Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340900 | XP_013463768.1 | 95.187 | 374 | 10 | 2 | 44 | 409 | 371 | 744 | 0.0 | 722 |
| Msa1340900 | XP_013463768.1 | 97.436 | 39 | 1 | 0 | 6 | 44 | 260 | 298 | 4.27e-14 | 87.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340900 | sp|F4JT76|VPS54_ARATH | 54.522 | 387 | 151 | 5 | 44 | 409 | 392 | 774 | 4.71e-118 | 370 |
| Msa1340900 | sp|F4JT76|VPS54_ARATH | 87.179 | 39 | 5 | 0 | 6 | 44 | 279 | 317 | 2.32e-14 | 79.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340900 | A0A072V8X8 | 95.187 | 374 | 10 | 2 | 44 | 409 | 371 | 744 | 0.0 | 722 |
| Msa1340900 | A0A072V8X8 | 97.436 | 39 | 1 | 0 | 6 | 44 | 260 | 298 | 2.04e-14 | 87.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1044150 | Msa1340900 | 0.808026 | 3.790070e-50 | -8.615850e-47 |
| Msa1101010 | Msa1340900 | 0.828004 | 1.144073e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340900 | MtrunA17_Chr2g0303321 | 95.187 | 374 | 10 | 2 | 44 | 409 | 371 | 744 | 0.0 | 722 |
| Msa1340900 | MtrunA17_Chr2g0303321 | 97.436 | 39 | 1 | 0 | 6 | 44 | 260 | 298 | 3.92e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340900 | AT4G19490.1 | 54.522 | 387 | 151 | 5 | 44 | 409 | 392 | 774 | 4.78e-119 | 370 |
| Msa1340900 | AT4G19490.1 | 87.179 | 39 | 5 | 0 | 6 | 44 | 279 | 317 | 2.35e-15 | 79.0 |
| Msa1340900 | AT4G19490.2 | 54.522 | 387 | 151 | 5 | 44 | 409 | 392 | 774 | 4.78e-119 | 370 |
| Msa1340900 | AT4G19490.2 | 87.179 | 39 | 5 | 0 | 6 | 44 | 279 | 317 | 2.35e-15 | 79.0 |
Find 75 sgRNAs with CRISPR-Local
Find 803 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGGATGCATTGTCTTC+TGG | 0.094351 | tig0004591:-12431 | Msa1340900:CDS |
| TGTAAGATGGGCAAAGCTTC+TGG | 0.226028 | tig0004591:-12900 | Msa1340900:CDS |
| GATTTACTATGACCTCTATT+TGG | 0.232799 | tig0004591:+12263 | Msa1340900:intergenic |
| CATTGGATGCATTGTCTTCT+GGG | 0.257495 | tig0004591:-12430 | Msa1340900:CDS |
| TTATCTTCTTCAACACCATT+AGG | 0.265383 | tig0004591:+12404 | Msa1340900:intergenic |
| TACCATGAACCTCACTTTCT+TGG | 0.288818 | tig0004591:+14138 | Msa1340900:intergenic |
| TTCAAACAGTTACCATGATT+TGG | 0.290772 | tig0004591:-12381 | Msa1340900:CDS |
| CTATCTCCACCCTTGTTTCC+TGG | 0.298249 | tig0004591:+12495 | Msa1340900:intergenic |
| TGATGATTTGCAACATTTGC+TGG | 0.374859 | tig0004591:-23695 | Msa1340900:intron |
| TATCTTCTTCAACACCATTA+GGG | 0.375458 | tig0004591:+12405 | Msa1340900:intergenic |
| GAAGCTCGAGCAGCAATAAC+TGG | 0.375937 | tig0004591:+18110 | Msa1340900:intergenic |
| CTAACAGATTGGTGGAAGAT+TGG | 0.380927 | tig0004591:-12705 | Msa1340900:intron |
| TTGTCTTCTGGGGACCCTAA+TGG | 0.382958 | tig0004591:-12419 | Msa1340900:CDS |
| ACCATGAACCTCACTTTCTT+GGG | 0.391003 | tig0004591:+14139 | Msa1340900:intergenic |
| GTAAGATGGGCAAAGCTTCT+GGG | 0.407898 | tig0004591:-12899 | Msa1340900:CDS |
| GTTGCATCTGCAGATTGTGC+TGG | 0.409563 | tig0004591:-23733 | Msa1340900:CDS |
| TAACAGATTGGTGGAAGATT+GGG | 0.423692 | tig0004591:-12704 | Msa1340900:intron |
| TTGATTGTCAGCATGATTCT+CGG | 0.424026 | tig0004591:-12637 | Msa1340900:CDS |
| TGCAGATTGTGCTGGAGCAC+TGG | 0.426005 | tig0004591:-23725 | Msa1340900:CDS |
| CCAACACCTTTGTAGAAAAG+AGG | 0.433653 | tig0004591:+12191 | Msa1340900:intergenic |
| TCCGTGAAAAGATGGACCCT+TGG | 0.445255 | tig0004591:+14079 | Msa1340900:intergenic |
| ATAATGGATTGAAATTCATC+AGG | 0.457894 | tig0004591:+12467 | Msa1340900:intergenic |
| GTTGCTCAAAATCCATTCAA+TGG | 0.459861 | tig0004591:+14232 | Msa1340900:intergenic |
| ATTTGGTTTCTTAGATTCAT+CGG | 0.461938 | tig0004591:+12280 | Msa1340900:intergenic |
| CTGTAGCTGTAATGAACTCA+TGG | 0.467812 | tig0004591:+12813 | Msa1340900:intergenic |
| TGATTGTCAGCATGATTCTC+GGG | 0.478005 | tig0004591:-12636 | Msa1340900:intron |
| TCCCAAGAAAGTGAGGTTCA+TGG | 0.483565 | tig0004591:-14140 | Msa1340900:CDS |
| CATTGTTAGTCGCCAAATCA+TGG | 0.493682 | tig0004591:+12369 | Msa1340900:intergenic |
| CCATCCTAGGTTGAAACTGC+AGG | 0.501496 | tig0004591:-12861 | Msa1340900:CDS |
| TGAAAACAGCACTCAAAAGA+TGG | 0.505515 | tig0004591:+17684 | Msa1340900:intergenic |
| TGCTGCTCGAGCTTCAGAAT+CGG | 0.505667 | tig0004591:-18102 | Msa1340900:CDS |
| GACTGTCCAGTGTCTGCCAT+CGG | 0.509078 | tig0004591:+12338 | Msa1340900:intergenic |
| GTGATACTGCTCATGTAAGA+TGG | 0.511275 | tig0004591:-12913 | Msa1340900:CDS |
| CTGACAATCAATAAAAGCCT+TGG | 0.511746 | tig0004591:+12649 | Msa1340900:intergenic |
| TTCTGGAGACAGAGCTGTAG+AGG | 0.513880 | tig0004591:-18072 | Msa1340900:CDS |
| CAGTGCTTGACCAGGAAACA+AGG | 0.516208 | tig0004591:-12505 | Msa1340900:CDS |
| GCTCGGCCGATGGCAGACAC+TGG | 0.534162 | tig0004591:-12344 | Msa1340900:CDS |
| CCTGCAGTTTCAACCTAGGA+TGG | 0.534902 | tig0004591:+12861 | Msa1340900:intergenic |
| GAATCTAAGAAACCAAATAG+AGG | 0.536720 | tig0004591:-12275 | Msa1340900:CDS |
| CTGTCACATGATCTCTAAGA+TGG | 0.537362 | tig0004591:+22924 | Msa1340900:intergenic |
| ACCTCAAAAGAATGTTGCCA+AGG | 0.555014 | tig0004591:-14096 | Msa1340900:CDS |
| ATTGCAGGCACATTTAGTGC+GGG | 0.556696 | tig0004591:-14273 | Msa1340900:intron |
| TCCGTGCTACTCTCCATCCT+AGG | 0.564248 | tig0004591:-12874 | Msa1340900:CDS |
| CCAGAAGACAATGCATCCAA+TGG | 0.565992 | tig0004591:+12431 | Msa1340900:intergenic |
| ATTGGATGCATTGTCTTCTG+GGG | 0.566027 | tig0004591:-12429 | Msa1340900:CDS |
| GTTGCTGCAGCAATTGCGCA+TGG | 0.566203 | tig0004591:-14182 | Msa1340900:CDS |
| AATTAAAACTAACAGATTGG+TGG | 0.567362 | tig0004591:-12713 | Msa1340900:intron |
| TAACAATGATGCTCGGCCGA+TGG | 0.569587 | tig0004591:-12354 | Msa1340900:CDS |
| CCGTGGGATACTGCATTCAC+AGG | 0.573028 | tig0004591:-12672 | Msa1340900:CDS |
| AATTATGGCAGTGCTTGACC+AGG | 0.579081 | tig0004591:-12513 | Msa1340900:CDS |
| TTGGGATATTTCTGCAGCTG+CGG | 0.580755 | tig0004591:+14157 | Msa1340900:intergenic |
| TAGGATGGAGACGAGCTCAC+TGG | 0.580944 | tig0004591:-22962 | Msa1340900:CDS |
| CGATAGATCCTCAGAACAGA+GGG | 0.581171 | tig0004591:+18191 | Msa1340900:intergenic |
| GCAGGCACATTTAGTGCGGG+CGG | 0.584583 | tig0004591:-14270 | Msa1340900:intron |
| GACAGAGCTGTAGAGGCAGA+TGG | 0.588172 | tig0004591:-18065 | Msa1340900:intron |
| CTAAACTTCCCTCTGTTCTG+AGG | 0.589450 | tig0004591:-18199 | Msa1340900:CDS |
| AGATTGGGATACAGCATCCG+TGG | 0.603988 | tig0004591:-12689 | Msa1340900:CDS |
| TAAGATGGGCAAAGCTTCTG+GGG | 0.604777 | tig0004591:-12898 | Msa1340900:CDS |
| CAAAGGTGTTGGTTATCACA+TGG | 0.608161 | tig0004591:-12180 | None:intergenic |
| GATACTGCATTCACAGGCCA+AGG | 0.608690 | tig0004591:-12666 | Msa1340900:CDS |
| TGATACTGCTCATGTAAGAT+GGG | 0.609097 | tig0004591:-12912 | Msa1340900:CDS |
| AACTGGAAGCAACTCAGCAA+CGG | 0.610286 | tig0004591:+18127 | Msa1340900:intergenic |
| GATTGCAGGCACATTTAGTG+CGG | 0.612804 | tig0004591:-14274 | Msa1340900:intron |
| AACTCCTGCAGTTTCAACCT+AGG | 0.615419 | tig0004591:+12857 | Msa1340900:intergenic |
| AGAAATATCCCAAGAAAGTG+AGG | 0.616680 | tig0004591:-14147 | Msa1340900:CDS |
| CCTCAAAAGAATGTTGCCAA+GGG | 0.627962 | tig0004591:-14095 | Msa1340900:CDS |
| ACCTAGGATGGAGAGTAGCA+CGG | 0.636757 | tig0004591:+12873 | Msa1340900:intergenic |
| TGGCGACTAACAATGATGCT+CGG | 0.651360 | tig0004591:-12361 | Msa1340900:CDS |
| TGGTTTCTTAGATTCATCGG+TGG | 0.656971 | tig0004591:+12283 | Msa1340900:intergenic |
| AGTGCTTGACCAGGAAACAA+GGG | 0.662267 | tig0004591:-12504 | Msa1340900:CDS |
| GATTGGGATACAGCATCCGT+GGG | 0.663900 | tig0004591:-12688 | Msa1340900:CDS |
| GCTTGACCAGGAAACAAGGG+TGG | 0.675012 | tig0004591:-12501 | Msa1340900:CDS |
| TCGATAGATCCTCAGAACAG+AGG | 0.676616 | tig0004591:+18190 | Msa1340890:intergenic |
| TGTAGCTGTAATGAACTCAT+GGG | 0.683392 | tig0004591:+12814 | Msa1340890:intergenic |
| CCTGTGAATGCAGTATCCCA+CGG | 0.692228 | tig0004591:+12672 | Msa1340890:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATATTCAAAATCT+AGG | + | tig0004591:13614-13633 | Msa1340900:intergenic | 10.0% |
| !! | AAATAATATTTATCAAAACA+CGG | - | tig0004591:13937-13956 | Msa1340900:intron | 10.0% |
| !! | TAATGATGAAATAAAATAAA+TGG | + | tig0004591:15326-15345 | Msa1340900:intergenic | 10.0% |
| !!! | GTATTTTTTGAATTAAAAAA+AGG | + | tig0004591:15388-15407 | Msa1340900:intergenic | 10.0% |
| !!! | TTTTTAACATCTTTTATATT+AGG | - | tig0004591:15768-15787 | Msa1340900:intron | 10.0% |
| !!! | ATTAATTTTTTATCTTGATT+TGG | + | tig0004591:16544-16563 | Msa1340900:intergenic | 10.0% |
| !! | AGAAATTAAATCTTATATAT+GGG | - | tig0004591:17929-17948 | Msa1340900:intron | 10.0% |
| !! | TATAAAACAAAATTTATTGT+TGG | + | tig0004591:19758-19777 | Msa1340900:intergenic | 10.0% |
| !! | AAATAATATATAAAACACAA+CGG | + | tig0004591:23343-23362 | Msa1340900:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15478-15497 | Msa1340900:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15478-15497 | Msa1340900:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15478-15497 | Msa1340900:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15478-15497 | Msa1340900:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15478-15497 | Msa1340900:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15478-15497 | Msa1340900:intron | 100.0% |
| !!! | TTTTGAACTGAATAAAATTT+AGG | + | tig0004591:12473-12492 | Msa1340900:intergenic | 15.0% |
| !!! | AAAAATATTGACTCTTAAAT+GGG | + | tig0004591:13512-13531 | Msa1340900:intergenic | 15.0% |
| !!! | AAAAAATATTGACTCTTAAA+TGG | + | tig0004591:13513-13532 | Msa1340900:intergenic | 15.0% |
| !!! | TTCTGTTATTATATTTTCTT+GGG | + | tig0004591:13970-13989 | Msa1340900:intergenic | 15.0% |
| !!! | TTTCTGTTATTATATTTTCT+TGG | + | tig0004591:13971-13990 | Msa1340900:intergenic | 15.0% |
| !! | TGAAATAAAATAAATGGAAA+AGG | + | tig0004591:15320-15339 | Msa1340900:intergenic | 15.0% |
| !! | AACATTACAAATTCATAATA+AGG | + | tig0004591:15585-15604 | Msa1340900:intergenic | 15.0% |
| !! | TTATTATGAATTTGTAATGT+TGG | - | tig0004591:15584-15603 | Msa1340900:intron | 15.0% |
| !! | CAAAAAAAATTACCATTTAA+AGG | - | tig0004591:15650-15669 | Msa1340900:intron | 15.0% |
| !!! | ACATTCTTATCTTTTTATTT+CGG | + | tig0004591:16389-16408 | Msa1340900:intergenic | 15.0% |
| !!! | TAGTTCATCAATTATTTTTA+TGG | + | tig0004591:16879-16898 | Msa1340900:intergenic | 15.0% |
| !! | CAGAAATTAAATCTTATATA+TGG | - | tig0004591:17928-17947 | Msa1340900:intron | 15.0% |
| !!! | TTTATTGATAGTAATGAAAA+TGG | - | tig0004591:18563-18582 | Msa1340900:intron | 15.0% |
| !! | TTAAAAAACAAAGAATGAAA+TGG | + | tig0004591:19001-19020 | Msa1340900:intergenic | 15.0% |
| !!! | ATTCTTTGTTTTTTAAGTTA+CGG | - | tig0004591:19005-19024 | Msa1340900:intron | 15.0% |
