AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1337140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1337140 MtrunA17_Chr4g0061381 97.643 297 7 0 1 297 1 297 0.0 600
Msa1337140 MtrunA17_Chr3g0086691 71.854 302 78 4 1 297 1 300 1.25e-144 416
Msa1337140 MtrunA17_Chr3g0086661 72.517 302 76 4 1 297 1 300 1.94e-139 403
Msa1337140 MtrunA17_Chr3g0086651 72.517 302 76 4 1 297 1 300 2.38e-139 403
Msa1337140 MtrunA17_Chr3g0094171 48.162 272 129 5 31 297 40 304 6.62e-80 251
Msa1337140 MtrunA17_Chr3g0094231 46.182 275 127 7 31 297 36 297 3.98e-78 246
Msa1337140 MtrunA17_Chr8g0344151 38.889 270 157 3 31 296 36 301 1.46e-64 211
Msa1337140 MtrunA17_Chr8g0344181 37.638 271 159 4 31 296 38 303 1.31e-58 195
Msa1337140 MtrunA17_Chr8g0344191 35.235 298 185 4 3 296 41 334 7.01e-57 191
Msa1337140 MtrunA17_Chr7g0254641 35.740 277 163 4 31 297 37 308 3.48e-56 189
Msa1337140 MtrunA17_Chr3g0116681 35.986 289 176 5 11 297 20 301 8.24e-56 188
Msa1337140 MtrunA17_Chr3g0101601 37.294 303 159 9 7 297 11 294 5.11e-55 186
Msa1337140 MtrunA17_Chr6g0484841 36.232 276 154 6 32 297 38 301 4.28e-54 183
Msa1337140 MtrunA17_Chr5g0431641 34.343 297 174 6 11 297 13 298 6.34e-54 182
Msa1337140 MtrunA17_Chr8g0390881 35.922 309 169 9 3 296 7 301 1.37e-53 182
Msa1337140 MtrunA17_Chr3g0101621 37.742 310 158 10 1 297 1 288 1.82e-53 181
Msa1337140 MtrunA17_Chr6g0484811 35.197 304 174 7 4 297 12 302 2.72e-53 181
Msa1337140 MtrunA17_Chr3g0101691 36.610 295 165 6 3 286 8 291 3.56e-53 181
Msa1337140 MtrunA17_Chr3g0101651 37.500 264 152 3 31 292 38 290 2.35e-52 179
Msa1337140 MtrunA17_Chr3g0101631 35.144 313 168 9 1 297 1 294 8.51e-52 177
Msa1337140 MtrunA17_Chr5g0445531 35.294 272 159 5 31 297 38 297 1.93e-50 173
Msa1337140 MtrunA17_Chr1g0174421 31.333 300 190 5 6 297 22 313 2.32e-50 169
Msa1337140 MtrunA17_Chr3g0101711 33.987 306 180 6 3 297 8 302 3.32e-50 173
Msa1337140 MtrunA17_Chr4g0058191 36.029 272 153 6 35 297 29 288 3.77e-50 172
Msa1337140 MtrunA17_Chr1g0156081 35.094 265 160 5 25 277 50 314 1.01e-49 172
Msa1337140 MtrunA17_Chr1g0156101 35.271 258 155 5 32 277 33 290 1.09e-49 172
Msa1337140 MtrunA17_Chr5g0445381 35.273 275 162 4 28 297 66 329 1.44e-49 172
Msa1337140 MtrunA17_Chr5g0445441 35.036 274 158 5 31 297 79 339 5.55e-49 170
Msa1337140 MtrunA17_Chr3g0101581 31.579 285 173 5 6 278 8 282 5.59e-49 169
Msa1337140 MtrunA17_Chr5g0405001 33.108 296 180 6 2 291 16 299 1.04e-48 169
Msa1337140 MtrunA17_Chr5g0445751 32.639 288 177 5 16 297 28 304 1.45e-48 164
Msa1337140 MtrunA17_Chr8g0372251 32.714 269 163 5 30 291 34 291 1.75e-48 168
Msa1337140 MtrunA17_Chr4g0024771 32.566 304 181 6 7 297 6 298 2.29e-48 168
Msa1337140 MtrunA17_Chr5g0445451 34.191 272 163 4 31 297 38 298 3.07e-48 167
Msa1337140 MtrunA17_Chr3g0101611 32.482 274 164 4 31 295 38 299 3.49e-48 167
Msa1337140 MtrunA17_Chr5g0401681 34.307 274 164 5 31 297 32 296 5.86e-48 167
Msa1337140 MtrunA17_Chr5g0431671 34.420 276 164 5 28 297 35 299 7.03e-48 167
Msa1337140 MtrunA17_Chr4g0058201 34.432 273 163 5 31 297 28 290 8.47e-48 166
Msa1337140 MtrunA17_Chr1g0162801 33.660 306 178 9 5 297 8 301 1.51e-47 166
Msa1337140 MtrunA17_Chr2g0310391 35.955 267 156 4 5 268 6 260 2.00e-47 165
Msa1337140 MtrunA17_Chr5g0403351 32.143 280 165 6 31 297 34 301 4.05e-47 165
Msa1337140 MtrunA17_Chr2g0310381 35.531 273 161 5 31 297 28 291 4.41e-47 164
Msa1337140 MtrunA17_Chr8g0382901 35.688 269 163 4 31 297 492 752 4.55e-47 169
Msa1337140 MtrunA17_Chr8g0382901 32.971 276 156 6 26 297 23 273 4.84e-40 148
Msa1337140 MtrunA17_Chr4g0058231 35.498 231 137 3 32 259 29 250 8.29e-47 164
Msa1337140 MtrunA17_Chr7g0258221 32.046 259 166 3 4 260 8 258 8.85e-47 164
Msa1337140 MtrunA17_Chr3g0086671 70.175 114 26 3 184 295 1 108 9.53e-47 154
Msa1337140 MtrunA17_Chr3g0101571 31.387 274 169 5 31 297 36 297 1.19e-46 163
Msa1337140 MtrunA17_Chr3g0101701 34.164 281 163 6 28 297 34 303 1.33e-46 163
Msa1337140 MtrunA17_Chr4g0057001 34.138 290 180 5 13 297 31 314 1.67e-46 163
Msa1337140 MtrunA17_Chr4g0047641 34.909 275 161 6 31 297 50 314 2.73e-46 163
Msa1337140 MtrunA17_Chr5g0446151 34.686 271 162 5 31 297 41 300 2.88e-46 162
Msa1337140 MtrunA17_Chr3g0101761 31.561 301 184 6 7 297 11 299 3.56e-46 162
Msa1337140 MtrunA17_Chr5g0445461 33.824 272 164 4 31 297 38 298 5.97e-46 161
Msa1337140 MtrunA17_Chr5g0446161 35.200 250 149 4 31 278 41 279 8.32e-46 161
Msa1337140 MtrunA17_Chr1g0167321 34.843 287 164 7 22 297 24 298 1.57e-45 160
Msa1337140 MtrunA17_Chr8g0361471 34.586 266 151 4 31 294 34 278 2.70e-45 160
Msa1337140 MtrunA17_Chr4g0035921 33.333 267 165 5 1 267 8 261 2.86e-45 160
Msa1337140 MtrunA17_Chr1g0174461 32.459 305 183 8 4 297 12 304 3.90e-45 159
Msa1337140 MtrunA17_Chr6g0466331 34.586 266 151 4 31 294 34 278 6.58e-45 159
Msa1337140 MtrunA17_Chr4g0047661 35.249 261 147 6 31 279 48 298 6.97e-45 159
Msa1337140 MtrunA17_Chr5g0430101 32.967 273 165 4 32 297 37 298 1.22e-44 158
Msa1337140 MtrunA17_Chr3g0101661 34.058 276 162 5 31 297 38 302 1.25e-44 158
Msa1337140 MtrunA17_Chr1g0162811 32.362 309 184 7 2 297 3 299 1.85e-44 157
Msa1337140 MtrunA17_Chr6g0465511 34.586 266 151 4 31 294 34 278 1.93e-44 157
Msa1337140 MtrunA17_Chr3g0116741 31.353 303 188 8 2 297 24 313 2.50e-44 157
Msa1337140 MtrunA17_Chr3g0101751 33.213 277 163 8 31 297 42 306 2.53e-44 157
Msa1337140 MtrunA17_Chr4g0047691 33.577 274 163 6 31 297 52 313 6.14e-44 156
Msa1337140 MtrunA17_Chr5g0445421 34.686 271 142 4 31 297 112 351 6.15e-44 157
Msa1337140 MtrunA17_Chr4g0052861 34.066 273 164 5 31 296 32 295 6.57e-44 156
Msa1337140 MtrunA17_Chr5g0403331 30.508 295 175 7 1 279 5 285 7.28e-44 156
Msa1337140 MtrunA17_Chr3g0101811 31.408 277 171 5 1 269 1 266 7.97e-44 156
Msa1337140 MtrunA17_Chr3g0101821 30.897 301 186 6 7 297 11 299 8.54e-44 156
Msa1337140 MtrunA17_Chr1g0205361 31.818 286 182 4 1 280 4 282 8.92e-44 155
Msa1337140 MtrunA17_Chr8g0357421 30.464 302 188 6 6 297 10 299 2.71e-43 154
Msa1337140 MtrunA17_Chr5g0430091 33.455 275 163 4 32 297 38 301 2.76e-43 154
Msa1337140 MtrunA17_Chr3g0101721 30.464 302 186 6 8 297 12 301 3.06e-43 154
Msa1337140 MtrunA17_Chr4g0030701 33.566 286 168 5 26 297 30 307 3.63e-43 154
Msa1337140 MtrunA17_Chr5g0430111 32.971 276 163 5 32 297 38 301 3.68e-43 152
Msa1337140 MtrunA17_Chr1g0174481 31.046 306 192 5 1 297 4 299 4.66e-43 154
Msa1337140 MtrunA17_Chr1g0160851 31.338 284 182 5 2 279 5 281 4.75e-43 154
Msa1337140 MtrunA17_Chr3g0101831 32.210 267 168 3 25 289 31 286 5.26e-43 154
Msa1337140 MtrunA17_Chr5g0430031 31.273 275 169 4 32 297 38 301 5.64e-43 154
