AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1341230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341230 MtrunA17_Chr4g0068011 95.794 642 6 1 1 621 2 643 0.0 1270
Msa1341230 MtrunA17_Chr4g0068001 94.990 479 21 1 644 1122 1 476 0.0 933
Msa1341230 MtrunA17_Chr3g0106951 88.081 495 42 4 644 1122 1 494 0.0 860
Msa1341230 MtrunA17_Chr2g0294901 66.615 641 182 7 8 620 10 646 0.0 845
Msa1341230 MtrunA17_Chr2g0319581 51.252 599 263 7 30 607 53 643 0.0 597
Msa1341230 MtrunA17_Chr5g0394101 57.461 449 182 5 176 622 19 460 0.0 547
Msa1341230 MtrunA17_Chr7g0219921 27.451 459 271 22 182 625 34 445 2.93e-40 155
Msa1341230 MtrunA17_Chr2g0333731 26.407 462 263 21 182 621 35 441 7.48e-38 148
Msa1341230 MtrunA17_Chr6g0455401 26.829 451 271 20 182 620 35 438 4.96e-36 142
Msa1341230 MtrunA17_Chr5g0394091 43.333 150 85 0 28 177 36 185 1.74e-35 135
Msa1341230 MtrunA17_Chr6g0455411 27.765 443 247 24 182 606 26 413 1.66e-33 135
Msa1341230 MtrunA17_Chr2g0308371 28.481 474 276 23 156 614 4 429 1.78e-33 135
Msa1341230 MtrunA17_Chr2g0308381 25.566 442 274 17 182 614 41 436 4.20e-33 134
Msa1341230 MtrunA17_Chr3g0145441 23.404 423 273 13 182 596 49 428 3.45e-32 132
Msa1341230 MtrunA17_Chr6g0455391 25.476 420 258 17 182 596 34 403 2.29e-30 125
Msa1341230 MtrunA17_Chr7g0219931 27.273 429 244 23 182 597 26 399 3.20e-30 125
Msa1341230 MtrunA17_Chr4g0067991 52.273 88 40 2 526 613 7 92 2.05e-17 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341230 AT4G16120.1 66.501 603 176 5 31 610 46 645 0.0 845
Msa1341230 AT3G16860.1 63.474 616 198 5 27 620 36 646 0.0 803
Msa1341230 AT5G49270.1 60.393 611 215 6 31 617 45 652 0.0 775
Msa1341230 AT3G02660.1 73.488 430 108 2 694 1123 83 506 0.0 663
Msa1341230 AT3G02660.2 73.488 430 108 2 694 1123 83 506 0.0 663
Msa1341230 AT3G20580.1 51.456 618 269 5 31 621 58 671 0.0 643
Msa1341230 AT4G27110.1 50.163 614 280 5 31 622 48 657 0.0 639
Msa1341230 AT3G29810.1 27.423 423 247 20 183 596 36 407 3.21e-35 140
Msa1341230 AT5G60920.1 26.697 442 266 20 183 611 44 440 4.42e-35 140
Msa1341230 AT5G15630.1 27.193 456 263 22 182 623 27 427 5.39e-34 137
Msa1341230 AT5G60920.2 26.484 438 264 20 187 611 1 393 4.03e-33 134
Msa1341230 AT3G02210.1 25.983 458 276 22 182 624 40 449 9.22e-33 133
Msa1341230 AT1G09790.1 26.932 427 246 17 183 597 43 415 1.56e-32 133
Msa1341230 AT1G09790.2 26.932 427 246 17 183 597 32 404 2.12e-32 132
Msa1341230 AT5G15630.3 27.335 439 250 22 199 623 8 391 3.91e-31 127
Msa1341230 AT5G15630.4 27.336 428 239 22 208 623 11 378 2.13e-30 125
Msa1341230 AT5G15630.2 27.336 428 239 22 208 623 11 378 2.13e-30 125
Msa1341230 AT5G15630.5 27.439 328 191 17 182 501 27 315 6.61e-24 105

Find 314 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGAAGAAGATTTATT+TGG 0.129401 tig0004802:-26810 None:intergenic
AATCGGTAGGGTTGCTTCTT+TGG 0.148872 tig0004802:-19738 None:intergenic
TTACTAGGATCCATAGATTT+TGG 0.187680 tig0004802:-21230 None:intergenic
GTGGAAAGAGTTTAGTTTAT+TGG 0.192217 tig0004802:+24564 Msa1341230:CDS
GAGGGTGTTAATGTTCAAAT+TGG 0.195282 tig0004802:+24742 Msa1341230:CDS
CTTGCATTTGGGCAATTTAT+TGG 0.219018 tig0004802:+24294 Msa1341230:CDS
GTTGATCTTTCTGTTTCTTC+TGG 0.223800 tig0004802:+25270 Msa1341230:CDS