| !! | ATATAATTTGATATGTGATT+CGG | + | tig0004591:19681-19700 | Msa1340900:intergenic | 15.0% |
| !! | TACCAAAATAAAAAAAAAGT+GGG | - | tig0004591:20018-20037 | Msa1340900:intron | 15.0% |
| !!! | TTAATACTACTAAATGTTTT+GGG | + | tig0004591:20131-20150 | Msa1340900:intergenic | 15.0% |
| !!! | ATTAATACTACTAAATGTTT+TGG | + | tig0004591:20132-20151 | Msa1340900:intergenic | 15.0% |
| !!! | AGTTTATTTTCAATTACTAT+TGG | - | tig0004591:20315-20334 | Msa1340900:intron | 15.0% |
| !! | GGAATAAAAAATAACTAAAA+AGG | + | tig0004591:20689-20708 | Msa1340900:intergenic | 15.0% |
| !! | TCTAAGTATTATAAAAGTTA+AGG | + | tig0004591:21226-21245 | Msa1340900:intergenic | 15.0% |
| !!! | AAAAATTTCAGGTTAAATAT+AGG | - | tig0004591:21912-21931 | Msa1340900:intron | 15.0% |
| !! | TCTCTTAAAAAATATGATAA+TGG | - | tig0004591:22783-22802 | Msa1340900:intron | 15.0% |
| !! | CTCTTAAAAAATATGATAAT+GGG | - | tig0004591:22784-22803 | Msa1340900:intron | 15.0% |
| !!! | TCTTAAAAAATATGATAATG+GGG | - | tig0004591:22785-22804 | Msa1340900:intron | 15.0% |
| !!! | AAAAGTACATATTTTCATTT+TGG | - | tig0004591:23143-23162 | Msa1340900:intron | 15.0% |
| !! | AGTTTAAATTTCAAATTATG+TGG | - | tig0004591:23171-23190 | Msa1340900:intron | 15.0% |
| !! | TCAAAGCAATTATAATTGTA+GGG | + | tig0004591:12544-12563 | Msa1340900:intergenic | 20.0% |
| !! | TTCAAAGCAATTATAATTGT+AGG | + | tig0004591:12545-12564 | Msa1340900:intergenic | 20.0% |
| !! | TAAATATATCGTGATCAATA+TGG | + | tig0004591:12608-12627 | Msa1340900:intergenic | 20.0% |
| !! | TATATTTACTTTGTGATATG+CGG | - | tig0004591:12620-12639 | Msa1340900:intron | 20.0% |
| !! | GAACAATTCAATATTATGAT+TGG | + | tig0004591:12780-12799 | Msa1340900:intergenic | 20.0% |
| !!! | AATTGTTTTGATAAAGAAGT+AGG | - | tig0004591:13353-13372 | Msa1340900:intron | 20.0% |
| !!! | ATTGTTTTGATAAAGAAGTA+GGG | - | tig0004591:13354-13373 | Msa1340900:intron | 20.0% |
| !!! | AAAGTAGTGAATTTTAACTT+AGG | - | tig0004591:13560-13579 | Msa1340900:intron | 20.0% |
| !! | ATTTGGAAAAAAAAAAGTTG+TGG | - | tig0004591:15150-15169 | Msa1340900:intron | 20.0% |
| !! | ATAAATGGAAAAGGAAAAAA+GGG | + | tig0004591:15311-15330 | Msa1340900:intergenic | 20.0% |
| !! | AATAAATGGAAAAGGAAAAA+AGG | + | tig0004591:15312-15331 | Msa1340900:intergenic | 20.0% |
| !! | TAATTCTATAAATACACACA+TGG | - | tig0004591:15357-15376 | Msa1340900:intron | 20.0% |
| !! | TAATTCAAAAAATACACAGA+TGG | - | tig0004591:15393-15412 | Msa1340900:intron | 20.0% |
| !!! | TTGGCTATTTTTCTTTTAAA+AGG | - | tig0004591:15508-15527 | Msa1340900:intron | 20.0% |
| !!! | TGGCTATTTTTCTTTTAAAA+GGG | - | tig0004591:15509-15528 | Msa1340900:intron | 20.0% |
| !! | AATTTGTAATGTTGGATTAT+TGG | - | tig0004591:15592-15611 | Msa1340900:intron | 20.0% |
| !! | TTTACACGACATATATATAA+GGG | + | tig0004591:15712-15731 | Msa1340900:intergenic | 20.0% |
| !! | TACCATTATTATGTTATAGA+GGG | + | tig0004591:15924-15943 | Msa1340900:intergenic | 20.0% |
| !! | TTACCATTATTATGTTATAG+AGG | + | tig0004591:15925-15944 | Msa1340900:intergenic | 20.0% |
| !!! | TTTTAAATTTGTTTAAGGGT+TGG | + | tig0004591:16424-16443 | Msa1340900:intergenic | 20.0% |
| !!! | TCGCTTTTAAATTTGTTTAA+GGG | + | tig0004591:16428-16447 | Msa1340900:intergenic | 20.0% |
| !! | AACAAAAAATCATCAACAAA+TGG | + | tig0004591:16567-16586 | Msa1340900:intergenic | 20.0% |
| !!! | GTTATTCTTTTGTATTTTTG+AGG | - | tig0004591:16746-16765 | Msa1340900:intron | 20.0% |
| !! | AGTTAAACTTAAATCTTCAT+GGG | + | tig0004591:17415-17434 | Msa1340900:intergenic | 20.0% |
| !! | AAGTTAAACTTAAATCTTCA+TGG | + | tig0004591:17416-17435 | Msa1340900:intergenic | 20.0% |
| !! | AAAATAAACTGAAAAGCTTT+AGG | + | tig0004591:17545-17564 | Msa1340900:intergenic | 20.0% |
| !! | ATAGCATAACTATTGATATT+TGG | - | tig0004591:17901-17920 | Msa1340900:intron | 20.0% |
| !! | ATTAAATCTTATATATGGGT+TGG | - | tig0004591:17933-17952 | Msa1340900:intron | 20.0% |
| !! | TTAAATCTTATATATGGGTT+GGG | - | tig0004591:17934-17953 | Msa1340900:intron | 20.0% |
| !! | ACATCTCATAAAATGTAAAT+AGG | - | tig0004591:18060-18079 | Msa1340900:intron | 20.0% |
| !!! | TGTTTTCTACCAATTTAAAT+AGG | - | tig0004591:18536-18555 | Msa1340900:intron | 20.0% |
| !!! | GTTTTCTACCAATTTAAATA+GGG | - | tig0004591:18537-18556 | Msa1340900:intron | 20.0% |
| !! | ATTCTATTATTTAACCCTAA+TGG | - | tig0004591:18732-18751 | Msa1340900:intron | 20.0% |
| !! | TTCTATTATTTAACCCTAAT+GGG | - | tig0004591:18733-18752 | Msa1340900:intron | 20.0% |
| !! | CATTAGGATTAAATAATAAG+AGG | + | tig0004591:18759-18778 | Msa1340900:intergenic | 20.0% |
| !! | CTCTTATTATTTAATCCTAA+TGG | - | tig0004591:18757-18776 | Msa1340900:intron | 20.0% |
| !!! | TTAAGTTGATTATTAGTAAG+TGG | + | tig0004591:18784-18803 | Msa1340900:intergenic | 20.0% |
| !! | AAATTAGTAGGTGATTAATT+AGG | + | tig0004591:18808-18827 | Msa1340900:intergenic | 20.0% |
| !!! | ATTTTTTATGCAACTTTACT+CGG | + | tig0004591:18909-18928 | Msa1340900:intergenic | 20.0% |
| !! | TTCCCTAATTAAGAATAATA+CGG | + | tig0004591:19170-19189 | Msa1340900:intergenic | 20.0% |
| !! | TATATATATATTGAGAGATG+AGG | + | tig0004591:19850-19869 | Msa1340900:intergenic | 20.0% |
| !! | ATATATGTGAAAATTGCAAA+AGG | + | tig0004591:19940-19959 | Msa1340900:intergenic | 20.0% |
| !! | GTACCAAAATAAAAAAAAAG+TGG | - | tig0004591:20017-20036 | Msa1340900:intron | 20.0% |
| !!! | TACCCACTTTTTTTTTATTT+TGG | + | tig0004591:20023-20042 | Msa1340900:intergenic | 20.0% |
| !!! | CATAAACAAAATGGTATTTT+AGG | + | tig0004591:20081-20100 | Msa1340900:intergenic | 20.0% |
| !!! | CTAAAATACCATTTTGTTTA+TGG | - | tig0004591:20079-20098 | Msa1340900:intron | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+TGG | - | tig0004591:20178-20197 | Msa1340900:intron | 20.0% |
| !!! | TGTATCTAGTAATTTGAAAT+GGG | - | tig0004591:20179-20198 | Msa1340900:intron | 20.0% |
| !!! | TTTTTTTTGTCTGGAAAAAA+AGG | - | tig0004591:20223-20242 | Msa1340900:intron | 20.0% |
| !!! | GTTATTTTTTATTCCTTAAC+CGG | - | tig0004591:20694-20713 | Msa1340900:intron | 20.0% |
| !!! | TATTGTATTTTCTTGTATCA+AGG | + | tig0004591:20770-20789 | Msa1340900:intergenic | 20.0% |
| !! | ATTAAAACCAATCTAACATA+TGG | + | tig0004591:21330-21349 | Msa1340900:intergenic | 20.0% |
| !!! | AAGTTTTTAACATTACAAGT+TGG | + | tig0004591:21468-21487 | Msa1340900:intergenic | 20.0% |
| !! | TATATTTCATGTACAAGAAT+AGG | - | tig0004591:21526-21545 | Msa1340900:intron | 20.0% |
| !!! | GAAATTTTTTGACATATTTG+AGG | + | tig0004591:21901-21920 | Msa1340900:intergenic | 20.0% |
| !! | CAAATATGTCAAAAAATTTC+AGG | - | tig0004591:21901-21920 | Msa1340900:intron | 20.0% |
| !!! | TAGTAATTTTTCTGTTTTAG+AGG | - | tig0004591:22692-22711 | Msa1340900:intron | 20.0% |
| !!! | CTTAAAAAATATGATAATGG+GGG | - | tig0004591:22786-22805 | Msa1340900:intron | 20.0% |
| !! | CAATTAAAACACAAAAGTAA+TGG | + | tig0004591:22910-22929 | Msa1340900:intergenic | 20.0% |
| !!! | CAATCTGTTAGTTTTAATTT+GGG | + | tig0004591:23218-23237 | Msa1340900:intergenic | 20.0% |
| ! | GATAAACAAAACTAAGTCTA+CGG | + | tig0004591:12326-12345 | Msa1340900:intergenic | 25.0% |
| ! | GTCAACTTAATAGAATATGA+TGG | - | tig0004591:12427-12446 | Msa1340900:CDS | 25.0% |
| ! | TATTCAGTTCAAAAAATCCA+AGG | - | tig0004591:12479-12498 | Msa1340900:CDS | 25.0% |
| ! | GGAAAATATATTCTAAGTAG+AGG | + | tig0004591:12522-12541 | Msa1340900:intergenic | 25.0% |
| ! | CAAAGCAATTATAATTGTAG+GGG | + | tig0004591:12543-12562 | Msa1340900:intergenic | 25.0% |
| !!! | AAGCATTGAAATTAGAAAGA+AGG | - | tig0004591:12563-12582 | Msa1340900:intron | 25.0% |
| !!! | TTTCCTTTTTAGTCTGTTAA+TGG | - | tig0004591:12857-12876 | Msa1340900:CDS | 25.0% |
| !!! | AGTCTATGTTTTAACATCAA+TGG | - | tig0004591:12883-12902 | Msa1340900:CDS | 25.0% |
| !!! | GTCTATGTTTTAACATCAAT+GGG | - | tig0004591:12884-12903 | Msa1340900:CDS | 25.0% |
| ! | GTTGAATTATAAGGTTTCTT+TGG | - | tig0004591:13185-13204 | Msa1340900:intron | 25.0% |
| !!! | TTTTGCTTTTGATCTTTAGA+TGG | - | tig0004591:13218-13237 | Msa1340900:intron | 25.0% |
| !! | TGTGAAATCTTTTGTTCTTA+TGG | - | tig0004591:13320-13339 | Msa1340900:intron | 25.0% |
| !!! | TTGTTTTGATAAAGAAGTAG+GGG | - | tig0004591:13355-13374 | Msa1340900:intron | 25.0% |
| !!! | TTTTCACTTCTGTTTCTTTT+AGG | + | tig0004591:13410-13429 | Msa1340900:intergenic | 25.0% |
| ! | ATTGGTAAACTTGATAAATG+TGG | + | tig0004591:13457-13476 | Msa1340900:intergenic | 25.0% |
| !! | TCAAAATGATGTGTTTTACT+TGG | + | tig0004591:13722-13741 | Msa1340900:intergenic | 25.0% |
| ! | TTGAAATAAGTATAAGTAGC+AGG | + | tig0004591:14132-14151 | Msa1340900:intergenic | 25.0% |
| ! | TTCGAAAAACATGAGTTTAA+AGG | + | tig0004591:14252-14271 | Msa1340900:intergenic | 25.0% |
| ! | ACTTGAGAAAGAAAATCAAA+AGG | - | tig0004591:14696-14715 | Msa1340900:intron | 25.0% |
| ! | ACATAAACCACAAATCTAAT+AGG | + | tig0004591:14742-14761 | Msa1340900:intergenic | 25.0% |
| ! | TTAGATTTGTGGTTTATGTT+TGG | - | tig0004591:14743-14762 | Msa1340900:intron | 25.0% |
| ! | AAATGAGAGAGATTCAAAAT+GGG | - | tig0004591:14797-14816 | Msa1340900:intron | 25.0% |
| !! | AAAGTGGACATAAATTTTTG+TGG | - | tig0004591:14827-14846 | Msa1340900:intron | 25.0% |
| !! | AAGTGGACATAAATTTTTGT+GGG | - | tig0004591:14828-14847 | Msa1340900:intron | 25.0% |
| !! | TAAATTTTTGTGGGTAGTTA+AGG | - | tig0004591:14837-14856 | Msa1340900:intron | 25.0% |
| ! | TAAATGGAAAAGGAAAAAAG+GGG | + | tig0004591:15310-15329 | Msa1340900:intergenic | 25.0% |
| !! | AAATTAGTGTTTTGCAAAAG+AGG | - | tig0004591:15442-15461 | Msa1340900:intron | 25.0% |
| !!! | CTTTTAAAATGTAGCGATAT+TGG | + | tig0004591:15537-15556 | Msa1340900:intergenic | 25.0% |
| !!! | ATCGCTACATTTTAAAAGTT+AGG | - | tig0004591:15539-15558 | Msa1340900:intron | 25.0% |
| !!! | TCGCTACATTTTAAAAGTTA+GGG | - | tig0004591:15540-15559 | Msa1340900:intron | 25.0% |
| ! | CTTTACACGACATATATATA+AGG | + | tig0004591:15713-15732 | Msa1340900:intergenic | 25.0% |
| ! | CTTATATATATGTCGTGTAA+AGG | - | tig0004591:15711-15730 | Msa1340900:intron | 25.0% |
| ! | TTCTTCATGTAAAATGTAGT+TGG | + | tig0004591:15886-15905 | Msa1340900:intergenic | 25.0% |
| ! | TACCCTCTATAACATAATAA+TGG | - | tig0004591:15919-15938 | Msa1340900:intron | 25.0% |
| !! | ATTTTATATGAATCTTGTGC+TGG | + | tig0004591:15963-15982 | Msa1340900:intergenic | 25.0% |
| ! | AAAAGAGACAAAACAAAAAG+AGG | - | tig0004591:15983-16002 | Msa1340900:intron | 25.0% |
| !!! | AACTTTGAAATCTTGAGTTT+TGG | + | tig0004591:16263-16282 | Msa1340900:intergenic | 25.0% |
| !!! | CATTTTAAAATAAAGCAACG+TGG | - | tig0004591:16335-16354 | Msa1340900:intron | 25.0% |