Msa1337140 MtrunA17_Chr4g0047631 34.307 274 161 6 31 297 49 310 6.22e-43 154
Msa1337140 MtrunA17_Chr8g0357431 30.888 259 164 4 6 260 10 257 8.37e-43 153
Msa1337140 MtrunA17_Chr4g0053621 33.213 277 168 4 14 279 14 284 1.10e-42 153
Msa1337140 MtrunA17_Chr5g0430131 34.058 276 159 5 32 297 38 300 1.20e-42 153
Msa1337140 MtrunA17_Chr5g0430081 33.091 275 164 5 32 297 36 299 2.36e-42 152
Msa1337140 MtrunA17_Chr2g0280261 34.483 232 139 4 31 260 34 254 3.12e-42 151
Msa1337140 MtrunA17_Chr4g0020041 34.615 286 165 9 22 297 27 300 5.65e-42 151
Msa1337140 MtrunA17_Chr6g0472311 31.802 283 166 5 32 297 42 314 7.15e-42 151
Msa1337140 MtrunA17_Chr1g0174451 30.065 306 190 8 4 297 12 305 1.33e-41 150
Msa1337140 MtrunA17_Chr1g0205371 30.282 284 185 5 2 279 6 282 1.43e-41 150
Msa1337140 MtrunA17_Chr7g0224551 30.449 312 185 7 1 297 1 295 1.85e-41 150
Msa1337140 MtrunA17_Chr4g0046691 32.479 234 149 2 32 263 40 266 2.27e-41 145
Msa1337140 MtrunA17_Chr7g0235551 31.636 275 172 4 31 296 33 300 2.29e-41 149
Msa1337140 MtrunA17_Chr4g0052881 33.716 261 159 4 31 283 32 286 3.74e-41 149
Msa1337140 MtrunA17_Chr7g0224561 30.449 312 185 7 1 297 1 295 3.86e-41 149
Msa1337140 MtrunA17_Chr5g0401691 32.660 297 185 5 4 297 27 311 4.25e-41 149
Msa1337140 MtrunA17_Chr4g0011931 33.984 256 155 5 32 280 30 278 4.66e-41 144
Msa1337140 MtrunA17_Chr3g0101671 32.491 277 166 4 31 297 38 303 5.59e-41 148
Msa1337140 MtrunA17_Chr8g0356001 33.333 273 167 4 31 297 41 304 5.61e-41 148
Msa1337140 MtrunA17_Chr3g0101731 29.720 286 180 5 4 279 8 282 6.50e-41 148
Msa1337140 MtrunA17_Chr6g0463801 33.913 230 139 4 31 258 37 255 6.75e-41 148
Msa1337140 MtrunA17_Chr4g0011921 33.725 255 155 5 32 279 30 277 8.80e-41 147
Msa1337140 MtrunA17_Chr7g0218601 31.338 284 179 6 22 297 25 300 1.04e-40 147
Msa1337140 MtrunA17_Chr5g0403321 30.566 265 157 5 31 279 34 287 1.17e-40 147
Msa1337140 MtrunA17_Chr3g0084921 29.450 309 191 8 4 297 10 306 1.22e-40 147
Msa1337140 MtrunA17_Chr4g0076161 30.363 303 186 6 8 297 7 297 1.61e-40 147
Msa1337140 MtrunA17_Chr8g0355961 31.270 307 190 6 1 297 9 304 2.33e-40 147
Msa1337140 MtrunA17_Chr6g0463791 29.682 283 178 5 8 280 7 278 2.43e-40 146
Msa1337140 MtrunA17_Chr4g0052851 36.264 273 150 7 31 297 33 287 2.66e-40 146
Msa1337140 MtrunA17_Chr4g0011861 30.739 257 163 6 32 280 30 279 2.89e-40 142
Msa1337140 MtrunA17_Chr2g0304871 32.155 283 173 7 26 295 34 310 4.72e-40 146
Msa1337140 MtrunA17_Chr5g0419691 30.350 257 163 6 32 280 30 278 7.82e-40 145
Msa1337140 MtrunA17_Chr4g0056951 36.398 261 153 5 43 297 56 309 8.19e-40 145
Msa1337140 MtrunA17_Chr3g0101801 27.208 283 185 4 7 279 18 289 8.80e-40 145
Msa1337140 MtrunA17_Chr2g0296651 32.459 305 189 5 1 297 1 296 1.67e-39 144
Msa1337140 MtrunA17_Chr4g0011881 31.624 234 149 4 30 259 29 255 2.22e-39 144
Msa1337140 MtrunA17_Chr1g0174441 32.013 303 173 10 4 293 31 313 2.79e-39 144
Msa1337140 MtrunA17_Chr7g0265611 30.182 275 178 4 31 297 46 314 9.81e-39 142
Msa1337140 MtrunA17_Chr7g0246131 30.872 298 193 4 4 293 6 298 1.58e-38 142
Msa1337140 MtrunA17_Chr4g0011871 29.961 257 165 6 32 280 30 279 2.96e-38 140
Msa1337140 MtrunA17_Chr5g0402971 29.242 277 165 6 32 293 41 301 3.33e-38 137
Msa1337140 MtrunA17_Chr5g0406651 32.558 258 160 5 30 280 29 279 3.34e-38 140
Msa1337140 MtrunA17_Chr8g0362701 28.788 264 174 5 42 297 46 303 3.52e-38 140
Msa1337140 MtrunA17_Chr4g0046631 32.374 278 164 7 32 295 47 314 4.19e-38 140
Msa1337140 MtrunA17_Chr1g0207851 33.784 222 131 4 42 258 49 259 4.33e-38 137
Msa1337140 MtrunA17_Chr4g0039901 30.038 263 171 3 23 279 27 282 4.53e-38 140
Msa1337140 MtrunA17_Chr1g0174471 30.065 306 190 7 4 297 27 320 5.78e-38 140
Msa1337140 MtrunA17_Chr8g0362481 32.917 240 147 5 66 297 1 234 6.25e-38 139
Msa1337140 MtrunA17_Chr7g0246221 31.786 280 178 4 4 276 8 281 1.06e-37 139
Msa1337140 MtrunA17_Chr4g0017411 33.993 303 175 7 1 297 1 284 1.58e-37 139
Msa1337140 MtrunA17_Chr1g0200961 30.392 306 185 8 4 297 6 295 2.18e-37 138
Msa1337140 MtrunA17_Chr8g0339311 32.271 251 159 3 54 295 69 317 3.28e-37 138
Msa1337140 MtrunA17_Chr4g0011961 32.046 259 155 7 32 280 30 277 3.95e-37 137
Msa1337140 MtrunA17_Chr1g0156061 47.445 137 71 1 25 160 49 185 7.21e-37 136
Msa1337140 MtrunA17_Chr2g0314721 30.769 273 173 4 31 297 44 306 8.63e-37 137
Msa1337140 MtrunA17_Chr4g0011901 32.234 273 170 6 32 297 30 294 9.59e-37 137
Msa1337140 MtrunA17_Chr7g0218611 32.270 282 175 6 24 297 26 299 1.11e-36 136
Msa1337140 MtrunA17_Chr4g0058261 31.655 278 165 7 33 297 64 329 1.28e-36 137
Msa1337140 MtrunA17_Chr4g0058281 28.947 304 199 6 2 297 17 311 1.45e-36 136
Msa1337140 MtrunA17_Chr1g0207841 31.878 229 141 3 42 265 49 267 3.44e-36 135
Msa1337140 MtrunA17_Chr6g0451781 32.852 277 166 5 38 297 81 354 3.99e-36 135
Msa1337140 MtrunA17_Chr5g0430171 34.146 205 119 3 32 234 38 228 4.83e-36 129
Msa1337140 MtrunA17_Chr2g0314731 29.000 300 191 5 10 297 6 295 7.76e-36 134
Msa1337140 MtrunA17_Chr4g0030711 31.915 282 169 5 31 297 37 310 1.69e-35 134
Msa1337140 MtrunA17_Chr6g0463611 25.352 284 195 5 2 279 19 291 5.61e-35 129
Msa1337140 MtrunA17_Chr5g0395331 32.384 281 173 6 25 297 31 302 7.54e-35 132
Msa1337140 MtrunA17_Chr4g0011981 31.783 258 156 6 32 279 30 277 7.95e-35 131
Msa1337140 MtrunA17_Chr2g0296661 33.333 255 158 4 38 283 39 290 1.67e-34 130
Msa1337140 MtrunA17_Chr7g0258211 30.916 262 170 5 40 297 48 302 2.13e-34 130
Msa1337140 MtrunA17_Chr4g0008101 31.698 265 160 5 32 277 40 302 3.48e-34 130
Msa1337140 MtrunA17_Chr7g0255531 27.645 293 196 6 7 288 3 290 4.90e-34 129
Msa1337140 MtrunA17_Chr4g0046671 29.355 310 193 9 3 295 14 314 6.84e-34 125
Msa1337140 MtrunA17_Chr6g0451691 28.333 300 186 5 2 277 12 306 7.86e-34 129
Msa1337140 MtrunA17_Chr4g0039391 32.540 252 157 5 40 283 44 290 1.12e-33 128
Msa1337140 MtrunA17_Chr6g0466941 30.545 275 178 4 6 269 8 280 1.22e-33 128
Msa1337140 MtrunA17_Chr1g0176831 28.477 302 199 5 2 297 35 325 1.39e-33 128
Msa1337140 MtrunA17_Chr6g0451801 29.787 282 177 5 14 277 24 302 1.55e-33 125
Msa1337140 MtrunA17_Chr5g0431501 29.845 258 163 6 31 278 33 282 3.05e-33 127
Msa1337140 MtrunA17_Chr5g0431461 29.845 258 163 6 31 278 33 282 3.05e-33 127
Msa1337140 MtrunA17_Chr3g0101741 29.536 237 151 5 66 297 1 226 4.66e-33 125
Msa1337140 MtrunA17_Chr6g0466901 29.412 255 162 4 38 276 41 293 6.57e-33 126
Msa1337140 MtrunA17_Chr6g0451751 30.070 286 174 6 32 297 42 321 1.63e-32 125
Msa1337140 MtrunA17_Chr8g0339331 29.562 274 181 8 32 295 39 310 1.30e-31 123
Msa1337140 MtrunA17_Chr4g0030741 29.104 268 163 6 40 297 73 323 1.31e-31 120
Msa1337140 MtrunA17_Chr3g0107561 30.325 277 176 7 31 295 45 316 1.74e-31 119