ATTAACACCACCTATTTCTA+TGG 0.228436 tig0004802:-21894 None:intergenic
CAAGCCTTCCGAGAGGATTT+TGG 0.236120 tig0004802:-20959 None:intergenic
ATCGGTAGGGTTGCTTCTTT+GGG 0.254639 tig0004802:-19737 None:intergenic
CCCATTGAAGAAGACTTTCT+TGG 0.260858 tig0004802:-22086 None:intergenic
CTCTCGGAAGGCTTGATAAT+TGG 0.261046 tig0004802:+20967 Msa1341230:CDS
CCGTCTGTTCTGGATGCTTC+TGG 0.272420 tig0004802:+21047 Msa1341230:CDS
CATGTTCTTGCTGTAGTCTT+GGG 0.274342 tig0004802:-21566 None:intergenic
GATCCTATGATTCAAATTAC+TGG 0.274911 tig0004802:+20916 Msa1341230:CDS
AACTGCCCAGAGCTTGCATT+TGG 0.275080 tig0004802:+24282 Msa1341230:CDS
TACTATATTGCCAAAATCTA+TGG 0.276132 tig0004802:+21220 Msa1341230:CDS
CAGGCTCAGGTTAGTCTTGT+TGG 0.311347 tig0004802:+19984 Msa1341230:CDS
TCATTAACATTACCAAAGTT+TGG 0.314593 tig0004802:-24511 None:intergenic
ATCGGTAGTGATGTTTGATT+TGG 0.314745 tig0004802:-26738 None:intergenic
GGAAAATTCCTTCTTGTTGC+CGG 0.319950 tig0004802:+21192 Msa1341230:CDS
TTACTGTCAGATTATAATAA+AGG 0.326170 tig0004802:+21749 Msa1341230:CDS
AATCGGAGGATGGTGCAATT+TGG 0.337131 tig0004802:+24893 Msa1341230:CDS
AGGGTGTTAATGTTCAAATT+GGG 0.342798 tig0004802:+24743 Msa1341230:CDS
ATCGGTATCGTTTGTGGTGA+CGG 0.345205 tig0004802:+26782 Msa1341230:CDS
TTCCAACCAGTGGTGCTTCC+AGG 0.345344 tig0004802:+22134 Msa1341230:CDS
ATGGTTTGAGCGAAGCTCTT+AGG 0.345411 tig0004802:+25127 Msa1341230:CDS
AGGAGCTTATCCGTCTGTTC+TGG 0.349215 tig0004802:+21037 Msa1341230:CDS
AAGTTTCTGCCGCGTCAAAA+TGG 0.352120 tig0004802:+20864 Msa1341230:CDS
CCTCGAACAAAGAGGGTTAC+TGG 0.361275 tig0004802:+24177 Msa1341230:CDS
CCCAAGAAAGTCTTCTTCAA+TGG 0.363886 tig0004802:+22085 Msa1341230:CDS
TTCCGGATGCTGATGTTGTT+AGG 0.364256 tig0004802:+24968 Msa1341230:CDS
CTGCTGGAACTGAGTTGATT+AGG 0.368084 tig0004802:+24791 Msa1341230:CDS
TACGATAATAATGCAAGGTT+TGG 0.371365 tig0004802:+21919 Msa1341230:CDS
CCAAGAAAGTCTTCTTCAAT+GGG 0.375765 tig0004802:+22086 Msa1341230:CDS
CGTCAAGTTGAGGTCTTTCA+AGG 0.375811 tig0004802:-24414 None:intergenic
TCATCGCCGTAGTGTCTGTT+TGG 0.380318 tig0004802:-19563 None:intergenic
AACGGCAACCCTGTTGGATC+TGG 0.382141 tig0004802:-21404 None:intergenic
ACATGTTCTTGCTGTAGTCT+TGG 0.382839 tig0004802:-21567 None:intergenic
TCAACTTGACGTTGAGACTT+TGG 0.383301 tig0004802:+24426 Msa1341230:CDS
TCACCGCAAGGTGGTGGGTT+TGG 0.383667 tig0004802:-21698 None:intergenic
CCATTGAAGAAGACTTTCTT+GGG 0.383850 tig0004802:-22085 None:intergenic
AGGAAGATATTGCAGGTAGA+AGG 0.384359 tig0004802:+24811 Msa1341230:CDS
GCGCGTATCGGTGACCCATC+AGG 0.387427 tig0004802:+24385 Msa1341230:CDS
TGATGGCTAAAGAGAGTGTT+AGG 0.395551 tig0004802:+24629 Msa1341230:CDS
TCAGTATCATTGAATTTAGT+AGG 0.395669 tig0004802:-21164 None:intergenic
GTTGTGTTGATGATGATGTT+GGG 0.398098 tig0004802:-23986 None:intergenic
AAAAGCGATGGTACAAAATT+CGG 0.400589 tig0004802:+24868 Msa1341230:CDS
AGCTTTCACCACCACAGAAC+TGG 0.402237 tig0004802:+21312 Msa1341230:CDS
AGGCTCAGGTTAGTCTTGTT+GGG 0.402608 tig0004802:+19985 Msa1341230:CDS
ACCGTTGTTGAGCACGCTTA+AGG 0.403977 tig0004802:-19769 None:intergenic
CCAGTAACCCTCTTTGTTCG+AGG 0.405816 tig0004802:-24177 None:intergenic
TTGATAATTGGAGGTTGAGC+TGG 0.407068 tig0004802:+20979 Msa1341230:CDS
AATGCAAGCGCCATAGAAAT+AGG 0.411365 tig0004802:+21884 Msa1341230:CDS
CGATCAATGCGACGACGTTA+TGG 0.411733 tig0004802:-24351 None:intergenic