| !!! | GTCGCTTTTAAATTTGTTTA+AGG | + | tig0004591:16429-16448 | Msa1340900:intergenic | 25.0% |
| ! | AAGTAATCCTAATTATCAAC+TGG | + | tig0004591:16479-16498 | Msa1340900:intergenic | 25.0% |
| !!! | GTTGTTATTGTGTTTTTTTG+TGG | + | tig0004591:16511-16530 | Msa1340900:intergenic | 25.0% |
| !!! | ATCTTGATTTGGATAAAAGA+TGG | + | tig0004591:16533-16552 | Msa1340900:intergenic | 25.0% |
| !!! | GTTGATGATTTTTTGTTTAC+AGG | - | tig0004591:16570-16589 | Msa1340900:intron | 25.0% |
| ! | GTAGATATTGTGATTTATTG+TGG | + | tig0004591:16596-16615 | Msa1340900:intergenic | 25.0% |
| ! | TCAATTTCTATATCATGTCA+TGG | - | tig0004591:16667-16686 | Msa1340900:intron | 25.0% |
| ! | CAATTTCTATATCATGTCAT+GGG | - | tig0004591:16668-16687 | Msa1340900:intron | 25.0% |
| ! | AAATCACTATGAAGGATAAA+AGG | + | tig0004591:16782-16801 | Msa1340900:intergenic | 25.0% |
| !!! | AAGTTATTTTATGTGGAGTT+GGG | - | tig0004591:17054-17073 | Msa1340900:intron | 25.0% |
| ! | ACAATTACAGTCCATTAATT+AGG | - | tig0004591:17091-17110 | Msa1340900:intron | 25.0% |
| !! | ATGAAACTTGAAAGTATAGA+TGG | + | tig0004591:17143-17162 | Msa1340900:intergenic | 25.0% |
| ! | TGTAAGGGATATAAATGAAT+TGG | - | tig0004591:17268-17287 | Msa1340900:intron | 25.0% |
| !!! | GGAAAATTTATTTTGATTCC+AGG | + | tig0004591:17394-17413 | Msa1340900:intergenic | 25.0% |
| ! | ATCCTAAATTACGAATGTTA+GGG | + | tig0004591:17469-17488 | Msa1340900:intergenic | 25.0% |
| ! | TATCCTAAATTACGAATGTT+AGG | + | tig0004591:17470-17489 | Msa1340900:intergenic | 25.0% |
| !! | TTAAGATTTCACATGTTTTG+TGG | - | tig0004591:17490-17509 | Msa1340900:intron | 25.0% |
| !! | TAAGATTTCACATGTTTTGT+GGG | - | tig0004591:17491-17510 | Msa1340900:intron | 25.0% |
| ! | GAATCGTAAACATATCTTAT+AGG | + | tig0004591:17523-17542 | Msa1340900:intergenic | 25.0% |
| !!! | TTTAGCTTGTTTTGGTTTTA+TGG | - | tig0004591:17694-17713 | Msa1340900:CDS | 25.0% |
| !! | TTTATGGTTTTCTTATTCTC+AGG | - | tig0004591:17710-17729 | Msa1340900:CDS | 25.0% |
| !! | TAAATCTTATATATGGGTTG+GGG | - | tig0004591:17935-17954 | Msa1340900:intron | 25.0% |
| !! | ACTCAAACATAATTTTTGTG+TGG | - | tig0004591:17990-18009 | Msa1340900:intron | 25.0% |
| ! | AACAAATTGTTACTGTTCAA+TGG | + | tig0004591:18022-18041 | Msa1340900:intergenic | 25.0% |
| !!! | GAAAAGTGCTTATAAAAGAA+AGG | + | tig0004591:18138-18157 | Msa1340900:intergenic | 25.0% |
| ! | TACAAGAATTATAGTCTAGA+TGG | + | tig0004591:18312-18331 | Msa1340900:intergenic | 25.0% |
| !! | ATAAAGCACCCTATTTAAAT+TGG | + | tig0004591:18548-18567 | Msa1340900:intergenic | 25.0% |
| !! | ACAGAATAAGTTTTCTGTTA+GGG | + | tig0004591:18663-18682 | Msa1340900:intergenic | 25.0% |
| !!! | GGATGTTTTAAGAAATTAGT+AGG | + | tig0004591:18820-18839 | Msa1340900:intergenic | 25.0% |
| ! | TCCCGTATTATTCTTAATTA+GGG | - | tig0004591:19165-19184 | Msa1340900:intron | 25.0% |
| ! | TCCCTAATTAAGAATAATAC+GGG | + | tig0004591:19169-19188 | Msa1340900:intergenic | 25.0% |
| ! | TTAATTAGGGAACATTACTT+AGG | - | tig0004591:19178-19197 | Msa1340900:intron | 25.0% |
| ! | TTTACAATATCTCAACACTT+GGG | + | tig0004591:19289-19308 | Msa1340900:intergenic | 25.0% |
| !! | TTTTACAATATCTCAACACT+TGG | + | tig0004591:19290-19309 | Msa1340900:intergenic | 25.0% |
| ! | GAGATATTGTAAAATAGTCT+TGG | - | tig0004591:19296-19315 | Msa1340900:intron | 25.0% |
| ! | CAATAGGATAATATCTAAAC+TGG | + | tig0004591:19324-19343 | Msa1340900:intergenic | 25.0% |
| ! | ATATTATCCTATTGTATTCC+TGG | - | tig0004591:19330-19349 | Msa1340900:intron | 25.0% |
| ! | TATTATCCTATTGTATTCCT+GGG | - | tig0004591:19331-19350 | Msa1340900:intron | 25.0% |
| ! | TAATTAATCGCGAAAGATTA+GGG | + | tig0004591:19393-19412 | Msa1340900:intergenic | 25.0% |
| !!! | GTTTGCGTTTTTTTGTTTAA+TGG | - | tig0004591:19441-19460 | Msa1340900:intron | 25.0% |
| !! | TTTTGTAATACACACACAAA+AGG | + | tig0004591:19575-19594 | Msa1340900:intergenic | 25.0% |
| ! | TGTATTACAAAAGTCACTAA+TGG | - | tig0004591:19583-19602 | Msa1340900:intron | 25.0% |
| !! | GTATCTAGTAATTTGAAATG+GGG | - | tig0004591:20180-20199 | Msa1340900:intron | 25.0% |
| ! | TGAAATGGGGATTATATTTA+CGG | - | tig0004591:20193-20212 | Msa1340900:intron | 25.0% |
| ! | AAAAAAAGGAGCTTATATTG+AGG | - | tig0004591:20237-20256 | Msa1340900:intron | 25.0% |
| !! | ACTGTATTTTCATGTATCAA+TGG | + | tig0004591:20298-20317 | Msa1340900:intergenic | 25.0% |
| ! | TCAAAATGATATCTATAGCA+AGG | + | tig0004591:20424-20443 | Msa1340900:intergenic | 25.0% |
| ! | ATTTCTCATTAACTGTGAAA+AGG | - | tig0004591:20452-20471 | Msa1340900:intron | 25.0% |
| ! | TTTCTCATTAACTGTGAAAA+GGG | - | tig0004591:20453-20472 | Msa1340900:intron | 25.0% |
| !!! | ATATTTTTATACACGTGAGA+TGG | - | tig0004591:20484-20503 | Msa1340900:intron | 25.0% |
| ! | AATAACTAAAAAGGACACTT+GGG | + | tig0004591:20680-20699 | Msa1340900:intergenic | 25.0% |
| ! | AAATAACTAAAAAGGACACT+TGG | + | tig0004591:20681-20700 | Msa1340900:intergenic | 25.0% |
| !! | TATTTTCTTGTATCAAGGAA+AGG | + | tig0004591:20765-20784 | Msa1340900:intergenic | 25.0% |
| ! | CTACGGAAGATTTATTATAT+AGG | - | tig0004591:20978-20997 | Msa1340900:intron | 25.0% |
| !! | ACCTAAAGACATTTTATTCA+TGG | - | tig0004591:21254-21273 | Msa1340900:intron | 25.0% |
| !! | AACTTTTCCATATGTTAGAT+TGG | - | tig0004591:21320-21339 | Msa1340900:intron | 25.0% |
| ! | CATTAAACCTTCATTATCAA+TGG | - | tig0004591:21408-21427 | Msa1340900:intron | 25.0% |
| !! | TTACATGTTTTATCTTCCTA+GGG | - | tig0004591:21486-21505 | Msa1340900:intron | 25.0% |
| ! | AAAGGTAAATTTCAGTAACA+TGG | + | tig0004591:21574-21593 | Msa1340900:intergenic | 25.0% |
| !!! | TTTTTCTTTTTAGTGATTGC+AGG | - | tig0004591:21644-21663 | Msa1340900:intron | 25.0% |
| ! | TTGTTCTAATACACTTGTAA+TGG | - | tig0004591:21939-21958 | Msa1340900:intron | 25.0% |
| ! | AAGCATGTAATTTATGATGT+AGG | - | tig0004591:21999-22018 | Msa1340900:intron | 25.0% |
| ! | CAAATGTAATATATTGAACG+AGG | - | tig0004591:22202-22221 | Msa1340900:intron | 25.0% |
| ! | TACGAATAAGGATTCTATAA+AGG | + | tig0004591:22234-22253 | Msa1340900:intergenic | 25.0% |
| ! | TTTATAGAATCCTTATTCGT+AGG | - | tig0004591:22233-22252 | Msa1340900:intron | 25.0% |
| ! | TTGACATATAAATAGTGTTC+TGG | + | tig0004591:22274-22293 | Msa1340900:intergenic | 25.0% |
| !!! | GTTTTACACTAAAAGCATTA+TGG | - | tig0004591:22344-22363 | Msa1340900:intron | 25.0% |
| ! | ATGTTTGCAAAAGATAATGT+CGG | + | tig0004591:22587-22606 | Msa1340900:intergenic | 25.0% |
| ! | GATAAGATAAAACATTTGAG+AGG | + | tig0004591:22656-22675 | Msa1340900:intergenic | 25.0% |
| ! | AACAGAAAAATTACTACTGA+AGG | + | tig0004591:22688-22707 | Msa1340900:intergenic | 25.0% |
| !!! | AAGTACTGTATTTCTTTTAC+TGG | - | tig0004591:22727-22746 | Msa1340900:intron | 25.0% |
| ! | TTGCGAACATGAAATAAATT+GGG | + | tig0004591:22936-22955 | Msa1340900:intergenic | 25.0% |
| ! | TTTGCGAACATGAAATAAAT+TGG | + | tig0004591:22937-22956 | Msa1340900:intergenic | 25.0% |
| !!! | CCAATCTGTTAGTTTTAATT+TGG | + | tig0004591:23219-23238 | Msa1340900:intergenic | 25.0% |
| ! | CCAAATTAAAACTAACAGAT+TGG | - | tig0004591:23216-23235 | Msa1340900:intron | 25.0% |
| ! | AATTAAAACTAACAGATTGG+TGG | - | tig0004591:23219-23238 | Msa1340900:intron | 25.0% |
| ! | CATTTAGGTGTCAAAAATTA+TGG | - | tig0004591:23404-23423 | Msa1340900:intron | 25.0% |
| !!! | ATAATGGATTGAAATTCATC+AGG | + | tig0004591:23468-23487 | Msa1340900:intergenic | 25.0% |
| !! | ATTTGGTTTCTTAGATTCAT+CGG | + | tig0004591:23655-23674 | Msa1340900:intergenic | 25.0% |
| ATCGTGATCAATATGGATAA+TGG | + | tig0004591:12601-12620 | Msa1340900:intergenic | 30.0% | |
| TCAGTGATTATGCAAAGAAA+AGG | + | tig0004591:12663-12682 | Msa1340900:intergenic | 30.0% | |
| AACAGACTAAAAAGGAAACT+AGG | + | tig0004591:12855-12874 | Msa1340900:intergenic | 30.0% | |
| CTTATTGTTTCCTGTAACTT+TGG | - | tig0004591:12947-12966 | Msa1340900:CDS | 30.0% | |
| GCTTTATAGAATCCATAAAC+AGG | - | tig0004591:13031-13050 | Msa1340900:intron | 30.0% | |
| ! | AAAAAAGGTGTACCTGTTTA+TGG | + | tig0004591:13046-13065 | Msa1340900:intergenic | 30.0% |
| ATAGATCTGGACATCAAAAA+AGG | + | tig0004591:13061-13080 | Msa1340900:intergenic | 30.0% | |
| ATACACAATCTTGATAGATC+TGG | + | tig0004591:13074-13093 | Msa1340900:intergenic | 30.0% | |
| ! | TTTTTGTTCCCCTGTAATAA+TGG | - | tig0004591:13150-13169 | Msa1340900:intron | 30.0% |
| ! | TTTTGTTCCCCTGTAATAAT+GGG | - | tig0004591:13151-13170 | Msa1340900:intron | 30.0% |
| ATTCTCTTCCCATTATTACA+GGG | + | tig0004591:13162-13181 | Msa1340900:intergenic | 30.0% | |
| TATTCTCTTCCCATTATTAC+AGG | + | tig0004591:13163-13182 | Msa1340900:intergenic | 30.0% | |
| ! | TGTAATAATGGGAAGAGAAT+AGG | - | tig0004591:13162-13181 | Msa1340900:intron | 30.0% |
| ! | GTAATAATGGGAAGAGAATA+GGG | - | tig0004591:13163-13182 | Msa1340900:intron | 30.0% |
| GAGAATAGGGTTGAATTATA+AGG | - | tig0004591:13176-13195 | Msa1340900:intron | 30.0% | |
| TTTGATCTTTAGATGGTGAT+AGG | - | tig0004591:13225-13244 | Msa1340900:intron | 30.0% | |
| TTGATCTTTAGATGGTGATA+GGG | - | tig0004591:13226-13245 | Msa1340900:intron | 30.0% | |
| !! | GATGGGTTGAAAAAATGTTT+CGG | - | tig0004591:13274-13293 | Msa1340900:intron | 30.0% |
| ! | ATGGGTTGAAAAAATGTTTC+GGG | - | tig0004591:13275-13294 | Msa1340900:intron | 30.0% |
| GAACAAAAGATTTCACAGAT+AGG | + | tig0004591:13317-13336 | Msa1340900:intergenic | 30.0% | |
| !!! | TGTTTTGATAAAGAAGTAGG+GGG | - | tig0004591:13356-13375 | Msa1340900:intron | 30.0% |
| !!! | GATGGCATATTGATTTTCAA+TGG | + | tig0004591:13388-13407 | Msa1340900:intergenic | 30.0% |
| AGAAGTGAAAAATAAGACAG+TGG | - | tig0004591:13419-13438 | Msa1340900:intron | 30.0% | |
| ! | TACAAATGTTTTGTATCCAC+AGG | + | tig0004591:13651-13670 | Msa1340900:intergenic | 30.0% |
| !! | GAGAAGACTATCTTTGAAAT+TGG | - | tig0004591:13824-13843 | Msa1340900:intron | 30.0% |
| ATAAGTAGCAGGATAAATGA+AGG | + | tig0004591:14121-14140 | Msa1340900:intergenic | 30.0% | |
| AAGTCTAAACTCTTCTTTGT+TGG | + | tig0004591:14169-14188 | Msa1340900:intergenic | 30.0% | |
| ACAAAGAAGAGTTTAGACTT+TGG | - | tig0004591:14169-14188 | Msa1340900:CDS | 30.0% | |
| !! | ACTTCCAAATAGGTTTGTTA+GGG | + | tig0004591:14221-14240 | Msa1340900:intergenic | 30.0% |
| ! | ATTAGTGATCTTTTCAGACT+CGG | + | tig0004591:14311-14330 | Msa1340900:intergenic | 30.0% |
| TATGAAAATCCCTTTCACTA+TGG | - | tig0004591:14330-14349 | Msa1340900:intron | 30.0% | |
| ATCAGAGATAAAAACAGAGA+TGG | + | tig0004591:14601-14620 | Msa1340900:intergenic | 30.0% | |
| TTGAAATGAGAAAGGAAAGA+GGG | + | tig0004591:14629-14648 | Msa1340900:intergenic | 30.0% | |
| ATTGAAATGAGAAAGGAAAG+AGG | + | tig0004591:14630-14649 | Msa1340900:intergenic | 30.0% | |