Msa1337140 MtrunA17_Chr3g0105751 29.874 318 188 11 3 297 15 320 2.42e-31 120
Msa1337140 MtrunA17_Chr5g0445411 40.458 131 76 1 31 159 45 175 5.31e-31 114
Msa1337140 MtrunA17_Chr6g0458561 28.710 310 195 11 2 295 24 323 5.99e-31 121
Msa1337140 MtrunA17_Chr1g0197891 28.777 278 180 5 26 297 29 294 6.29e-31 120
Msa1337140 MtrunA17_Chr6g0451741 28.481 316 197 6 5 297 34 343 1.05e-30 120
Msa1337140 MtrunA17_Chr5g0431511 29.231 260 162 6 31 278 33 282 1.33e-30 120
Msa1337140 MtrunA17_Chr1g0164211 30.802 237 154 3 31 265 31 259 2.49e-30 119
Msa1337140 MtrunA17_Chr1g0197851 27.723 303 201 5 1 297 4 294 4.14e-30 118
Msa1337140 MtrunA17_Chr5g0395321 27.397 292 189 4 4 289 18 292 5.84e-30 118
Msa1337140 MtrunA17_Chr1g0197881 27.723 303 200 6 1 297 4 293 9.92e-30 117
Msa1337140 MtrunA17_Chr5g0419451 29.412 289 177 9 18 297 47 317 1.57e-29 117
Msa1337140 MtrunA17_Chr8g0370641 30.108 279 177 7 31 295 40 314 1.71e-29 117
Msa1337140 MtrunA17_Chr8g0370651 29.508 305 187 8 15 293 21 323 2.13e-29 117
Msa1337140 MtrunA17_Chr2g0310371 39.310 145 84 1 5 149 6 146 2.32e-29 109
Msa1337140 MtrunA17_Chr1g0197871 27.857 280 184 5 24 297 27 294 2.92e-29 116
Msa1337140 MtrunA17_Chr6g0451641 28.115 313 196 9 9 297 11 318 3.23e-29 116
Msa1337140 MtrunA17_Chr7g0246181 31.673 281 181 4 4 277 6 282 1.45e-27 111
Msa1337140 MtrunA17_Chr8g0346261 31.734 271 164 8 33 297 86 341 2.84e-27 110
Msa1337140 MtrunA17_Chr8g0351801 30.769 234 148 5 41 269 44 268 4.79e-27 110
Msa1337140 MtrunA17_Chr3g0082701 28.736 261 162 5 38 277 46 303 6.88e-27 109
Msa1337140 MtrunA17_Chr8g0377341 31.136 273 163 10 34 297 70 326 7.43e-27 109
Msa1337140 MtrunA17_Chr1g0213671 30.233 215 137 5 31 238 34 242 4.18e-26 107
Msa1337140 MtrunA17_Chr5g0395381 26.578 301 167 4 6 289 4 267 9.22e-26 106
Msa1337140 MtrunA17_Chr7g0246121 32.374 278 177 4 4 276 8 279 2.24e-25 105
Msa1337140 MtrunA17_Chr3g0107611 27.036 307 204 6 4 295 25 326 6.71e-25 104
Msa1337140 MtrunA17_Chr5g0432751 29.710 276 175 7 11 276 15 281 1.81e-24 102
Msa1337140 MtrunA17_Chr3g0107541 29.520 271 168 9 40 295 59 321 4.19e-24 102
Msa1337140 MtrunA17_Chr7g0246151 29.866 298 194 6 4 293 6 296 9.12e-24 100
Msa1337140 MtrunA17_Chr5g0431631 36.232 138 80 2 9 138 22 159 2.55e-23 93.6
Msa1337140 MtrunA17_Chr6g0484771 34.677 124 79 1 66 187 1 124 1.03e-21 89.0
Msa1337140 MtrunA17_Chr4g0046321 23.509 285 184 9 29 297 32 298 2.00e-21 94.0
Msa1337140 MtrunA17_Chr1g0200951 29.167 264 166 10 34 285 64 318 4.85e-21 92.8
Msa1337140 MtrunA17_Chr6g0451681 32.919 161 104 2 5 163 37 195 9.98e-21 92.0
Msa1337140 MtrunA17_Chr1g0210091 30.290 241 145 9 40 267 74 304 1.15e-20 92.0
Msa1337140 MtrunA17_Chr4g0046331 22.456 285 187 9 29 297 32 298 2.96e-20 90.5
Msa1337140 MtrunA17_Chr3g0117321 34.188 117 77 0 33 149 9 125 3.13e-20 84.3
Msa1337140 MtrunA17_Chr4g0046351 22.456 285 187 9 29 297 32 298 3.71e-20 90.5
Msa1337140 MtrunA17_Chr5g0430051 47.436 78 41 0 32 109 39 116 2.17e-19 82.0
Msa1337140 MtrunA17_Chr5g0431601 43.373 83 46 1 66 148 1 82 3.57e-18 77.4
Msa1337140 MtrunA17_Chr2g0314771 29.268 164 107 2 66 227 1 157 4.70e-18 79.7
Msa1337140 MtrunA17_Chr6g0451761 26.538 260 147 7 32 277 42 271 4.11e-17 79.7
Msa1337140 MtrunA17_Chr5g0445541 37.500 96 53 2 11 99 13 108 1.40e-16 75.1
Msa1337140 MtrunA17_Chr2g0280001 31.765 170 103 4 1 162 34 198 1.23e-14 71.6
Msa1337140 MtrunA17_Chr1g0176851 27.419 186 119 4 118 297 2 177 1.34e-14 71.6
Msa1337140 MtrunA17_Chr1g0198191 25.177 282 199 5 4 281 18 291 1.35e-13 70.9
Msa1337140 MtrunA17_Chr2g0280051 25.685 292 190 7 6 285 49 325 1.37e-13 70.1
Msa1337140 MtrunA17_Chr5g0445341 36.471 85 53 1 66 149 1 85 4.01e-13 63.9
Msa1337140 MtrunA17_Chr2g0280071 25.090 279 185 6 1 269 34 298 1.40e-12 68.2
Msa1337140 MtrunA17_Chr4g0076181 45.312 64 35 0 66 129 1 64 6.19e-12 62.8
Msa1337140 MtrunA17_Chr2g0310361 28.873 142 90 3 159 297 4 137 7.36e-12 62.0
Msa1337140 MtrunA17_Chr2g0280081 26.378 254 161 6 55 296 558 797 9.81e-12 65.5
Msa1337140 MtrunA17_Chr1g0176861 35.632 87 55 1 4 90 11 96 4.65e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1337140 AT5G07990.1 60.797 301 106 4 4 297 1 296 1.57e-130 381
Msa1337140 AT5G06900.1 36.027 297 179 7 5 297 9 298 3.53e-57 192
Msa1337140 AT1G01280.1 36.634 303 177 5 4 297 5 301 4.95e-50 173
Msa1337140 AT3G48280.1 32.886 298 183 6 1 296 2 284 7.05e-50 172
Msa1337140 AT3G48310.1 33.200 250 154 3 32 280 33 270 4.93e-49 170
Msa1337140 AT3G26310.1 36.000 275 161 6 28 297 30 294 9.03e-49 169
Msa1337140 AT3G48320.1 33.200 250 154 3 32 280 33 270 1.34e-48 169
Msa1337140 AT5G04330.1 35.484 279 161 7 30 297 31 301 1.44e-48 169
Msa1337140 AT1G13080.1 34.983 303 176 10 4 297 8 298 5.67e-48 167
Msa1337140 AT3G48290.1 34.800 250 150 4 32 280 34 271 8.58e-48 166
Msa1337140 AT3G48290.2 34.800 250 150 4 32 280 34 271 1.47e-47 166
Msa1337140 AT4G36220.1 35.498 231 137 3 38 268 47 265 2.11e-47 166
Msa1337140 AT4G13310.2 32.806 253 157 3 31 278 32 276 9.80e-47 161
Msa1337140 AT3G48300.1 35.102 245 146 4 33 276 31 263 1.01e-46 164
Msa1337140 AT3G48300.2 35.102 245 146 4 33 276 33 265 1.05e-46 164
Msa1337140 AT3G26300.1 35.055 271 164 6 32 297 32 295 2.22e-46 163
Msa1337140 AT4G37310.1 34.219 301 185 7 5 297 4 299 2.91e-46 163
Msa1337140 AT3G48270.1 33.465 254 153 5 26 278 29 267 4.43e-46 162
Msa1337140 AT4G13310.1 32.806 253 157 3 31 278 32 276 1.07e-45 161
Msa1337140 AT4G20240.2 34.231 260 154 6 25 279 29 276 1.58e-44 156
Msa1337140 AT4G13290.1 30.682 264 170 3 20 278 22 277 4.04e-44 157
Msa1337140 AT4G12300.1 35.430 302 182 5 1 297 15 308 7.64e-44 156
Msa1337140 AT4G20240.1 34.231 260 154 6 25 279 29 276 7.91e-44 155
Msa1337140 AT3G26330.1 32.841 271 170 5 32 297 32 295 1.13e-43 155
Msa1337140 AT1G11610.1 30.797 276 178 5 25 297 27 292 2.93e-43 154
Msa1337140 AT1G11610.2 30.797 276 178 5 25 297 27 292 3.26e-43 154
Msa1337140 AT3G26190.1 34.884 258 152 7 31 280 28 277 6.69e-43 154
Msa1337140 AT3G53280.1 33.929 280 158 8 31 297 28 293 1.63e-42 152
Msa1337140 AT5G42590.1 29.431 299 201 7 1 297 3 293 2.38e-42 152
Msa1337140 AT3G26180.1 32.534 292 181 8 1 284 1 284 3.91e-42 152
Msa1337140 AT2G30770.1 32.143 252 159 4 31 279 33 275 9.28e-42 150
Msa1337140 AT3G26170.1 32.509 283 175 8 24 297 23 298 1.25e-41 150
Msa1337140 AT3G44250.1 31.641 256 162 4 31 280 28 276 2.05e-41 150
Msa1337140 AT4G37370.1 32.673 303 184 10 1 295 1 291 2.82e-41 149
Msa1337140 AT4G12320.1 31.746 315 192 4 1 297 1 310 2.86e-41 149
Msa1337140 AT3G26290.1 33.942 274 166 6 29 297 32 295 2.92e-41 149
Msa1337140 AT3G26290.2 33.942 274 166 6 29 297 45 308 3.68e-41 149
