! | CAAGAATAAGAAACAGAAAA+TGG | - | chr8_4:54799499-54799518 | Msa1334380:intron | 25.0% |
! | ATAGAAGTTATGTCATCAAT+GGG | + | chr8_4:54799551-54799570 | None:intergenic | 25.0% |
! | TCATCTCTATGAATATGATT+GGG | + | chr8_4:54799662-54799681 | None:intergenic | 25.0% |
! | TTCATCTCTATGAATATGAT+TGG | + | chr8_4:54799663-54799682 | None:intergenic | 25.0% |
!!! | ATCAATGTCATTGATAATGA+TGG | + | chr8_4:54799825-54799844 | None:intergenic | 25.0% |
!! | TTATCAATGACATTGATGAT+CGG | - | chr8_4:54799828-54799847 | Msa1334380:intron | 25.0% |
! | TCAGAGAATAAAGAAAAAGA+TGG | - | chr8_4:54800043-54800062 | Msa1334380:intron | 25.0% |
! | AGTTACTAAAAGCAACAAAA+GGG | - | chr8_4:54800138-54800157 | Msa1334380:intron | 25.0% |
! | TCGAATGACAAAATTCAAAT+AGG | + | chr8_4:54800572-54800591 | None:intergenic | 25.0% |
!! | TGAATTTTGTCATTCGAATT+TGG | - | chr8_4:54800575-54800594 | Msa1334380:intron | 25.0% |
!! | GAATTTTGTCATTCGAATTT+GGG | - | chr8_4:54800576-54800595 | Msa1334380:intron | 25.0% |
!! | ATATGCATAATCCTTAGTTT+TGG | + | chr8_4:54803107-54803126 | None:intergenic | 25.0% |
! | AATTACACGTAATAGTTGTA+AGG | + | chr8_4:54800991-54801010 | None:intergenic | 25.0% |
! | TACAACTATTACGTGTAATT+AGG | - | chr8_4:54800991-54801010 | Msa1334380:intron | 25.0% |
! | ACAGATATTGATGGAAAAAT+AGG | + | chr8_4:54801116-54801135 | None:intergenic | 25.0% |
! | AAAGGATTGTTTGAAAAAGT+TGG | - | chr8_4:54801728-54801747 | Msa1334380:intron | 25.0% |
!! | TTTATCTTTGTTACTTCTGT+CGG | + | chr8_4:54801831-54801850 | None:intergenic | 25.0% |
! | AAGTAACAAAGATAAAACGA+AGG | - | chr8_4:54801835-54801854 | Msa1334380:intron | 25.0% |
! | TCTCTTTAAACATGAAACAA+TGG | - | chr8_4:54801958-54801977 | Msa1334380:intron | 25.0% |
! | CTCTTTAAACATGAAACAAT+GGG | - | chr8_4:54801959-54801978 | Msa1334380:intron | 25.0% |
! | TCAAATTCAAAAGTTGAGAT+CGG | - | chr8_4:54802044-54802063 | Msa1334380:intron | 25.0% |
! | AATGATAGCTTCATTACTAA+AGG | - | chr8_4:54802227-54802246 | Msa1334380:CDS | 25.0% |
! | ATGATAGCTTCATTACTAAA+GGG | - | chr8_4:54802228-54802247 | Msa1334380:CDS | 25.0% |
! | TAAAAAAAATTAGACATGCC+AGG | + | chr8_4:54802432-54802451 | None:intergenic | 25.0% |
!!! | ATTTTGGGAAAAATACTTGA+TGG | - | chr8_4:54802838-54802857 | Msa1334380:intron | 25.0% |
! | GTAATATTTGTAGAGATACA+TGG | - | chr8_4:54803071-54803090 | Msa1334380:CDS | 25.0% |
!! | ATATGCATAATCCTTAGTTT+TGG | - | chr8_4:54803107-54803126 | Msa1334380:intron | 25.0% |
!! | TCCATATTTTTCTTTCCTAT+TGG | - | chr8_4:54803240-54803259 | Msa1334380:intron | 25.0% |
! | TCCAATAGGAAAGAAAAATA+TGG | + | chr8_4:54803244-54803263 | None:intergenic | 25.0% |
! | ATGGCAAAATTCCAATAAAT+GGG | + | chr8_4:54803514-54803533 | None:intergenic | 25.0% |
! | AATGGCAAAATTCCAATAAA+TGG | + | chr8_4:54803515-54803534 | None:intergenic | 25.0% |
! | ATATACATTACCTTGTACAT+TGG | - | chr8_4:54803645-54803664 | Msa1334380:intron | 25.0% |
!! | TTTTTCCAGTCTTGATATTT+TGG | - | chr8_4:54803810-54803829 | Msa1334380:intron | 25.0% |
!!! | TTCATTAGGATCATTTTTGA+AGG | - | chr8_4:54803837-54803856 | Msa1334380:intron | 25.0% |
! | ATGAATTTATCAGAAACAGT+AGG | + | chr8_4:54803961-54803980 | None:intergenic | 25.0% |
!!! | ACATTAATGAGCTTGTTTTA+AGG | - | chr8_4:54804010-54804029 | Msa1334380:CDS | 25.0% |
!!! | CATTAATGAGCTTGTTTTAA+GGG | - | chr8_4:54804011-54804030 | Msa1334380:CDS | 25.0% |
!! | TAAGTACTATTTGAGCTTTT+CGG | - | chr8_4:54804113-54804132 | Msa1334380:intron | 25.0% |
! | TACTTCTCAGTTTAATCTAT+TGG | - | chr8_4:54804176-54804195 | Msa1334380:CDS | 25.0% |
! | AACCATTAGAAAATTTCTCA+AGG | + | chr8_4:54804500-54804519 | None:intergenic | 25.0% |
! | GACTATTGCTAATATTTGTA+TGG | - | chr8_4:54804598-54804617 | Msa1334380:intron | 25.0% |
!!! | GTAATTGATTTTCTAGCATT+TGG | - | chr8_4:54804624-54804643 | Msa1334380:CDS | 25.0% |
!!! | TATCATGAGTAACTTTTTCA+AGG | - | chr8_4:54804649-54804668 | Msa1334380:CDS | 25.0% |
! | TGGTAATAAGATATATGCAA+TGG | + | chr8_4:54804686-54804705 | None:intergenic | 25.0% |
! | ATATCACACAGATATAAACT+TGG | + | chr8_4:54804706-54804725 | None:intergenic | 25.0% |
! | TAGGCAATTGAAATTTATGA+AGG | + | chr8_4:54804790-54804809 | None:intergenic | 25.0% |
! | TTGTATGTGCATAATATGAA+AGG | - | chr8_4:54805003-54805022 | Msa1334380:CDS | 25.0% |
! | TCTTGAGTATTACTAATTTC+AGG | - | chr8_4:54805194-54805213 | Msa1334380:CDS | 25.0% |
!!! | TTTTGAGTGTCTATTACATT+TGG | - | chr8_4:54805229-54805248 | Msa1334380:CDS | 25.0% |
!!! | ATCTAAGGTATGCAAATTTT+TGG | + | chr8_4:54791944-54791963 | None:intergenic | 25.0% |
! | TTTCTTCGTACAAAGATTTA+AGG | + | chr8_4:54805489-54805508 | None:intergenic | 25.0% |
!!! | AAGAAATCAGTTGTTTTGTT+GGG | - | chr8_4:54805503-54805522 | Msa1334380:CDS | 25.0% |
! | TCTTTGATATGTTGCAATAA+AGG | + | chr8_4:54805625-54805644 | None:intergenic | 25.0% |
!!! | TTTGGGTATTTTGATTGGTT+AGG | + | chr8_4:54788742-54788761 | None:intergenic | 30.0% |
!!! | GGTTTTTTGGGTATTTTGAT+TGG | + | chr8_4:54788747-54788766 | None:intergenic | 30.0% |
!! | AACATTTGATGATGATGATG+GGG | + | chr8_4:54788924-54788943 | None:intergenic | 30.0% |
!! | GAACATTTGATGATGATGAT+GGG | + | chr8_4:54788925-54788944 | None:intergenic | 30.0% |
! | AGAAGAGGTATAAGATTCAT+GGG | + | chr8_4:54789041-54789060 | None:intergenic | 30.0% |
! | AAGAAGAGGTATAAGATTCA+TGG | + | chr8_4:54789042-54789061 | None:intergenic | 30.0% |
! | TACAACTTTTTGGATCCAAA+AGG | - | chr8_4:54789085-54789104 | Msa1334380:CDS | 30.0% |
TTATCATCATCATCAATGAG+TGG | + | chr8_4:54789118-54789137 | None:intergenic | 30.0% | |
ACATGAAATTGACGATAACT+TGG | - | chr8_4:54789414-54789433 | Msa1334380:intron | 30.0% | |
ATTGCCAAAAGCAAGAAAAA+AGG | - | chr8_4:54789508-54789527 | Msa1334380:intron | 30.0% | |
TTGCCAAAAGCAAGAAAAAA+GGG | - | chr8_4:54789509-54789528 | Msa1334380:intron | 30.0% | |
TTTCTTGAACTACTTCTAAG+TGG | - | chr8_4:54789739-54789758 | Msa1334380:intron | 30.0% | |
TTCTTGAACTACTTCTAAGT+GGG | - | chr8_4:54789740-54789759 | Msa1334380:intron | 30.0% | |
TAATGTACATACCTCTAGTA+TGG | + | chr8_4:54789848-54789867 | None:intergenic | 30.0% | |
ATTGTTCGATCTTGATCAAA+TGG | - | chr8_4:54789936-54789955 | Msa1334380:intron | 30.0% | |
ACATATGAATGACAGGAATT+TGG | + | chr8_4:54789997-54790016 | None:intergenic | 30.0% | |
GGAACATTTATTTGTGGAAT+AGG | - | chr8_4:54790094-54790113 | Msa1334380:CDS | 30.0% | |
!! | GGAACATTGACTTAGATTTA+TGG | + | chr8_4:54790291-54790310 | None:intergenic | 30.0% |
! | AATATTCTGGCTGATTCATT+AGG | - | chr8_4:54790332-54790351 | Msa1334380:intron | 30.0% |
! | TCCTTAGTCTTTCATTCTTA+AGG | - | chr8_4:54790596-54790615 | Msa1334380:CDS | 30.0% |
GCTAGAATTTCTTGTTAACA+AGG | - | chr8_4:54790669-54790688 | Msa1334380:CDS | 30.0% | |
CTCTTGATCTTATGAACTTA+TGG | - | chr8_4:54790859-54790878 | Msa1334380:intron | 30.0% | |
!!! | TGGTATGGATTTTTTGCATT+TGG | - | chr8_4:54791114-54791133 | Msa1334380:intron | 30.0% |
!!! | TTTTTTGCATTTGGAATGTC+AGG | - | chr8_4:54791123-54791142 | Msa1334380:intron | 30.0% |
AATTTGACAGACAATGAGTT+TGG | - | chr8_4:54791979-54791998 | Msa1334380:intron | 30.0% | |
! | CAATGAGTTTGGTTTAATTG+TGG | - | chr8_4:54791990-54792009 | Msa1334380:intron | 30.0% |
! | CTAAGGTCACTTAAACTTTT+CGG | - | chr8_4:54792027-54792046 | Msa1334380:intron | 30.0% |
TTGAATGTTACTACTATTGC+AGG | - | chr8_4:54792149-54792168 | Msa1334380:intron | 30.0% | |
AACTTAGAGATTCAGATCAT+TGG | - | chr8_4:54792201-54792220 | Msa1334380:intron | 30.0% | |
ACTTAGAGATTCAGATCATT+GGG | - | chr8_4:54792202-54792221 | Msa1334380:intron | 30.0% | |
TCTTTGATATGCTGCAATAA+AGG | + | chr8_4:54792240-54792259 | None:intergenic | 30.0% | |
! | GCAGATTTTATTATGTACAC+AGG | - | chr8_4:54792520-54792539 | Msa1334380:intron | 30.0% |
TGTATTATGTATCTCAATCC+AGG | + | chr8_4:54792569-54792588 | None:intergenic | 30.0% | |
! | TTAGATTTTATTGCGTACAC+TGG | - | chr8_4:54792589-54792608 | Msa1334380:intron | 30.0% |
!! | GAGTTTGTTGTATTCTAAGT+GGG | + | chr8_4:54793241-54793260 | None:intergenic | 30.0% |
!! | AGAGTTTGTTGTATTCTAAG+TGG | + | chr8_4:54793242-54793261 | None:intergenic | 30.0% |
! | GATAGTAGAATTTTGCGTAT+TGG | + | chr8_4:54793294-54793313 | None:intergenic | 30.0% |
GATAATCTAACCATGAACAA+TGG | - | chr8_4:54793439-54793458 | Msa1334380:intron | 30.0% | |
! | TCTTTTCAAACCATTGTTCA+TGG | + | chr8_4:54793452-54793471 | None:intergenic | 30.0% |
TTAGAGTTCAACTCCTTAAA+TGG | + | chr8_4:54793982-54794001 | None:intergenic | 30.0% | |
TACTACTTGTGCTACATAAT+TGG | - | chr8_4:54794052-54794071 | Msa1334380:CDS | 30.0% | |
!!! | GCAACATGCACATTTTTTTT+TGG | + | chr8_4:54794087-54794106 | None:intergenic | 30.0% |
TGAACGTTTGTAAAAAAGAG+TGG | - | chr8_4:54794112-54794131 | Msa1334380:CDS | 30.0% | |
GAACGTTTGTAAAAAAGAGT+GGG | - | chr8_4:54794113-54794132 | Msa1334380:CDS | 30.0% | |