| ! | TTTTCTTTCTCAAGTTCAAG+AGG | + | tig0004591:14691-14710 | Msa1340900:intergenic | 30.0% |
| ! | CATTTTGAATCTCTCTCATT+TGG | + | tig0004591:14798-14817 | Msa1340900:intergenic | 30.0% |
| CAAATGAGAGAGATTCAAAA+TGG | - | tig0004591:14796-14815 | Msa1340900:intron | 30.0% | |
| ACAAAGAAGATGTATAACTG+AGG | - | tig0004591:14871-14890 | Msa1340900:intron | 30.0% | |
| TAGAGAGAATGAAGGAAAAA+GGG | - | tig0004591:14922-14941 | Msa1340900:intron | 30.0% | |
| TAGAGAGAATGAAGGAAAAA+GGG | - | tig0004591:14922-14941 | Msa1340900:intron | 30.0% | |
| !! | ATTTTGAGTCACAAAAGTGT+GGG | - | tig0004591:15113-15132 | Msa1340900:intron | 30.0% |
| !!! | GCAAAACACTAATTTTGACT+TGG | + | tig0004591:15437-15456 | Msa1340900:intergenic | 30.0% |
| !! | CGCTACATTTTAAAAGTTAG+GGG | - | tig0004591:15541-15560 | Msa1340900:intron | 30.0% |
| !! | GCTACATTTTAAAAGTTAGG+GGG | - | tig0004591:15542-15561 | Msa1340900:intron | 30.0% |
| !! | CACTCTTTAAGACCTTTAAA+TGG | + | tig0004591:15665-15684 | Msa1340900:intergenic | 30.0% |
| !! | CAAAACAAAAAGAGGTGTTA+AGG | - | tig0004591:15991-16010 | Msa1340900:intron | 30.0% |
| !!! | GAGTTTTGGTAATGATATAG+TGG | + | tig0004591:16249-16268 | Msa1340900:intergenic | 30.0% |
| !! | TTCAAAGTTACAAGCATTGA+TGG | - | tig0004591:16274-16293 | Msa1340900:intron | 30.0% |
| AATTATCAACTGGAAAGTTC+AGG | + | tig0004591:16469-16488 | Msa1340900:intergenic | 30.0% | |
| !! | GAACTTTCCAGTTGATAATT+AGG | - | tig0004591:16469-16488 | Msa1340900:intron | 30.0% |
| !!! | TATTGTGTTTTTTTGTGGCT+TGG | + | tig0004591:16506-16525 | Msa1340900:intergenic | 30.0% |
| ! | GAAGATTTTTCATCAACCAA+AGG | + | tig0004591:16707-16726 | Msa1340900:intergenic | 30.0% |
| CAAAAGAATAACTAGTTGCA+TGG | + | tig0004591:16738-16757 | Msa1340900:intergenic | 30.0% | |
| GCATAAAGATGAAACTTTCA+AGG | + | tig0004591:16924-16943 | Msa1340900:intergenic | 30.0% | |
| !! | TGGCAACAAGTTATTTTATG+TGG | - | tig0004591:17047-17066 | Msa1340900:intron | 30.0% |
| !! | CAAGTTATTTTATGTGGAGT+TGG | - | tig0004591:17053-17072 | Msa1340900:intron | 30.0% |
| !! | ATTAATGGACTGTAATTGTG+CGG | + | tig0004591:17090-17109 | Msa1340900:intergenic | 30.0% |
| ATTACAGTCCATTAATTAGG+TGG | - | tig0004591:17094-17113 | Msa1340900:intron | 30.0% | |
| TCCTAAATTACGAATGTTAG+GGG | + | tig0004591:17468-17487 | Msa1340900:intergenic | 30.0% | |
| ! | AAGATTTCACATGTTTTGTG+GGG | - | tig0004591:17492-17511 | Msa1340900:intron | 30.0% |
| ! | TTCTAGAAGCTAAAAGAACA+AGG | + | tig0004591:17580-17599 | Msa1340900:intergenic | 30.0% |
| ! | GATATTATACTATTTTCCCC+AGG | - | tig0004591:17646-17665 | Msa1340900:intron | 30.0% |
| !!! | TTCTGGAATTTAGCTTGTTT+TGG | - | tig0004591:17686-17705 | Msa1340900:CDS | 30.0% |
| !! | AAATCTTATATATGGGTTGG+GGG | - | tig0004591:17936-17955 | Msa1340900:intron | 30.0% |
| AATTGTTACTGTTCAATGGT+TGG | + | tig0004591:18018-18037 | Msa1340900:intergenic | 30.0% | |
| CTAATGTTTAATAGTGACTC+AGG | - | tig0004591:18171-18190 | Msa1340900:CDS | 30.0% | |
| ACACATTAATGATATCTTGC+CGG | - | tig0004591:18370-18389 | Msa1340900:intron | 30.0% | |
| AACAGATGGTTTATAAAGCA+AGG | + | tig0004591:18467-18486 | Msa1340900:intergenic | 30.0% | |
| AAGCAAGAAGAAAAAACAGA+TGG | + | tig0004591:18481-18500 | Msa1340900:intergenic | 30.0% | |
| !!! | ATCTGTTTTTTCTTCTTGCT+TGG | - | tig0004591:18480-18499 | Msa1340900:intron | 30.0% |
| ATTATTGTTAATTCGCTTGC+TGG | - | tig0004591:18507-18526 | Msa1340900:intron | 30.0% | |
| ! | GACAGAATAAGTTTTCTGTT+AGG | + | tig0004591:18664-18683 | Msa1340900:intergenic | 30.0% |
| TCTCTTTATCTGTATGTACA+GGG | + | tig0004591:18710-18729 | Msa1340900:intergenic | 30.0% | |
| TTCTCTTTATCTGTATGTAC+AGG | + | tig0004591:18711-18730 | Msa1340900:intergenic | 30.0% | |
| AAATAATAAGAGGCCCATTA+GGG | + | tig0004591:18749-18768 | Msa1340900:intergenic | 30.0% | |
| TAAATAATAAGAGGCCCATT+AGG | + | tig0004591:18750-18769 | Msa1340900:intergenic | 30.0% | |
| TTATTAGTAAGTGGTCCATT+AGG | + | tig0004591:18775-18794 | Msa1340900:intergenic | 30.0% | |
| AAACAAAGAATGAAATGGAG+TGG | + | tig0004591:18996-19015 | Msa1340900:intergenic | 30.0% | |
| ACTCCAAGAAAATTTGATCT+TGG | - | tig0004591:19039-19058 | Msa1340900:intron | 30.0% | |
| ! | AGACCAAGATCAAATTTTCT+TGG | + | tig0004591:19045-19064 | Msa1340900:intergenic | 30.0% |
| AAAATTTGATCTTGGTCTCT+TGG | - | tig0004591:19047-19066 | Msa1340900:intron | 30.0% | |
| TTGTAGTGTAAGGAAGAAAA+AGG | - | tig0004591:19095-19114 | Msa1340900:intron | 30.0% | |
| CTAATTAAGAATAATACGGG+AGG | + | tig0004591:19166-19185 | Msa1340900:intergenic | 30.0% | |
| CTCCCGTATTATTCTTAATT+AGG | - | tig0004591:19164-19183 | Msa1340900:intron | 30.0% | |
| TTACTTAGGAAACACCTATA+TGG | - | tig0004591:19192-19211 | Msa1340900:intron | 30.0% | |
| TAGGTACTTACTTTCCATAT+AGG | + | tig0004591:19209-19228 | Msa1340900:intergenic | 30.0% | |
| TATGGAAAGTAAGTACCTAA+AGG | - | tig0004591:19210-19229 | Msa1340900:intron | 30.0% | |
| AGGGAAGATAATCAACTAAA+AGG | + | tig0004591:19374-19393 | Msa1340900:intergenic | 30.0% | |
| CTAATTAATCGCGAAAGATT+AGG | + | tig0004591:19394-19413 | Msa1340900:intergenic | 30.0% | |
| CTAATCTTTCGCGATTAATT+AGG | - | tig0004591:19392-19411 | Msa1340900:intron | 30.0% | |
| ATATATATTGAGAGATGAGG+AGG | + | tig0004591:19847-19866 | Msa1340900:intergenic | 30.0% | |
| ! | GCAAAAGGAGCATATAATAA+TGG | + | tig0004591:19925-19944 | Msa1340900:intergenic | 30.0% |
| GAACACATCCATAAACAAAA+TGG | + | tig0004591:20090-20109 | Msa1340900:intergenic | 30.0% | |
| !!! | GGACACTTTTTTTTTTTGTC+TGG | - | tig0004591:20214-20233 | Msa1340900:intron | 30.0% |
| TACTATTGGTATTCATAGCA+AGG | - | tig0004591:20329-20348 | Msa1340900:intron | 30.0% | |
| CTAGTAGTAGGATTAATGAT+AGG | + | tig0004591:20530-20549 | Msa1340900:intergenic | 30.0% | |
| !! | TATCAAGATTTGCTAGTAGT+AGG | + | tig0004591:20542-20561 | Msa1340900:intergenic | 30.0% |
| ATGTATATGCTTCACCTTAA+GGG | - | tig0004591:20591-20610 | Msa1340900:intron | 30.0% | |
| TAATATCCTGATTGTGTTTC+TGG | - | tig0004591:20646-20665 | Msa1340900:intron | 30.0% | |
| ATAATACCAGAAACACAATC+AGG | + | tig0004591:20655-20674 | Msa1340900:intergenic | 30.0% | |
| !!! | TTTTTTATTCCTTAACCGGT+AGG | - | tig0004591:20698-20717 | Msa1340900:intron | 30.0% |
| ! | TTTTTATTCCTTAACCGGTA+GGG | - | tig0004591:20699-20718 | Msa1340900:intron | 30.0% |
| ATAGCATAGAGCATAATGAT+CGG | + | tig0004591:20810-20829 | Msa1340900:intergenic | 30.0% | |
| GAAACAAAACTAAACACTCA+AGG | + | tig0004591:20863-20882 | Msa1340900:intergenic | 30.0% | |
| AGCTAGGATATATTTACAGA+AGG | - | tig0004591:21022-21041 | Msa1340900:intron | 30.0% | |
| GACAAAGAATTTCTAAACCA+GGG | + | tig0004591:21183-21202 | Msa1340900:intergenic | 30.0% | |
| AGACAAAGAATTTCTAAACC+AGG | + | tig0004591:21184-21203 | Msa1340900:intergenic | 30.0% | |
| GCCATGAATAAAATGTCTTT+AGG | + | tig0004591:21258-21277 | Msa1340900:intergenic | 30.0% | |
| ! | TACTGCATAATTTTGTCTCT+TGG | - | tig0004591:21383-21402 | Msa1340900:intron | 30.0% |
| TAGTCAATAATCCCTTTCTT+GGG | + | tig0004591:21440-21459 | Msa1340900:intergenic | 30.0% | |
| ATAGTCAATAATCCCTTTCT+TGG | + | tig0004591:21441-21460 | Msa1340900:intergenic | 30.0% | |
| ! | CTTACATGTTTTATCTTCCT+AGG | - | tig0004591:21485-21504 | Msa1340900:intron | 30.0% |
| AGAATAGGTATTATGTGTCT+AGG | - | tig0004591:21541-21560 | Msa1340900:intron | 30.0% | |
| GAATAGGTATTATGTGTCTA+GGG | - | tig0004591:21542-21561 | Msa1340900:intron | 30.0% | |
| ACTGAAATTTACCTTTCCAA+TGG | - | tig0004591:21578-21597 | Msa1340900:intron | 30.0% | |
| AAGTGAAAAAAGCCATTGAA+TGG | - | tig0004591:21688-21707 | Msa1340900:intron | 30.0% | |
| !!! | ACATTCTTTTGAGGTGAATA+TGG | + | tig0004591:21831-21850 | Msa1340900:intergenic | 30.0% |
| !! | CTTGTAATGGAAAGTTTTTC+TGG | - | tig0004591:21952-21971 | Msa1340900:intron | 30.0% |
| ! | GGATTCTTTTGTGTTTAGAT+TGG | - | tig0004591:21973-21992 | Msa1340900:intron | 30.0% |
| TATACTCCATTAGTGAGTTT+AGG | + | tig0004591:22050-22069 | Msa1340900:intergenic | 30.0% | |
| AAAAAGAGTTCCTACGAATA+AGG | + | tig0004591:22246-22265 | Msa1340900:intergenic | 30.0% | |
| !!! | AGCCTGGTTTTTAAAATGAT+GGG | + | tig0004591:22376-22395 | Msa1340900:intergenic | 30.0% |
| !!! | TAGCCTGGTTTTTAAAATGA+TGG | + | tig0004591:22377-22396 | Msa1340900:intergenic | 30.0% |
| !!! | AATTTCGTTTTTTTGTAGCC+TGG | + | tig0004591:22392-22411 | Msa1340900:intergenic | 30.0% |
| AGGCTACAAAAAAACGAAAT+TGG | - | tig0004591:22391-22410 | Msa1340900:intron | 30.0% | |
| TGCATGCTATAGAATATAGA+TGG | + | tig0004591:22533-22552 | Msa1340900:intergenic | 30.0% | |
| CATGCATGTCTAATATATCT+GGG | - | tig0004591:22547-22566 | Msa1340900:intron | 30.0% | |
| TACGGATTCAACATTGTTAA+GGG | + | tig0004591:22623-22642 | Msa1340900:intergenic | 30.0% | |
| ATACGGATTCAACATTGTTA+AGG | + | tig0004591:22624-22643 | Msa1340900:intergenic | 30.0% | |
| TTAACAATGTTGAATCCGTA+TGG | - | tig0004591:22623-22642 | Msa1340900:intron | 30.0% | |
| ATGCTTGTAAAGTTAGTACA+TGG | - | tig0004591:22836-22855 | Msa1340900:intron | 30.0% | |
| TTTCATGTTCGCAAAAAATC+TGG | - | tig0004591:22942-22961 | Msa1340900:CDS | 30.0% | |
| ! | TTAATTTGGGAGTTCAATCA+GGG | + | tig0004591:23205-23224 | Msa1340900:intergenic | 30.0% |
| !! | TTTAATTTGGGAGTTCAATC+AGG | + | tig0004591:23206-23225 | Msa1340900:intergenic | 30.0% |
| !!! | TAGAGATGAACAGTTTTTTG+AGG | + | tig0004591:23366-23385 | Msa1340900:intergenic | 30.0% |
| ! | TGGAAAAAGCGTATTGATAA+TGG | + | tig0004591:23484-23503 | Msa1340900:intergenic | 30.0% |
| !!! | TATCAATACGCTTTTTCCAT+TGG | - | tig0004591:23485-23504 | Msa1340900:intron | 30.0% |
| TATCTTCTTCAACACCATTA+GGG | + | tig0004591:23530-23549 | Msa1340900:intergenic | 30.0% | |
| TTATCTTCTTCAACACCATT+AGG | + | tig0004591:23531-23550 | Msa1340900:intergenic | 30.0% | |
| TTCAAACAGTTACCATGATT+TGG | - | tig0004591:23551-23570 | Msa1340900:intron | 30.0% | |
| GAATCTAAGAAACCAAATAG+AGG | - | tig0004591:23657-23676 | Msa1340900:intron | 30.0% | |
| GATTTACTATGACCTCTATT+TGG | + | tig0004591:23672-23691 | Msa1340900:intergenic | 30.0% | |
| ! | TGATGATTTGCAACATTTGC+TGG | - | tig0004591:12237-12256 | Msa1340900:CDS | 35.0% |
| AATCCAAGGTACAATGTAGT+TGG | - | tig0004591:12493-12512 | Msa1340900:CDS | 35.0% | |
| ATACCAACTACATTGTACCT+TGG | + | tig0004591:12499-12518 | Msa1340900:intergenic | 35.0% | |
| ATTTACTTTGTGATATGCGG+AGG | - | tig0004591:12623-12642 | Msa1340900:intron | 35.0% | |
| AGCTGATATCAATCAGTGTT+TGG | - | tig0004591:12744-12763 | Msa1340900:intron | 35.0% | |