Msa1337140 AT3G26200.1 34.884 258 152 7 31 280 28 277 6.70e-41 148
Msa1337140 AT3G26320.1 31.734 271 173 5 32 297 32 295 8.40e-41 148
Msa1337140 AT1G13090.1 32.130 277 165 9 26 291 22 286 1.70e-40 143
Msa1337140 AT5G67310.1 32.526 289 172 6 4 283 20 294 5.79e-40 146
Msa1337140 AT5G24950.1 28.889 270 180 4 31 297 32 292 7.51e-40 145
Msa1337140 AT1G13110.1 30.945 307 195 9 1 297 1 300 8.55e-40 145
Msa1337140 AT5G10600.1 29.617 287 192 5 1 283 18 298 2.48e-39 144
Msa1337140 AT3G26280.1 33.725 255 153 7 31 277 32 278 5.39e-39 143
Msa1337140 AT3G26280.2 33.725 255 153 7 31 277 49 295 6.60e-39 143
Msa1337140 AT1G13090.2 32.130 277 165 9 26 291 22 286 7.38e-39 142
Msa1337140 AT4G31970.1 30.928 291 180 7 5 280 12 296 9.46e-39 143
Msa1337140 AT5G25130.1 32.308 260 160 5 4 259 6 253 1.49e-38 142
Msa1337140 AT4G37340.1 31.923 260 164 6 31 283 30 283 2.05e-38 142
Msa1337140 AT5G24960.2 29.787 282 186 4 19 297 21 293 2.69e-38 139
Msa1337140 AT4G31940.1 30.952 294 177 8 5 280 12 297 3.02e-38 141
Msa1337140 AT5G57260.1 31.250 272 174 6 32 297 31 295 3.43e-38 141
Msa1337140 AT2G30750.1 30.116 259 169 4 25 280 27 276 3.87e-38 140
Msa1337140 AT5G25120.1 32.014 278 173 6 5 278 6 271 5.35e-38 140
Msa1337140 AT5G10610.1 30.405 296 179 7 1 283 1 282 8.29e-38 140
Msa1337140 AT3G26160.1 32.609 276 170 8 31 297 30 298 1.32e-37 139
Msa1337140 AT2G23190.1 30.769 299 189 8 8 297 49 338 1.34e-37 140
Msa1337140 AT5G24960.1 29.787 282 186 4 19 297 21 293 1.58e-37 139
Msa1337140 AT4G37330.1 32.215 298 175 8 15 297 6 291 1.95e-37 139
Msa1337140 AT5G57220.1 32.203 295 189 6 5 297 4 289 2.34e-37 139
Msa1337140 AT2G40890.1 30.537 298 188 7 1 288 1 289 3.16e-37 138
Msa1337140 AT4G22690.1 34.082 267 157 7 40 297 93 349 7.88e-37 138
Msa1337140 AT4G13770.1 29.389 262 166 6 5 258 4 254 9.27e-37 137
Msa1337140 AT4G37320.1 31.228 285 181 7 4 283 9 283 1.54e-36 136
Msa1337140 AT4G12310.1 33.585 265 164 3 40 297 53 312 1.61e-36 137
Msa1337140 AT3G26210.1 31.579 266 166 8 40 297 40 297 2.17e-36 136
Msa1337140 AT4G22710.1 33.708 267 158 7 40 297 62 318 2.62e-36 136
Msa1337140 AT4G37360.1 31.379 290 185 7 1 283 1 283 4.23e-36 135
Msa1337140 AT4G31500.1 32.443 262 164 7 1 258 1 253 4.92e-36 135
Msa1337140 AT3G52970.1 30.717 293 185 8 4 286 10 294 5.96e-36 135
Msa1337140 AT3G26230.1 31.908 304 186 9 4 297 3 295 7.52e-36 134
Msa1337140 AT5G25140.1 30.216 278 178 5 5 278 6 271 9.00e-36 134
Msa1337140 AT3G25180.2 33.476 233 146 4 55 284 65 291 9.27e-36 133
Msa1337140 AT2G02580.1 31.636 275 168 5 32 297 32 295 1.24e-35 134
Msa1337140 AT5G25180.1 29.249 253 166 4 31 279 29 272 1.41e-35 134
Msa1337140 AT4G37430.1 30.822 292 183 7 15 297 13 294 2.14e-35 133
Msa1337140 AT3G26270.1 32.197 264 161 9 31 285 32 286 2.93e-35 133
Msa1337140 AT3G25180.1 33.476 233 146 4 55 284 65 291 3.21e-35 133
Msa1337140 AT2G24180.1 31.365 271 177 5 31 297 36 301 9.97e-35 132
Msa1337140 AT3G28740.1 33.091 275 169 7 29 297 37 302 1.78e-34 131
Msa1337140 AT5G44620.1 31.818 264 168 4 40 297 55 312 2.47e-34 130
Msa1337140 AT3G26220.1 31.317 281 168 8 31 297 29 298 5.81e-34 129
Msa1337140 AT5G06905.1 28.956 297 195 6 7 297 9 295 8.15e-34 129
Msa1337140 AT2G23220.1 30.769 273 174 7 31 297 46 309 8.26e-34 129
Msa1337140 AT4G12330.1 32.830 265 163 7 40 297 55 311 1.21e-33 129
Msa1337140 AT2G45550.1 29.603 277 176 6 31 297 38 305 1.26e-33 129
Msa1337140 AT3G52970.2 29.642 307 184 8 4 286 10 308 1.27e-33 129
Msa1337140 AT3G26830.1 28.716 296 191 8 4 291 3 286 1.52e-33 128
Msa1337140 AT3G61040.2 30.483 269 175 5 32 297 34 293 1.78e-33 126
Msa1337140 AT3G26150.1 28.758 306 199 9 1 297 3 298 2.90e-33 127
Msa1337140 AT3G61040.1 30.483 269 175 5 32 297 34 293 9.21e-33 126
Msa1337140 AT2G45560.2 28.758 306 191 10 4 294 9 302 1.26e-32 122
Msa1337140 AT4G37400.1 30.502 259 170 5 40 297 40 289 2.66e-32 125
Msa1337140 AT2G45560.1 29.126 309 192 10 4 297 9 305 3.39e-32 125
Msa1337140 AT3G53300.1 29.845 258 167 6 27 277 24 274 7.13e-31 121
Msa1337140 AT1G33720.1 28.155 309 197 9 3 297 8 305 2.44e-30 119
Msa1337140 AT4G37410.1 29.966 297 193 8 6 297 5 291 3.28e-30 119
Msa1337140 AT2G45560.3 30.000 240 152 7 4 235 9 240 4.40e-30 114
Msa1337140 AT3G20940.1 30.159 252 161 7 31 275 42 285 7.17e-30 118
Msa1337140 AT5G36220.1 29.801 302 193 9 6 297 8 300 7.77e-30 118
Msa1337140 AT4G31950.1 29.592 294 169 11 5 280 12 285 7.91e-30 118
Msa1337140 AT2G42250.1 27.451 306 204 5 2 297 7 304 1.24e-29 117
Msa1337140 AT2G45580.3 29.304 273 170 7 38 297 45 307 3.61e-29 115
Msa1337140 AT1G13710.1 28.173 323 177 11 5 297 15 312 6.13e-29 115
Msa1337140 AT2G45580.1 29.304 273 170 7 38 297 45 307 1.23e-28 115
Msa1337140 AT1G13100.1 28.676 272 166 10 40 297 37 294 2.47e-28 114
Msa1337140 AT2G45570.1 29.044 272 171 8 38 297 45 306 1.65e-27 112
Msa1337140 AT2G25160.2 30.063 316 188 12 4 296 3 308 2.69e-27 110
Msa1337140 AT3G20950.1 30.196 255 160 8 31 275 42 288 3.45e-27 110
Msa1337140 AT2G25160.1 30.063 316 188 12 4 296 3 308 6.92e-27 110
Msa1337140 AT5G05260.2 27.018 285 188 6 28 295 37 318 2.31e-26 108
Msa1337140 AT1G74110.1 29.123 285 172 10 30 297 62 333 4.41e-26 107
Msa1337140 AT5G09970.1 31.599 269 155 10 33 285 71 326 7.84e-26 107
Msa1337140 AT4G15360.1 27.174 276 188 6 28 297 37 305 3.93e-25 105
Msa1337140 AT3G20090.2 29.461 241 157 6 42 276 54 287 5.04e-25 104
Msa1337140 AT5G35917.1 26.829 287 188 6 28 295 39 322 8.57e-25 103
Msa1337140 AT4G20235.1 24.710 259 160 5 6 259 6 234 9.88e-25 102
Msa1337140 AT4G39950.1 26.923 286 193 6 8 280 33 315 1.03e-24 103
Msa1337140 AT4G39950.2 26.923 286 193 6 8 280 73 355 1.04e-24 104
Msa1337140 AT3G32047.1 27.953 254 172 5 47 297 59 304 1.94e-24 103
Msa1337140 AT3G20110.1 27.517 298 203 6 4 297 14 302 3.78e-24 102
Msa1337140 AT1G50520.1 26.592 267 177 8 40 297 52 308 8.99e-24 101
Msa1337140 AT1G66540.1 31.429 175 110 3 114 283 1 170 3.01e-23 98.6
Msa1337140 AT2G14100.1 28.879 232 154 5 50 277 63 287 4.19e-23 99.4
Msa1337140 AT2G22330.1 28.223 287 183 7 13 280 35 317 6.76e-23 99.0
Msa1337140 AT2G22330.2 28.223 287 183 7 13 280 58 340 8.80e-23 98.6
Msa1337140 AT3G61880.1 30.855 269 170 8 33 297 68 324 1.15e-22 98.2
Msa1337140 AT1G74540.1 27.083 288 181 7 4 280 5 274 1.25e-22 97.8
Msa1337140 AT3G61880.2 30.855 269 170 8 33 297 68 324 1.53e-22 97.8
Msa1337140 AT2G46660.1 28.996 269 171 7 33 297 72 324 1.71e-22 97.4
Msa1337140 AT3G20130.1 25.197 254 180 4 47 297 59 305 2.63e-22 97.1
Msa1337140 AT5G05260.1 27.083 240 157 5 28 250 37 275 2.90e-22 96.7
Msa1337140 AT3G20140.1 26.690 281 189 9 24 297 35 305 1.25e-21 95.1