ATGTTGTATCAAACTGTGTT+AGG | - | chr8_4:54794137-54794156 | Msa1334380:CDS | 30.0% | |
TTCACAAGGAATGGAAATAA+CGG | + | chr8_4:54794171-54794190 | None:intergenic | 30.0% | |
!!! | TATTTTGAGTTCACAAGGAA+TGG | + | chr8_4:54794180-54794199 | None:intergenic | 30.0% |
ATTCCTTGTGAACTCAAAAT+AGG | - | chr8_4:54794179-54794198 | Msa1334380:CDS | 30.0% | |
GATCCAACATAAACGTAAAA+CGG | - | chr8_4:54794201-54794220 | Msa1334380:CDS | 30.0% | |
ATCCAACATAAACGTAAAAC+GGG | - | chr8_4:54794202-54794221 | Msa1334380:CDS | 30.0% | |
TGAAAAACCTTCTCAATATG+AGG | - | chr8_4:54794252-54794271 | Msa1334380:CDS | 30.0% | |
GAAAAACCTTCTCAATATGA+GGG | - | chr8_4:54794253-54794272 | Msa1334380:CDS | 30.0% | |
!!! | TTTTTTCCCTCATATTGAGA+AGG | + | chr8_4:54794262-54794281 | None:intergenic | 30.0% |
TCTCACAAATAAACTCTATG+AGG | - | chr8_4:54794368-54794387 | Msa1334380:CDS | 30.0% | |
TCTCTCTTAAAATAAGACCA+TGG | + | chr8_4:54794486-54794505 | None:intergenic | 30.0% | |
!! | TTTCTAAGGTAGTTCCTAAA+AGG | - | chr8_4:54794757-54794776 | Msa1334380:CDS | 30.0% |
!! | TTCTAAGGTAGTTCCTAAAA+GGG | - | chr8_4:54794758-54794777 | Msa1334380:CDS | 30.0% |
CAAGATTAGAACACTATGAA+AGG | - | chr8_4:54794956-54794975 | Msa1334380:CDS | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | - | chr8_4:54795215-54795234 | Msa1334380:intron | 30.0% | |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr8_4:54795275-54795294 | Msa1334380:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr8_4:54795276-54795295 | Msa1334380:intron | 30.0% |
TTTATTTGTGAAGAGAGAGA+AGG | + | chr8_4:54795682-54795701 | None:intergenic | 30.0% | |
TGTGACCAAAGAAAATTTCT+TGG | - | chr8_4:54795755-54795774 | Msa1334380:intron | 30.0% | |
ATAGAAAGAAAGACTATAGC+TGG | + | chr8_4:54795884-54795903 | None:intergenic | 30.0% | |
! | TGGAAAGTGATATGATTTTG+TGG | - | chr8_4:54796021-54796040 | Msa1334380:intron | 30.0% |
CAAATTTGAGCAGAAAGTTT+CGG | + | chr8_4:54796380-54796399 | None:intergenic | 30.0% | |
!!! | AGGAAAGATCACTTTTTACT+GGG | + | chr8_4:54796428-54796447 | None:intergenic | 30.0% |
!!! | AAGGAAAGATCACTTTTTAC+TGG | + | chr8_4:54796429-54796448 | None:intergenic | 30.0% |
GATTTCAAGAAACTTTCCAT+CGG | + | chr8_4:54796472-54796491 | None:intergenic | 30.0% | |
ATCTAAATGACCAATTTGTG+GGG | + | chr8_4:54796826-54796845 | None:intergenic | 30.0% | |
AGTAAAATTGCACAATTGAG+TGG | + | chr8_4:54796912-54796931 | None:intergenic | 30.0% | |
TTGCAATTTATCTGCATTCA+GGG | + | chr8_4:54797137-54797156 | None:intergenic | 30.0% | |
TTTGCAATTTATCTGCATTC+AGG | + | chr8_4:54797138-54797157 | None:intergenic | 30.0% | |
ACTAACAAAGTCTACATTCA+GGG | + | chr8_4:54797166-54797185 | None:intergenic | 30.0% | |
TTTGCATATTATCTGCATTC+AGG | - | chr8_4:54797286-54797305 | Msa1334380:intron | 30.0% | |
TTGCATATTATCTGCATTCA+GGG | - | chr8_4:54797287-54797306 | Msa1334380:intron | 30.0% | |
! | TAATTTGGAGTTCTAGTAAG+AGG | - | chr8_4:54797420-54797439 | Msa1334380:intron | 30.0% |
!!! | CCCCGATTTTAATTATCATA+TGG | + | chr8_4:54797472-54797491 | None:intergenic | 30.0% |
ATCAAGTATTTGTGCATAAG+TGG | + | chr8_4:54797531-54797550 | None:intergenic | 30.0% | |
TGTTTCATGCATTAAGAATG+AGG | - | chr8_4:54797588-54797607 | Msa1334380:intron | 30.0% | |
AAATCTTCACACTAGACTTA+GGG | + | chr8_4:54797852-54797871 | None:intergenic | 30.0% | |
TAATCCACCAAGTTATTTGT+GGG | + | chr8_4:54797914-54797933 | None:intergenic | 30.0% | |
ATAAATCGATAAACCCCAAA+TGG | + | chr8_4:54798170-54798189 | None:intergenic | 30.0% | |
CTTAATAGCAAAGAAAGCAA+TGG | + | chr8_4:54798416-54798435 | None:intergenic | 30.0% | |
!! | CATTGCTTTCTTTGCTATTA+AGG | - | chr8_4:54798414-54798433 | Msa1334380:intron | 30.0% |
!! | AGGATTGTCCATTTTTCTTT+TGG | - | chr8_4:54798517-54798536 | Msa1334380:intron | 30.0% |
!! | TAGACTATTTCTGACTTGTA+AGG | - | chr8_4:54798934-54798953 | Msa1334380:intron | 30.0% |
ATCGAATCCACTAATTAAGT+AGG | - | chr8_4:54799038-54799057 | Msa1334380:intron | 30.0% | |
! | TTTTATCAACCAATTTAGCG+CGG | - | chr8_4:54799471-54799490 | Msa1334380:intron | 30.0% |
GATAGAAGTTATGTCATCAA+TGG | + | chr8_4:54799552-54799571 | None:intergenic | 30.0% | |
ATTCAGGAACAAATGTTGAT+GGG | + | chr8_4:54799637-54799656 | None:intergenic | 30.0% | |
ACCAGAAAATCAAATACCTT+TGG | - | chr8_4:54799859-54799878 | Msa1334380:intron | 30.0% | |
! | ACAATGATGATTTTGCGATT+TGG | - | chr8_4:54799936-54799955 | Msa1334380:intron | 30.0% |
! | TAAAGAAAAAGATGGTGATG+TGG | - | chr8_4:54800051-54800070 | Msa1334380:intron | 30.0% |
GAGTTACTAAAAGCAACAAA+AGG | - | chr8_4:54800137-54800156 | Msa1334380:intron | 30.0% | |
GTTACTAAAAGCAACAAAAG+GGG | - | chr8_4:54800139-54800158 | Msa1334380:intron | 30.0% | |
TTACTAAAAGCAACAAAAGG+GGG | - | chr8_4:54800140-54800159 | Msa1334380:intron | 30.0% | |
TTTCTTGAACTACTTCTAAG+TGG | - | chr8_4:54789739-54789758 | Msa1334380:intron | 30.0% | |
TTCTTGAACTACTTCTAAGT+GGG | - | chr8_4:54789740-54789759 | Msa1334380:intron | 30.0% | |
TGTTTCACATATGTAACACT+TGG | - | chr8_4:54800507-54800526 | Msa1334380:intron | 30.0% | |
! | TAAATTTTGGATCACCAATG+TGG | + | chr8_4:54800661-54800680 | None:intergenic | 30.0% |
! | CAACTTTTTATGTCCTATGT+AGG | - | chr8_4:54800771-54800790 | Msa1334380:intron | 30.0% |
TAATGACAGAATTCCTACAT+AGG | + | chr8_4:54800787-54800806 | None:intergenic | 30.0% | |
AATTTATATACTAGGCCCTT+AGG | + | chr8_4:54800848-54800867 | None:intergenic | 30.0% | |
!!! | TAATCCTTAGTTTTGGTTGA+AGG | + | chr8_4:54800940-54800959 | None:intergenic | 30.0% |
AGGTAGCATCAAAAACTAAA+AGG | - | chr8_4:54801011-54801030 | Msa1334380:intron | 30.0% | |
ATCAAACAGAGAAAACTTAG+AGG | + | chr8_4:54801049-54801068 | None:intergenic | 30.0% | |
AAGAACAATGATAGTAATCC+TGG | + | chr8_4:54801147-54801166 | None:intergenic | 30.0% | |
TTGGACAAAACATATTCTAG+TGG | + | chr8_4:54801171-54801190 | None:intergenic | 30.0% | |
GGAAAATCTTGATTCAGATT+TGG | + | chr8_4:54801190-54801209 | None:intergenic | 30.0% | |
TTGCAACATGATTAGGATTT+AGG | - | chr8_4:54801478-54801497 | Msa1334380:intron | 30.0% | |
CTTCATTCTGATTCTATTAG+TGG | + | chr8_4:54801597-54801616 | None:intergenic | 30.0% | |
CACTAATAGAATCAGAATGA+AGG | - | chr8_4:54801595-54801614 | Msa1334380:intron | 30.0% | |
TGACAAAGAACAATTACTTC+TGG | - | chr8_4:54801650-54801669 | Msa1334380:intron | 30.0% | |
! | GTGCTAGCTTCATTAATAAA+GGG | + | chr8_4:54801876-54801895 | None:intergenic | 30.0% |
! | AGTGCTAGCTTCATTAATAA+AGG | + | chr8_4:54801877-54801896 | None:intergenic | 30.0% |
!!! | TGTACTTTCTAGTTTTCTCT+AGG | - | chr8_4:54802175-54802194 | Msa1334380:intron | 30.0% |
TACTAACATAATCAGAACGA+TGG | + | chr8_4:54802471-54802490 | None:intergenic | 30.0% | |
! | GGACATTAACTTTTTGTAAG+TGG | - | chr8_4:54802512-54802531 | Msa1334380:CDS | 30.0% |
TGTAACAAGATCATGAACAA+CGG | + | chr8_4:54802697-54802716 | None:intergenic | 30.0% | |
CTTGATGGAAAATCCTTATT+CGG | - | chr8_4:54802853-54802872 | Msa1334380:intron | 30.0% | |
ATTTCATCCAAATCCGAATA+AGG | + | chr8_4:54802869-54802888 | None:intergenic | 30.0% | |
GGATTTGGATGAAATAAAGA+AGG | - | chr8_4:54802874-54802893 | Msa1334380:intron | 30.0% | |
GAAATAAAGAAGGATTCTAG+TGG | - | chr8_4:54802884-54802903 | Msa1334380:intron | 30.0% | |
AACAGATATTGGTGAACAAT+TGG | - | chr8_4:54802938-54802957 | Msa1334380:intron | 30.0% | |
!!! | CCATATGTTTTGAAATTGGT+CGG | + | chr8_4:54802975-54802994 | None:intergenic | 30.0% |
CGACCAATTTCAAAACATAT+GGG | - | chr8_4:54802973-54802992 | Msa1334380:intron | 30.0% | |
GACCAATTTCAAAACATATG+GGG | - | chr8_4:54802974-54802993 | Msa1334380:intron | 30.0% | |
TTAATCAAGCAGAGAAAACT+TGG | - | chr8_4:54803002-54803021 | Msa1334380:intron | 30.0% | |
!!! | TAATCCTTAGTTTTGGTTCA+TGG | - | chr8_4:54803114-54803133 | Msa1334380:intron | 30.0% |
ACTAGTGAGGGTTAAAATAA+TGG | + | chr8_4:54803151-54803170 | None:intergenic | 30.0% | |
!! | ATTTTAACCCTCACTAGTTT+TGG | - | chr8_4:54803153-54803172 | Msa1334380:intron | 30.0% |
CTGAAAGACAAAATTCCAAT+AGG | + | chr8_4:54803258-54803277 | None:intergenic | 30.0% | |
! | GGAATTTTGTCTTTCAGATT+TGG | - | chr8_4:54803261-54803280 | Msa1334380:intron | 30.0% |
AATTGTGAATTCACACAATG+TGG | + | chr8_4:54803339-54803358 | None:intergenic | 30.0% | |
!!! | GATATTTTGGCTGATTCATT+AGG | - | chr8_4:54803823-54803842 | Msa1334380:intron | 30.0% |
! | TGATGTTGCACTAATTTTGT+CGG | - | chr8_4:54803888-54803907 | Msa1334380:intron | 30.0% |
!! | TGAGCTTTTTGATTCATGTA+TGG | - | chr8_4:54804053-54804072 | Msa1334380:CDS | 30.0% |
! | GAGAAGTACATGAAAGAATA+AGG | + | chr8_4:54804089-54804108 | None:intergenic | 30.0% |
ACTATTTGCAAGATATCTGA+TGG | + | chr8_4:54804316-54804335 | None:intergenic | 30.0% | |
CATTAGAAAATTTCTCAAGG+AGG | + | chr8_4:54804497-54804516 | None:intergenic | 30.0% | |