GGAGGACCGCATTTGTAGTC+AGG 0.413192 tig0004802:-21356 None:intergenic
GTGCAGGTTGTTCGAGAAAA+GGG 0.414099 tig0004802:-24118 None:intergenic
TTCCTTCCTGGAAGCACCAC+TGG 0.414288 tig0004802:-22140 None:intergenic
TGGCTCTCATTGTTCTCTCA+TGG 0.414851 tig0004802:+24314 Msa1341230:CDS
AATTGCCCAAATGCAAGCTC+TGG 0.415341 tig0004802:-24288 None:intergenic
AAACGGTGCCGTTTCCAACT+TGG 0.415959 tig0004802:-19896 None:intergenic
TGACCTTGAAACAAAATTTG+TGG 0.417164 tig0004802:-24014 None:intergenic
CGTACAGATCCTAGGGTGCC+TGG 0.420757 tig0004802:+21986 Msa1341230:CDS
GCTTCAAATTTCGAATTTGA+AGG 0.422056 tig0004802:+19530 Msa1341230:five_prime_UTR
TATTGATGAGATAGTTAAGT+TGG 0.422171 tig0004802:+25017 Msa1341230:CDS
GTTGATTAGGAAGATATTGC+AGG 0.422855 tig0004802:+24804 Msa1341230:CDS
TTTGTATTTGTTTCAGAATG+AGG 0.423118 tig0004802:+24723 Msa1341230:CDS
CTGGTTTACTGCTGTGCAAA+TGG 0.424089 tig0004802:+21823 Msa1341230:CDS
TGGTTTGAGCGAAGCTCTTA+GGG 0.428012 tig0004802:+25128 Msa1341230:CDS
TCATTGAAGAAGATTTATTT+GGG 0.429452 tig0004802:-26809 None:intergenic
CTTTGGAGAGGAACACTGTT+GGG 0.429878 tig0004802:+24443 Msa1341230:CDS
GCCAAGGCTTATGCGTGGGC+GGG 0.430061 tig0004802:+21656 Msa1341230:CDS
AGTAGGAGGAAGATCAATAA+TGG 0.431671 tig0004802:-21147 None:intergenic
TGCCCAGTAATTTGAATCAT+AGG 0.431744 tig0004802:-20919 None:intergenic
TTGGCAATATAGTACCGTTC+CGG 0.432627 tig0004802:-21211 None:intergenic
CAGGCTCAGATAAGCCTTGT+TGG 0.433597 tig0004802:+26260 Msa1341230:CDS
AAATACTGATAAAACTTGTA+TGG 0.433957 tig0004802:-24937 None:intergenic
CATCGCCGTAGTGTCTGTTT+GGG 0.435636 tig0004802:-19562 None:intergenic
TTGTATTTGTTTCAGAATGA+GGG 0.436229 tig0004802:+24724 Msa1341230:CDS
CCTGGAATCGGTATCGTTTG+TGG 0.436306 tig0004802:+26776 Msa1341230:CDS
AGCAAAGGAAAATTCCTTCC+TGG 0.437794 tig0004802:-22152 None:intergenic
GACTTCGGCAACGGAACATC+CGG 0.438547 tig0004802:-20029 None:intergenic
GCATTTACTTGATGTTCCCT+TGG 0.438776 tig0004802:-21477 None:intergenic
GAGGGATTGAACTACCTTGT+TGG 0.439092 tig0004802:+21941 Msa1341230:CDS
TTGTTGGTGTTGGAGAGTGC+AGG 0.440279 tig0004802:-24134 None:intergenic
TGTTGTTTCCCAGGCACCCT+AGG 0.445041 tig0004802:-21995 None:intergenic
TCGGTATCGTTTGTGGTGAC+GGG 0.446605 tig0004802:+26783 Msa1341230:CDS
CTAACCCTCGTACAGATCCT+AGG 0.448064 tig0004802:+21978 Msa1341230:CDS
GAGTAGATAGTGAAAATAAG+AGG 0.448915 tig0004802:+25361 Msa1341230:CDS
CGATTTGTTCACGGAGAAGA+TGG 0.451351 tig0004802:+25108 Msa1341230:CDS
TGGTACAAAATTCGGTAAAT+CGG 0.451876 tig0004802:+24876 Msa1341230:CDS
AAATGCAAGCTCTGGGCAGT+TGG 0.452365 tig0004802:-24280 None:intergenic
GCTCAAAATCATCCAAACTT+TGG 0.454056 tig0004802:+24499 Msa1341230:CDS
ACGCATAAGCCTTGGCAGTT+CGG 0.454629 tig0004802:-21649 None:intergenic
ACTGCCCAGAGCTTGCATTT+GGG 0.455274 tig0004802:+24283 Msa1341230:CDS
CCACGAACAACACTGATTCC+AGG 0.455604 tig0004802:-22049 None:intergenic
GTGCCGTTTCCAACTTGGGC+AGG 0.457122 tig0004802:-19891 None:intergenic
CCAAGGCTTATGCGTGGGCG+GGG 0.459506 tig0004802:+21657 Msa1341230:CDS
CGATGACATTCGGAGGTTGT+TGG 0.459857 tig0004802:-24150 None:intergenic
CATTCGGAGGTTGTTGGTGT+TGG 0.460247 tig0004802:-24144 None:intergenic
CGCTTAAGGTTGATTCGAAT+CGG 0.460257 tig0004802:-19755 None:intergenic
TTGTTACTGTTAGGTAAGAA+TGG 0.460415 tig0004802:+26683 Msa1341230:intron