| GCTGATATCAATCAGTGTTT+GGG | - | tig0004591:12745-12764 | Msa1340900:intron | 35.0% | |
| GCTGTAACTTAAAAGGAAAC+TGG | + | tig0004591:12802-12821 | Msa1340900:intergenic | 35.0% | |
| GATGTCAGCTGTAACTTAAA+AGG | + | tig0004591:12809-12828 | Msa1340900:intergenic | 35.0% | |
| ! | GTGCCATTAACAGACTAAAA+AGG | + | tig0004591:12863-12882 | Msa1340900:intergenic | 35.0% |
| ! | AAATTTTCTTCTCGTCCTTC+AGG | + | tig0004591:12913-12932 | Msa1340900:intergenic | 35.0% |
| TTGTTTCCTGTAACTTTGGT+AGG | - | tig0004591:12951-12970 | Msa1340900:CDS | 35.0% | |
| AATTTGCAGATGCAGGTTAA+CGG | + | tig0004591:13098-13117 | Msa1340900:intergenic | 35.0% | |
| TCAAATGAATTTGCAGATGC+AGG | + | tig0004591:13105-13124 | Msa1340900:intergenic | 35.0% | |
| TTCTCTTCCCATTATTACAG+GGG | + | tig0004591:13161-13180 | Msa1340900:intergenic | 35.0% | |
| !! | CACTTCTGTTTCTTTTAGGA+TGG | + | tig0004591:13406-13425 | Msa1340900:intergenic | 35.0% |
| TTTATAAGAATAGGTGCCTG+TGG | - | tig0004591:13632-13651 | Msa1340900:intron | 35.0% | |
| ACATTTGTACCACATGAATC+TGG | - | tig0004591:13662-13681 | Msa1340900:intron | 35.0% | |
| TAAGCAAGCCAATTACAGTA+GGG | - | tig0004591:13802-13821 | Msa1340900:intron | 35.0% | |
| TTTCTTCTTCTAACTTTGCC+TGG | - | tig0004591:13850-13869 | Msa1340900:intron | 35.0% | |
| AACTTTGCCTGGTTATGATT+AGG | - | tig0004591:13861-13880 | Msa1340900:intron | 35.0% | |
| ATCTCTACCTAATCATAACC+AGG | + | tig0004591:13871-13890 | Msa1340900:intergenic | 35.0% | |
| TCTCAAAATGTTATGTTGCG+TGG | + | tig0004591:14003-14022 | Msa1340900:intergenic | 35.0% | |
| GATTTCAGCTTCTCAAACAT+TGG | - | tig0004591:14021-14040 | Msa1340900:intron | 35.0% | |
| TCATTGTGCATTTGTGCTTA+AGG | - | tig0004591:14077-14096 | Msa1340900:CDS | 35.0% | |
| CAATCCCTAACAAACCTATT+TGG | - | tig0004591:14214-14233 | Msa1340900:CDS | 35.0% | |
| ! | GACTTCCAAATAGGTTTGTT+AGG | + | tig0004591:14222-14241 | Msa1340900:intergenic | 35.0% |
| ! | TTTAAAACCTGATACTGCAC+AGG | - | tig0004591:14277-14296 | Msa1340900:intron | 35.0% |
| TTAAAACCTGATACTGCACA+GGG | - | tig0004591:14278-14297 | Msa1340900:intron | 35.0% | |
| ! | TTTGAAACTTTGAACTCGTG+AGG | + | tig0004591:14524-14543 | Msa1340900:intergenic | 35.0% |
| GACTCTGATTGAAATGAGAA+AGG | + | tig0004591:14637-14656 | Msa1340900:intergenic | 35.0% | |
| TCAAGTTCAAGAGGAACAAA+AGG | + | tig0004591:14682-14701 | Msa1340900:intergenic | 35.0% | |
| TGAGCAACCTATTAGATTTG+TGG | - | tig0004591:14732-14751 | Msa1340900:intron | 35.0% | |
| !! | CAAAATGGGTTGATGAAAAG+TGG | - | tig0004591:14811-14830 | Msa1340900:intron | 35.0% |
| TGTATAACTGAGGTTAGATG+AGG | - | tig0004591:14881-14900 | Msa1340900:intron | 35.0% | |
| GTAGAGAGAATGAAGGAAAA+AGG | - | tig0004591:14921-14940 | Msa1340900:intron | 35.0% | |
| ! | TTTGGAGTTAGATGAGGTAT+TGG | - | tig0004591:15019-15038 | Msa1340900:intron | 35.0% |
| ! | TTGGAGTTAGATGAGGTATT+GGG | - | tig0004591:15020-15039 | Msa1340900:intron | 35.0% |
| GTAGAGAGAATGAAGGAAAA+AGG | - | tig0004591:14921-14940 | Msa1340900:intron | 35.0% | |
| !! | GATTTTGAGTCACAAAAGTG+TGG | - | tig0004591:15112-15131 | Msa1340900:intron | 35.0% |
| AAAAAAAGTTGTGGATGAGC+TGG | - | tig0004591:15159-15178 | Msa1340900:intron | 35.0% | |
| TATGGTTGCTGCTATATTGA+TGG | - | tig0004591:15224-15243 | Msa1340900:intron | 35.0% | |
| TGCTATATTGATGGAGGTTA+GGG | - | tig0004591:15233-15252 | Msa1340900:intron | 35.0% | |
| TTGCAAAAGAGGCTAAATGA+AGG | - | tig0004591:15453-15472 | Msa1340900:intron | 35.0% | |
| TGCAAAAGAGGCTAAATGAA+GGG | - | tig0004591:15454-15473 | Msa1340900:intron | 35.0% | |
| AGGTATACTCTACGAATCAA+CGG | - | tig0004591:15788-15807 | Msa1340900:intron | 35.0% | |
| TTAAAGTGAACTGTACTGTC+AGG | + | tig0004591:15857-15876 | Msa1340900:intergenic | 35.0% | |
| CCAATACATAACACAACTTG+CGG | - | tig0004591:16192-16211 | Msa1340900:intron | 35.0% | |
| GGGAGTTTGAATAATACCTT+TGG | - | tig0004591:16688-16707 | Msa1340900:intron | 35.0% | |
| GCGTTTACAAATCACTATGA+AGG | + | tig0004591:16790-16809 | Msa1340900:intergenic | 35.0% | |
| ! | CATAGTGATTTGTAAACGCT+TGG | - | tig0004591:16791-16810 | Msa1340900:intron | 35.0% |
| !! | CAGTTGGTAACAGATATATG+AGG | - | tig0004591:16814-16833 | Msa1340900:intron | 35.0% |
| ! | AGAAAAAATCGTCTGAGATC+TGG | - | tig0004591:16851-16870 | Msa1340900:intron | 35.0% |
| GAGTTTCAGGAGAATTACAT+TGG | + | tig0004591:16949-16968 | Msa1340900:intergenic | 35.0% | |
| CATTCTAATTGTGCTATGTG+AGG | - | tig0004591:16978-16997 | Msa1340900:intron | 35.0% | |
| ! | TTGAAAGTATAGATGGCATG+GGG | + | tig0004591:17136-17155 | Msa1340900:intergenic | 35.0% |
| ! | CTTGAAAGTATAGATGGCAT+GGG | + | tig0004591:17137-17156 | Msa1340900:intergenic | 35.0% |
| ! | ACTTGAAAGTATAGATGGCA+TGG | + | tig0004591:17138-17157 | Msa1340900:intergenic | 35.0% |
| TGTGGTCTGTACTACAAAAA+GGG | + | tig0004591:17192-17211 | Msa1340900:intergenic | 35.0% | |
| ATACATAGTTTACTGCTCTG+TGG | + | tig0004591:17210-17229 | Msa1340900:intergenic | 35.0% | |
| !! | CAACCAAGTTTTATCCATCT+AGG | - | tig0004591:17242-17261 | Msa1340900:intron | 35.0% |
| AATAGTGCATGTGCATGTTA+GGG | + | tig0004591:17302-17321 | Msa1340900:intergenic | 35.0% | |
| AAATAGTGCATGTGCATGTT+AGG | + | tig0004591:17303-17322 | Msa1340900:intergenic | 35.0% | |
| ! | ACAAAGTATTCCAAATTCCC+CGG | - | tig0004591:17440-17459 | Msa1340900:intron | 35.0% |
| CCTAAATTACGAATGTTAGG+GGG | + | tig0004591:17467-17486 | Msa1340900:intergenic | 35.0% | |
| TCCTTTCTTGAATGAGTCTT+AGG | - | tig0004591:17613-17632 | Msa1340900:intron | 35.0% | |
| TCCTAAGACTCATTCAAGAA+AGG | + | tig0004591:17617-17636 | Msa1340900:intergenic | 35.0% | |
| !! | TAGTCGAAAACTTGGTTTTC+TGG | - | tig0004591:17669-17688 | Msa1340900:intron | 35.0% |
| ATGTTTAATAGTGACTCAGG+TGG | - | tig0004591:18174-18193 | Msa1340900:CDS | 35.0% | |
| TGAAAACAGCACTCAAAAGA+TGG | + | tig0004591:18251-18270 | Msa1340900:intergenic | 35.0% | |
| !!! | TGCTGTTTTCATGATTGTAC+AGG | - | tig0004591:18260-18279 | Msa1340900:intron | 35.0% |
| ATACACAGACTCTGCAATTA+AGG | - | tig0004591:18424-18443 | Msa1340900:intron | 35.0% | |
| CTCTTTATCTGTATGTACAG+GGG | + | tig0004591:18709-18728 | Msa1340900:intergenic | 35.0% | |
| ATGTTGTTAGGACATATGAG+AGG | + | tig0004591:18841-18860 | Msa1340900:intergenic | 35.0% | |
| TTCTGACTATGCATGTTGTT+AGG | + | tig0004591:18853-18872 | Msa1340900:intergenic | 35.0% | |
| GGCATTATCAGGAAAATGAT+GGG | + | tig0004591:18888-18907 | Msa1340900:intergenic | 35.0% | |
| ! | GATATGAGTGTTGTAGTGTA+AGG | - | tig0004591:19085-19104 | Msa1340900:intron | 35.0% |
| ! | AAGAGAAGTCTTGTACCTAA+TGG | - | tig0004591:19139-19158 | Msa1340900:intron | 35.0% |
| AATGTGGAAATGCTACCTTT+AGG | + | tig0004591:19228-19247 | Msa1340900:intergenic | 35.0% | |
| CAATGGAAGTTTCTTCAATG+TGG | + | tig0004591:19244-19263 | Msa1340900:intergenic | 35.0% | |
| CACATTGAAGAAACTTCCAT+TGG | - | tig0004591:19242-19261 | Msa1340900:intron | 35.0% | |
| TCAATGCTTCTAATCTCCAA+TGG | + | tig0004591:19261-19280 | Msa1340900:intergenic | 35.0% | |
| AAGAATCCCAGGAATACAAT+AGG | + | tig0004591:19340-19359 | Msa1340900:intergenic | 35.0% | |
| AGAAAATAGCAAAGAATCCC+AGG | + | tig0004591:19351-19370 | Msa1340900:intergenic | 35.0% | |
| !!! | ATTAGTTTTTCTCCTTCGTC+CGG | - | tig0004591:19488-19507 | Msa1340900:intron | 35.0% |
| TGAACTAAGAGATAAGGAGT+TGG | + | tig0004591:19531-19550 | Msa1340900:intergenic | 35.0% | |
| ! | CTGGTTTGAACTAAGAGATA+AGG | + | tig0004591:19537-19556 | Msa1340900:intergenic | 35.0% |
| ! | AATACACACACAAAAGGTGT+TGG | + | tig0004591:19569-19588 | Msa1340900:intergenic | 35.0% |
| ACACTATCCAATTGTTACAC+TGG | - | tig0004591:19809-19828 | Msa1340900:intron | 35.0% | |
| CATTACACCAGTGTAACAAT+TGG | + | tig0004591:19819-19838 | Msa1340900:intergenic | 35.0% | |
| !!! | CCACTTTTGTTTTGTTTCGA+GGG | + | tig0004591:19989-20008 | Msa1340900:intergenic | 35.0% |
| CCTCGAAACAAAACAAAAGT+GGG | - | tig0004591:19987-20006 | Msa1340900:intron | 35.0% | |
| !!! | ACTAAATGTTTTGGGAGATG+AGG | + | tig0004591:20123-20142 | Msa1340900:intergenic | 35.0% |
| GAGCTTATATTGAGGAACAA+AGG | - | tig0004591:20245-20264 | Msa1340900:intron | 35.0% | |
| TAAAAACTAGGTTACCCTTG+AGG | + | tig0004591:20378-20397 | Msa1340900:intergenic | 35.0% | |
| !!! | GGGTAACCTAGTTTTTAGTT+CGG | - | tig0004591:20381-20400 | Msa1340900:intron | 35.0% |
| CTATAGCAAGGTTTCTCTTT+GGG | + | tig0004591:20412-20431 | Msa1340900:intergenic | 35.0% | |
| TCTATAGCAAGGTTTCTCTT+TGG | + | tig0004591:20413-20432 | Msa1340900:intergenic | 35.0% | |
| ACGTGAGATGGAATCTAAAT+AGG | - | tig0004591:20496-20515 | Msa1340900:intron | 35.0% | |
| GATGTATATGCTTCACCTTA+AGG | - | tig0004591:20590-20609 | Msa1340900:intron | 35.0% | |
| TGTATATGCTTCACCTTAAG+GGG | - | tig0004591:20592-20611 | Msa1340900:intron | 35.0% | |
| AGTAACTTAGAGACTAAGCT+AGG | - | tig0004591:21006-21025 | Msa1340900:intron | 35.0% | |
| GCTAAGTAACTTAGAGAGTA+AGG | - | tig0004591:21067-21086 | Msa1340900:intron | 35.0% | |
| TCTTTGTCTTGACAATCTTG+TGG | - | tig0004591:21195-21214 | Msa1340900:intron | 35.0% | |
| ! | CATTTTATTCATGGCAGACA+AGG | - | tig0004591:21263-21282 | Msa1340900:intron | 35.0% |
| !! | GCAATAGCCATTGATAATGA+AGG | + | tig0004591:21418-21437 | Msa1340900:intergenic | 35.0% |
| TAAAGTGCAAACCATTGGAA+AGG | + | tig0004591:21592-21611 | Msa1340900:intergenic | 35.0% | |
| GTTGCTCAAAATCCATTCAA+TGG | + | tig0004591:21703-21722 | Msa1340900:intergenic | 35.0% | |
| AGAAATATCCCAAGAAAGTG+AGG | - | tig0004591:21785-21804 | Msa1340900:intron | 35.0% | |
| AGGTGAATATGGCAAAAATG+TGG | + | tig0004591:21820-21839 | Msa1340900:intergenic | 35.0% | |
| !! | ATTGCTTTTCCGTGAAAAGA+TGG | + | tig0004591:21864-21883 | Msa1340900:intergenic | 35.0% |
| GAAACACCTAAACTCACTAA+TGG | - | tig0004591:22041-22060 | Msa1340900:intron | 35.0% | |
| !! | GATTGAACTTTCGAGTTAAC+TGG | + | tig0004591:22300-22319 | Msa1340900:intergenic | 35.0% |
| ACTCGAAAGTTCAATCTGAT+AGG | - | tig0004591:22304-22323 | Msa1340900:intron | 35.0% | |
| TTCAATCTGATAGGTGAAGA+AGG | - | tig0004591:22313-22332 | Msa1340900:intron | 35.0% | |
| !! | GTCCCATCATTTTAAAAACC+AGG | - | tig0004591:22371-22390 | Msa1340900:intron | 35.0% |
| AAATTGGACAGAATTGTGAG+AGG | - | tig0004591:22407-22426 | Msa1340900:intron | 35.0% | |
| GCATGCATGTCTAATATATC+TGG | - | tig0004591:22546-22565 | Msa1340900:intron | 35.0% | |
| ATTCAACATTGTTAAGGGGA+TGG | + | tig0004591:22618-22637 | Msa1340900:intergenic | 35.0% | |
| ACGGATTCAACATTGTTAAG+GGG | + | tig0004591:22622-22641 | Msa1340900:intergenic | 35.0% | |
| CTAACTTTACAAGCATCTAG+TGG | + | tig0004591:22832-22851 | Msa1340900:intergenic | 35.0% | |