! | CTCCTTGAGAAATTTTCTAA+TGG | - | chr8_4:54804495-54804514 | Msa1334380:intron | 30.0% |
AAGACATGACAATAGAAATC+TGG | + | chr8_4:54804536-54804555 | None:intergenic | 30.0% | |
AGAGAATCTATAGCATCTTA+AGG | + | chr8_4:54804559-54804578 | None:intergenic | 30.0% | |
ATTAAGTGAAAGTTCTTCCA+AGG | + | chr8_4:54804883-54804902 | None:intergenic | 30.0% | |
!! | TATTACATTTGGTTTGTTCC+AGG | - | chr8_4:54805240-54805259 | Msa1334380:CDS | 30.0% |
! | TTGAGGTTCCTTAAACTTTT+TGG | - | chr8_4:54805385-54805404 | Msa1334380:CDS | 30.0% |
!! | GAAGAAATCAGTTGTTTTGT+TGG | - | chr8_4:54805502-54805521 | Msa1334380:CDS | 30.0% |
!! | AGAAATCAGTTGTTTTGTTG+GGG | - | chr8_4:54805504-54805523 | Msa1334380:CDS | 30.0% |
! | GTAACAAATGCTTTTCTCAA+AGG | - | chr8_4:54805556-54805575 | Msa1334380:CDS | 30.0% |
!!! | ATTGGGAATGAGGGTTTTTT+GGG | + | chr8_4:54788759-54788778 | None:intergenic | 35.0% |
! | AGAACAAGGTTGTTGTTGTT+GGG | + | chr8_4:54788792-54788811 | None:intergenic | 35.0% |
! | AAGAACAAGGTTGTTGTTGT+TGG | + | chr8_4:54788793-54788812 | None:intergenic | 35.0% |
ACAAAACAACTAAAGGGTCA+CGG | - | chr8_4:54788860-54788879 | Msa1334380:CDS | 35.0% | |
! | GGTTTTTCCGACAAAGAAAT+TGG | - | chr8_4:54788881-54788900 | Msa1334380:CDS | 35.0% |
!! | GGAACATTTGATGATGATGA+TGG | + | chr8_4:54788926-54788945 | None:intergenic | 35.0% |
ATGGGAGAATCAAGAGAAAA+TGG | + | chr8_4:54788947-54788966 | None:intergenic | 35.0% | |
TCAATTCCTCTCTTGAGAAA+GGG | + | chr8_4:54788977-54788996 | None:intergenic | 35.0% | |
TTCAATTCCTCTCTTGAGAA+AGG | + | chr8_4:54788978-54788997 | None:intergenic | 35.0% | |
GTATAAGATTCATGGGGTAA+TGG | + | chr8_4:54789034-54789053 | None:intergenic | 35.0% | |
! | GAAGAGGTATAAGATTCATG+GGG | + | chr8_4:54789040-54789059 | None:intergenic | 35.0% |
! | ACTGAAACTAATGATAGCGA+TGG | - | chr8_4:54789256-54789275 | Msa1334380:intron | 35.0% |
ATTTCTACGAATTGACACGT+TGG | + | chr8_4:54789302-54789321 | None:intergenic | 35.0% | |
ACGTGTCAATTCGTAGAAAT+CGG | - | chr8_4:54789302-54789321 | Msa1334380:intron | 35.0% | |
GAATGAAGATGATCATCATG+CGG | - | chr8_4:54789387-54789406 | Msa1334380:intron | 35.0% | |
TGCCAAAAGCAAGAAAAAAG+GGG | - | chr8_4:54789510-54789529 | Msa1334380:intron | 35.0% | |
!!! | AACCCCTTTTTTCTTGCTTT+TGG | + | chr8_4:54789515-54789534 | None:intergenic | 35.0% |
CAAGAAAAAAGGGGTTGTTA+AGG | - | chr8_4:54789519-54789538 | Msa1334380:intron | 35.0% | |
! | AAATCTTCTCCGTTCCTTTT+CGG | + | chr8_4:54789562-54789581 | None:intergenic | 35.0% |
AGAGACATTTCTTGCAAAGA+AGG | + | chr8_4:54789607-54789626 | None:intergenic | 35.0% | |
TCTTTAAGCCGAATATGAGT+AGG | + | chr8_4:54789769-54789788 | None:intergenic | 35.0% | |
CACTAAATGTTTCGGAATGT+TGG | - | chr8_4:54789816-54789835 | Msa1334380:intron | 35.0% | |
ATGGTCGGAACATTTATTTG+TGG | - | chr8_4:54790088-54790107 | Msa1334380:intron | 35.0% | |
AAGACTAGCATATGTGAGAA+GGG | + | chr8_4:54790312-54790331 | None:intergenic | 35.0% | |
TAAGACTAGCATATGTGAGA+AGG | + | chr8_4:54790313-54790332 | None:intergenic | 35.0% | |
!! | TTAGAAGTGTTATCACTAGC+TGG | - | chr8_4:54790440-54790459 | Msa1334380:CDS | 35.0% |
AAGAGTTACATCATTGCATG+TGG | - | chr8_4:54790491-54790510 | Msa1334380:CDS | 35.0% | |
TGCATGTGGTCAGAATATTA+AGG | - | chr8_4:54790505-54790524 | Msa1334380:CDS | 35.0% | |
GCCTTAAGAATGAAAGACTA+AGG | + | chr8_4:54790600-54790619 | None:intergenic | 35.0% | |
GTCAGGAATATTTCTTCATG+TGG | - | chr8_4:54791140-54791159 | Msa1334380:intron | 35.0% | |
!!! | TGAAGCAATTGCTGCTTTTT+TGG | - | chr8_4:54791377-54791396 | Msa1334380:intron | 35.0% |
GTTAAGTGAAAGTTCTTCCA+AGG | + | chr8_4:54791418-54791437 | None:intergenic | 35.0% | |
TGCTTATGAAAGGATTGATC+TGG | - | chr8_4:54791563-54791582 | Msa1334380:intron | 35.0% | |
GATCTGGTTGAAACTTAGAT+TGG | - | chr8_4:54791579-54791598 | Msa1334380:intron | 35.0% | |
!! | GTGATTTGTTCTACTGTTTG+TGG | - | chr8_4:54791719-54791738 | Msa1334380:intron | 35.0% |
! | ACATTTGGTTTAATCCAGGT+TGG | - | chr8_4:54791886-54791905 | Msa1334380:intron | 35.0% |
TGCATTGTTTGCAAGTGATA+AGG | + | chr8_4:54791923-54791942 | None:intergenic | 35.0% | |
! | TAAACTTTTCGGATGTTCAC+AGG | - | chr8_4:54792038-54792057 | Msa1334380:intron | 35.0% |
! | TTTTCAGTGTGTCTAGTAGA+AGG | - | chr8_4:54792373-54792392 | Msa1334380:intron | 35.0% |
TGCACTCTAAATTCTTAACC+TGG | - | chr8_4:54792548-54792567 | Msa1334380:intron | 35.0% | |
! | AAAGAAAGCATATCCTAACC+AGG | - | chr8_4:54792636-54792655 | Msa1334380:intron | 35.0% |
! | AGAGCATCAATTTCCATGTA+TGG | - | chr8_4:54792715-54792734 | Msa1334380:intron | 35.0% |
TATGGAGAAGTCAGAAATTC+CGG | + | chr8_4:54793033-54793052 | None:intergenic | 35.0% | |
ATGTTGGTATTGTTCTCTCA+AGG | + | chr8_4:54793151-54793170 | None:intergenic | 35.0% | |
TGCGTATTGGGTTAATCAAA+CGG | + | chr8_4:54793281-54793300 | None:intergenic | 35.0% | |
! | AGCTTCATTCTCTTGCATTT+TGG | - | chr8_4:54793404-54793423 | Msa1334380:intron | 35.0% |
! | GCTTCATTCTCTTGCATTTT+GGG | - | chr8_4:54793405-54793424 | Msa1334380:intron | 35.0% |
TCCATAACCTCTAGTTAAGT+TGG | - | chr8_4:54793508-54793527 | Msa1334380:intron | 35.0% | |
TCCAACTTAACTAGAGGTTA+TGG | + | chr8_4:54793512-54793531 | None:intergenic | 35.0% | |
ATCTCTTCCAACTTAACTAG+AGG | + | chr8_4:54793518-54793537 | None:intergenic | 35.0% | |
AGGTCCTAAAAACACAAAAG+AGG | + | chr8_4:54793647-54793666 | None:intergenic | 35.0% | |
!!! | GATCCTATTTTGAGTTCACA+AGG | + | chr8_4:54794185-54794204 | None:intergenic | 35.0% |
ACAAAAAATTCACCCTTAGG+TGG | - | chr8_4:54794334-54794353 | Msa1334380:CDS | 35.0% | |
AGAGAATTGTATCCACCTAA+GGG | + | chr8_4:54794349-54794368 | None:intergenic | 35.0% | |
!! | GTGTTATTTGTGTTTGTCCA+TGG | - | chr8_4:54794466-54794485 | Msa1334380:CDS | 35.0% |
TAAATGCATGTGATGCAAAG+TGG | + | chr8_4:54794537-54794556 | None:intergenic | 35.0% | |
AAGTAGGGACTAAACTTACA+AGG | + | chr8_4:54795260-54795279 | None:intergenic | 35.0% | |
AAGTAGGGACTAAACTTACA+AGG | - | chr8_4:54795260-54795279 | Msa1334380:intron | 35.0% | |
! | ATATGTTGATTGGATGGAAG+AGG | - | chr8_4:54795563-54795582 | Msa1334380:intron | 35.0% |
! | TATGTTGATTGGATGGAAGA+GGG | - | chr8_4:54795564-54795583 | Msa1334380:intron | 35.0% |
TGTGACCAAACCAAATTTCT+TGG | + | chr8_4:54795646-54795665 | None:intergenic | 35.0% | |
! | CAGGACCAAGAAATTTTCTT+TGG | + | chr8_4:54795763-54795782 | None:intergenic | 35.0% |
CAAAGAAAATTTCTTGGTCC+TGG | - | chr8_4:54795761-54795780 | Msa1334380:intron | 35.0% | |
TAATGAATGAGAAGACAAGC+AGG | + | chr8_4:54795821-54795840 | None:intergenic | 35.0% | |
GCTTGTCTTCTCATTCATTA+TGG | - | chr8_4:54795821-54795840 | Msa1334380:intron | 35.0% | |
TGTTTGGATGAGAAGAGAAA+GGG | - | chr8_4:54795940-54795959 | Msa1334380:intron | 35.0% | |
GAAAGTGAGTAGAATATGAG+TGG | - | chr8_4:54796001-54796020 | Msa1334380:intron | 35.0% | |
GAAAGTGAATAGATAGTGAG+AGG | - | chr8_4:54796060-54796079 | Msa1334380:intron | 35.0% | |
CGAAACTTTCTGCTCAAATT+TGG | - | chr8_4:54796378-54796397 | Msa1334380:intron | 35.0% | |
ACTTTCTGCTCAAATTTGGA+AGG | - | chr8_4:54796382-54796401 | Msa1334380:intron | 35.0% | |
CTTTCTGCTCAAATTTGGAA+GGG | - | chr8_4:54796383-54796402 | Msa1334380:intron | 35.0% | |
!! | TCTAAGGAAAGAAAGCATCA+AGG | + | chr8_4:54796506-54796525 | None:intergenic | 35.0% |
! | TTTGGAACAACTGATCTCTA+AGG | + | chr8_4:54796522-54796541 | None:intergenic | 35.0% |
CGCATGAAAACCTTCATTTA+GGG | + | chr8_4:54796549-54796568 | None:intergenic | 35.0% | |
TGTTATGTATGCTTTCCCAA+AGG | - | chr8_4:54796604-54796623 | Msa1334380:intron | 35.0% | |
GATATGTCACTCCTACAAAT+AGG | + | chr8_4:54796631-54796650 | None:intergenic | 35.0% | |
GACTAACAAAGTCTACATTC+AGG | + | chr8_4:54797167-54797186 | None:intergenic | 35.0% | |
TCAGGGACTAAATTGACTAA+CGG | + | chr8_4:54797181-54797200 | None:intergenic | 35.0% | |
ACTAACGAAGTCTACATTCA+GGG | + | chr8_4:54797230-54797249 | None:intergenic | 35.0% | |
CTAGAACTCCAAATTACCAA+GGG | + | chr8_4:54797416-54797435 | None:intergenic | 35.0% | |
ACTAGAACTCCAAATTACCA+AGG | + | chr8_4:54797417-54797436 | None:intergenic | 35.0% | |
TAGACTTAGGGTAAGAGAAA+GGG | + | chr8_4:54797840-54797859 | None:intergenic | 35.0% | |
CAAATCTTCACACTAGACTT+AGG | + | chr8_4:54797853-54797872 | None:intergenic | 35.0% | |
AATCCACCAAGTTATTTGTG+GGG | + | chr8_4:54797913-54797932 | None:intergenic | 35.0% | |
GTAATCCACCAAGTTATTTG+TGG | + | chr8_4:54797915-54797934 | None:intergenic | 35.0% | |
!! | AATAACTTGGTGGATTACGA+CGG | - | chr8_4:54797917-54797936 | Msa1334380:intron | 35.0% |
CCTTAATAAGGAACCAAAGA+AGG | + | chr8_4:54798090-54798109 | None:intergenic | 35.0% | |
! | CCTTCTTTGGTTCCTTATTA+AGG | - | chr8_4:54798087-54798106 | Msa1334380:intron | 35.0% |
GATAATCAGACACGAATCTA+AGG | + | chr8_4:54798269-54798288 | None:intergenic | 35.0% | |