AACGGTGCCGTTTCCAACTT+GGG 0.460477 tig0004802:-19895 None:intergenic
GATAATAATGCAAGGTTTGG+AGG 0.462661 tig0004802:+21922 Msa1341230:CDS
TGAACAAGGAATGAGTTATA+CGG 0.465225 tig0004802:+24666 Msa1341230:CDS
CTGTGGAAAACCAGCGAAAA+CGG 0.467332 tig0004802:-19913 None:intergenic
CAGGTAGAAGGTGGTACCTA+TGG 0.467385 tig0004802:+24823 Msa1341230:CDS
GGCGACTGAAGCGTTGAGGC+CGG 0.469483 tig0004802:+25149 Msa1341230:CDS
CAAGGTGGTGGGTTTGGCGT+TGG 0.470344 tig0004802:-21692 None:intergenic
CAGTTATCACCGCAAGGTGG+TGG 0.470714 tig0004802:-21704 None:intergenic
AGTGCAGGTTGTTCGAGAAA+AGG 0.471027 tig0004802:-24119 None:intergenic
ACTGAGAATCCAGATCCAAC+AGG 0.471504 tig0004802:+21395 Msa1341230:CDS
TTGGCAGTTCGGTTCTCAAA+AGG 0.472608 tig0004802:-21638 None:intergenic
CTCCCTGCCCAAGTTGGAAA+CGG 0.473019 tig0004802:+19888 Msa1341230:CDS
TGTTGTGTTGATGATGATGT+TGG 0.473595 tig0004802:-23987 None:intergenic
CCACAAACGATACCGATTCC+AGG 0.474524 tig0004802:-26776 None:intergenic
AAATTCAATGATACTGATGT+TGG 0.474771 tig0004802:+21170 Msa1341230:CDS
TCGGAAGGCTTGATAATTGG+AGG 0.474793 tig0004802:+20970 Msa1341230:CDS
TACCTTGTTGGAGAAACAAA+TGG 0.475054 tig0004802:+21953 Msa1341230:CDS
TTCTTTGGGTCGGTGACGTT+AGG 0.475843 tig0004802:-19723 None:intergenic
ACTGCGGTGTGAGCATCAAC+TGG 0.476725 tig0004802:+21723 Msa1341230:CDS
TTCACAAAGAAAACTACTCC+TGG 0.480154 tig0004802:+22031 Msa1341230:CDS
AAAACCATCAGAACAATCTT+GGG 0.482413 tig0004802:+24472 Msa1341230:CDS
AACTGTAATGGCAAGTTGGC+AGG 0.483520 tig0004802:+21433 Msa1341230:CDS
GATTGAGGCAGCTGATATAG+TGG 0.483535 tig0004802:+25383 Msa1341230:CDS
CTCTCATGGTTCCGCCGCTC+CGG 0.484093 tig0004802:+24328 Msa1341230:CDS
ATTACTGACTGTTGTTTCCC+AGG 0.485126 tig0004802:-22004 None:intergenic
GTGTTGTTCGTGGTGGTGAC+GGG 0.485449 tig0004802:+22059 Msa1341230:CDS
TGTTACTGTTAGGTAAGAAT+GGG 0.485556 tig0004802:+26684 Msa1341230:intron
TCGATCAAGCTTGCTAATGA+TGG 0.485900 tig0004802:+20050 Msa1341230:CDS
CCCCGCCCACGCATAAGCCT+TGG 0.486167 tig0004802:-21657 None:intergenic
TCGAGGATTCCGATGACATT+CGG 0.487722 tig0004802:-24160 None:intergenic
CTCAAATTATTTACATGAGA+AGG 0.488574 tig0004802:-26848 None:intergenic
GATGAAAAGAAAACTACTCC+TGG 0.489910 tig0004802:+26758 Msa1341230:CDS
GAAGTTACTCGATTTGTTCA+CGG 0.490301 tig0004802:+25099 Msa1341230:CDS
TTGGACTGGAAAACAATTGA+GGG 0.490535 tig0004802:+25186 Msa1341230:CDS
AGTGATGTTTGATTTGGACT+TGG 0.491340 tig0004802:-26732 None:intergenic
TCAGTAGGACTAACACGAAC+CGG 0.494414 tig0004802:-21377 None:intergenic
CAATGGGGTAATATAACTGC+TGG 0.495411 tig0004802:+24775 Msa1341230:CDS
AGCCTACACTGAGCATTGTT+AGG 0.495802 tig0004802:-25069 None:intergenic
AGGCTCAGATAAGCCTTGTT+GGG 0.497682 tig0004802:+26261 Msa1341230:CDS
GTAGGGTTGCTTCTTTGGGT+CGG 0.497835 tig0004802:-19733 None:intergenic
ATTGGAGGTTGAGCTGGGAC+TGG 0.498839 tig0004802:+20985 Msa1341230:CDS
GTGATGTTTGATTTGGACTT+GGG 0.498906 tig0004802:-26731 None:intergenic
CCACAGAACTGGAAGATTAG+TGG 0.499210 tig0004802:+21323 Msa1341230:CDS
AGTGTTGTTCGTGGTGGTGA+CGG 0.500030 tig0004802:+22058 Msa1341230:CDS
AATTCAATGATACTGATGTT+GGG 0.501152 tig0004802:+21171 Msa1341230:CDS
TGCCGTTTCCAACTTGGGCA+GGG 0.502823 tig0004802:-19890 None:intergenic
GGTGGTGCCACCGCGCGTAT+CGG 0.503383 tig0004802:+24373 Msa1341230:CDS