Msa1337140 AT5G35715.1 29.680 219 140 6 66 277 1 212 2.57e-21 93.6
Msa1337140 AT3G20100.1 25.498 251 174 5 52 297 63 305 3.73e-21 93.6
Msa1337140 AT3G20960.2 27.679 224 150 5 58 276 69 285 5.16e-21 93.2
Msa1337140 AT1G58260.1 23.208 293 208 7 2 279 8 298 5.64e-21 93.2
Msa1337140 AT1G74550.1 25.743 303 196 9 1 297 1 280 7.93e-21 92.4
Msa1337140 AT3G53290.1 28.155 206 136 6 81 280 8 207 1.95e-20 90.9
Msa1337140 AT2G05180.1 32.468 154 101 2 47 198 58 210 6.84e-20 89.7
Msa1337140 AT1G01190.1 26.667 270 179 7 31 297 73 326 8.91e-20 89.7
Msa1337140 AT1G01190.2 26.667 270 179 7 31 297 78 331 1.09e-19 89.4
Msa1337140 AT5G42580.1 27.200 250 160 7 51 297 60 290 2.86e-19 88.2
Msa1337140 AT1G50560.1 26.692 266 175 9 42 297 54 309 4.53e-19 87.4
Msa1337140 AT4G15350.1 25.352 213 149 3 47 256 52 257 6.85e-19 87.0
Msa1337140 AT4G15330.1 24.415 299 211 7 5 297 12 301 1.63e-18 85.9
Msa1337140 AT1G79370.1 24.901 253 177 5 4 243 12 264 3.53e-18 85.1
Msa1337140 AT2G30490.1 32.759 232 140 5 4 229 10 231 3.98e-18 84.7
Msa1337140 AT3G10560.1 27.946 297 188 8 7 286 18 305 4.09e-18 84.7
Msa1337140 AT5G47990.1 26.522 230 157 5 52 276 64 286 4.46e-18 84.7
Msa1337140 AT3G20120.4 28.761 226 150 5 47 269 58 275 5.47e-18 84.3
Msa1337140 AT3G26180.2 37.719 114 70 1 1 114 1 113 2.76e-17 81.6
Msa1337140 AT3G20080.2 25.097 259 167 9 31 276 42 286 7.83e-17 80.9
Msa1337140 AT3G20080.1 25.097 259 167 9 31 276 42 286 7.83e-17 80.9
Msa1337140 AT5G04630.1 24.752 303 196 10 4 286 10 300 1.32e-16 80.1
Msa1337140 AT3G53305.1 28.655 171 111 4 66 232 1 164 1.78e-16 79.0
Msa1337140 AT2G27000.1 24.464 233 160 7 52 277 61 284 2.06e-16 79.7
Msa1337140 AT1G28430.1 24.000 250 178 6 52 297 62 303 3.54e-15 75.9
Msa1337140 AT1G16410.2 23.588 301 199 9 4 280 15 308 2.89e-14 73.2
Msa1337140 AT1G16410.1 23.588 301 199 9 4 280 15 308 4.45e-14 72.8
Msa1337140 AT4G15380.1 22.892 249 166 6 58 297 70 301 4.67e-14 72.8
Msa1337140 AT4G20235.2 31.683 101 60 2 160 259 8 100 1.14e-11 62.0
Msa1337140 AT1G13080.2 29.947 187 107 9 120 297 9 180 1.76e-11 64.7

Find 88 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGCTGAACAATTCTTAA+AGG 0.157447 tig0001464:+13865 Msa1337140:CDS
GATCTTGTGTTTGCTCCTTA+TGG 0.178418 tig0001464:+13956 Msa1337140:CDS
ATAATTATATGCTAAGTATT+TGG 0.185275 tig0001464:-13930 None:intergenic
GTAAGGAAGGTTTGGTTATT+AGG 0.204727 tig0001464:-13685 None:intergenic
GCATGAGAGGACCGTGTTTA+AGG 0.205429 tig0001464:-13796 None:intergenic
GTCTATGGTGGTTGAACTTA+TGG 0.231355 tig0001464:+16730 Msa1337140:CDS
GCTAGGGCATGGTGTGGTAC+TGG 0.237218 tig0001464:-13764 None:intergenic
TCCTCTCATGCATCTTCGTC+TGG 0.245683 tig0001464:+13808 Msa1337140:CDS
CATGTTCTCTTCTAAGGCTT+TGG 0.257986 tig0001464:+14018 Msa1337140:CDS
CGTTCACATGTTCTCTTCTA+AGG 0.268534 tig0001464:+14012 Msa1337140:CDS
ATCCGCAATTTGGCAAGTTC+AGG 0.270057 tig0001464:+16572 Msa1337140:CDS
AGTTGGCCGGCTAGAGAAAT+TGG 0.307481 tig0001464:-13897 None:intergenic
AGCAAGATTGATCCGCAATT+TGG 0.328291 tig0001464:+16562 Msa1337140:CDS
CTAGGGCATGGTGTGGTACT+GGG 0.342383 tig0001464:-13763 None:intergenic
GGCTGATGAGTTTAAGTCTA+TGG 0.347563 tig0001464:+16715 Msa1337140:CDS
ACACCATGCCCTAGCAGCTT+TGG 0.378995 tig0001464:+13772 Msa1337140:CDS
TTGTCCTAAGTTTACTGCTT+TGG 0.379596 tig0001464:-16615 None:intergenic
CATGAGAGGACCGTGTTTAA+GGG 0.384236 tig0001464:-13795 None:intergenic
TATTCCTGCTTTGGAGTGGT+TGG 0.401584 tig0001464:+16784 Msa1337140:CDS
TTGGAGTGGTTGGATCTTCA+AGG 0.407676 tig0001464:+16794 Msa1337140:CDS
GGTGGTTGAACTTATGGTAT+TGG 0.414266 tig0001464:+16736 Msa1337140:CDS
GACCACGGTGGCGTTTGTTA+AGG 0.422118 tig0001464:+13978 Msa1337140:CDS
GGCCATGGGGTTGGCCCAGG+TGG 0.424105 tig0001464:-13713 None:intergenic
TGGAAGAGGTAAGGAAGGTT+TGG 0.429561 tig0001464:-13693 None:intergenic
GGTTTCCGACGATGGGCCAT+GGG 0.437134 tig0001464:-13727 None:intergenic
ATGGGCCATGGGGTTGGCCC+AGG 0.442454 tig0001464:-13716 None:intergenic
CCGACGATGGGCCATGGGGT+TGG 0.443966 tig0001464:-13722 None:intergenic
TTGAGTTTGTCTTCATCCTC+AGG 0.453440 tig0001464:-16971 None:intergenic
CCTTCCTTACCTCTTCCACC+TGG 0.455614 tig0001464:+13698 Msa1337140:CDS
TTCCACCTGGGCCAACCCCA+TGG 0.459059 tig0001464:+13711 Msa1337140:CDS
GGGGTTGGCCCAGGTGGAAG+AGG 0.463492 tig0001464:-13707 None:intergenic
AGGTTTCCGACGATGGGCCA+TGG 0.472116 tig0001464:-13728 None:intergenic
AAACGCCACCGTGGTCCATA+AGG 0.473854 tig0001464:-13971 None:intergenic
CAAGCATTATTGAGGACCAT+AGG 0.489491 tig0001464:+16867 Msa1337140:CDS
TCCGCAATTTGGCAAGTTCA+GGG 0.493428 tig0001464:+16573 Msa1337140:CDS
TATTTGGCGCCGGAGTTAGT+TGG 0.496761 tig0001464:-13914 None:intergenic
CCTCTCATGCATCTTCGTCT+GGG 0.502180 tig0001464:+13809 Msa1337140:CDS
TCTCACTCTTAGAAATCCTA+TGG 0.508836 tig0001464:-16901 None:intergenic
GCATTGGCTAGGGTAATGAT+AGG 0.515157 tig0001464:+16644 Msa1337140:CDS
GTTGAACTTATGGTATTGGC+TGG 0.515922 tig0001464:+16740 Msa1337140:CDS
GGGTCCAAAGCAGTAAACTT+AGG 0.519700 tig0001464:+16593 Msa1337140:CDS
GTGGGTGTGAATGTGATCCT+AGG 0.521548 tig0001464:+16693 Msa1337140:CDS
GTTTAAGGGCCAAAGCTGCT+AGG 0.521744 tig0001464:-13781 None:intergenic
CGTCGGAAACCTACCTCACA+TGG 0.522920 tig0001464:+13739 Msa1337140:CDS
GCACGACAAACGCATTGGCT+AGG 0.524143 tig0001464:+16633 Msa1337140:CDS
GTGAGGTAGGTTTCCGACGA+TGG 0.524817 tig0001464:-13735 None:intergenic
ATGATACCAATTTCTCTAGC+CGG 0.525685 tig0001464:+13891 Msa1337140:CDS
CACGACAAACGCATTGGCTA+GGG 0.530927 tig0001464:+16634 Msa1337140:CDS
GTATTTAATGAGGGGAATGG+TGG 0.545526 tig0001464:+16674 Msa1337140:CDS
TGGCCCAGGTGGAAGAGGTA+AGG 0.545926 tig0001464:-13702 None:intergenic
TATTTAATGAGGGGAATGGT+GGG 0.550909 tig0001464:+16675 Msa1337140:CDS
TTTAAGGGCCAAAGCTGCTA+GGG 0.551811 tig0001464:-13780 None:intergenic
TGAGGTAGGTTTCCGACGAT+GGG 0.552187 tig0001464:-13734 None:intergenic
GTAGCAAAGACAATAATCAA+TGG 0.552362 tig0001464:-13626 None:intergenic
ACCCTGAACTTGCCAAATTG+CGG 0.560971 tig0001464:-16592 None:intergenic
CTTTAAGAATTGTTCAGCAA+CGG 0.561532 tig0001464:-13864 None:intergenic
AGATCCAACCACTCCAAAGC+AGG 0.563334 tig0001464:-16806 None:intergenic
CGAGTATTTAATGAGGGGAA+TGG 0.565068 tig0001464:+16671 Msa1337140:CDS
GGGCCAAAGCTGCTAGGGCA+TGG 0.575589 tig0001464:-13775 None:intergenic
ATATGCTAAGTATTTGGCGC+CGG 0.577802 tig0001464:-13924 None:intergenic
GAATTGTTCAGCAACGGAGG+CGG 0.580415 tig0001464:-13858 None:intergenic
TGTATGCACGACAAACGCAT+TGG 0.583192 tig0001464:+16628 Msa1337140:CDS
TCTAGCCGGCCAACTAACTC+CGG 0.588400 tig0001464:+13905 Msa1337140:CDS
CTTCCTTACCTCTTCCACCT+GGG 0.591049 tig0001464:+13699 Msa1337140:CDS
TGGTTATTAGGTTTAAGAGA+CGG 0.593959 tig0001464:-13673 None:intergenic