! | CAAAAAAGCACAAATTACGG+CGG | - | chr8_4:54798439-54798458 | Msa1334380:intron | 35.0% |
! | AAAAAAGCACAAATTACGGC+GGG | - | chr8_4:54798440-54798459 | Msa1334380:intron | 35.0% |
!!! | CTTTTTTGTGAAGTGTAGGA+AGG | - | chr8_4:54798632-54798651 | Msa1334380:intron | 35.0% |
TTCCATCTCTTATCTTTGCT+TGG | - | chr8_4:54798689-54798708 | Msa1334380:intron | 35.0% | |
AACCAAGCAAAGATAAGAGA+TGG | + | chr8_4:54798694-54798713 | None:intergenic | 35.0% | |
! | ATTTCTGACTTGTAAGGATC+AGG | - | chr8_4:54798940-54798959 | Msa1334380:intron | 35.0% |
! | GTGATTAGTTAGTTGTGTGA+TGG | + | chr8_4:54799172-54799191 | None:intergenic | 35.0% |
TTTATCAACCAATTTAGCGC+GGG | - | chr8_4:54799472-54799491 | Msa1334380:intron | 35.0% | |
AAGTTATGTCATCAATGGGA+GGG | + | chr8_4:54799547-54799566 | None:intergenic | 35.0% | |
TTCTATCACAGAACAACTGA+AGG | - | chr8_4:54799565-54799584 | Msa1334380:intron | 35.0% | |
TCTATCACAGAACAACTGAA+GGG | - | chr8_4:54799566-54799585 | Msa1334380:intron | 35.0% | |
! | GGTTTTTCCGACAAAGAAAT+TGG | - | chr8_4:54788881-54788900 | Msa1334380:CDS | 35.0% |
GATTGCACCAATTTCTTTGT+CGG | + | chr8_4:54799603-54799622 | None:intergenic | 35.0% | |
TTCAGGAACAAATGTTGATG+GGG | + | chr8_4:54799636-54799655 | None:intergenic | 35.0% | |
GATTCAGGAACAAATGTTGA+TGG | + | chr8_4:54799638-54799657 | None:intergenic | 35.0% | |
TGAATATGATTGGGAGATTC+AGG | + | chr8_4:54799653-54799672 | None:intergenic | 35.0% | |
! | TGAGTGGTTTCTTTCCTTTT+GGG | + | chr8_4:54799787-54799806 | None:intergenic | 35.0% |
!!! | GCCAAAGGTATTTGATTTTC+TGG | + | chr8_4:54799863-54799882 | None:intergenic | 35.0% |
! | GCATTGATATCAAAAGCCAA+AGG | + | chr8_4:54799878-54799897 | None:intergenic | 35.0% |
!! | ATGATGATTTTGCGATTTGG+AGG | - | chr8_4:54799939-54799958 | Msa1334380:intron | 35.0% |
GTGGAACATGAAATTGATGA+TGG | - | chr8_4:54800070-54800089 | Msa1334380:intron | 35.0% | |
ATTGTTTCAGAGAAAGGAGT+TGG | + | chr8_4:54800100-54800119 | None:intergenic | 35.0% | |
GCTTTGATTGTTTCAGAGAA+AGG | + | chr8_4:54800106-54800125 | None:intergenic | 35.0% | |
! | TTGTTGATGAATCCCTTACT+TGG | - | chr8_4:54800164-54800183 | Msa1334380:intron | 35.0% |
! | TGTTGATGAATCCCTTACTT+GGG | - | chr8_4:54800165-54800184 | Msa1334380:intron | 35.0% |
!!! | CAGTTTTGAAACCCAAGTAA+GGG | + | chr8_4:54800179-54800198 | None:intergenic | 35.0% |
!!! | TCAGTTTTGAAACCCAAGTA+AGG | + | chr8_4:54800180-54800199 | None:intergenic | 35.0% |
ACTTGGGTTTCAAAACTGAA+TGG | - | chr8_4:54800181-54800200 | Msa1334380:intron | 35.0% | |
! | TGAATGGAGAAGATTTTGTG+AGG | - | chr8_4:54800197-54800216 | Msa1334380:intron | 35.0% |
GTTGGACAATTCCATATTAG+AGG | - | chr8_4:54800465-54800484 | Msa1334380:intron | 35.0% | |
GTGTGAAGTTACAAATCACA+GGG | - | chr8_4:54800601-54800620 | Msa1334380:intron | 35.0% | |
TACTACTATACTTGTGCCTA+AGG | - | chr8_4:54800829-54800848 | Msa1334380:intron | 35.0% | |
ACTACTATACTTGTGCCTAA+GGG | - | chr8_4:54800830-54800849 | Msa1334380:intron | 35.0% | |
TCAACCTTCAACCAAAACTA+AGG | - | chr8_4:54800933-54800952 | Msa1334380:intron | 35.0% | |
GTCAACTTGACAGATATTGA+TGG | + | chr8_4:54801125-54801144 | None:intergenic | 35.0% | |
AATTATGACCAATAGTAGCC+AGG | - | chr8_4:54801234-54801253 | Msa1334380:intron | 35.0% | |
ATTATGACCAATAGTAGCCA+GGG | - | chr8_4:54801235-54801254 | Msa1334380:intron | 35.0% | |
! | GATACGACATGTTCTTCTTT+TGG | - | chr8_4:54801260-54801279 | Msa1334380:intron | 35.0% |
AGATCACGAACAACATTAGT+TGG | - | chr8_4:54801290-54801309 | Msa1334380:intron | 35.0% | |
CACAAACGTAGGATTTAGTT+AGG | - | chr8_4:54801795-54801814 | Msa1334380:intron | 35.0% | |
! | GGAGTGAGTTTAAAATTCAC+AGG | + | chr8_4:54802095-54802114 | None:intergenic | 35.0% |
AAGTCACTGAGAGAAAACAA+AGG | + | chr8_4:54802268-54802287 | None:intergenic | 35.0% | |
TGGGATCAATTTGGTATATC+TGG | + | chr8_4:54802301-54802320 | None:intergenic | 35.0% | |
GAAGAAACTTGGGATCAATT+TGG | + | chr8_4:54802310-54802329 | None:intergenic | 35.0% | |
! | CAGTGTATGTTTTCTTCTGT+TGG | + | chr8_4:54802342-54802361 | None:intergenic | 35.0% |
TATTTGCTTGAAGGATCGTT+TGG | + | chr8_4:54802385-54802404 | None:intergenic | 35.0% | |
AGATGCAGTTATTTGCTTGA+AGG | + | chr8_4:54802394-54802413 | None:intergenic | 35.0% | |
! | TCTCATTCATTTTCCAATCC+TGG | - | chr8_4:54802411-54802430 | Msa1334380:CDS | 35.0% |
AAAATTAGACATGCCAGGAT+TGG | + | chr8_4:54802427-54802446 | None:intergenic | 35.0% | |
CAGGAAAAATGACTACTGTT+GGG | + | chr8_4:54802647-54802666 | None:intergenic | 35.0% | |
TCAGGAAAAATGACTACTGT+TGG | + | chr8_4:54802648-54802667 | None:intergenic | 35.0% | |
! | AACAACGACTATTGATAGCT+CGG | + | chr8_4:54802721-54802740 | None:intergenic | 35.0% |
!! | TCTTTTGGTGCAACATGATT+AGG | + | chr8_4:54802783-54802802 | None:intergenic | 35.0% |
! | GTTACAATAGGTTGCTCTTT+TGG | + | chr8_4:54802798-54802817 | None:intergenic | 35.0% |
!! | TGGTTACTACTGGTCATTTT+GGG | - | chr8_4:54802823-54802842 | Msa1334380:intron | 35.0% |
GGAAAATCCTTATTCGGATT+TGG | - | chr8_4:54802859-54802878 | Msa1334380:intron | 35.0% | |
AGGATTCTAGTGGAAAAAAC+AGG | - | chr8_4:54802894-54802913 | Msa1334380:intron | 35.0% | |
GGATTCTAGTGGAAAAAACA+GGG | - | chr8_4:54802895-54802914 | Msa1334380:intron | 35.0% | |
CAATATCTGTTTAGTTGACC+AGG | + | chr8_4:54802929-54802948 | None:intergenic | 35.0% | |
CTGGTCAACTAAACAGATAT+TGG | - | chr8_4:54802927-54802946 | Msa1334380:intron | 35.0% | |
CCGACCAATTTCAAAACATA+TGG | - | chr8_4:54802972-54802991 | Msa1334380:intron | 35.0% | |
!!! | TGCCCCATATGTTTTGAAAT+TGG | + | chr8_4:54802979-54802998 | None:intergenic | 35.0% |
TGGCAGCATCAAAAACTAAA+AGG | + | chr8_4:54803043-54803062 | None:intergenic | 35.0% | |
TCAACCATGAACCAAAACTA+AGG | + | chr8_4:54803121-54803140 | None:intergenic | 35.0% | |
CATTCAACCAAAACTAGTGA+GGG | + | chr8_4:54803163-54803182 | None:intergenic | 35.0% | |
!!! | ACTAGTTTTGGTTGAATGGT+TGG | - | chr8_4:54803165-54803184 | Msa1334380:intron | 35.0% |
GCTAGGTTATATATAGCACT+TGG | - | chr8_4:54803193-54803212 | Msa1334380:intron | 35.0% | |
! | TCTTTCAGATTTGGAATGTG+TGG | - | chr8_4:54803270-54803289 | Msa1334380:intron | 35.0% |
TTGTGTGAAGTCACAATTCT+GGG | - | chr8_4:54803309-54803328 | Msa1334380:intron | 35.0% | |
CCAACTGTTTGATCAAGATT+AGG | + | chr8_4:54803457-54803476 | None:intergenic | 35.0% | |
CCTAATCTTGATCAAACAGT+TGG | - | chr8_4:54803454-54803473 | Msa1334380:intron | 35.0% | |
ATCAATCTAGACAAGCAGTT+TGG | + | chr8_4:54803679-54803698 | None:intergenic | 35.0% | |
!! | TTGATTAGTCTATCTCTCAC+CGG | - | chr8_4:54803694-54803713 | Msa1334380:intron | 35.0% |
CATGTCGTCTTACTGATAAA+GGG | - | chr8_4:54803719-54803738 | Msa1334380:intron | 35.0% | |
!! | GGAACATTGGCTTAGATTTA+TGG | + | chr8_4:54803782-54803801 | None:intergenic | 35.0% |
AAAAAGTGAGAAGGGAACAT+TGG | + | chr8_4:54803795-54803814 | None:intergenic | 35.0% | |
AAGACTGGAAAAAGTGAGAA+GGG | + | chr8_4:54803803-54803822 | None:intergenic | 35.0% | |
ATCAGCCAAAATATCAAGAC+TGG | + | chr8_4:54803818-54803837 | None:intergenic | 35.0% | |
!! | TTAGAAGTATTGTCACTAGC+TGG | - | chr8_4:54803931-54803950 | Msa1334380:intron | 35.0% |
! | TAGAAATCTGGTTTGAGTCT+TGG | + | chr8_4:54804524-54804543 | None:intergenic | 35.0% |
TTCTCTAACTCGTCATAGAT+TGG | - | chr8_4:54804573-54804592 | Msa1334380:intron | 35.0% | |
TGATATGCTTCATGTGTCTA+TGG | - | chr8_4:54804720-54804739 | Msa1334380:CDS | 35.0% | |
CAATTGCTTCATCACTGTAA+CGG | + | chr8_4:54804833-54804852 | None:intergenic | 35.0% | |
! | TGAAGCAATTGCTGCATTTT+TGG | - | chr8_4:54804842-54804861 | Msa1334380:CDS | 35.0% |
!! | GCTGCATTTTTGGAGATAAA+TGG | - | chr8_4:54804852-54804871 | Msa1334380:CDS | 35.0% |
! | AAGCTTTGTGCTATTGTTTC+TGG | - | chr8_4:54805148-54805167 | Msa1334380:CDS | 35.0% |
! | CAAGTGATAAGCTTGTTTGT+TGG | + | chr8_4:54805270-54805289 | None:intergenic | 35.0% |
TGCATACCTTAGATCTATCA+TGG | - | chr8_4:54805308-54805327 | Msa1334380:CDS | 35.0% | |
AACTTGACAGACAATGAGTT+TGG | - | chr8_4:54805337-54805356 | Msa1334380:CDS | 35.0% | |
GTGAGCATCCAAAAAGTTTA+AGG | + | chr8_4:54805396-54805415 | None:intergenic | 35.0% | |
! | TAAACTTTTTGGATGCTCAC+AGG | - | chr8_4:54805396-54805415 | Msa1334380:CDS | 35.0% |
TGAATGTTAAGTACTTTGGC+AGG | - | chr8_4:54805534-54805553 | Msa1334380:CDS | 35.0% | |
AGAACACTTTGATGAGGATT+AGG | + | chr8_4:54805649-54805668 | None:intergenic | 35.0% | |
!!! | GATTGGGAATGAGGGTTTTT+TGG | + | chr8_4:54788760-54788779 | None:intergenic | 40.0% |
! | GGAATTTGGATTGGGAATGA+GGG | + | chr8_4:54788768-54788787 | None:intergenic | 40.0% |
! | TGGAATTTGGATTGGGAATG+AGG | + | chr8_4:54788769-54788788 | None:intergenic | 40.0% |
TGTTGGGTGGAATTTGGATT+GGG | + | chr8_4:54788776-54788795 | None:intergenic | 40.0% | |
TTGTTGGGTGGAATTTGGAT+TGG | + | chr8_4:54788777-54788796 | None:intergenic | 40.0% | |