| TGATACTGCTCATGTAAGAT+GGG | - | tig0004591:23020-23039 | Msa1340900:intron | 35.0% | |
| TGTAGCTGTAATGAACTCAT+GGG | + | tig0004591:23121-23140 | Msa1340900:intergenic | 35.0% | |
| TAACAGATTGGTGGAAGATT+GGG | - | tig0004591:23228-23247 | Msa1340900:intron | 35.0% | |
| CTGACAATCAATAAAAGCCT+TGG | + | tig0004591:23286-23305 | Msa1340900:intergenic | 35.0% | |
| TTGATTGTCAGCATGATTCT+CGG | - | tig0004591:23295-23314 | Msa1340900:intron | 35.0% | |
| TTCTCGGGTCAGTTTAAATT+TGG | - | tig0004591:23311-23330 | Msa1340900:intron | 35.0% | |
| ATATCCCTTGCTTTGCATTT+AGG | - | tig0004591:23389-23408 | Msa1340900:intron | 35.0% | |
| ! | TCTCAACCTCTTTTCTACAA+AGG | - | tig0004591:23735-23754 | Msa1340900:CDS | 35.0% |
| CGTTTGACCTATCATGACTA+GGG | - | tig0004591:12365-12384 | Msa1340900:CDS | 40.0% | |
| GATACATCCCTAGTCATGAT+AGG | + | tig0004591:12375-12394 | Msa1340900:intergenic | 40.0% | |
| GATGTTACCAGATCTTATCG+TGG | - | tig0004591:12692-12711 | Msa1340900:CDS | 40.0% | |
| TTACCAGATCTTATCGTGGA+TGG | - | tig0004591:12696-12715 | Msa1340900:CDS | 40.0% | |
| TACCAGATCTTATCGTGGAT+GGG | - | tig0004591:12697-12716 | Msa1340900:CDS | 40.0% | |
| AACATCAATGGGATTCCTGA+AGG | - | tig0004591:12895-12914 | Msa1340900:CDS | 40.0% | |
| TTCCTGTAACTTTGGTAGGA+TGG | - | tig0004591:12955-12974 | Msa1340900:CDS | 40.0% | |
| ! | CTGTCACATGATCTCTAAGA+TGG | + | tig0004591:13011-13030 | Msa1340900:intergenic | 40.0% |
| CATCTTAGAGATCATGTGAC+AGG | - | tig0004591:13009-13028 | Msa1340900:intron | 40.0% | |
| !! | ACTCTGCTAATGGCTTTGAT+GGG | - | tig0004591:13257-13276 | Msa1340900:intron | 40.0% |
| AGATGGTGCTTAAGTCAGAT+TGG | + | tig0004591:13475-13494 | Msa1340900:intergenic | 40.0% | |
| ! | GACTCTTAAATGGGTGCTTT+TGG | + | tig0004591:13503-13522 | Msa1340900:intergenic | 40.0% |
| ! | TCAGTCAGCTGCTGATTATT+CGG | - | tig0004591:13686-13705 | Msa1340900:intron | 40.0% |
| CTAAGCAAGCCAATTACAGT+AGG | - | tig0004591:13801-13820 | Msa1340900:intron | 40.0% | |
| AGTCTTCTCCCTACTGTAAT+TGG | + | tig0004591:13813-13832 | Msa1340900:intergenic | 40.0% | |
| ! | GGAGTGTTTGACTTCCAAAT+AGG | + | tig0004591:14231-14250 | Msa1340900:intergenic | 40.0% |
| GAAAATCCCTTTCACTATGG+AGG | - | tig0004591:14333-14352 | Msa1340900:intron | 40.0% | |
| TAGAGGACTTGAAATTGGCA+TGG | + | tig0004591:14476-14495 | Msa1340900:intergenic | 40.0% | |
| TGCGATAGAGGACTTGAAAT+TGG | + | tig0004591:14481-14500 | Msa1340900:intergenic | 40.0% | |
| ! | AAGGTGAGTTGACTCACAAA+TGG | + | tig0004591:14547-14566 | Msa1340900:intergenic | 40.0% |
| AAAGTGCAGAGATCAAAGGA+GGG | + | tig0004591:14572-14591 | Msa1340900:intergenic | 40.0% | |
| AGTCAAAGTGCAGAGATCAA+AGG | + | tig0004591:14576-14595 | Msa1340900:intergenic | 40.0% | |
| ! | TCAGAGTCACTTTCTGTTTC+TGG | - | tig0004591:14649-14668 | Msa1340900:intron | 40.0% |
| TTTGAAAGCAGAGCTGTGTT+GGG | - | tig0004591:14766-14785 | Msa1340900:intron | 40.0% | |
| ACTGAGGTTAGATGAGGTAT+TGG | - | tig0004591:14887-14906 | Msa1340900:intron | 40.0% | |
| ! | CTGAGGTTAGATGAGGTATT+GGG | - | tig0004591:14888-14907 | Msa1340900:intron | 40.0% |
| !! | TCAGTTGGTAGAGAGAATGA+AGG | - | tig0004591:14914-14933 | Msa1340900:intron | 40.0% |
| GAGAATGAAGGAAAAAGGGT+TGG | - | tig0004591:14926-14945 | Msa1340900:intron | 40.0% | |
| AATGAAGGAAAAAGGGTTGG+TGG | - | tig0004591:14929-14948 | Msa1340900:intron | 40.0% | |
| !! | GTTTTGAGTCACAAAAGCGT+GGG | - | tig0004591:14981-15000 | Msa1340900:intron | 40.0% |
| ! | GAGTCATTTGGAGTTAGATG+AGG | - | tig0004591:15013-15032 | Msa1340900:intron | 40.0% |
| !! | TCAGTTGGTAGAGAGAATGA+AGG | - | tig0004591:14914-14933 | Msa1340900:intron | 40.0% |
| GAGAATGAAGGAAAAAGGGT+TGG | - | tig0004591:14926-14945 | Msa1340900:intron | 40.0% | |
| AATGAAGGAAAAAGGGTTGG+TGG | - | tig0004591:14929-14948 | Msa1340900:intron | 40.0% | |
| GTAGTGAAAGGGGATGAAAT+TGG | - | tig0004591:15189-15208 | Msa1340900:intron | 40.0% | |
| AATTGGAGAGTTGTGGCTTA+TGG | - | tig0004591:15206-15225 | Msa1340900:intron | 40.0% | |
| CTGCTATATTGATGGAGGTT+AGG | - | tig0004591:15232-15251 | Msa1340900:intron | 40.0% | |
| AAAAGAGGCTAAATGAAGGG+AGG | - | tig0004591:15457-15476 | Msa1340900:intron | 40.0% | |
| AAAGAGGCTAAATGAAGGGA+GGG | - | tig0004591:15458-15477 | Msa1340900:intron | 40.0% | |
| !! | TTATAGAGGGTACTGTCACA+GGG | + | tig0004591:15911-15930 | Msa1340900:intergenic | 40.0% |
| ! | ATCTTTTCCGTTCATCAGCA+GGG | - | tig0004591:16048-16067 | Msa1340900:intron | 40.0% |
| CCGCAAGTTGTGTTATGTAT+TGG | + | tig0004591:16195-16214 | Msa1340900:intergenic | 40.0% | |
| ATTTGTAAACGCTTGGCAGT+TGG | - | tig0004591:16798-16817 | Msa1340900:intron | 40.0% | |
| CACAATTAGAATGAATCGCG+AGG | + | tig0004591:16971-16990 | Msa1340900:intergenic | 40.0% | |
| TAATTGTGCTATGTGAGGCA+TGG | - | tig0004591:16983-17002 | Msa1340900:intron | 40.0% | |
| ACAGTCCATTAATTAGGTGG+TGG | - | tig0004591:17097-17116 | Msa1340900:intron | 40.0% | |
| AACAGCCACCACCTAATTAA+TGG | + | tig0004591:17105-17124 | Msa1340900:intergenic | 40.0% | |
| CTGTGGTCTGTACTACAAAA+AGG | + | tig0004591:17193-17212 | Msa1340900:intergenic | 40.0% | |
| CCACCTAGATGGATAAAACT+TGG | + | tig0004591:17248-17267 | Msa1340900:intergenic | 40.0% | |
| !! | CCAAGTTTTATCCATCTAGG+TGG | - | tig0004591:17245-17264 | Msa1340900:intron | 40.0% |
| TTATCCATCTAGGTGGTGTA+AGG | - | tig0004591:17252-17271 | Msa1340900:intron | 40.0% | |
| TATCCATCTAGGTGGTGTAA+GGG | - | tig0004591:17253-17272 | Msa1340900:intron | 40.0% | |
| GAAAGAGACGCATCAATGAA+TGG | + | tig0004591:17353-17372 | Msa1340900:intergenic | 40.0% | |
| TCATTGATGCGTCTCTTTCT+TGG | - | tig0004591:17354-17373 | Msa1340900:intron | 40.0% | |
| CCCCCTAACATTCGTAATTT+AGG | - | tig0004591:17464-17483 | Msa1340900:intron | 40.0% | |
| ! | AACCAAGTTTTCGACTACCT+GGG | + | tig0004591:17666-17685 | Msa1340900:intergenic | 40.0% |
| ! | AAACCAAGTTTTCGACTACC+TGG | + | tig0004591:17667-17686 | Msa1340900:intergenic | 40.0% |
| ! | TCAGAATCGGAGTTCTTTTC+TGG | - | tig0004591:17843-17862 | Msa1340900:intron | 40.0% |
| TTTAATAGTGACTCAGGTGG+TGG | - | tig0004591:18177-18196 | Msa1340900:CDS | 40.0% | |
| GTATGTACAGGGGAATTCTT+AGG | + | tig0004591:18699-18718 | Msa1340900:intergenic | 40.0% | |
| CGGCATTATCAGGAAAATGA+TGG | + | tig0004591:18889-18908 | Msa1340900:intergenic | 40.0% | |
| CAACTTTACTCGGCATTATC+AGG | + | tig0004591:18899-18918 | Msa1340900:intergenic | 40.0% | |
| CTCTTGGACACTAGAAATTG+TGG | - | tig0004591:19063-19082 | Msa1340900:intron | 40.0% | |
| AGGAAGAAAAAGGTCAGACA+TGG | - | tig0004591:19105-19124 | Msa1340900:intron | 40.0% | |
| AATAATACGGGAGGACCATT+AGG | + | tig0004591:19157-19176 | Msa1340900:intergenic | 40.0% | |
| CACACACACACATATAGATG+AGG | + | tig0004591:19422-19441 | Msa1340900:intergenic | 40.0% | |
| !! | TTAGTTTTTCTCCTTCGTCC+GGG | - | tig0004591:19489-19508 | Msa1340900:intron | 40.0% |
| ACTAAGAGATAAGGAGTTGG+AGG | + | tig0004591:19528-19547 | Msa1340900:intergenic | 40.0% | |
| CCCTCGAAACAAAACAAAAG+TGG | - | tig0004591:19986-20005 | Msa1340900:intron | 40.0% | |
| !!! | CCCACTTTTGTTTTGTTTCG+AGG | + | tig0004591:19990-20009 | Msa1340900:intergenic | 40.0% |
| CCTTGAGGACACAAAGAATA+GGG | + | tig0004591:20363-20382 | Msa1340900:intergenic | 40.0% | |
| CCTATTCTTTGTGTCCTCAA+GGG | - | tig0004591:20361-20380 | Msa1340900:intron | 40.0% | |
| GCATCACCGAACTAAAAACT+AGG | + | tig0004591:20390-20409 | Msa1340900:intergenic | 40.0% | |
| TTAACCTGATCAATCCCTAC+CGG | + | tig0004591:20716-20735 | Msa1340900:intergenic | 40.0% | |
| ACATGAATCAAAATGCTCCC+TGG | - | tig0004591:21163-21182 | Msa1340900:intron | 40.0% | |
| AATGGCTATTGCCCAAGAAA+GGG | - | tig0004591:21426-21445 | Msa1340900:intron | 40.0% | |
| GCTGATAAAGTGCAAACCAT+TGG | + | tig0004591:21597-21616 | Msa1340900:intergenic | 40.0% | |
| ! | TGGATTTTGAGCAACTGTGA+TGG | - | tig0004591:21708-21727 | Msa1340900:intron | 40.0% |
| ACCATGAACCTCACTTTCTT+GGG | + | tig0004591:21796-21815 | Msa1340900:intergenic | 40.0% | |
| TACCATGAACCTCACTTTCT+TGG | + | tig0004591:21797-21816 | Msa1340900:intergenic | 40.0% | |
| ACCTCAAAAGAATGTTGCCA+AGG | - | tig0004591:21836-21855 | Msa1340900:intron | 40.0% | |
| CCTCAAAAGAATGTTGCCAA+GGG | - | tig0004591:21837-21856 | Msa1340900:intron | 40.0% | |
| ! | AGTTTAGGTGTTTCTGTGAG+AGG | + | tig0004591:22035-22054 | Msa1340900:intergenic | 40.0% |
| CTTAAGGGAACAGAAAGTAG+TGG | + | tig0004591:22471-22490 | Msa1340900:intergenic | 40.0% | |
| GCAAACCACTCAAGTCTTAA+GGG | + | tig0004591:22486-22505 | Msa1340900:intergenic | 40.0% | |
| TTACTACAGCTGAAGTCATG+TGG | + | tig0004591:22508-22527 | Msa1340900:intergenic | 40.0% | |
| !! | TTGAGAGGAGTATCACCATA+CGG | + | tig0004591:22641-22660 | Msa1340900:intergenic | 40.0% |
| !!! | TTTCTGTTTTAGAGGCTGCT+AGG | - | tig0004591:22700-22719 | Msa1340900:intron | 40.0% |
| !! | ATCTAGTGGACTCCATATCA+TGG | + | tig0004591:22818-22837 | Msa1340900:intergenic | 40.0% |
| GCAATACATCAGCTCTGTTT+AGG | + | tig0004591:22969-22988 | Msa1340900:intergenic | 40.0% | |
| GTGATACTGCTCATGTAAGA+TGG | - | tig0004591:23019-23038 | Msa1340900:intron | 40.0% | |
| CTGTAGCTGTAATGAACTCA+TGG | + | tig0004591:23122-23141 | Msa1340900:intergenic | 40.0% | |
| CTAACAGATTGGTGGAAGAT+TGG | - | tig0004591:23227-23246 | Msa1340900:intron | 40.0% | |
| TGATTGTCAGCATGATTCTC+GGG | - | tig0004591:23296-23315 | Msa1340900:intron | 40.0% | |
| GACACCTAAATGCAAAGCAA+GGG | + | tig0004591:23396-23415 | Msa1340900:intergenic | 40.0% | |
| TGACACCTAAATGCAAAGCA+AGG | + | tig0004591:23397-23416 | Msa1340900:intergenic | 40.0% | |
| CATTGGATGCATTGTCTTCT+GGG | - | tig0004591:23502-23521 | Msa1340900:intron | 40.0% | |
| ATTGGATGCATTGTCTTCTG+GGG | - | tig0004591:23503-23522 | Msa1340900:intron | 40.0% | |
| CATTGTTAGTCGCCAAATCA+TGG | + | tig0004591:23566-23585 | Msa1340900:intergenic | 40.0% | |
| TGGTTTCTTAGATTCATCGG+TGG | + | tig0004591:23652-23671 | Msa1340900:intergenic | 40.0% | |
| CCAACACCTTTGTAGAAAAG+AGG | + | tig0004591:23744-23763 | Msa1340900:intergenic | 40.0% | |
| !! | CCTCTTTTCTACAAAGGTGT+TGG | - | tig0004591:23741-23760 | Msa1340900:CDS | 40.0% |
| GCGTTTGACCTATCATGACT+AGG | - | tig0004591:12364-12383 | Msa1340900:CDS | 45.0% | |
| TACCCATCCACGATAAGATC+TGG | + | tig0004591:12702-12721 | Msa1340900:intergenic | 45.0% | |
| CTAGGTAAGTTCGACACTGT+AGG | + | tig0004591:12837-12856 | Msa1340900:intergenic | 45.0% | |
| CTCCATCCTACCAAAGTTAC+AGG | + | tig0004591:12960-12979 | Msa1340900:intergenic | 45.0% | |