TGTCAGATTATAATAAAGGC+TGG 0.507071 tig0004802:+21753 Msa1341230:CDS
AATGCAAGCTCTGGGCAGTT+GGG 0.509824 tig0004802:-24279 None:intergenic
CATAACGTCGTCGCATTGAT+CGG 0.510628 tig0004802:+24352 Msa1341230:CDS
ATAATAAAGGCTGGAGTGCA+AGG 0.512659 tig0004802:+21762 Msa1341230:CDS
TTTGACTCAGATGCAGGCTC+AGG 0.513528 tig0004802:+19971 Msa1341230:CDS
ACCGTCAGCGAGAACAGCAT+TGG 0.514805 tig0004802:-19859 None:intergenic
GCCGTTAAACAAAACTGTAA+TGG 0.515209 tig0004802:+21421 Msa1341230:CDS
TCCAATGCTGTTCTCGCTGA+CGG 0.515524 tig0004802:+19858 Msa1341230:CDS
TGGTGATTTGACTCAGATGC+AGG 0.515734 tig0004802:+19965 Msa1341230:CDS
CTCCATTTGTTTCTCCAACA+AGG 0.515735 tig0004802:-21955 None:intergenic
GTTTACATATCAGTTATTGC+AGG 0.516931 tig0004802:+24690 Msa1341230:CDS
AATCTCGAAATAGACTTACT+AGG 0.517229 tig0004802:-21245 None:intergenic
AAGAAAACTACTCCTGGAAT+CGG 0.518201 tig0004802:+26764 Msa1341230:CDS
TCTGATGACTACTGTTGAAA+CGG 0.518331 tig0004802:+26217 Msa1341230:CDS
TGATAATTGGAGGTTGAGCT+GGG 0.519457 tig0004802:+20980 Msa1341230:CDS
TGACTACAAATGCGGTCCTC+CGG 0.521089 tig0004802:+21358 Msa1341230:CDS
GCGACTGAAGCGTTGAGGCC+GGG 0.522001 tig0004802:+25150 Msa1341230:CDS
TGCCAAGGCTTATGCGTGGG+CGG 0.522498 tig0004802:+21655 Msa1341230:CDS
ACGACCCAAGATTGTTCTGA+TGG 0.523182 tig0004802:-24476 None:intergenic
GGGTGTTAATGTTCAAATTG+GGG 0.524227 tig0004802:+24744 Msa1341230:CDS
TTGTGTTGATGATGATGTTG+GGG 0.524949 tig0004802:-23985 None:intergenic
AACCTAACAACATCAGCATC+CGG 0.526560 tig0004802:-24970 None:intergenic
TTCCTGGAAGCACCACTGGT+TGG 0.528051 tig0004802:-22136 None:intergenic
GAAGAAGAGATGAAGAAGCC+TGG 0.528949 tig0004802:+25039 Msa1341230:CDS
ATTCCTTCTTGTTGCCGGAA+CGG 0.530325 tig0004802:+21197 Msa1341230:CDS
TCTGAAGACTGCTGTTGAAA+CGG 0.530705 tig0004802:+19941 Msa1341230:CDS
CAAATGGACAAAGCAGCTGC+AGG 0.530745 tig0004802:+21839 Msa1341230:CDS
GGAAAAGAAGGTACCTTGAC+CGG 0.532171 tig0004802:-20093 None:intergenic
AAGACTGCTGTTGAAACGGC+TGG 0.533013 tig0004802:+19945 Msa1341230:CDS
ATGTTCTTGCTGTAGTCTTG+GGG 0.533385 tig0004802:-21565 None:intergenic
TTAGTATGATTGTTGCTAAG+AGG 0.536116 tig0004802:-19620 None:intergenic
TGGTGATTTGAAGCAGATGC+AGG 0.537218 tig0004802:+26241 Msa1341230:CDS
GTTGGATCTGGATTCTCAGT+AGG 0.538813 tig0004802:-21392 None:intergenic
CGCGTATCGGTGACCCATCA+GGG 0.539691 tig0004802:+24386 Msa1341230:CDS
ACAAAACTGTAATGGCAAGT+TGG 0.539967 tig0004802:+21429 Msa1341230:CDS
GCATTGTTAGGCACATATCC+AGG 0.540302 tig0004802:-25057 None:intergenic
TCGGAGGGAAGCCACATGGC+AGG 0.542326 tig0004802:-21602 None:intergenic
AGCTCAGATCGGTTAAGCAC+TGG 0.543140 tig0004802:-21293 None:intergenic
AACTGCCAAGGCTTATGCGT+GGG 0.543903 tig0004802:+21652 Msa1341230:CDS
TTAGCAAGCTTGATCGACTT+CGG 0.545707 tig0004802:-20044 None:intergenic
TAGTGAAAATAAGAGGATTG+AGG 0.546248 tig0004802:+25368 Msa1341230:CDS
TGATTCAAATTACTGGGCAG+AGG 0.546438 tig0004802:+20923 Msa1341230:CDS
ATCCTATGATTCAAATTACT+GGG 0.547534 tig0004802:+20917 Msa1341230:CDS
ACTACCCTCCCTGCCCAAGT+TGG 0.547714 tig0004802:+19882 Msa1341230:CDS
TTGTTTAACGGCAACCCTGT+TGG 0.548344 tig0004802:-21410 None:intergenic
GAATGGAAAGGTGAAAAGCT+TGG 0.548573 tig0004802:-24056 None:intergenic
TCCAACTTTGTCTCAGATCC+CGG 0.548872 tig0004802:-25168 None:intergenic