! | TGTTGTTGTTGGGTGGAATT+TGG | + | chr8_4:54788782-54788801 | None:intergenic | 40.0% |
CAATTGGAAGAGGAAGAACA+AGG | + | chr8_4:54788806-54788825 | None:intergenic | 40.0% | |
AGGAACAGAACAATTGGAAG+AGG | + | chr8_4:54788816-54788835 | None:intergenic | 40.0% | |
ATAGAATCAACATCGCTGAG+TGG | + | chr8_4:54788839-54788858 | None:intergenic | 40.0% | |
TTGAGAAAGGGCTCATGAAT+GGG | + | chr8_4:54788965-54788984 | None:intergenic | 40.0% | |
!!! | GTTGTAGAGTTTTAAGCGCT+TGG | + | chr8_4:54789071-54789090 | None:intergenic | 40.0% |
! | ATGAGTGGTTTCTTGCCTTT+TGG | + | chr8_4:54789103-54789122 | None:intergenic | 40.0% |
! | ATCACTGTCACTGATAACGA+TGG | + | chr8_4:54789152-54789171 | None:intergenic | 40.0% |
! | GTGATGATGAAGATGATCAG+AGG | - | chr8_4:54789167-54789186 | Msa1334380:CDS | 40.0% |
TGATGAAGATGATCAGAGGA+AGG | - | chr8_4:54789171-54789190 | Msa1334380:CDS | 40.0% | |
CAATTCGTAGAAATCGGTAC+AGG | - | chr8_4:54789308-54789327 | Msa1334380:intron | 40.0% | |
!! | CATGAAGTTGATGCTGATGA+TGG | - | chr8_4:54789439-54789458 | Msa1334380:intron | 40.0% |
! | ATTGCTTCAGAGAAAGGTGT+TGG | + | chr8_4:54789469-54789488 | None:intergenic | 40.0% |
GCTTTGATTGCTTCAGAGAA+AGG | + | chr8_4:54789475-54789494 | None:intergenic | 40.0% | |
! | CCTTTTCGGAACCCAAATAA+AGG | + | chr8_4:54789548-54789567 | None:intergenic | 40.0% |
! | CCTTTATTTGGGTTCCGAAA+AGG | - | chr8_4:54789545-54789564 | Msa1334380:intron | 40.0% |
! | ATTTGGGTTCCGAAAAGGAA+CGG | - | chr8_4:54789550-54789569 | Msa1334380:intron | 40.0% |
GAAAAGGAACGGAGAAGATT+TGG | - | chr8_4:54789561-54789580 | Msa1334380:CDS | 40.0% | |
!! | AACGGAGAAGATTTGGTGAA+GGG | - | chr8_4:54789568-54789587 | Msa1334380:CDS | 40.0% |
! | ATTTGGTGAAGGGAAGGTTT+AGG | - | chr8_4:54789578-54789597 | Msa1334380:CDS | 40.0% |
TTTGGTGAAGGGAAGGTTTA+GGG | - | chr8_4:54789579-54789598 | Msa1334380:CDS | 40.0% | |
ATTCTTGCTAACCATGCTGA+TGG | - | chr8_4:54789631-54789650 | Msa1334380:intron | 40.0% | |
GATGGAATGGTTTCACTTGA+TGG | - | chr8_4:54789649-54789668 | Msa1334380:intron | 40.0% | |
!! | GGTTTCACTTGATGGTGTTT+CGG | - | chr8_4:54789657-54789676 | Msa1334380:intron | 40.0% |
TTTCGGATGAGCTCAAACAA+AGG | - | chr8_4:54789674-54789693 | Msa1334380:intron | 40.0% | |
GTGGGTTTCCTACTCATATT+CGG | - | chr8_4:54789758-54789777 | Msa1334380:intron | 40.0% | |
ATCAATCTAGACAAGCAGCT+TGG | + | chr8_4:54790188-54790207 | None:intergenic | 40.0% | |
!! | TTGATTAGTCTATCCCTCAC+TGG | - | chr8_4:54790203-54790222 | Msa1334380:CDS | 40.0% |
TGATGCTGCACTAATCTTGT+CGG | - | chr8_4:54790397-54790416 | Msa1334380:intron | 40.0% | |
CTCGATCTGCAGAAATTTGA+CGG | - | chr8_4:54790791-54790810 | Msa1334380:CDS | 40.0% | |
AAAACAAGAGACCACCTGAA+TGG | + | chr8_4:54790960-54790979 | None:intergenic | 40.0% | |
GGACAGATCATGATTACATG+CGG | + | chr8_4:54791311-54791330 | None:intergenic | 40.0% | |
AAGTTCTTCCAAGGATTTGC+CGG | + | chr8_4:54791409-54791428 | None:intergenic | 40.0% | |
CTTGCCAAATGTCTCTCAAT+TGG | - | chr8_4:54791469-54791488 | Msa1334380:intron | 40.0% | |
AGGTTAATGTTTCCGCTATC+TGG | - | chr8_4:54791789-54791808 | Msa1334380:intron | 40.0% | |
GCTAACTGAAAACCAGATAG+CGG | + | chr8_4:54791804-54791823 | None:intergenic | 40.0% | |
CAAGTGATAAGGTTGTCTGT+TGG | + | chr8_4:54791912-54791931 | None:intergenic | 40.0% | |
TGCATACCTTAGATCTGTCA+TGG | - | chr8_4:54791950-54791969 | Msa1334380:intron | 40.0% | |
AAAGAGCCTAATCCTAACCA+AGG | - | chr8_4:54792255-54792274 | Msa1334380:intron | 40.0% | |
!! | CGGACGACTTTTTCTTAACA+CGG | - | chr8_4:54792398-54792417 | Msa1334380:intron | 40.0% |
!! | ACGACTTTTTCTTAACACGG+TGG | - | chr8_4:54792401-54792420 | Msa1334380:intron | 40.0% |
ACTAGTAGAGATACCTGGTT+AGG | + | chr8_4:54792652-54792671 | None:intergenic | 40.0% | |
GACTTACTAGTAGAGATACC+TGG | + | chr8_4:54792657-54792676 | None:intergenic | 40.0% | |
AGTTGAGATCACCAAGCATA+TGG | + | chr8_4:54792763-54792782 | None:intergenic | 40.0% | |
CATGAAAGAGCAGATGATGT+TGG | + | chr8_4:54793167-54793186 | None:intergenic | 40.0% | |
CAACATCATCTGCTCTTTCA+TGG | - | chr8_4:54793165-54793184 | Msa1334380:intron | 40.0% | |
!! | AGAGGTACTCCTGAAGATAT+AGG | - | chr8_4:54793212-54793231 | Msa1334380:intron | 40.0% |
TAGCACAAGTAGTAGATACG+TGG | + | chr8_4:54794046-54794065 | None:intergenic | 40.0% | |
ACAAGGAATGGAAATAACGG+AGG | + | chr8_4:54794168-54794187 | None:intergenic | 40.0% | |
! | TGCCCGTTTTACGTTTATGT+TGG | + | chr8_4:54794207-54794226 | None:intergenic | 40.0% |
GAGAGAATTGTATCCACCTA+AGG | + | chr8_4:54794350-54794369 | None:intergenic | 40.0% | |
! | GGTTTACTCTAGAGAGAAGT+GGG | + | chr8_4:54794407-54794426 | None:intergenic | 40.0% |
! | AGGTTTACTCTAGAGAGAAG+TGG | + | chr8_4:54794408-54794427 | None:intergenic | 40.0% |
ATCATAACCTTGCTCAAGAC+AGG | + | chr8_4:54794428-54794447 | None:intergenic | 40.0% | |
ACACAAGAGTTTCTCGTAGA+GGG | + | chr8_4:54795614-54795633 | None:intergenic | 40.0% | |
TGAACCAGGACCAAGAAATT+TGG | - | chr8_4:54795633-54795652 | Msa1334380:intron | 40.0% | |
CAAACCAAATTTCTTGGTCC+TGG | + | chr8_4:54795640-54795659 | None:intergenic | 40.0% | |
CAGGACCAAGAAATTTGGTT+TGG | - | chr8_4:54795638-54795657 | Msa1334380:intron | 40.0% | |
TCTTCTCTCTCTTCTCTCTT+TGG | - | chr8_4:54795731-54795750 | Msa1334380:intron | 40.0% | |
AAGCAGGAACATATGTAGAG+GGG | + | chr8_4:54795805-54795824 | None:intergenic | 40.0% | |
CAAGCAGGAACATATGTAGA+GGG | + | chr8_4:54795806-54795825 | None:intergenic | 40.0% | |
ACAAGCAGGAACATATGTAG+AGG | + | chr8_4:54795807-54795826 | None:intergenic | 40.0% | |
GAAAGAAAGACTATAGCTGG+AGG | + | chr8_4:54795881-54795900 | None:intergenic | 40.0% | |
CTGTTTGGATGAGAAGAGAA+AGG | - | chr8_4:54795939-54795958 | Msa1334380:intron | 40.0% | |
! | AGAAAGTTTCGGAGAGTATG+GGG | + | chr8_4:54796369-54796388 | None:intergenic | 40.0% |
! | CAGAAAGTTTCGGAGAGTAT+GGG | + | chr8_4:54796370-54796389 | None:intergenic | 40.0% |
TGCTCAAATTTGGAAGGGAT+GGG | - | chr8_4:54796388-54796407 | Msa1334380:intron | 40.0% | |
AAGGGATGGGAATATTGTGT+GGG | - | chr8_4:54796401-54796420 | Msa1334380:intron | 40.0% | |
TCAAGAAACTTTCCATCGGT+TGG | + | chr8_4:54796468-54796487 | None:intergenic | 40.0% | |
!! | AGGAAAGAAAGCATCAAGGA+TGG | + | chr8_4:54796502-54796521 | None:intergenic | 40.0% |
TCCAAACAGACCCTAAATGA+AGG | - | chr8_4:54796536-54796555 | Msa1334380:intron | 40.0% | |
! | ACCTTCATTTAGGGTCTGTT+TGG | + | chr8_4:54796540-54796559 | None:intergenic | 40.0% |
GCGCATGAAAACCTTCATTT+AGG | + | chr8_4:54796550-54796569 | None:intergenic | 40.0% | |
TTCCCAAAGGTCCTATTTGT+AGG | - | chr8_4:54796617-54796636 | Msa1334380:intron | 40.0% | |
CTCCTACAAATAGGACCTTT+GGG | + | chr8_4:54796622-54796641 | None:intergenic | 40.0% | |
ACTCCTACAAATAGGACCTT+TGG | + | chr8_4:54796623-54796642 | None:intergenic | 40.0% | |
TGTTAGATGCTGATGCAAAG+TGG | + | chr8_4:54796715-54796734 | None:intergenic | 40.0% | |
TATGTCCACGTGTCAATGAT+TGG | - | chr8_4:54796799-54796818 | Msa1334380:intron | 40.0% | |
AATGATTGGACCCCACAAAT+TGG | - | chr8_4:54796813-54796832 | Msa1334380:intron | 40.0% | |
! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr8_4:54797090-54797109 | Msa1334380:intron | 40.0% |
! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr8_4:54797091-54797110 | Msa1334380:intron | 40.0% |
GACTAACGAAGTCTACATTC+AGG | + | chr8_4:54797231-54797250 | None:intergenic | 40.0% | |
!! | TCTCTGAAATTGACCATGCA+GGG | - | chr8_4:54797258-54797277 | Msa1334380:intron | 40.0% |
! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr8_4:54797091-54797110 | None:intergenic | 40.0% |
! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr8_4:54797090-54797109 | None:intergenic | 40.0% |
TCTCTGATTTCCTGAAGAAG+AGG | - | chr8_4:54797390-54797409 | Msa1334380:intron | 40.0% | |
TGGTTAGTGAGTTTCACCTA+AGG | + | chr8_4:54797511-54797530 | None:intergenic | 40.0% | |
ACGTCATCAGTCAAAGTAAG+TGG | - | chr8_4:54797774-54797793 | Msa1334380:intron | 40.0% | |
AGACTTAGGGTAAGAGAAAG+GGG | + | chr8_4:54797839-54797858 | None:intergenic | 40.0% | |
CTAGACTTAGGGTAAGAGAA+AGG | + | chr8_4:54797841-54797860 | None:intergenic | 40.0% | |
ATGATCCCCCACAAATAACT+TGG | - | chr8_4:54797904-54797923 | Msa1334380:intron | 40.0% | |
ATCCACCAAGTTATTTGTGG+GGG | + | chr8_4:54797912-54797931 | None:intergenic | 40.0% | |
!!! | CGCGCTAGTTTTTTCCATTT+GGG | - | chr8_4:54798153-54798172 | Msa1334380:intron | 40.0% |
!!! | GCGCTAGTTTTTTCCATTTG+GGG | - | chr8_4:54798154-54798173 | Msa1334380:intron | 40.0% |
! | AAAAAGCACAAATTACGGCG+GGG | - | chr8_4:54798441-54798460 | Msa1334380:intron | 40.0% |
GAAGTTATGTCATCAATGGG+AGG | + | chr8_4:54799548-54799567 | None:intergenic | 40.0% | |
TTTCTTTGTCGGAAAAACCG+TGG | + | chr8_4:54788880-54788899 | None:intergenic | 40.0% | |