| GGAAGTCTACACTCTGCTAA+TGG | - | tig0004591:13247-13266 | Msa1340900:intron | 45.0% | |
| !! | CACTCTGCTAATGGCTTTGA+TGG | - | tig0004591:13256-13275 | Msa1340900:intron | 45.0% |
| CTGACTGAACCAGATTCATG+TGG | + | tig0004591:13674-13693 | Msa1340900:intergenic | 45.0% | |
| ! | CAGTCAGCTGCTGATTATTC+GGG | - | tig0004591:13687-13706 | Msa1340900:intron | 45.0% |
| ATCCCTTTCACTATGGAGGA+CGG | - | tig0004591:14337-14356 | Msa1340900:intron | 45.0% | |
| AACCGTCCTCCATAGTGAAA+GGG | + | tig0004591:14342-14361 | Msa1340900:intergenic | 45.0% | |
| CCATTATCCGATGGTAGAAC+CGG | + | tig0004591:14431-14450 | Msa1340900:intergenic | 45.0% | |
| ACTTGAAATTGGCATGGACG+GGG | + | tig0004591:14470-14489 | Msa1340900:intergenic | 45.0% | |
| GACTTGAAATTGGCATGGAC+GGG | + | tig0004591:14471-14490 | Msa1340900:intergenic | 45.0% | |
| GGACTTGAAATTGGCATGGA+CGG | + | tig0004591:14472-14491 | Msa1340900:intergenic | 45.0% | |
| GAGAATCGAATCTGCGATAG+AGG | + | tig0004591:14493-14512 | Msa1340900:intergenic | 45.0% | |
| ACTTTGAACTCGTGAGGACT+GGG | + | tig0004591:14518-14537 | Msa1340900:intergenic | 45.0% | |
| AACTTTGAACTCGTGAGGAC+TGG | + | tig0004591:14519-14538 | Msa1340900:intergenic | 45.0% | |
| CAAAGTGCAGAGATCAAAGG+AGG | + | tig0004591:14573-14592 | Msa1340900:intergenic | 45.0% | |
| GTTTGAAAGCAGAGCTGTGT+TGG | - | tig0004591:14765-14784 | Msa1340900:intron | 45.0% | |
| !! | AGGTTAGATGAGGTATTGGG+TGG | - | tig0004591:14891-14910 | Msa1340900:intron | 45.0% |
| !!! | GGTTTTGAGTCACAAAAGCG+TGG | - | tig0004591:14980-14999 | Msa1340900:intron | 45.0% |
| ! | GGGTGGGTTTATGAGTCATT+TGG | - | tig0004591:15001-15020 | Msa1340900:intron | 45.0% |
| !! | GAGTTAGATGAGGTATTGGG+TGG | - | tig0004591:15023-15042 | Msa1340900:intron | 45.0% |
| ! | TTGAGTCACAAAAGTGTGGG+TGG | - | tig0004591:15116-15135 | Msa1340900:intron | 45.0% |
| ! | TGAGTCACAAAAGTGTGGGT+GGG | - | tig0004591:15117-15136 | Msa1340900:intron | 45.0% |
| ! | GGGTGGGTTTATGAGTCATT+TGG | - | tig0004591:15001-15020 | Msa1340900:intron | 45.0% |
| CTGGTGAACGTGTAGTGAAA+GGG | - | tig0004591:15178-15197 | Msa1340900:intron | 45.0% | |
| TGGTGAACGTGTAGTGAAAG+GGG | - | tig0004591:15179-15198 | Msa1340900:intron | 45.0% | |
| GGGATGAAATTGGAGAGTTG+TGG | - | tig0004591:15199-15218 | Msa1340900:intron | 45.0% | |
| GGTTGCTGCTATATTGATGG+AGG | - | tig0004591:15227-15246 | Msa1340900:intron | 45.0% | |
| TATTGATGGAGGTTAGGGAG+AGG | - | tig0004591:15238-15257 | Msa1340900:intron | 45.0% | |
| ATTGATGGAGGTTAGGGAGA+GGG | - | tig0004591:15239-15258 | Msa1340900:intron | 45.0% | |
| TTGAGAGAGAGGAAAGGAGA+TGG | - | tig0004591:15262-15281 | Msa1340900:intron | 45.0% | |
| AAGAGGCTAAATGAAGGGAG+GGG | - | tig0004591:15459-15478 | Msa1340900:intron | 45.0% | |
| !! | AAAGGTCTTAAAGAGTGCCC+CGG | - | tig0004591:15668-15687 | Msa1340900:intron | 45.0% |
| AAATGTTAACGAGTTCCCCC+GGG | + | tig0004591:15689-15708 | Msa1340900:intergenic | 45.0% | |
| GAAATGTTAACGAGTTCCCC+CGG | + | tig0004591:15690-15709 | Msa1340900:intergenic | 45.0% | |
| ! | CAAACTCTAGTCGAGAGTGT+AGG | + | tig0004591:15830-15849 | Msa1340900:intergenic | 45.0% |
| !! | GTTATAGAGGGTACTGTCAC+AGG | + | tig0004591:15912-15931 | Msa1340900:intergenic | 45.0% |
| ! | CATCTTTTCCGTTCATCAGC+AGG | - | tig0004591:16047-16066 | Msa1340900:intron | 45.0% |
| CACATCTGATTCTGCAGCAT+CGG | - | tig0004591:16102-16121 | Msa1340900:intron | 45.0% | |
| GAGAAACGAAGCAGCAATTG+AGG | + | tig0004591:16618-16637 | Msa1340900:intergenic | 45.0% | |
| AATGAATCGCGAGGAGTTTC+AGG | + | tig0004591:16962-16981 | Msa1340900:intergenic | 45.0% | |
| GGCATGGAATCTGAAAACCT+TGG | - | tig0004591:16999-17018 | Msa1340900:intron | 45.0% | |
| GGAATCTGAAAACCTTGGAG+TGG | - | tig0004591:17004-17023 | Msa1340900:intron | 45.0% | |
| GTACTACAAAAAGGGCTTCG+AGG | + | tig0004591:17184-17203 | Msa1340900:intergenic | 45.0% | |
| TATCCCTTACACCACCTAGA+TGG | + | tig0004591:17259-17278 | Msa1340900:intergenic | 45.0% | |
| TTGATGCGTCTCTTTCTTGG+AGG | - | tig0004591:17357-17376 | Msa1340900:intron | 45.0% | |
| TGATGCGTCTCTTTCTTGGA+GGG | - | tig0004591:17358-17377 | Msa1340900:intron | 45.0% | |
| !! | TTGGAGGGAATTTGTTGACC+TGG | - | tig0004591:17373-17392 | Msa1340900:intron | 45.0% |
| ATTACGAATGTTAGGGGGAC+CGG | + | tig0004591:17462-17481 | Msa1340900:intergenic | 45.0% | |
| ! | ACCAAGTTTTCGACTACCTG+GGG | + | tig0004591:17665-17684 | Msa1340900:intergenic | 45.0% |
| CTAAACTTCCCTCTGTTCTG+AGG | - | tig0004591:17733-17752 | Msa1340900:CDS | 45.0% | |
| CGATAGATCCTCAGAACAGA+GGG | + | tig0004591:17744-17763 | Msa1340900:intergenic | 45.0% | |
| TCGATAGATCCTCAGAACAG+AGG | + | tig0004591:17745-17764 | Msa1340900:intergenic | 45.0% | |
| AACTGGAAGCAACTCAGCAA+CGG | + | tig0004591:17808-17827 | Msa1340900:intergenic | 45.0% | |
| TGAGTTGTGTCGGAGCTTTA+GGG | + | tig0004591:18621-18640 | Msa1340900:intergenic | 45.0% | |
| GATTCCTCTCTGAGTTGTGT+CGG | + | tig0004591:18631-18650 | Msa1340900:intergenic | 45.0% | |
| ! | TTTTCTGTTAGGGCCAGAGT+AGG | + | tig0004591:18653-18672 | Msa1340900:intergenic | 45.0% |
| GATAAGGAGTTGGAGGACTT+GGG | + | tig0004591:19521-19540 | Msa1340900:intergenic | 45.0% | |
| AGATAAGGAGTTGGAGGACT+TGG | + | tig0004591:19522-19541 | Msa1340900:intergenic | 45.0% | |
| !! | AAGGTGTTGGATAGCTCAAC+TGG | + | tig0004591:19556-19575 | Msa1340900:intergenic | 45.0% |
| CCCTATTCTTTGTGTCCTCA+AGG | - | tig0004591:20360-20379 | Msa1340900:intron | 45.0% | |
| CCCTTGAGGACACAAAGAAT+AGG | + | tig0004591:20364-20383 | Msa1340900:intergenic | 45.0% | |
| ! | TGATCAATCCCTACCGGTTA+AGG | + | tig0004591:20710-20729 | Msa1340900:intergenic | 45.0% |
| TTAACCGGTAGGGATTGATC+AGG | - | tig0004591:20709-20728 | Msa1340900:intron | 45.0% | |
| TGTGCGTCTGAATAGCACTA+CGG | - | tig0004591:20961-20980 | Msa1340900:intron | 45.0% | |
| TCCACGAATTCTGCAATCAC+AGG | - | tig0004591:21292-21311 | Msa1340900:intron | 45.0% | |
| TCCTGTGATTGCAGAATTCG+TGG | + | tig0004591:21296-21315 | Msa1340900:intergenic | 45.0% | |
| CAATGGCTATTGCCCAAGAA+AGG | - | tig0004591:21425-21444 | Msa1340900:intron | 45.0% | |
| CCAATACATAGAGTCTCCCT+AGG | + | tig0004591:21505-21524 | Msa1340900:intergenic | 45.0% | |
| CCTAGGGAGACTCTATGTAT+TGG | - | tig0004591:21502-21521 | Msa1340900:intron | 45.0% | |
| GATTGCAGGCACATTTAGTG+CGG | - | tig0004591:21658-21677 | Msa1340900:intron | 45.0% | |
| ATTGCAGGCACATTTAGTGC+GGG | - | tig0004591:21659-21678 | Msa1340900:intron | 45.0% | |
| ! | TTGGGATATTTCTGCAGCTG+CGG | + | tig0004591:21778-21797 | Msa1340900:intergenic | 45.0% |
| TCCCAAGAAAGTGAGGTTCA+TGG | - | tig0004591:21792-21811 | Msa1340900:intron | 45.0% | |
| ! | CCCTTGGCAACATTCTTTTG+AGG | + | tig0004591:21840-21859 | Msa1340900:intergenic | 45.0% |
| CTGTTCCCTTAAGACTTGAG+TGG | - | tig0004591:22478-22497 | Msa1340900:intron | 45.0% | |
| GGCAAACCACTCAAGTCTTA+AGG | + | tig0004591:22487-22506 | Msa1340900:intergenic | 45.0% | |
| TGGGGGTTAAGACCATGATA+TGG | - | tig0004591:22803-22822 | Msa1340900:intron | 45.0% | |
| TGTAAGATGGGCAAAGCTTC+TGG | - | tig0004591:23032-23051 | Msa1340900:intron | 45.0% | |
| GTAAGATGGGCAAAGCTTCT+GGG | - | tig0004591:23033-23052 | Msa1340900:intron | 45.0% | |
| TAAGATGGGCAAAGCTTCTG+GGG | - | tig0004591:23034-23053 | Msa1340900:intron | 45.0% | |
| AACTCCTGCAGTTTCAACCT+AGG | + | tig0004591:23078-23097 | Msa1340900:intergenic | 45.0% | |
| AATTATGGCAGTGCTTGACC+AGG | - | tig0004591:23419-23438 | Msa1340900:intron | 45.0% | |
| AGTGCTTGACCAGGAAACAA+GGG | - | tig0004591:23428-23447 | Msa1340900:intron | 45.0% | |
| CCAGAAGACAATGCATCCAA+TGG | + | tig0004591:23504-23523 | Msa1340900:intergenic | 45.0% | |
| CCATTGGATGCATTGTCTTC+TGG | - | tig0004591:23501-23520 | Msa1340900:intron | 45.0% | |
| TGGCGACTAACAATGATGCT+CGG | - | tig0004591:23571-23590 | Msa1340900:intron | 45.0% | |
| !! | ATATATAAATTTATAAGAAT+AGG | - | tig0004591:13623-13642 | Msa1340900:intron | 5.0% |
| !! | TTTAATATTATTTGTATATT+AGG | - | tig0004591:15736-15755 | Msa1340900:intron | 5.0% |
| !! | TATTAAAAAAATAAAAAAAG+TGG | - | tig0004591:19957-19976 | Msa1340900:intron | 5.0% |
| !! | ATTAAAAAAATAAAAAAAGT+GGG | - | tig0004591:19958-19977 | Msa1340900:intron | 5.0% |
| GTTGCATCTGCAGATTGTGC+TGG | - | tig0004591:12199-12218 | Msa1340900:CDS | 50.0% | |
| TTTCGGGCTTGCATTGCACT+TGG | - | tig0004591:13291-13310 | Msa1340900:intron | 50.0% | |
| !!! | GGGTGCTTTTGGCTTCTAGA+TGG | + | tig0004591:13492-13511 | Msa1340900:intergenic | 50.0% |
| ! | CAGCTGCTGATTATTCGGGT+TGG | - | tig0004591:13691-13710 | Msa1340900:intron | 50.0% |
| TCTTTGCCCTGTGCAGTATC+AGG | + | tig0004591:14287-14306 | Msa1340900:intergenic | 50.0% | |
| GAACCGTCCTCCATAGTGAA+AGG | + | tig0004591:14343-14362 | Msa1340900:intergenic | 50.0% | |
| TATGGAGGACGGTTCTACCA+TGG | - | tig0004591:14348-14367 | Msa1340900:intron | 50.0% | |
| GAACCGCACCCATTCACTTA+CGG | - | tig0004591:14402-14421 | Msa1340900:intron | 50.0% | |
| CCGGTTCTACCATCGGATAA+TGG | - | tig0004591:14428-14447 | Msa1340900:intron | 50.0% | |
| ATGGAGGCTCCATTATCCGA+TGG | + | tig0004591:14440-14459 | Msa1340900:intergenic | 50.0% | |
| !! | ATCGGATAATGGAGCCTCCA+TGG | - | tig0004591:14439-14458 | Msa1340900:intron | 50.0% |
| CAGAGATCAAAGGAGGGAGA+AGG | + | tig0004591:14566-14585 | Msa1340900:intergenic | 50.0% | |
| AAAGCAGAGCTGTGTTGGGA+AGG | - | tig0004591:14770-14789 | Msa1340900:intron | 50.0% | |
| AAGCAGAGCTGTGTTGGGAA+GGG | - | tig0004591:14771-14790 | Msa1340900:intron | 50.0% | |
| !! | TGAGGTATTGGGTGGTCAGT+TGG | - | tig0004591:14899-14918 | Msa1340900:intron | 50.0% |
| !! | GAAGGAAAAAGGGTTGGTGG+TGG | - | tig0004591:14932-14951 | Msa1340900:intron | 50.0% |
| !! | AAAAGGGTTGGTGGTGGTTG+AGG | - | tig0004591:14938-14957 | Msa1340900:intron | 50.0% |
| !! | GTTGGTGGTGGTTGAGGAAT+GGG | - | tig0004591:14944-14963 | Msa1340900:intron | 50.0% |
| GGAATGGGTGGATCAAAGTG+AGG | - | tig0004591:14959-14978 | Msa1340900:intron | 50.0% | |
| ! | TTGAGTCACAAAAGCGTGGG+TGG | - | tig0004591:14984-15003 | Msa1340900:intron | 50.0% |
| ! | TGAGTCACAAAAGCGTGGGT+GGG | - | tig0004591:14985-15004 | Msa1340900:intron | 50.0% |
| !! | TGAGGTATTGGGTGGTCAGT+TGG | - | tig0004591:14899-14918 | Msa1340900:intron | 50.0% |
| !! | GAAGGAAAAAGGGTTGGTGG+TGG | - | tig0004591:14932-14951 | Msa1340900:intron | 50.0% |
| !! | AAAAGGGTTGGTGGTGGTTG+AGG | - | tig0004591:14938-14957 | Msa1340900:intron | 50.0% |
| !! | GTTGGTGGTGGTTGAGGAAT+GGG | - | tig0004591:14944-14963 | Msa1340900:intron | 50.0% |
| GCTGGTGAACGTGTAGTGAA+AGG | - | tig0004591:15177-15196 | Msa1340900:intron | 50.0% | |