GTACAGATCCTAGGGTGCCT+GGG 0.550393 tig0004802:+21987 Msa1341230:CDS
ATGACTACTGTTGAAACGGC+TGG 0.552320 tig0004802:+26221 Msa1341230:CDS
CAAATAAATCTTCTTCAATG+AGG 0.554711 tig0004802:+26811 Msa1341230:CDS
GTTGGACTGGAAAACAATTG+AGG 0.555097 tig0004802:+25185 Msa1341230:CDS
GCCGGGATCTGAGACAAAGT+TGG 0.556041 tig0004802:+25167 Msa1341230:CDS
ATAATAATGCAAGGTTTGGA+GGG 0.559550 tig0004802:+21923 Msa1341230:CDS
GTCTCGATGAACTCAAGTCA+TGG 0.560708 tig0004802:+19790 Msa1341230:CDS
GTTTCCAACTTGGGCAGGGA+GGG 0.562855 tig0004802:-19886 None:intergenic
TTTACATATCAGTTATTGCA+GGG 0.563503 tig0004802:+24691 Msa1341230:CDS
CCTGGAATCAGTGTTGTTCG+TGG 0.565292 tig0004802:+22049 Msa1341230:CDS
AGGAACAAGGACAGCATCGG+AGG 0.565981 tig0004802:-21618 None:intergenic
TGCTAGAGTAGGTTCAATGA+TGG 0.566664 tig0004802:+24612 Msa1341230:CDS
GAGTTCATATTTACAATGAA+AGG 0.567142 tig0004802:+21017 Msa1341230:CDS
GATCTGAGACAAAGTTGGAC+TGG 0.567564 tig0004802:+25172 Msa1341230:CDS
TAAGGTTGATTCGAATCGGT+AGG 0.567762 tig0004802:-19751 None:intergenic
GTGTAACATTACAGCAGCCA+AGG 0.568058 tig0004802:+21460 Msa1341230:CDS
TATTTCGAGATTCCAAATGC+AGG 0.568240 tig0004802:+21256 Msa1341230:CDS
CAACAACCTCCGAATGTCAT+CGG 0.568790 tig0004802:+24151 Msa1341230:CDS
CGACGTTATGGCCGGAGCGG+CGG 0.569488 tig0004802:-24339 None:intergenic
CAGTTGAACTCCGACGGAAG+AGG 0.570398 tig0004802:-19697 None:intergenic
AGTTATCACCGCAAGGTGGT+GGG 0.573185 tig0004802:-21703 None:intergenic
AAGGTTGATTCGAATCGGTA+GGG 0.573411 tig0004802:-19750 None:intergenic
ACTTTGGAGAGGAACACTGT+TGG 0.575605 tig0004802:+24442 Msa1341230:CDS
CGTTTCCAACTTGGGCAGGG+AGG 0.580429 tig0004802:-19887 None:intergenic
TTTGGGTCGGTGACGTTAGG+CGG 0.582203 tig0004802:-19720 None:intergenic
CCACTGGTTGGAAGTACAGA+AGG 0.582721 tig0004802:-22124 None:intergenic
CTAATGTATTGAATTGTCAG+AGG 0.584525 tig0004802:+21117 Msa1341230:CDS
GTTGGTAAATATGCTAGAGT+AGG 0.584735 tig0004802:+24601 Msa1341230:CDS
ATTGCCCAAATGCAAGCTCT+GGG 0.587184 tig0004802:-24287 None:intergenic
AGCTTGATCGACTTCGGCAA+CGG 0.588318 tig0004802:-20038 None:intergenic
TATATTTGGTTTCTCTCACA+CGG 0.590300 tig0004802:+19508 None:intergenic
AAAAGGAACAAGGACAGCAT+CGG 0.590596 tig0004802:-21621 None:intergenic
ATCGGTAACCAAAATCCTCT+CGG 0.591098 tig0004802:+20951 Msa1341230:CDS
TCACGTCGGTTGTTAAAGCA+AGG 0.592708 tig0004802:+25315 Msa1341230:CDS
TATAAGCTAAAGAACAAGAC+GGG 0.592793 tig0004802:-25224 None:intergenic
ATAAATCTTCTTCAATGAGG+AGG 0.593630 tig0004802:+26814 Msa1341230:CDS
AAGAGGAAATGTCAAACCAT+AGG 0.595816 tig0004802:-24839 None:intergenic
TAGAAGCATCAAAGTAGCAA+AGG 0.598275 tig0004802:-22167 None:intergenic
TATGATTGTTGCTAAGAGGA+TGG 0.598936 tig0004802:-19616 None:intergenic
TAACCCTCGTACAGATCCTA+GGG 0.603078 tig0004802:+21979 Msa1341230:CDS
GTCTCATACTCCTCTTCCGT+CGG 0.603942 tig0004802:+19687 Msa1341230:CDS
AAAATCCCAAACAGACACTA+CGG 0.606402 tig0004802:+19557 Msa1341230:five_prime_UTR
CCTTCTGTACTTCCAACCAG+TGG 0.607323 tig0004802:+22124 Msa1341230:CDS
AGCATCGGAGGGAAGCCACA+TGG 0.607549 tig0004802:-21606 None:intergenic
CCAGAAGCATCCAGAACAGA+CGG 0.608061 tig0004802:-21047 None:intergenic
GGAGGAAGATCAATAATGGT+AGG 0.609021 tig0004802:-21143 None:intergenic
GTAACCAAAATCCTCTCGGA+AGG 0.609632 tig0004802:+20955 Msa1341230:CDS