GTACTGGGCCCATGTGAGGT+AGG 0.599762 tig0001464:-13748 None:intergenic
TGGGTGTGAATGTGATCCTA+GGG 0.600698 tig0001464:+16694 Msa1337140:CDS
GACTTAAACTCATCAGCCCT+AGG 0.602382 tig0001464:-16728 None:intergenic
TTGGATCTTCAAGGTGTGCA+AGG 0.605036 tig0001464:+16803 Msa1337140:CDS
TGTTTGCTCCTTATGGACCA+CGG 0.606718 tig0001464:+13963 Msa1337140:CDS
CCAACCCCATGGCCCATCGT+CGG 0.613150 tig0001464:+13722 Msa1337140:CDS
AGGACGGCGAGTATTTAATG+AGG 0.616616 tig0001464:+16664 Msa1337140:CDS
TGATGAGTTTAAGTCTATGG+TGG 0.617052 tig0001464:+16718 Msa1337140:CDS
CCCAGACGAAGATGCATGAG+AGG 0.622658 tig0001464:-13809 None:intergenic
TGAATTTAGACACATACGCC+AGG 0.625469 tig0001464:+14042 Msa1337140:CDS
GCAGCTTTGGCCCTTAAACA+CGG 0.625799 tig0001464:+13785 Msa1337140:CDS
CCAGGTGGAAGAGGTAAGGA+AGG 0.626306 tig0001464:-13698 None:intergenic
TAAGAATTGTTCAGCAACGG+AGG 0.626383 tig0001464:-13861 None:intergenic
TGTGGTACTGGGCCCATGTG+AGG 0.628351 tig0001464:-13752 None:intergenic
GGACGGCGAGTATTTAATGA+GGG 0.633048 tig0001464:+16665 Msa1337140:CDS
TGGCTAGGGTAATGATAGGA+CGG 0.652434 tig0001464:+16648 Msa1337140:CDS
TGGCGCCGGAGTTAGTTGGC+CGG 0.658358 tig0001464:-13910 None:intergenic
AAAGCTGCTAGGGCATGGTG+TGG 0.671786 tig0001464:-13770 None:intergenic
GTTTCCGACGATGGGCCATG+GGG 0.678188 tig0001464:-13726 None:intergenic
GACGGCGAGTATTTAATGAG+GGG 0.689984 tig0001464:+16666 Msa1337140:CDS
GTCGGAAACCTACCTCACAT+GGG 0.707352 tig0001464:+13740 Msa1337140:CDS
TTCCTTAACAAACGCCACCG+TGG 0.720374 tig0001464:-13980 None:intergenic
TTGCTCCTTATGGACCACGG+TGG 0.772444 tig0001464:+13966 Msa1337140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATCTAAAAATTGTTTT+GGG - tig0001464:14375-14394 None:intergenic 10.0%
!! AATTGTATTTGTAAAAAAAT+TGG + tig0001464:14552-14571 Msa1337140:intron 10.0%
!! AATATAGAGATAATAAAATA+AGG + tig0001464:14625-14644 Msa1337140:intron 10.0%
!! ATATAGAGATAATAAAATAA+GGG + tig0001464:14626-14645 Msa1337140:intron 10.0%
!! TATAGACTTATATTTATATA+CGG - tig0001464:15047-15066 None:intergenic 10.0%
!!! ATATTCATTTTTACTATAAA+TGG - tig0001464:15808-15827 None:intergenic 10.0%
!!! CATTTTTACTTTTTTTTTTA+GGG - tig0001464:15833-15852 None:intergenic 10.0%
!!! TCATTTTTACTTTTTTTTTT+AGG - tig0001464:15834-15853 None:intergenic 10.0%
!! AATATTATAACAACAAAAAA+TGG + tig0001464:15853-15872 Msa1337140:intron 10.0%
!!! AAAATTGTTTTTTTTTTGTT+TGG + tig0001464:16302-16321 Msa1337140:intron 10.0%
!! ATAATTATATGCTAAGTATT+TGG - tig0001464:13933-13952 None:intergenic 15.0%
!! TGTAAAACATTTGTAAAAAA+TGG - tig0001464:14280-14299 None:intergenic 15.0%
!!! ATAGTATCAAATTGTTTTAT+AGG + tig0001464:14342-14361 Msa1337140:intron 15.0%
!!! GAAAAATCTAAAAATTGTTT+TGG - tig0001464:14376-14395 None:intergenic 15.0%
!!! AAATACATTTTTTTATACGT+AGG + tig0001464:14522-14541 Msa1337140:intron 15.0%
!!! ACATTTTCCTTAAAATAATT+CGG + tig0001464:14789-14808 Msa1337140:intron 15.0%
!!! TGTAATTTTTTTGCTTATAA+TGG - tig0001464:16162-16181 None:intergenic 15.0%
!! TTACAAAATTAAGTAGAAGT+TGG + tig0001464:14295-14314 Msa1337140:intron 20.0%
!! TTAACAAACAAGAATTTGAA+GGG - tig0001464:14400-14419 None:intergenic 20.0%
!! ATTAACAAACAAGAATTTGA+AGG - tig0001464:14401-14420 None:intergenic 20.0%
!!! TCATAAACCGAATTATTTTA+AGG - tig0001464:14799-14818 None:intergenic 20.0%
!! AGGCCTAAATTAAAAATTAA+AGG + tig0001464:14951-14970 Msa1337140:intron 20.0%
!! GGCCTAAATTAAAAATTAAA+GGG + tig0001464:14952-14971 Msa1337140:intron 20.0%
!! GCCTAAATTAAAAATTAAAG+GGG + tig0001464:14953-14972 Msa1337140:intron 20.0%
!!! ACCCCTTTAATTTTTAATTT+AGG - tig0001464:14957-14976 None:intergenic 20.0%
!! TGAATGCATTTATATACAAA+TGG + tig0001464:15156-15175 Msa1337140:intron 20.0%
!! TTCTTGTAAAAAGAAACTAA+TGG + tig0001464:15263-15282 Msa1337140:intron 20.0%
!!! CTCAATTTCTCTAAAAAAAA+TGG - tig0001464:15374-15393 None:intergenic 20.0%
!!! TAATGCAACTCTTTTTTTTA+AGG + tig0001464:15466-15485 Msa1337140:intron 20.0%
!! AATTCGACATTTCAAAAATA+CGG + tig0001464:15545-15564 Msa1337140:intron 20.0%
!! ATCATAAACAGTTGTAAAAT+GGG - tig0001464:15582-15601 None:intergenic 20.0%
!! TATCATAAACAGTTGTAAAA+TGG - tig0001464:15583-15602 None:intergenic 20.0%
!!! ATTTTGTAACGGAAAATTTA+GGG - tig0001464:16125-16144 None:intergenic 20.0%
!!! TATTTTGTAACGGAAAATTT+AGG - tig0001464:16126-16145 None:intergenic 20.0%
!!! GTTTTTTTTTTGTTTGGTTT+AGG + tig0001464:16308-16327 Msa1337140:intron 20.0%
!! AGATGAAAAAATTACACAAA+AGG + tig0001464:16828-16847 Msa1337140:CDS 20.0%
!!! ATTTTTAACAAGCATTATTG+AGG + tig0001464:16859-16878 Msa1337140:CDS 20.0%
!!! ATTTTTACAATCTAAGATCC+CGG - tig0001464:14506-14525 None:intergenic 25.0%
! AATTGCTTATTACCAATTCT+AGG + tig0001464:14863-14882 Msa1337140:intron 25.0%
! TTTAAAAAGGACATAAAGAG+AGG + tig0001464:14903-14922 Msa1337140:intron 25.0%
! TGCAAATTGTCCTATAATTA+GGG - tig0001464:15011-15030 None:intergenic 25.0%
! TTGCAAATTGTCCTATAATT+AGG - tig0001464:15012-15031 None:intergenic 25.0%
! ACTCTTGAACAAATTCAATT+TGG + tig0001464:15653-15672 Msa1337140:intron 25.0%
!!! TTTCAAACAACTGTTTTTAC+TGG - tig0001464:15684-15703 None:intergenic 25.0%
! TGTTCCAACTAAAATTCTAA+CGG - tig0001464:16014-16033 None:intergenic 25.0%
!! AGGGTCGATAATTTAAAATT+CGG - tig0001464:16051-16070 None:intergenic 25.0%
! CATCTAATTCTATGAGAAAA+GGG - tig0001464:16070-16089 None:intergenic 25.0%
! ACATCTAATTCTATGAGAAA+AGG - tig0001464:16071-16090 None:intergenic 25.0%
! GAATTAGATGTGTTTAATTG+AGG + tig0001464:16080-16099 Msa1337140:intron 25.0%
!! TTTTTGCTTATAATGGTGAT+CGG - tig0001464:16155-16174 None:intergenic 25.0%
! CATTCATTAAATGATGTATG+TGG - tig0001464:16191-16210 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + tig0001464:16265-16284 Msa1337140:intron 25.0%
!!! ATTTTATTTTATACACCCTC+CGG - tig0001464:16287-16306 None:intergenic 25.0%
!! GCGATAAAATATAGACTTTT+TGG + tig0001464:16350-16369 Msa1337140:intron 25.0%
GTAGCAAAGACAATAATCAA+TGG - tig0001464:13629-13648 None:intergenic 30.0%
TGGTTATTAGGTTTAAGAGA+CGG - tig0001464:13676-13695 None:intergenic 30.0%
! CTTTAAGAATTGTTCAGCAA+CGG - tig0001464:13867-13886 None:intergenic 30.0%
CATAACTACATGAAAACGAA+AGG - tig0001464:14087-14106 None:intergenic 30.0%
! AACAATGTATTTTCATGCCA+TGG + tig0001464:14128-14147 Msa1337140:intron 30.0%
TCCTTAAACAGCAAAAATAG+CGG + tig0001464:14202-14221 Msa1337140:intron 30.0%
!! TGTTTTCTTATTTAGTGTCC+CGG + tig0001464:14754-14773 Msa1337140:intron 30.0%
TATGAAGTCTTCCATTTGAA+AGG + tig0001464:14814-14833 Msa1337140:intron 30.0%
TGTGACAATAATCCTAGAAT+TGG - tig0001464:14878-14897 None:intergenic 30.0%
TTGTCACAGTGAGTTTAAAA+AGG + tig0001464:14890-14909 Msa1337140:intron 30.0%
CTCTATATATATGTTTGGTC+GGG - tig0001464:14933-14952 None:intergenic 30.0%