! | AACAAATGTTGATGGGGCTA+AGG | + | chr8_4:54799630-54799649 | None:intergenic | 40.0% |
TCAGTTCCTCTCTTGAGAAA+GGG | + | chr8_4:54799698-54799717 | None:intergenic | 40.0% | |
TTCAGTTCCTCTCTTGAGAA+AGG | + | chr8_4:54799699-54799718 | None:intergenic | 40.0% | |
GAAAACACTTCTGACCCAAA+AGG | - | chr8_4:54799770-54799789 | Msa1334380:intron | 40.0% | |
! | GTGAGTGGTTTCTTTCCTTT+TGG | + | chr8_4:54799788-54799807 | None:intergenic | 40.0% |
! | CAATGACATTGATGATCGGA+AGG | - | chr8_4:54799832-54799851 | Msa1334380:intron | 40.0% |
ATTCTTGCCAATCATGCTGA+TGG | - | chr8_4:54800262-54800281 | Msa1334380:intron | 40.0% | |
TCTTTAAGCCGAATACGAGT+AGG | + | chr8_4:54800400-54800419 | None:intergenic | 40.0% | |
TTCGGCTTAAAGATTGCTCT+TGG | - | chr8_4:54800407-54800426 | Msa1334380:intron | 40.0% | |
CGTGTGAAGTTACAAATCAC+AGG | - | chr8_4:54800600-54800619 | Msa1334380:intron | 40.0% | |
TGAACTGTGAAGTCACCATT+CGG | - | chr8_4:54800629-54800648 | Msa1334380:intron | 40.0% | |
TCCAATCTTTGATCACACAG+TGG | - | chr8_4:54800723-54800742 | Msa1334380:intron | 40.0% | |
ACCACTGTGTGATCAAAGAT+TGG | + | chr8_4:54800727-54800746 | None:intergenic | 40.0% | |
TAGTAATAACTCGTCCACAC+TGG | + | chr8_4:54800910-54800929 | None:intergenic | 40.0% | |
! | TAAGAATGCCTCGTCTGTTT+TGG | - | chr8_4:54801069-54801088 | Msa1334380:intron | 40.0% |
!! | CAATATCTGTCAAGTTGACC+AGG | - | chr8_4:54801126-54801145 | Msa1334380:intron | 40.0% |
TGCATGAGGATCAAGAACAA+TGG | - | chr8_4:54801358-54801377 | Msa1334380:intron | 40.0% | |
AACAATGGCTACAACTAGCT+CGG | - | chr8_4:54801373-54801392 | Msa1334380:intron | 40.0% | |
! | TCAGGAACAACAACTCCTTT+TGG | - | chr8_4:54801407-54801426 | Msa1334380:intron | 40.0% |
TTAGGAACAACAACTACCAC+TGG | - | chr8_4:54801496-54801515 | Msa1334380:intron | 40.0% | |
!! | CTTCTGGAATTTCAGAGACA+AGG | - | chr8_4:54801666-54801685 | Msa1334380:intron | 40.0% |
GAAGCAATCACATTGCTGAA+AGG | - | chr8_4:54801710-54801729 | Msa1334380:intron | 40.0% | |
! | CAAGTCATGCTCTCTTTTGT+TGG | - | chr8_4:54801762-54801781 | Msa1334380:intron | 40.0% |
! | ATCTTTGTTACTTCTGTCGG+AGG | + | chr8_4:54801828-54801847 | None:intergenic | 40.0% |
AACACTTGGGAAGTTTCCAT+AGG | + | chr8_4:54801906-54801925 | None:intergenic | 40.0% | |
! | GTTTTCTCTGGGTAACACTT+GGG | + | chr8_4:54801919-54801938 | None:intergenic | 40.0% |
AGACAATGTCATCGATGACT+CGG | + | chr8_4:54801991-54802010 | None:intergenic | 40.0% | |
TCAAAAGTTGAGATCGGACA+TGG | - | chr8_4:54802050-54802069 | Msa1334380:intron | 40.0% | |
CTCATTAAACATGGAACGAC+TGG | + | chr8_4:54802147-54802166 | None:intergenic | 40.0% | |
TTTCTCTCAGTGACTTCTGT+CGG | - | chr8_4:54802272-54802291 | Msa1334380:CDS | 40.0% | |
!! | GTCAAGTGCTGAAGAAACTT+GGG | + | chr8_4:54802320-54802339 | None:intergenic | 40.0% |
GAAGGATCGTTTGGAAATGA+TGG | + | chr8_4:54802376-54802395 | None:intergenic | 40.0% | |
TGCTCAGTTGCAATTAGATC+TGG | + | chr8_4:54802549-54802568 | None:intergenic | 40.0% | |
TCTAATTGCAACTGAGCAAG+TGG | - | chr8_4:54802551-54802570 | Msa1334380:intron | 40.0% | |
ATAGTTAGCTCAGTTGCAGT+AGG | + | chr8_4:54802750-54802769 | None:intergenic | 40.0% | |
GTAACCAGAGCTGTTACAAT+AGG | + | chr8_4:54802810-54802829 | None:intergenic | 40.0% | |
! | CTGGTTACTACTGGTCATTT+TGG | - | chr8_4:54802822-54802841 | Msa1334380:intron | 40.0% |
TCTAGTGGAAAAAACAGGGA+AGG | - | chr8_4:54802899-54802918 | Msa1334380:intron | 40.0% | |
AAAAACAGGGAAGGTAATCC+TGG | - | chr8_4:54802908-54802927 | Msa1334380:intron | 40.0% | |
CCATTCAACCAAAACTAGTG+AGG | + | chr8_4:54803164-54803183 | None:intergenic | 40.0% | |
!!! | CCTCACTAGTTTTGGTTGAA+TGG | - | chr8_4:54803161-54803180 | Msa1334380:intron | 40.0% |
TGTGTGGAGTTACAATCACA+AGG | - | chr8_4:54803286-54803305 | Msa1334380:intron | 40.0% | |
GTTGTGTGAAGTCACAATTC+TGG | - | chr8_4:54803308-54803327 | Msa1334380:intron | 40.0% | |
GCATGTCGTCTTACTGATAA+AGG | - | chr8_4:54803718-54803737 | Msa1334380:intron | 40.0% | |
CAAGACTGGAAAAAGTGAGA+AGG | + | chr8_4:54803804-54803823 | None:intergenic | 40.0% | |
TGGTTTATATCTCGATGTGC+AGG | - | chr8_4:54804196-54804215 | Msa1334380:CDS | 40.0% | |
ATATCAAGTGCATGCAACTG+AGG | + | chr8_4:54804264-54804283 | None:intergenic | 40.0% | |
ATGCTTCATGTGTCTATGGA+TGG | - | chr8_4:54804724-54804743 | Msa1334380:CDS | 40.0% | |
GGAGATAAATGGCAAATCCT+TGG | - | chr8_4:54804863-54804882 | Msa1334380:CDS | 40.0% | |
GTGTTCAGCTATAACAAGAG+AGG | + | chr8_4:54804948-54804967 | None:intergenic | 40.0% | |
!! | ACATTTGGTTTGTTCCAGGT+TGG | - | chr8_4:54805244-54805263 | Msa1334380:CDS | 40.0% |
TCGACACCATGATAGATCTA+AGG | + | chr8_4:54805317-54805336 | None:intergenic | 40.0% | |
AACTCAGAGCTTCAGATCAT+TGG | - | chr8_4:54805586-54805605 | Msa1334380:CDS | 40.0% | |
ACTCAGAGCTTCAGATCATT+GGG | - | chr8_4:54805587-54805606 | Msa1334380:CDS | 40.0% | |
TATCGCAGAACACTTTGATG+AGG | + | chr8_4:54805655-54805674 | None:intergenic | 40.0% | |
! | ACAAGGTTGTTGTTGTTGGG+TGG | + | chr8_4:54788789-54788808 | None:intergenic | 45.0% |
GAGTGGAGGAACAGAACAAT+TGG | + | chr8_4:54788822-54788841 | None:intergenic | 45.0% | |
CTTGAGAAAGGGCTCATGAA+TGG | + | chr8_4:54788966-54788985 | None:intergenic | 45.0% | |
!!! | GAGTTTTAAGCGCTTGGAAG+AGG | + | chr8_4:54789065-54789084 | None:intergenic | 45.0% |
TGAAGATGATCATCATGCGG+CGG | - | chr8_4:54789390-54789409 | Msa1334380:intron | 45.0% | |
!! | GAACGGAGAAGATTTGGTGA+AGG | - | chr8_4:54789567-54789586 | Msa1334380:CDS | 45.0% |
!! | GAGAAGATTTGGTGAAGGGA+AGG | - | chr8_4:54789572-54789591 | Msa1334380:CDS | 45.0% |
TGCTAACCATGCTGATGGAA+TGG | - | chr8_4:54789636-54789655 | Msa1334380:intron | 45.0% | |
GTGAAACCATTCCATCAGCA+TGG | + | chr8_4:54789645-54789664 | None:intergenic | 45.0% | |
CAAACAAAGGCTTAGCGCAT+TGG | - | chr8_4:54789687-54789706 | Msa1334380:intron | 45.0% | |
TTCGGCTTAAAGATTGCTCC+TGG | - | chr8_4:54789776-54789795 | Msa1334380:intron | 45.0% | |
GAATTCTTCCTCTGTCAACC+AGG | + | chr8_4:54789797-54789816 | None:intergenic | 45.0% | |
GTTGGACACTTCCATACTAG+AGG | - | chr8_4:54789834-54789853 | Msa1334380:intron | 45.0% | |
CTGTTATAACTCGTCCACAC+TGG | + | chr8_4:54790133-54790152 | None:intergenic | 45.0% | |
TGCTTGCCGTCTTACTGATA+AGG | - | chr8_4:54790226-54790245 | Msa1334380:CDS | 45.0% | |
GCTTGCCGTCTTACTGATAA+GGG | - | chr8_4:54790227-54790246 | Msa1334380:CDS | 45.0% | |
CTTGCCGTCTTACTGATAAG+GGG | - | chr8_4:54790228-54790247 | Msa1334380:CDS | 45.0% | |
GCAACCCCTTATCAGTAAGA+CGG | + | chr8_4:54790235-54790254 | None:intergenic | 45.0% | |
GACACAATGCAGACGATACT+TGG | + | chr8_4:54791264-54791283 | None:intergenic | 45.0% | |
!!! | GCTGCTTTTTTGGAGATGAC+CGG | - | chr8_4:54791387-54791406 | Msa1334380:intron | 45.0% |
CGAGCCAATTGAGAGACATT+TGG | + | chr8_4:54791476-54791495 | None:intergenic | 45.0% | |
GGCTTCTCTGTGCTTATGAA+AGG | - | chr8_4:54791553-54791572 | Msa1334380:intron | 45.0% | |
TCGACACCATGACAGATCTA+AGG | + | chr8_4:54791959-54791978 | None:intergenic | 45.0% | |
TGGATAGCTGTTTGTCGCTA+AGG | - | chr8_4:54792010-54792029 | Msa1334380:intron | 45.0% | |
AGTGTGTCTAGTAGAAGGCA+CGG | - | chr8_4:54792378-54792397 | Msa1334380:intron | 45.0% | |
GGTTGATCGGTAGTTGTAAG+TGG | - | chr8_4:54792435-54792454 | Msa1334380:intron | 45.0% | |
GGTGATCTCAACTCTCTTCT+TGG | - | chr8_4:54792770-54792789 | Msa1334380:intron | 45.0% | |
GGATAAACCAGTGCTTCAGT+TGG | - | chr8_4:54793076-54793095 | Msa1334380:intron | 45.0% | |
CTAATTGCCAACTGAAGCAC+TGG | + | chr8_4:54793086-54793105 | None:intergenic | 45.0% | |
AGTGGGAGACCTATATCTTC+AGG | + | chr8_4:54793224-54793243 | None:intergenic | 45.0% | |
GAGTAAACCTGTCTTGAGCA+AGG | - | chr8_4:54794418-54794437 | Msa1334380:CDS | 45.0% | |
TTGATTGGATGGAAGAGGGA+GGG | - | chr8_4:54795568-54795587 | Msa1334380:intron | 45.0% | |
ACAAGAGTTTCTCGTAGAGG+GGG | + | chr8_4:54795612-54795631 | None:intergenic | 45.0% | |
CACAAGAGTTTCTCGTAGAG+GGG | + | chr8_4:54795613-54795632 | None:intergenic | 45.0% | |
CACACAAGAGTTTCTCGTAG+AGG | + | chr8_4:54795615-54795634 | None:intergenic | 45.0% | |
GAGAAACTCTTGTGTGAACC+AGG | - | chr8_4:54795619-54795638 | Msa1334380:intron | 45.0% | |
GAGAAATTCTTAGGTGGTCC+AGG | + | chr8_4:54795782-54795801 | None:intergenic | 45.0% | |
GTAGAGGGGGAGAAATTCTT+AGG | + | chr8_4:54795791-54795810 | None:intergenic | 45.0% | |
AGCAGGAACATATGTAGAGG+GGG | + | chr8_4:54795804-54795823 | None:intergenic | 45.0% | |
TCTCATTCATTATGGCCACG+TGG | - | chr8_4:54795829-54795848 | Msa1334380:intron | 45.0% | |
TCATTATGGCCACGTGGAAA+TGG | - | chr8_4:54795835-54795854 | Msa1334380:intron | 45.0% | |
AGAAAGACTATAGCTGGAGG+AGG | + | chr8_4:54795878-54795897 | None:intergenic | 45.0% | |
TAGTAAGGTCCTCTTGTGCA+AGG | - | chr8_4:54795903-54795922 | Msa1334380:intron | 45.0% | |