ACCTTAAGCGTGCTCAACAA+CGG 0.611367 tig0004802:+19768 Msa1341230:CDS
CCACTAATCTTCCAGTTCTG+TGG 0.611751 tig0004802:-21323 None:intergenic
AATAATACGATAATAATGCA+AGG 0.613339 tig0004802:+21914 Msa1341230:CDS
AACCAGTGGTGCTTCCAGGA+AGG 0.613395 tig0004802:+22138 Msa1341230:CDS
GAAAGTCTTCTTCAATGGGG+AGG 0.614351 tig0004802:+22090 Msa1341230:CDS
GGATGGTGAAGAAGCTACAG+AGG 0.616294 tig0004802:-19599 None:intergenic
GAGGACCGCATTTGTAGTCA+GGG 0.616412 tig0004802:-21355 None:intergenic
TACAAAATTCGGTAAATCGG+AGG 0.617777 tig0004802:+24879 Msa1341230:CDS
TGCAGGTTGTTCGAGAAAAG+GGG 0.618680 tig0004802:-24117 None:intergenic
TTCGGCAACGGAACATCCGG+CGG 0.619708 tig0004802:-20026 None:intergenic
TACTGGGCAGAGGTTACGAT+CGG 0.620728 tig0004802:+20933 Msa1341230:CDS
TGCCTAACAATGCTCAGTGT+AGG 0.622030 tig0004802:+25067 Msa1341230:CDS
GTACCGTTCCGGCAACAAGA+AGG 0.625866 tig0004802:-21200 None:intergenic
ACCGTTGCACGATTGTGCAT+CGG 0.626352 tig0004802:-19658 None:intergenic
GAGGCAGCTGATATAGTGGA+TGG 0.626682 tig0004802:+25387 Msa1341230:CDS
GGAACAAGGACAGCATCGGA+GGG 0.627005 tig0004802:-21617 None:intergenic
TCGGAATCCTCGAACAAAGA+GGG 0.627905 tig0004802:+24170 Msa1341230:CDS
AACGTCGTCGCATTGATCGG+TGG 0.632250 tig0004802:+24355 Msa1341230:CDS
AAATTCGGTAAATCGGAGGA+TGG 0.633132 tig0004802:+24883 Msa1341230:CDS
TGGAAAGGTGAAAAGCTTGG+CGG 0.633760 tig0004802:-24053 None:intergenic
AGGCGGCAGTTGAACTCCGA+CGG 0.634791 tig0004802:-19703 None:intergenic
CTAATCTTCCAGTTCTGTGG+TGG 0.635482 tig0004802:-21320 None:intergenic
TAATAAAGGCTGGAGTGCAA+GGG 0.636466 tig0004802:+21763 Msa1341230:CDS
AAGATATTGCAGGTAGAAGG+TGG 0.636964 tig0004802:+24814 Msa1341230:CDS
ACCGATGCACAATCGTGCAA+CGG 0.638244 tig0004802:+19657 Msa1341230:CDS
TTAGGGCGACTGAAGCGTTG+AGG 0.638976 tig0004802:+25145 Msa1341230:CDS
TGTGTTGATGATGATGTTGG+GGG 0.642257 tig0004802:-23984 None:intergenic
GTATCATTGAATTTAGTAGG+AGG 0.642696 tig0004802:-21161 None:intergenic
CTGAGAATCCAGATCCAACA+GGG 0.643968 tig0004802:+21396 Msa1341230:CDS
TTCGGTTCTCAAAAGGAACA+AGG 0.646440 tig0004802:-21631 None:intergenic
AGGATTCCGATGACATTCGG+AGG 0.646714 tig0004802:-24157 None:intergenic
AAACTTGTATGGAGATAACA+TGG 0.646805 tig0004802:-24926 None:intergenic
TCAGATCGGTTAAGCACTGG+CGG 0.649427 tig0004802:-21290 None:intergenic
CGACGACGTTATGGCCGGAG+CGG 0.650851 tig0004802:-24342 None:intergenic
CCACCTTGCGGTGATAACTG+CGG 0.653782 tig0004802:+21707 Msa1341230:CDS
CATCATCATCAACACAACAA+TGG 0.655096 tig0004802:+23991 Msa1341230:CDS
CCTTGCAAAACGTGTGCATG+TGG 0.655324 tig0004802:+21539 Msa1341230:CDS
AACAATTGAGGGGATTGCTG+AGG 0.655329 tig0004802:+25197 Msa1341230:CDS
ACGCCAAACCCACCACCTTG+CGG 0.656219 tig0004802:+21695 Msa1341230:CDS
GGTGTTAATGTTCAAATTGG+GGG 0.656721 tig0004802:+24745 Msa1341230:CDS
TGGACTGGAAAACAATTGAG+GGG 0.656853 tig0004802:+25187 Msa1341230:CDS
TGTAACATTACAGCAGCCAA+GGG 0.657044 tig0004802:+21461 Msa1341230:CDS
ATCGGAATCCTCGAACAAAG+AGG 0.657120 tig0004802:+24169 Msa1341230:CDS
ATGTATTGAATTGTCAGAGG+AGG 0.658273 tig0004802:+21120 Msa1341230:CDS
TTGACGTTGAGACTTTGGAG+AGG 0.659332 tig0004802:+24431 Msa1341230:CDS
TTGTATGGAGATAACATGGA+CGG 0.662116 tig0004802:-24922 None:intergenic
GGCACCCTAGGATCTGTACG+AGG 0.663910 tig0004802:-21983 None:intergenic