CCTCTATATATATGTTTGGT+CGG - tig0001464:14934-14953 None:intergenic 30.0%
TAGGCCTCTATATATATGTT+TGG - tig0001464:14938-14957 None:intergenic 30.0%
AGTAATGAATCATGTTGTCA+AGG + tig0001464:15603-15622 Msa1337140:intron 30.0%
TGAAAGTTGAGTAATACTTC+AGG + tig0001464:15732-15751 Msa1337140:intron 30.0%
GAAAGTTGAGTAATACTTCA+GGG + tig0001464:15733-15752 Msa1337140:intron 30.0%
!! ACTACCGTTAGAATTTTAGT+TGG + tig0001464:16007-16026 Msa1337140:intron 30.0%
CAAAAATGCACATATAATGC+AGG + tig0001464:16532-16551 Msa1337140:intron 30.0%
! GTAAGGAAGGTTTGGTTATT+AGG - tig0001464:13688-13707 None:intergenic 35.0%
CGTTGCTGAACAATTCTTAA+AGG + tig0001464:13865-13884 Msa1337140:CDS 35.0%
ATGATACCAATTTCTCTAGC+CGG + tig0001464:13891-13910 Msa1337140:CDS 35.0%
AACGAAAAATGATCCTTACC+TGG - tig0001464:14063-14082 None:intergenic 35.0%
TGTCAAAAAATAGTAGGCAG+GGG - tig0001464:14169-14188 None:intergenic 35.0%
CTGTCAAAAAATAGTAGGCA+GGG - tig0001464:14170-14189 None:intergenic 35.0%
AGGACCTGTCAAAAAATAGT+AGG - tig0001464:14175-14194 None:intergenic 35.0%
!!! TTTTGCTGTTTAAGGAGAGT+AGG - tig0001464:14198-14217 None:intergenic 35.0%
!!! TCCGCTATTTTTGCTGTTTA+AGG - tig0001464:14206-14225 None:intergenic 35.0%
CTCGAAAAAACTTCAACAAC+CGG + tig0001464:14484-14503 Msa1337140:intron 35.0%
TCGAAAAAACTTCAACAACC+GGG + tig0001464:14485-14504 Msa1337140:intron 35.0%
AAAATGTTAACTAGTGTCGC+CGG - tig0001464:14776-14795 None:intergenic 35.0%
ATGTTGAGCTACCTTTCAAA+TGG - tig0001464:14828-14847 None:intergenic 35.0%
CCGACCAAACATATATATAG+AGG + tig0001464:14931-14950 Msa1337140:intron 35.0%
!!! CTTCATACTGTTGTTTTCAG+AGG - tig0001464:15774-15793 None:intergenic 35.0%
! CTCTGAAAACAACAGTATGA+AGG + tig0001464:15772-15791 Msa1337140:intron 35.0%
! ATGGGGGATCATATTACTTT+TGG - tig0001464:15911-15930 None:intergenic 35.0%
AAAGTAATATGATCCCCCAT+TGG + tig0001464:15911-15930 Msa1337140:intron 35.0%
TTGTCCTAAGTTTACTGCTT+TGG - tig0001464:16600-16619 None:intergenic 35.0%
TATTTAATGAGGGGAATGGT+GGG + tig0001464:16675-16694 Msa1337140:CDS 35.0%
TGATGAGTTTAAGTCTATGG+TGG + tig0001464:16718-16737 Msa1337140:CDS 35.0%
! TTGGCTGGTGTTTTCAATAT+TGG + tig0001464:16755-16774 Msa1337140:CDS 35.0%
! TGGTGATTTTATTCCTGCTT+TGG + tig0001464:16775-16794 Msa1337140:CDS 35.0%
!!! ATTTTATTCCTGCTTTGGAG+TGG + tig0001464:16780-16799 Msa1337140:CDS 35.0%
TCTCACTCTTAGAAATCCTA+TGG - tig0001464:16886-16905 None:intergenic 35.0%
ACTCAAAGAAAAACTTCCTG+AGG + tig0001464:16937-16956 Msa1337140:CDS 35.0%
TAAGAATTGTTCAGCAACGG+AGG - tig0001464:13864-13883 None:intergenic 40.0%
ATATGCTAAGTATTTGGCGC+CGG - tig0001464:13927-13946 None:intergenic 40.0%
GATCTTGTGTTTGCTCCTTA+TGG + tig0001464:13956-13975 Msa1337140:CDS 40.0%
CGTTCACATGTTCTCTTCTA+AGG + tig0001464:14012-14031 Msa1337140:CDS 40.0%
!! CATGTTCTCTTCTAAGGCTT+TGG + tig0001464:14018-14037 Msa1337140:CDS 40.0%
TGAATTTAGACACATACGCC+AGG + tig0001464:14042-14061 Msa1337140:CDS 40.0%
CCTGTCAAAAAATAGTAGGC+AGG - tig0001464:14171-14190 None:intergenic 40.0%
!!! CCTGCCTACTATTTTTTGAC+AGG + tig0001464:14168-14187 Msa1337140:intron 40.0%
AAATGTTAACTAGTGTCGCC+GGG - tig0001464:14775-14794 None:intergenic 40.0%
GTCCTATAATTAGGGACGAA+GGG - tig0001464:15003-15022 None:intergenic 40.0%
TGTCCTATAATTAGGGACGA+AGG - tig0001464:15004-15023 None:intergenic 40.0%
! TTGTTTTCAGAGGTCCATGT+TGG - tig0001464:15764-15783 None:intergenic 40.0%
AAGATGCACTTGTTCCAATG+GGG - tig0001464:15928-15947 None:intergenic 40.0%
GAAGATGCACTTGTTCCAAT+GGG - tig0001464:15929-15948 None:intergenic 40.0%
ATTGGAACAAGTGCATCTTC+CGG + tig0001464:15929-15948 Msa1337140:intron 40.0%
GAATGAAGTAAGTATTCCGC+CGG - tig0001464:15951-15970 None:intergenic 40.0%
! GAAAATTTAGGGTGAGTGTG+AGG - tig0001464:16114-16133 None:intergenic 40.0%
!! TCGGAGGGTGTATTTTGTAA+CGG - tig0001464:16136-16155 None:intergenic 40.0%
TGCTTATAATGGTGATCGGA+GGG - tig0001464:16151-16170 None:intergenic 40.0%
TTGCTTATAATGGTGATCGG+AGG - tig0001464:16152-16171 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + tig0001464:16268-16287 Msa1337140:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + tig0001464:16269-16288 Msa1337140:intron 40.0%
TGCACATATAATGCAGGAAG+AGG + tig0001464:16538-16557 Msa1337140:intron 40.0%
AGCAAGATTGATCCGCAATT+TGG + tig0001464:16562-16581 Msa1337140:CDS 40.0%
CGAGTATTTAATGAGGGGAA+TGG + tig0001464:16671-16690 Msa1337140:CDS 40.0%
GTATTTAATGAGGGGAATGG+TGG + tig0001464:16674-16693 Msa1337140:CDS 40.0%
GGCTGATGAGTTTAAGTCTA+TGG + tig0001464:16715-16734 Msa1337140:CDS 40.0%
GTCTATGGTGGTTGAACTTA+TGG + tig0001464:16730-16749 Msa1337140:CDS 40.0%
GGTGGTTGAACTTATGGTAT+TGG + tig0001464:16736-16755 Msa1337140:CDS 40.0%
!! GTTGAACTTATGGTATTGGC+TGG + tig0001464:16740-16759 Msa1337140:CDS 40.0%
CAAGCATTATTGAGGACCAT+AGG + tig0001464:16867-16886 Msa1337140:CDS 40.0%
TTGAGTTTGTCTTCATCCTC+AGG - tig0001464:16956-16975 None:intergenic 40.0%
TGGAAGAGGTAAGGAAGGTT+TGG - tig0001464:13696-13715 None:intergenic 45.0%
TTTAAGGGCCAAAGCTGCTA+GGG - tig0001464:13783-13802 None:intergenic 45.0%
CATGAGAGGACCGTGTTTAA+GGG - tig0001464:13798-13817 None:intergenic 45.0%
TGTTTGCTCCTTATGGACCA+CGG + tig0001464:13963-13982 Msa1337140:CDS 45.0%
TTAGACACATACGCCAGGTA+AGG + tig0001464:14047-14066 Msa1337140:intron 45.0%
AATAGTAGGCAGGGGTAAAG+TGG - tig0001464:14161-14180 None:intergenic 45.0%
! TGCTGTTTAAGGAGAGTAGG+AGG - tig0001464:14195-14214 None:intergenic 45.0%
CTTCACGTACAAAAGTGGAG+GGG - tig0001464:14243-14262 None:intergenic 45.0%
CCTTCACGTACAAAAGTGGA+GGG - tig0001464:14244-14263 None:intergenic 45.0%
!! CCTCCACTTTTGTACGTGAA+GGG + tig0001464:14242-14261 Msa1337140:intron 45.0%
TAGCCCTTCACGTACAAAAG+TGG - tig0001464:14248-14267 None:intergenic 45.0%
TTGTACGTGAAGGGCTAGAA+TGG + tig0001464:14251-14270 Msa1337140:intron 45.0%
TGTACGTGAAGGGCTAGAAT+GGG + tig0001464:14252-14271 Msa1337140:intron 45.0%
GCCTCAGAAACACTAGTTAG+CGG - tig0001464:14654-14673 None:intergenic 45.0%
!! AACTAGTGTTTCTGAGGCAC+TGG + tig0001464:14656-14675 Msa1337140:intron 45.0%
CTCCCTTCGTCCCTAATTAT+AGG + tig0001464:14998-15017 Msa1337140:intron 45.0%
! ACTTCAGGGTGTTTCCAACA+TGG + tig0001464:15747-15766 Msa1337140:intron 45.0%
AGATGCACTTGTTCCAATGG+GGG - tig0001464:15927-15946 None:intergenic 45.0%
GGAAGATGCACTTGTTCCAA+TGG - tig0001464:15930-15949 None:intergenic 45.0%
AGTTGGAACAAGTGCAGCTT+TGG + tig0001464:16024-16043 Msa1337140:intron 45.0%
ATCCGCAATTTGGCAAGTTC+AGG + tig0001464:16572-16591 Msa1337140:CDS 45.0%
TCCGCAATTTGGCAAGTTCA+GGG + tig0001464:16573-16592 Msa1337140:CDS 45.0%
ACCCTGAACTTGCCAAATTG+CGG - tig0001464:16577-16596 None:intergenic 45.0%
GGGTCCAAAGCAGTAAACTT+AGG + tig0001464:16593-16612 Msa1337140:CDS 45.0%