AGTAAGGTCCTCTTGTGCAA+GGG | - | chr8_4:54795904-54795923 | Msa1334380:intron | 45.0% | |
TAGAGATACCCTTGCACAAG+AGG | + | chr8_4:54795915-54795934 | None:intergenic | 45.0% | |
!! | TCTTGTGCAAGGGTATCTCT+AGG | - | chr8_4:54795914-54795933 | Msa1334380:intron | 45.0% |
!! | CTTGTGCAAGGGTATCTCTA+GGG | - | chr8_4:54795915-54795934 | Msa1334380:intron | 45.0% |
GCAGAAAGTTTCGGAGAGTA+TGG | + | chr8_4:54796371-54796390 | None:intergenic | 45.0% | |
CTGCTCAAATTTGGAAGGGA+TGG | - | chr8_4:54796387-54796406 | Msa1334380:intron | 45.0% | |
GAAGGGATGGGAATATTGTG+TGG | - | chr8_4:54796400-54796419 | Msa1334380:intron | 45.0% | |
TGGTTGCACAATAGAGAGGA+AGG | + | chr8_4:54796448-54796467 | None:intergenic | 45.0% | |
TCTATTGTGCAACCAACCGA+TGG | - | chr8_4:54796453-54796472 | Msa1334380:intron | 45.0% | |
TGCATGCTTGATGTGTTGCA+TGG | + | chr8_4:54796687-54796706 | None:intergenic | 45.0% | |
! | GTCACTTTAGTCCCTGAATG+GGG | - | chr8_4:54797092-54797111 | Msa1334380:intron | 45.0% |
ACTAACGGAGTCTGCATTCA+GGG | + | chr8_4:54797198-54797217 | None:intergenic | 45.0% | |
!! | GTCTCTGAAATTGACCATGC+AGG | - | chr8_4:54797257-54797276 | Msa1334380:intron | 45.0% |
TATGCAAAACAGTCCCTGCA+TGG | + | chr8_4:54797274-54797293 | None:intergenic | 45.0% | |
! | GTCACTTTAGTCCCTGAATG+GGG | + | chr8_4:54797092-54797111 | None:intergenic | 45.0% |
! | AGAAGAGGCCCTTGGTAATT+TGG | - | chr8_4:54797405-54797424 | Msa1334380:intron | 45.0% |
GACTTAGGGTAAGAGAAAGG+GGG | + | chr8_4:54797838-54797857 | None:intergenic | 45.0% | |
ATCCCCCACAAATAACTTGG+TGG | - | chr8_4:54797907-54797926 | Msa1334380:intron | 45.0% | |
GTGAGTGATCTCACCTTCTT+TGG | - | chr8_4:54798074-54798093 | Msa1334380:intron | 45.0% | |
!!! | GCGCGCTAGTTTTTTCCATT+TGG | - | chr8_4:54798152-54798171 | Msa1334380:intron | 45.0% |
CGCAGCAGATACTCAAGTTA+GGG | + | chr8_4:54798389-54798408 | None:intergenic | 45.0% | |
TCGCAGCAGATACTCAAGTT+AGG | + | chr8_4:54798390-54798409 | None:intergenic | 45.0% | |
!! | CTTGTTTTCCCGCGCTAAAT+TGG | + | chr8_4:54799483-54799502 | None:intergenic | 45.0% |
! | ATGTTGATGGGGCTAAGGTA+AGG | + | chr8_4:54799625-54799644 | None:intergenic | 45.0% |
CTCTTGAGAAAGGGTTCATG+TGG | + | chr8_4:54799689-54799708 | None:intergenic | 45.0% | |
CATGAACCCTTTCTCAAGAG+AGG | - | chr8_4:54799689-54799708 | Msa1334380:intron | 45.0% | |
GAGCTGTAATCATGAGTGAG+TGG | + | chr8_4:54799803-54799822 | None:intergenic | 45.0% | |
AGAGACATTTCTTGCAGCGA+AGG | + | chr8_4:54800238-54800257 | None:intergenic | 45.0% | |
AGCAAGTCCATCAGCATGAT+TGG | + | chr8_4:54800272-54800291 | None:intergenic | 45.0% | |
!! | TGCTTCGCTTGATGGTGTTT+CGG | - | chr8_4:54800288-54800307 | Msa1334380:intron | 45.0% |
TTTCGGACGAGCTCAAACAA+AGG | - | chr8_4:54800305-54800324 | Msa1334380:intron | 45.0% | |
GTGGGTTTCCTACTCGTATT+CGG | - | chr8_4:54800389-54800408 | Msa1334380:intron | 45.0% | |
AGATTGCTCTTGGATGACAG+AGG | - | chr8_4:54800417-54800436 | Msa1334380:intron | 45.0% | |
!!! | TGCCTCGTCTGTTTTGGAAT+TGG | - | chr8_4:54801075-54801094 | Msa1334380:intron | 45.0% |
GTCCAATTCCAAAACAGACG+AGG | + | chr8_4:54801080-54801099 | None:intergenic | 45.0% | |
GTATCAACCCTGGCTACTAT+TGG | + | chr8_4:54801245-54801264 | None:intergenic | 45.0% | |
AGAACATGTCGTATCAACCC+TGG | + | chr8_4:54801255-54801274 | None:intergenic | 45.0% | |
! | TTAGTTGGCTCAGTTGCAAC+AGG | - | chr8_4:54801305-54801324 | Msa1334380:intron | 45.0% |
AACAACGACTACTGCTGACA+CGG | - | chr8_4:54801334-54801353 | Msa1334380:intron | 45.0% | |
!!! | AACAACTCCTTTTGGCTCAG+TGG | - | chr8_4:54801415-54801434 | Msa1334380:intron | 45.0% |
CCTATTTCCACTGAGCCAAA+AGG | + | chr8_4:54801425-54801444 | None:intergenic | 45.0% | |
!!! | CCTTTTGGCTCAGTGGAAAT+AGG | - | chr8_4:54801422-54801441 | Msa1334380:intron | 45.0% |
GGCTCAGTTGCAACATGATT+AGG | - | chr8_4:54801471-54801490 | Msa1334380:intron | 45.0% | |
TGGACATGAACTCTATGCCA+GGG | + | chr8_4:54801555-54801574 | None:intergenic | 45.0% | |
TTGGACATGAACTCTATGCC+AGG | + | chr8_4:54801556-54801575 | None:intergenic | 45.0% | |
GAGCAGCAGCAATAGTATCT+TGG | + | chr8_4:54801575-54801594 | None:intergenic | 45.0% | |
GGAATTTCAGAGACAAGGTC+AGG | - | chr8_4:54801671-54801690 | Msa1334380:intron | 45.0% | |
GTCAATTGCTGCACAAACGT+AGG | - | chr8_4:54801784-54801803 | Msa1334380:intron | 45.0% | |
! | AGCTAGCACTGAAGATCCTA+TGG | - | chr8_4:54801887-54801906 | Msa1334380:intron | 45.0% |
! | CGTTTTCTCTGGGTAACACT+TGG | + | chr8_4:54801920-54801939 | None:intergenic | 45.0% |
! | GTACTCTCAGCGTTTTCTCT+GGG | + | chr8_4:54801930-54801949 | None:intergenic | 45.0% |
! | TGTACTCTCAGCGTTTTCTC+TGG | + | chr8_4:54801931-54801950 | None:intergenic | 45.0% |
GACAATGTCATCGATGACTC+GGG | + | chr8_4:54801990-54802009 | None:intergenic | 45.0% | |
GAGTCATCGATGACATTGTC+TGG | - | chr8_4:54801990-54802009 | Msa1334380:intron | 45.0% | |
AAAGTTGAGATCGGACATGG+AGG | - | chr8_4:54802053-54802072 | Msa1334380:intron | 45.0% | |
CTCACTCCAGAGAACATCAT+CGG | - | chr8_4:54802107-54802126 | Msa1334380:intron | 45.0% | |
TAGTCACCGATGATGTTCTC+TGG | + | chr8_4:54802116-54802135 | None:intergenic | 45.0% | |
!! | GGTCAAGTGCTGAAGAAACT+TGG | + | chr8_4:54802321-54802340 | None:intergenic | 45.0% |
GAGTTGCAGTAGCAGTCTAT+TGG | - | chr8_4:54802491-54802510 | Msa1334380:CDS | 45.0% | |
TCCTGTTGCAATTGAGTGCA+TGG | - | chr8_4:54802590-54802609 | Msa1334380:intron | 45.0% | |
ACCATGCACTCAATTGCAAC+AGG | + | chr8_4:54802594-54802613 | None:intergenic | 45.0% | |
TGCAATAGGACCAGGAACAA+CGG | + | chr8_4:54802619-54802638 | None:intergenic | 45.0% | |
ACTGTTGGGTCACTTGCAAT+AGG | + | chr8_4:54802633-54802652 | None:intergenic | 45.0% | |
ACTGTTGGCGCAGTTATAAC+AGG | + | chr8_4:54802672-54802691 | None:intergenic | 45.0% | |
TCATGAACAACGGCTACTGT+TGG | + | chr8_4:54802687-54802706 | None:intergenic | 45.0% | |
GCAACCTATTGTAACAGCTC+TGG | - | chr8_4:54802803-54802822 | Msa1334380:intron | 45.0% | |
! | GTAACAGCTCTGGTTACTAC+TGG | - | chr8_4:54802813-54802832 | Msa1334380:intron | 45.0% |
! | TTGAATGGTTGGCTCTTGCT+AGG | - | chr8_4:54803176-54803195 | Msa1334380:intron | 45.0% |
TGATCAAACAACCACTGACG+TGG | + | chr8_4:54803371-54803390 | None:intergenic | 45.0% | |
GGTGACTTTGCCAATGTACA+AGG | + | chr8_4:54803658-54803677 | None:intergenic | 45.0% | |
ATCAGTAAGACGACATGCAC+CGG | + | chr8_4:54803716-54803735 | None:intergenic | 45.0% | |
! | TGAGCTTTTCGGTTCATGCA+TGG | - | chr8_4:54804124-54804143 | Msa1334380:intron | 45.0% |
AGCTATGCCGCAATTCATTC+AGG | - | chr8_4:54804358-54804377 | Msa1334380:intron | 45.0% | |
TATGCCGCAATTCATTCAGG+TGG | - | chr8_4:54804361-54804380 | Msa1334380:intron | 45.0% | |
GAGACCACCTGAATGAATTG+CGG | + | chr8_4:54804368-54804387 | None:intergenic | 45.0% | |
!!! | TTAAGTAAATTTTTTTTATA+GGG | + | chr8_4:54794861-54794880 | None:intergenic | 5.0% |
!!! | TTTAAGTAAATTTTTTTTAT+AGG | + | chr8_4:54794862-54794881 | None:intergenic | 5.0% |
!!! | TTAAAATAAAGATTATATTT+TGG | - | chr8_4:54796314-54796333 | Msa1334380:intron | 5.0% |
!! | AAAAAATATAATTAAAATTC+GGG | + | chr8_4:54797361-54797380 | None:intergenic | 5.0% |
!! | CAAAAAATATAATTAAAATT+CGG | + | chr8_4:54797362-54797381 | None:intergenic | 5.0% |
!!! | TCTATTTTATTTTTATATAT+TGG | - | chr8_4:54798666-54798685 | Msa1334380:intron | 5.0% |
GAATCAACATCGCTGAGTGG+AGG | + | chr8_4:54788836-54788855 | None:intergenic | 50.0% | |
CATGAGCCCTTTCTCAAGAG+AGG | - | chr8_4:54788968-54788987 | Msa1334380:intron | 50.0% | |
AGATTGCTCCTGGTTGACAG+AGG | - | chr8_4:54789786-54789805 | Msa1334380:intron | 50.0% | |
GTGCGTACAGTCAGCTACAT+CGG | + | chr8_4:54789965-54789984 | None:intergenic | 50.0% | |
TGATAAGGGGTTGCAGCTAC+TGG | - | chr8_4:54790241-54790260 | Msa1334380:intron | 50.0% | |
GTCATTGCTACACACTGTCC+CGG | - | chr8_4:54790828-54790847 | Msa1334380:CDS | 50.0% | |
AAGATCAAGAGCCTGCAGTC+CGG | + | chr8_4:54790850-54790869 | None:intergenic | 50.0% | |
!! | GAGACCACCTGAATGGATTG+CGG | + | chr8_4:54790953-54790972 | None:intergenic | 50.0% |
! | AGAGCGCCTTGGTTAGGATT+AGG | + | chr8_4:54792264-54792283 | None:intergenic | 50.0% |
! | ATGAATAACGCAGAGCGCCT+TGG | + | chr8_4:54792275-54792294 | None:intergenic | 50.0% |
GGCAGTGCTAACTGGTTGAT+CGG | - | chr8_4:54792422-54792441 | Msa1334380:intron | 50.0% | |
GTTGATTGGATGGAAGAGGG+AGG | - | chr8_4:54795567-54795586 | Msa1334380:intron | 50.0% | |
TGATTGGATGGAAGAGGGAG+GGG | - | chr8_4:54795569-54795588 | Msa1334380:intron | 50.0% | |
CAAGAGTTTCTCGTAGAGGG+GGG | + | chr8_4:54795611-54795630 | None:intergenic | 50.0% | |
GAGGGGGAGAAATTCTTAGG+TGG | + | chr8_4:54795788-54795807 | None:intergenic | 50.0% | |
TATGGCCACGTGGAAATGGT+TGG | - | chr8_4:54795839-54795858 | Msa1334380:intron | 50.0% | |
AGCTGGAGGAGGAGAATTGT+GGG | + | chr8_4:54795867-54795886 | None:intergenic | 50.0% | |