| AGAGGGTTGAGAGAGAGGAA+AGG | - | tig0004591:15256-15275 | Msa1340900:intron | 50.0% | |
| GAGAGGAAAGGAGATGGTGA+AGG | - | tig0004591:15268-15287 | Msa1340900:intron | 50.0% | |
| AGAGGCTAAATGAAGGGAGG+GGG | - | tig0004591:15460-15479 | Msa1340900:intron | 50.0% | |
| !! | AAGGTCTTAAAGAGTGCCCC+GGG | - | tig0004591:15669-15688 | Msa1340900:intron | 50.0% |
| AATGTTAACGAGTTCCCCCG+GGG | + | tig0004591:15688-15707 | Msa1340900:intergenic | 50.0% | |
| AGAGCTTCCCTGCTGATGAA+CGG | + | tig0004591:16058-16077 | Msa1340900:intergenic | 50.0% | |
| TGTTGCCAAGACTACCTCTG+CGG | + | tig0004591:17035-17054 | Msa1340900:intergenic | 50.0% | |
| TTACGAATGTTAGGGGGACC+GGG | + | tig0004591:17461-17480 | Msa1340900:intergenic | 50.0% | |
| TCCCCAGGTAGTCGAAAACT+TGG | - | tig0004591:17661-17680 | Msa1340900:intron | 50.0% | |
| GAAGCTCGAGCAGCAATAAC+TGG | + | tig0004591:17825-17844 | Msa1340900:intergenic | 50.0% | |
| TGCTGCTCGAGCTTCAGAAT+CGG | - | tig0004591:17830-17849 | Msa1340900:intron | 50.0% | |
| ! | TTCTGGAGACAGAGCTGTAG+AGG | - | tig0004591:17860-17879 | Msa1340900:intron | 50.0% |
| TCTGTGCATCTCAGCAATGC+CGG | + | tig0004591:18392-18411 | Msa1340900:intergenic | 50.0% | |
| CTGAGTTGTGTCGGAGCTTT+AGG | + | tig0004591:18622-18641 | Msa1340900:intergenic | 50.0% | |
| CTCAGAGAGGAATCCTACTC+TGG | - | tig0004591:18637-18656 | Msa1340900:intron | 50.0% | |
| ! | CTTCACCTTAAGGGGCATGT+CGG | - | tig0004591:20600-20619 | Msa1340900:intron | 50.0% |
| ! | TTCACCTTAAGGGGCATGTC+GGG | - | tig0004591:20601-20620 | Msa1340900:intron | 50.0% |
| ATATCCCGACATGCCCCTTA+AGG | + | tig0004591:20608-20627 | Msa1340900:intergenic | 50.0% | |
| ! | GCCAAGGGTCCATCTTTTCA+CGG | - | tig0004591:21852-21871 | Msa1340900:intron | 50.0% |
| TCCGTGAAAAGATGGACCCT+TGG | + | tig0004591:21856-21875 | Msa1340900:intergenic | 50.0% | |
| ACCTAGGATGGAGAGTAGCA+CGG | + | tig0004591:23062-23081 | Msa1340900:intergenic | 50.0% | |
| CCTGCAGTTTCAACCTAGGA+TGG | + | tig0004591:23074-23093 | Msa1340900:intergenic | 50.0% | |
| ! | CCATCCTAGGTTGAAACTGC+AGG | - | tig0004591:23071-23090 | Msa1340900:intron | 50.0% |
| AGATTGGGATACAGCATCCG+TGG | - | tig0004591:23243-23262 | Msa1340900:intron | 50.0% | |
| GATTGGGATACAGCATCCGT+GGG | - | tig0004591:23244-23263 | Msa1340900:intron | 50.0% | |
| CCTGTGAATGCAGTATCCCA+CGG | + | tig0004591:23263-23282 | Msa1340900:intergenic | 50.0% | |
| GATACTGCATTCACAGGCCA+AGG | - | tig0004591:23266-23285 | Msa1340900:intron | 50.0% | |
| CAGTGCTTGACCAGGAAACA+AGG | - | tig0004591:23427-23446 | Msa1340900:intron | 50.0% | |
| ! | CTATCTCCACCCTTGTTTCC+TGG | + | tig0004591:23440-23459 | Msa1340900:intergenic | 50.0% |
| ! | TTGTCTTCTGGGGACCCTAA+TGG | - | tig0004591:23513-23532 | Msa1340900:intron | 50.0% |
| TAACAATGATGCTCGGCCGA+TGG | - | tig0004591:23578-23597 | Msa1340900:intron | 50.0% | |
| TGCAGATTGTGCTGGAGCAC+TGG | - | tig0004591:12207-12226 | Msa1340900:CDS | 55.0% | |
| TAGGATGGAGACGAGCTCAC+TGG | - | tig0004591:12970-12989 | Msa1340900:intron | 55.0% | |
| TGGTGGTCGGAATCGCAAAG+GGG | + | tig0004591:14380-14399 | Msa1340900:intergenic | 55.0% | |
| GTGGTGGTCGGAATCGCAAA+GGG | + | tig0004591:14381-14400 | Msa1340900:intergenic | 55.0% | |
| CTTTGCGATTCCGACCACCA+CGG | - | tig0004591:14380-14399 | Msa1340900:intron | 55.0% | |
| CCTCCGTAAGTGAATGGGTG+CGG | + | tig0004591:14408-14427 | Msa1340900:intergenic | 55.0% | |
| ACCCATTCACTTACGGAGGC+CGG | - | tig0004591:14409-14428 | Msa1340900:intron | 55.0% | |
| ACCGGCCTCCGTAAGTGAAT+GGG | + | tig0004591:14413-14432 | Msa1340900:intergenic | 55.0% | |
| AACCGGCCTCCGTAAGTGAA+TGG | + | tig0004591:14414-14433 | Msa1340900:intergenic | 55.0% | |
| !! | GGTTGGTGGTGGTTGAGGAA+TGG | - | tig0004591:14943-14962 | Msa1340900:intron | 55.0% |
| !! | GGTTGGTGGTGGTTGAGGAA+TGG | - | tig0004591:14943-14962 | Msa1340900:intron | 55.0% |
| TAGGGAGAGGGTTGAGAGAG+AGG | - | tig0004591:15251-15270 | Msa1340900:intron | 55.0% | |
| GAGGCTAAATGAAGGGAGGG+GGG | - | tig0004591:15461-15480 | Msa1340900:intron | 55.0% | |
| AGGCTAAATGAAGGGAGGGG+GGG | - | tig0004591:15462-15481 | Msa1340900:intron | 55.0% | |
| !! | AGGTCTTAAAGAGTGCCCCG+GGG | - | tig0004591:15670-15689 | Msa1340900:intron | 55.0% |
| TACGAATGTTAGGGGGACCG+GGG | + | tig0004591:17460-17479 | Msa1340900:intergenic | 55.0% | |
| GACAGAGCTGTAGAGGCAGA+TGG | - | tig0004591:17867-17886 | Msa1340900:intron | 55.0% | |
| AGCTCCGACACAACTCAGAG+AGG | - | tig0004591:18624-18643 | Msa1340900:intron | 55.0% | |
| TTGGGTTCAAACCCGGACGA+AGG | + | tig0004591:19503-19522 | Msa1340900:intergenic | 55.0% | |
| GGAGGACTTGGGTTCAAACC+CGG | + | tig0004591:19510-19529 | Msa1340900:intergenic | 55.0% | |
| GTTGCTGCAGCAATTGCGCA+TGG | - | tig0004591:21750-21769 | Msa1340900:intron | 55.0% | |
| ! | TCCGTGCTACTCTCCATCCT+AGG | - | tig0004591:23058-23077 | Msa1340900:intron | 55.0% |
| CCGTGGGATACTGCATTCAC+AGG | - | tig0004591:23260-23279 | Msa1340900:intron | 55.0% | |
| GCTTGACCAGGAAACAAGGG+TGG | - | tig0004591:23431-23450 | Msa1340900:intron | 55.0% | |
| GACTGTCCAGTGTCTGCCAT+CGG | + | tig0004591:23597-23616 | Msa1340900:intergenic | 55.0% | |
| GGAGGACGGTTCTACCATGG+TGG | - | tig0004591:14351-14370 | Msa1340900:intron | 60.0% | |
| TCGCAAAGGGGGAACCACCA+TGG | + | tig0004591:14368-14387 | Msa1340900:intergenic | 60.0% | |
| GGTGGTCGGAATCGCAAAGG+GGG | + | tig0004591:14379-14398 | Msa1340900:intergenic | 60.0% | |
| CGTGGTGGTCGGAATCGCAA+AGG | + | tig0004591:14382-14401 | Msa1340900:intergenic | 60.0% | |
| AGTGAATGGGTGCGGTTCCG+TGG | + | tig0004591:14400-14419 | Msa1340900:intergenic | 60.0% | |
| CCGCACCCATTCACTTACGG+AGG | - | tig0004591:14405-14424 | Msa1340900:intron | 60.0% | |
| ! | ACGGAGGCCGGTTCTACCAT+CGG | - | tig0004591:14421-14440 | Msa1340900:intron | 60.0% |
| TGGACGGGGTGAAACCATGG+AGG | + | tig0004591:14456-14475 | Msa1340900:intergenic | 60.0% | |
| GCATGGACGGGGTGAAACCA+TGG | + | tig0004591:14459-14478 | Msa1340900:intergenic | 60.0% | |
| ! | GGTGGTGGTTGAGGAATGGG+TGG | - | tig0004591:14947-14966 | Msa1340900:intron | 60.0% |
| ! | GGTGGTGGTTGAGGAATGGG+TGG | - | tig0004591:14947-14966 | Msa1340900:intron | 60.0% |
| GGCTAAATGAAGGGAGGGGG+GGG | - | tig0004591:15463-15482 | Msa1340900:intron | 60.0% | |
| GCTAAATGAAGGGAGGGGGG+GGG | - | tig0004591:15464-15483 | Msa1340900:intron | 60.0% | |
| CTAAATGAAGGGAGGGGGGG+GGG | - | tig0004591:15465-15484 | Msa1340900:intron | 60.0% | |
| TAAATGAAGGGAGGGGGGGG+GGG | - | tig0004591:15466-15485 | Msa1340900:intron | 60.0% | |
| !! | GGTCTTAAAGAGTGCCCCGG+GGG | - | tig0004591:15671-15690 | Msa1340900:intron | 60.0% |
| CAGAGCCGCAGAGGTAGTCT+TGG | - | tig0004591:17027-17046 | Msa1340900:intron | 60.0% | |
| GTTAGGGGGACCGGGGAATT+TGG | + | tig0004591:17453-17472 | Msa1340900:intergenic | 60.0% | |
| GCAGGCACATTTAGTGCGGG+CGG | - | tig0004591:21662-21681 | Msa1340900:intron | 60.0% | |
| GAATGGGTGCGGTTCCGTGG+TGG | + | tig0004591:14397-14416 | Msa1340900:intergenic | 65.0% | |
| AAATGAAGGGAGGGGGGGGG+GGG | - | tig0004591:15467-15486 | Msa1340900:intron | 65.0% | |
| TCTGCGGCTCTGCCACTCCA+AGG | + | tig0004591:17019-17038 | Msa1340900:intergenic | 65.0% | |
| TTGGAGTGGCAGAGCCGCAG+AGG | - | tig0004591:17018-17037 | Msa1340900:intron | 65.0% | |
| GGGTGCGGTTCCGTGGTGGT+CGG | + | tig0004591:14393-14412 | Msa1340900:intergenic | 70.0% | |
| AATGAAGGGAGGGGGGGGGG+GGG | - | tig0004591:15468-15487 | Msa1340900:intron | 70.0% | |
| GCTCGGCCGATGGCAGACAC+TGG | - | tig0004591:23588-23607 | Msa1340900:intron | 70.0% | |
| ATGAAGGGAGGGGGGGGGGG+GGG | - | tig0004591:15469-15488 | Msa1340900:intron | 75.0% | |
| ! | TGAAGGGAGGGGGGGGGGGG+GGG | - | tig0004591:15470-15489 | Msa1340900:intron | 80.0% |
| ! | GAAGGGAGGGGGGGGGGGGG+GGG | - | tig0004591:15471-15490 | Msa1340900:intron | 85.0% |
| ! | AAGGGAGGGGGGGGGGGGGG+GGG | - | tig0004591:15472-15491 | Msa1340900:intron | 85.0% |
| ! | AGGGAGGGGGGGGGGGGGGG+GGG | - | tig0004591:15473-15492 | Msa1340900:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGGCTT+TGG | - | tig0004591:15489-15508 | Msa1340900:intron | 90.0% |
| ! | GGGAGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15474-15493 | Msa1340900:intron | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15475-15494 | Msa1340900:intron | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15476-15495 | Msa1340900:intron | 95.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | tig0004591:15477-15496 | Msa1340900:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004591 | gene | 12181 | 23773 | 12181 | ID=Msa1340900;Name=Msa1340900 |
| tig0004591 | mRNA | 12181 | 23773 | 12181 | ID=Msa1340900-mRNA-1;Parent=Msa1340900;Name=Msa1340900-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.62|0.55|1|0.75|0.66|9|0|409 |
| tig0004591 | exon | 12181 | 12312 | 12181 | ID=Msa1340900-mRNA-1:exon:2899;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 12322 | 12543 | 12322 | ID=Msa1340900-mRNA-1:exon:2898;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 12637 | 12720 | 12637 | ID=Msa1340900-mRNA-1:exon:2897;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 12808 | 12979 | 12808 | ID=Msa1340900-mRNA-1:exon:2896;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 14047 | 14288 | 14047 | ID=Msa1340900-mRNA-1:exon:2895;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 17673 | 17761 | 17673 | ID=Msa1340900-mRNA-1:exon:2894;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 18066 | 18222 | 18066 | ID=Msa1340900-mRNA-1:exon:2893;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 22931 | 22981 | 22931 | ID=Msa1340900-mRNA-1:exon:2892;Parent=Msa1340900-mRNA-1 |
| tig0004591 | exon | 23696 | 23773 | 23696 | ID=Msa1340900-mRNA-1:exon:2891;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 23696 | 23773 | 23696 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 22931 | 22981 | 22931 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 18066 | 18222 | 18066 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 17673 | 17761 | 17673 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 14047 | 14288 | 14047 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 12808 | 12979 | 12808 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 12637 | 12720 | 12637 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 12322 | 12543 | 12322 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| tig0004591 | CDS | 12181 | 12312 | 12181 | ID=Msa1340900-mRNA-1:cds;Parent=Msa1340900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