TGTATGCACGACAAACGCAT+TGG + tig0001464:16628-16647 Msa1337140:CDS 45.0%
!! GCATTGGCTAGGGTAATGAT+AGG + tig0001464:16644-16663 Msa1337140:CDS 45.0%
TGGCTAGGGTAATGATAGGA+CGG + tig0001464:16648-16667 Msa1337140:CDS 45.0%
AGGACGGCGAGTATTTAATG+AGG + tig0001464:16664-16683 Msa1337140:CDS 45.0%
GGACGGCGAGTATTTAATGA+GGG + tig0001464:16665-16684 Msa1337140:CDS 45.0%
GACGGCGAGTATTTAATGAG+GGG + tig0001464:16666-16685 Msa1337140:CDS 45.0%
TGGGTGTGAATGTGATCCTA+GGG + tig0001464:16694-16713 Msa1337140:CDS 45.0%
GACTTAAACTCATCAGCCCT+AGG - tig0001464:16713-16732 None:intergenic 45.0%
!! TATTCCTGCTTTGGAGTGGT+TGG + tig0001464:16784-16803 Msa1337140:CDS 45.0%
TTGGAGTGGTTGGATCTTCA+AGG + tig0001464:16794-16813 Msa1337140:CDS 45.0%
TTGGATCTTCAAGGTGTGCA+AGG + tig0001464:16803-16822 Msa1337140:CDS 45.0%
CTTCCTTACCTCTTCCACCT+GGG + tig0001464:13699-13718 Msa1337140:CDS 50.0%
TGAGGTAGGTTTCCGACGAT+GGG - tig0001464:13737-13756 None:intergenic 50.0%
GTCGGAAACCTACCTCACAT+GGG + tig0001464:13740-13759 Msa1337140:CDS 50.0%
GTTTAAGGGCCAAAGCTGCT+AGG - tig0001464:13784-13803 None:intergenic 50.0%
! GCAGCTTTGGCCCTTAAACA+CGG + tig0001464:13785-13804 Msa1337140:CDS 50.0%
GCATGAGAGGACCGTGTTTA+AGG - tig0001464:13799-13818 None:intergenic 50.0%
TCCTCTCATGCATCTTCGTC+TGG + tig0001464:13808-13827 Msa1337140:CDS 50.0%
CCTCTCATGCATCTTCGTCT+GGG + tig0001464:13809-13828 Msa1337140:CDS 50.0%
GAATTGTTCAGCAACGGAGG+CGG - tig0001464:13861-13880 None:intergenic 50.0%
AGTTGGCCGGCTAGAGAAAT+TGG - tig0001464:13900-13919 None:intergenic 50.0%
! TATTTGGCGCCGGAGTTAGT+TGG - tig0001464:13917-13936 None:intergenic 50.0%
TTCCTTAACAAACGCCACCG+TGG - tig0001464:13983-14002 None:intergenic 50.0%
! GGTAAAGTGGTAGGGTACCA+TGG - tig0001464:14148-14167 None:intergenic 50.0%
TAGGCAGGGGTAAAGTGGTA+GGG - tig0001464:14156-14175 None:intergenic 50.0%
!! CCCTCCACTTTTGTACGTGA+AGG + tig0001464:14241-14260 Msa1337140:intron 50.0%
CCCTTCACGTACAAAAGTGG+AGG - tig0001464:14245-14264 None:intergenic 50.0%
GTACGTGAAGGGCTAGAATG+GGG + tig0001464:14253-14272 Msa1337140:intron 50.0%
! GCCGCTAACTAGTGTTTCTG+AGG + tig0001464:14650-14669 Msa1337140:intron 50.0%
!! CACGACAAACGCATTGGCTA+GGG + tig0001464:16634-16653 Msa1337140:CDS 50.0%
GTGGGTGTGAATGTGATCCT+AGG + tig0001464:16693-16712 Msa1337140:CDS 50.0%
AGATCCAACCACTCCAAAGC+AGG - tig0001464:16791-16810 None:intergenic 50.0%
CCAGGTGGAAGAGGTAAGGA+AGG - tig0001464:13701-13720 None:intergenic 55.0%
CCTTCCTTACCTCTTCCACC+TGG + tig0001464:13698-13717 Msa1337140:CDS 55.0%
GTGAGGTAGGTTTCCGACGA+TGG - tig0001464:13738-13757 None:intergenic 55.0%
CGTCGGAAACCTACCTCACA+TGG + tig0001464:13739-13758 Msa1337140:CDS 55.0%
CTAGGGCATGGTGTGGTACT+GGG - tig0001464:13766-13785 None:intergenic 55.0%
AAAGCTGCTAGGGCATGGTG+TGG - tig0001464:13773-13792 None:intergenic 55.0%
ACACCATGCCCTAGCAGCTT+TGG + tig0001464:13772-13791 Msa1337140:CDS 55.0%
CCCAGACGAAGATGCATGAG+AGG - tig0001464:13812-13831 None:intergenic 55.0%
TCTAGCCGGCCAACTAACTC+CGG + tig0001464:13905-13924 Msa1337140:CDS 55.0%
TTGCTCCTTATGGACCACGG+TGG + tig0001464:13966-13985 Msa1337140:CDS 55.0%
AAACGCCACCGTGGTCCATA+AGG - tig0001464:13974-13993 None:intergenic 55.0%
! GACCACGGTGGCGTTTGTTA+AGG + tig0001464:13978-13997 Msa1337140:CDS 55.0%
GTAGGCAGGGGTAAAGTGGT+AGG - tig0001464:14157-14176 None:intergenic 55.0%
GGAACAAGTGCATCTTCCGG+CGG + tig0001464:15932-15951 Msa1337140:intron 55.0%
!! GCACGACAAACGCATTGGCT+AGG + tig0001464:16633-16652 Msa1337140:CDS 55.0%
TGGCCCAGGTGGAAGAGGTA+AGG - tig0001464:13705-13724 None:intergenic 60.0%
GTTTCCGACGATGGGCCATG+GGG - tig0001464:13729-13748 None:intergenic 60.0%
GGTTTCCGACGATGGGCCAT+GGG - tig0001464:13730-13749 None:intergenic 60.0%
AGGTTTCCGACGATGGGCCA+TGG - tig0001464:13731-13750 None:intergenic 60.0%
GTACTGGGCCCATGTGAGGT+AGG - tig0001464:13751-13770 None:intergenic 60.0%
! TGTGGTACTGGGCCCATGTG+AGG - tig0001464:13755-13774 None:intergenic 60.0%
GCTAGGGCATGGTGTGGTAC+TGG - tig0001464:13767-13786 None:intergenic 60.0%
TTCCACCTGGGCCAACCCCA+TGG + tig0001464:13711-13730 Msa1337140:CDS 65.0%
CCAACCCCATGGCCCATCGT+CGG + tig0001464:13722-13741 Msa1337140:CDS 65.0%
GGGCCAAAGCTGCTAGGGCA+TGG - tig0001464:13778-13797 None:intergenic 65.0%
! TGGCGCCGGAGTTAGTTGGC+CGG - tig0001464:13913-13932 None:intergenic 65.0%
!! GGGGTTGGCCCAGGTGGAAG+AGG - tig0001464:13710-13729 None:intergenic 70.0%
!! ATGGGCCATGGGGTTGGCCC+AGG - tig0001464:13719-13738 None:intergenic 70.0%
CCGACGATGGGCCATGGGGT+TGG - tig0001464:13725-13744 None:intergenic 70.0%
!! GGCCATGGGGTTGGCCCAGG+TGG - tig0001464:13716-13735 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0001464 gene 13584 17000 13584 ID=Msa1337140;Name=Msa1337140
tig0001464 mRNA 13584 17000 13584 ID=Msa1337140-mRNA-1;Parent=Msa1337140;Name=Msa1337140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=36|1|0.5|1|1|1|2|0|297
tig0001464 exon 13584 14063 13584 ID=Msa1337140-mRNA-1:exon:1001;Parent=Msa1337140-mRNA-1
tig0001464 exon 16554 17000 16554 ID=Msa1337140-mRNA-1:exon:1002;Parent=Msa1337140-mRNA-1
tig0001464 five_prime_UTR 13584 13619 13584 ID=Msa1337140-mRNA-1:five_prime_utr;Parent=Msa1337140-mRNA-1
tig0001464 CDS 13620 14063 13620 ID=Msa1337140-mRNA-1:cds;Parent=Msa1337140-mRNA-1
tig0001464 CDS 16554 17000 16554 ID=Msa1337140-mRNA-1:cds;Parent=Msa1337140-mRNA-1
Gene Sequence

>Msa1337140

ATGTCTCCATTGATTATTGTCTTTGCTACAATTGCAGCAGCGATTCTCATTTACCGTCTCTTAAACCTAATAACCAAACCTTCCTTACCTCTTCCACCTGGGCCAACCCCATGGCCCATCGTCGGAAACCTACCTCACATGGGCCCAGTACCACACCATGCCCTAGCAGCTTTGGCCCTTAAACACGGTCCTCTCATGCATCTTCGTCTGGGCTACGTCAACGTGATTGTCGCTGCTTCCGCCTCCGTTGCTGAACAATTCTTAAAGGTTCATGATACCAATTTCTCTAGCCGGCCAACTAACTCCGGCGCCAAATACTTAGCATATAATTATCAAGATCTTGTGTTTGCTCCTTATGGACCACGGTGGCGTTTGTTAAGGAAAATATCGTACGTTCACATGTTCTCTTCTAAGGCTTTGGATGAATTTAGACACATACGCCAGGAAGAGGTAGCAAGATTGATCCGCAATTTGGCAAGTTCAGGGTCCAAAGCAGTAAACTTAGGACAAATGTTGAATGTATGCACGACAAACGCATTGGCTAGGGTAATGATAGGACGGCGAGTATTTAATGAGGGGAATGGTGGGTGTGAATGTGATCCTAGGGCTGATGAGTTTAAGTCTATGGTGGTTGAACTTATGGTATTGGCTGGTGTTTTCAATATTGGTGATTTTATTCCTGCTTTGGAGTGGTTGGATCTTCAAGGTGTGCAAGGTAAGATGAAAAAATTACACAAAAGGTTTGATGCATTTTTAACAAGCATTATTGAGGACCATAGGATTTCTAAGAGTGAGAAGCACAATGATTTGTTGAGTACGTTGTTGTCACTCAAAGAAAAACTTCCTGAGGATGAAGACAAACTCAATGATACTGAGATCAAAGCATTACTC
Protein sequence

>Msa1337140

MSPLIIVFATIAAAILIYRLLNLITKPSLPLPPGPTPWPIVGNLPHMGPVPHHALAALALKHGPLMHLRLGYVNVIVAASASVAEQFLKVHDTNFSSRPTNSGAKYLAYNYQDLVFAPYGPRWRLLRKISYVHMFSSKALDEFRHIRQEEVARLIRNLASSGSKAVNLGQMLNVCTTNALARVMIGRRVFNEGNGGCECDPRADEFKSMVVELMVLAGVFNIGDFIPALEWLDLQGVQGKMKKLHKRFDAFLTSIIEDHRISKSEKHNDLLSTLLSLKEKLPEDEDKLNDTEIKALL