TAGCTGGAGGAGGAGAATTG+TGG | + | chr8_4:54795868-54795887 | None:intergenic | 50.0% | |
!! | GGGTATCTCTAGGGTCTGTT+TGG | - | chr8_4:54795924-54795943 | Msa1334380:intron | 50.0% |
! | CGGTTGGTTGCACAATAGAG+AGG | + | chr8_4:54796452-54796471 | None:intergenic | 50.0% |
GACGAATCGTTCCCCATTCA+GGG | + | chr8_4:54797318-54797337 | None:intergenic | 50.0% | |
TGACGAATCGTTCCCCATTC+AGG | + | chr8_4:54797317-54797336 | None:intergenic | 50.0% | |
GACTAACGGAGTCTGCATTC+AGG | + | chr8_4:54797199-54797218 | None:intergenic | 50.0% | |
TGACGAATCGTTCCCCATTC+AGG | - | chr8_4:54797317-54797336 | Msa1334380:intron | 50.0% | |
GACGAATCGTTCCCCATTCA+GGG | - | chr8_4:54797318-54797337 | Msa1334380:intron | 50.0% | |
TTTCCTGAAGAAGAGGCCCT+TGG | - | chr8_4:54797397-54797416 | Msa1334380:intron | 50.0% | |
TTACCAAGGGCCTCTTCTTC+AGG | + | chr8_4:54797403-54797422 | None:intergenic | 50.0% | |
TCAATGGGAGGGACATCGTT+GGG | + | chr8_4:54799536-54799555 | None:intergenic | 50.0% | |
ATCAATGGGAGGGACATCGT+TGG | + | chr8_4:54799537-54799556 | None:intergenic | 50.0% | |
ACAGAACAACTGAAGGGCCA+CGG | - | chr8_4:54799572-54799591 | Msa1334380:intron | 50.0% | |
! | GATGGACTTGCTTCGCTTGA+TGG | - | chr8_4:54800280-54800299 | Msa1334380:intron | 50.0% |
CAAACAAAGGCTTAGCGCGT+TGG | - | chr8_4:54800318-54800337 | Msa1334380:intron | 50.0% | |
!! | TAGGTGCTACTTGACCAGTG+TGG | - | chr8_4:54800893-54800912 | Msa1334380:intron | 50.0% |
AGCTCGGTTGCAACAAGATC+AGG | - | chr8_4:54801389-54801408 | Msa1334380:intron | 50.0% | |
GAGCAAGCAACCACTACTAG+TGG | - | chr8_4:54801450-54801469 | Msa1334380:intron | 50.0% | |
TGCAACTGAGCCACTAGTAG+TGG | + | chr8_4:54801463-54801482 | None:intergenic | 50.0% | |
!! | ACCACTGGCTTAGTTGCAAC+AGG | - | chr8_4:54801511-54801530 | Msa1334380:intron | 50.0% |
TCCTGTTGCAACTAAGCCAG+TGG | + | chr8_4:54801515-54801534 | None:intergenic | 50.0% | |
GGCTTAGTTGCAACAGGATC+AGG | - | chr8_4:54801517-54801536 | Msa1334380:intron | 50.0% | |
GGACATGAACTCTATGCCAG+GGG | + | chr8_4:54801554-54801573 | None:intergenic | 50.0% | |
TTCTGTGATAGCCACGTCAG+TGG | - | chr8_4:54803357-54803376 | Msa1334380:intron | 50.0% | |
GTGCTGCAACTTCAGCAATG+TGG | - | chr8_4:54803607-54803626 | Msa1334380:intron | 50.0% | |
! | AGCTTGTTTGTTGGCCAACC+TGG | + | chr8_4:54805261-54805280 | None:intergenic | 50.0% |
GCGCTTGGAAGAGGAAGAAG+AGG | + | chr8_4:54789056-54789075 | None:intergenic | 55.0% | |
CGTACAGTCAGCTACATCGG+TGG | + | chr8_4:54789962-54789981 | None:intergenic | 55.0% | |
GTGCTGCAACTTGACCAGTG+TGG | - | chr8_4:54790116-54790135 | Msa1334380:CDS | 55.0% | |
AAGACGGCAAGCACCAGTGA+GGG | + | chr8_4:54790219-54790238 | None:intergenic | 55.0% | |
TAAGACGGCAAGCACCAGTG+AGG | + | chr8_4:54790220-54790239 | None:intergenic | 55.0% | |
AGATCAAGAGCCTGCAGTCC+GGG | + | chr8_4:54790849-54790868 | None:intergenic | 55.0% | |
ACCTCTGCCGCAATCCATTC+AGG | - | chr8_4:54790943-54790962 | Msa1334380:intron | 55.0% | |
!! | ACCTGAATGGATTGCGGCAG+AGG | + | chr8_4:54790947-54790966 | None:intergenic | 55.0% |
TCTGCCGCAATCCATTCAGG+TGG | - | chr8_4:54790946-54790965 | Msa1334380:intron | 55.0% | |
GGAGATGACCGGCAAATCCT+TGG | - | chr8_4:54791398-54791417 | Msa1334380:intron | 55.0% | |
AGGTTGTCTGTTGGCCAACC+TGG | + | chr8_4:54791903-54791922 | None:intergenic | 55.0% | |
! | TAACGCAGAGCGCCTTGGTT+AGG | + | chr8_4:54792270-54792289 | None:intergenic | 55.0% |
AACACGGTGGCAGTGCTAAC+TGG | - | chr8_4:54792414-54792433 | Msa1334380:intron | 55.0% | |
! | CAGGGCTAGCACCATATGCT+TGG | - | chr8_4:54792749-54792768 | Msa1334380:intron | 55.0% |
GCTGGAGGAGGAGAATTGTG+GGG | + | chr8_4:54795866-54795885 | None:intergenic | 55.0% | |
GGGGTCCAATCATTGACACG+TGG | + | chr8_4:54796807-54796826 | None:intergenic | 55.0% | |
GGACATCGTTGGGATTGGGT+GGG | + | chr8_4:54799526-54799545 | None:intergenic | 55.0% | |
GGAGGGACATCGTTGGGATT+GGG | + | chr8_4:54799530-54799549 | None:intergenic | 55.0% | |
GAAGACGCGTGATCAGAGTC+AGG | + | chr8_4:54799722-54799741 | None:intergenic | 55.0% | |
CCAATGTGGTTGTCGCCGAA+TGG | + | chr8_4:54800647-54800666 | None:intergenic | 55.0% | |
CCATTCGGCGACAACCACAT+TGG | - | chr8_4:54800644-54800663 | Msa1334380:intron | 55.0% | |
ACTGCTGACACGGTTGCATG+AGG | - | chr8_4:54801344-54801363 | Msa1334380:intron | 55.0% | |
TCAGGAACAATGACGACCCC+TGG | - | chr8_4:54801535-54801554 | Msa1334380:intron | 55.0% | |
CTCTCAGTGACTTCTGTCGG+TGG | - | chr8_4:54802275-54802294 | Msa1334380:CDS | 55.0% | |
TGCATGGTAGCCGTTGTTCC+TGG | - | chr8_4:54802606-54802625 | Msa1334380:intron | 55.0% | |
GGGTCACTTGCAATAGGACC+AGG | + | chr8_4:54802627-54802646 | None:intergenic | 55.0% | |
GGCGCAGTTATAACAGGCTC+AGG | + | chr8_4:54802666-54802685 | None:intergenic | 55.0% | |
TCGATAGCTGCTCGTCGTTG+AGG | - | chr8_4:54805368-54805387 | Msa1334380:CDS | 55.0% | |
TACACACTGTCCCGGACTGC+AGG | - | chr8_4:54790836-54790855 | Msa1334380:CDS | 60.0% | |
TGGATGGAAGAGGGAGGGGT+TGG | - | chr8_4:54795573-54795592 | Msa1334380:intron | 60.0% | |
TCGTAGAGGGGGGCGATCAT+GGG | + | chr8_4:54795601-54795620 | None:intergenic | 60.0% | |
GGGGTCCAACCATTTCCACG+TGG | + | chr8_4:54795847-54795866 | None:intergenic | 60.0% | |
GGGACATCGTTGGGATTGGG+TGG | + | chr8_4:54799527-54799546 | None:intergenic | 60.0% | |
GGGAGGGACATCGTTGGGAT+TGG | + | chr8_4:54799531-54799550 | None:intergenic | 60.0% | |
CTCGTAGAGGGGGGCGATCA+TGG | + | chr8_4:54795602-54795621 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 54788707 | 54805761 | 54788707 | ID=Msa1334380;Name=Msa1334380 |
chr8_4 | mRNA | 54788707 | 54805761 | 54788707 | ID=Msa1334380-mRNA-1;Parent=Msa1334380;Name=Msa1334380-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0.69|0.42|1|0.61|0.57|14|68|1309 |
chr8_4 | exon | 54788707 | 54788912 | 54788707 | ID=Msa1334380-mRNA-1:exon:17116;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54789051 | 54789206 | 54789051 | ID=Msa1334380-mRNA-1:exon:17115;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54789554 | 54789629 | 54789554 | ID=Msa1334380-mRNA-1:exon:17114;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54790089 | 54790250 | 54790089 | ID=Msa1334380-mRNA-1:exon:17113;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54790428 | 54790623 | 54790428 | ID=Msa1334380-mRNA-1:exon:17112;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54790651 | 54790861 | 54790651 | ID=Msa1334380-mRNA-1:exon:17111;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54793982 | 54794979 | 54793982 | ID=Msa1334380-mRNA-1:exon:17110;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54802183 | 54802297 | 54802183 | ID=Msa1334380-mRNA-1:exon:17109;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54802409 | 54802564 | 54802409 | ID=Msa1334380-mRNA-1:exon:17108;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54803019 | 54803094 | 54803019 | ID=Msa1334380-mRNA-1:exon:17107;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54803504 | 54803610 | 54803504 | ID=Msa1334380-mRNA-1:exon:17106;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54803936 | 54804114 | 54803936 | ID=Msa1334380-mRNA-1:exon:17105;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54804142 | 54804352 | 54804142 | ID=Msa1334380-mRNA-1:exon:17104;Parent=Msa1334380-mRNA-1 |
chr8_4 | exon | 54804613 | 54805761 | 54804613 | ID=Msa1334380-mRNA-1:exon:17103;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54804613 | 54805761 | 54804613 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54804142 | 54804352 | 54804142 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54803936 | 54804114 | 54803936 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54803504 | 54803610 | 54803504 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54803019 | 54803094 | 54803019 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54802409 | 54802564 | 54802409 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54802183 | 54802297 | 54802183 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54793982 | 54794979 | 54793982 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54790651 | 54790861 | 54790651 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54790428 | 54790623 | 54790428 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54790089 | 54790250 | 54790089 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54789554 | 54789629 | 54789554 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54789051 | 54789206 | 54789051 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | CDS | 54788775 | 54788912 | 54788775 | ID=Msa1334380-mRNA-1:cds;Parent=Msa1334380-mRNA-1 |
chr8_4 | three_prime_UTR | 54788707 | 54788774 | 54788707 | ID=Msa1334380-mRNA-1:three_prime_utr;Parent=Msa1334380-mRNA-1 |
Gene Sequence |
Protein sequence |