TTATAAGCTAAAGAACAAGA+CGG 0.664861 tig0004802:-25225 None:intergenic
GCAGTCTTCAGATCCGTCTG+TGG 0.665018 tig0004802:-19930 None:intergenic
GAACTGCCAAGGCTTATGCG+TGG 0.665041 tig0004802:+21651 Msa1341230:CDS
TGATGGGTCACCGATACGCG+CGG 0.666232 tig0004802:-24383 None:intergenic
GTGGTGGTGAAAGCTCAGAT+CGG 0.667445 tig0004802:-21304 None:intergenic
CTTAACCCTGACTACAAATG+CGG 0.671840 tig0004802:+21350 Msa1341230:CDS
GTACTACTGCACCTGCCATG+TGG 0.672557 tig0004802:+21591 Msa1341230:CDS
AAAGAAGGTACCTTGACCGG+TGG 0.672787 tig0004802:-20090 None:intergenic
ACACCGCAGTTATCACCGCA+AGG 0.673011 tig0004802:-21710 None:intergenic
GGAATCAGTGTTGTTCGTGG+TGG 0.683056 tig0004802:+22052 Msa1341230:CDS
CTCGTCGTGCTGAAACTCGA+CGG 0.683361 tig0004802:-19820 None:intergenic
AAGAGATTAGAATCTGAACA+AGG 0.686673 tig0004802:+24652 Msa1341230:CDS
AAGAAGACGACTAGCAACAG+TGG 0.694424 tig0004802:-22190 None:intergenic
CGTCGGTTGTTAAAGCAAGG+AGG 0.694674 tig0004802:+25318 Msa1341230:CDS
AAAGTCTCAACGTCAAGTTG+AGG 0.696508 tig0004802:-24424 None:intergenic
GCAAGCGCCATAGAAATAGG+TGG 0.697809 tig0004802:+21887 Msa1341230:CDS
GCACCCTTAAAAGTCTACTG+TGG 0.700380 tig0004802:+24250 Msa1341230:CDS
GTAGGACTAACACGAACCGG+AGG 0.701832 tig0004802:-21374 None:intergenic
AGGTTGTTCGAGAAAAGGGG+AGG 0.706249 tig0004802:-24114 None:intergenic
CAAGAAAGTCTTCTTCAATG+GGG 0.710859 tig0004802:+22087 Msa1341230:CDS
CAATTATCAAGCCTTCCGAG+AGG 0.713612 tig0004802:-20966 None:intergenic
ACAGCAAATCTGCTTCACGT+CGG 0.723568 tig0004802:+25301 Msa1341230:CDS
GCACCCTAGGATCTGTACGA+GGG 0.745402 tig0004802:-21982 None:intergenic
CCGCAGTTATCACCGCAAGG+TGG 0.768131 tig0004802:-21707 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATTTTTTTCCAATTA+AGG + tig0004802:20407-20426 Msa1341230:intron 10.0%
!!! ATTTAACCTTTTTTTTTAAA+TGG + tig0004802:20760-20779 Msa1341230:intron 10.0%
!!! TTTTTATTATAATTCTGTTT+GGG + tig0004802:22507-22526 Msa1341230:intron 10.0%
!!! AATTTAAGGAATTTTTTTTT+TGG + tig0004802:22958-22977 Msa1341230:intron 10.0%
!! TTATAAGAAAGATTATATTT+AGG + tig0004802:23299-23318 Msa1341230:intron 10.0%
!! TATAAGAAAGATTATATTTA+GGG + tig0004802:23300-23319 Msa1341230:intron 10.0%
!! AAATGATTATTAAAAATTGT+AGG + tig0004802:23893-23912 Msa1341230:intron 10.0%
!! AAAAAAAAAAAAGGAAAAGA+AGG - tig0004802:20108-20127 None:intergenic 15.0%
!!! TTTTTTGGAATTTTTTGTAT+AGG + tig0004802:20139-20158 Msa1341230:intron 15.0%
!!! GTTTTGTAATTTATTGAATA+AGG + tig0004802:20217-20236 Msa1341230:intron 15.0%
!!! GTTTTTATTATAATTCTGTT+TGG + tig0004802:22506-22525 Msa1341230:intron 15.0%
!!! TTTGAAAATTCTTACTTTTT+TGG + tig0004802:24993-25012 Msa1341230:CDS 15.0%
!! TTTATTAGATGAATATTCTT+TGG + tig0004802:25473-25492 Msa1341230:intron 15.0%
!! TTATTAGATGAATATTCTTT+GGG + tig0004802:25474-25493 Msa1341230:intron 15.0%
!!! ACTTTTTTTTGTTTTGAAAA+GGG - tig0004802:25802-25821 None:intergenic 15.0%
!!! TACTTTTTTTTGTTTTGAAA+AGG - tig0004802:25803-25822 None:intergenic 15.0%
!!! TTTTTCAATAATGATTTGTT+TGG + tig0004802:26355-26374 Msa1341230:intron 15.0%
!! TTGAATTTGTATGTATTGTT+TGG + tig0004802:20334-20353 Msa1341230:intron 20.0%
!! ACAACTTAATTAAAAGCTTA+AGG - tig0004802:20721-20740 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTGAAAC+AGG + tig0004802:20731-20750 Msa1341230:intron 20.0%
!! CAACAACCATTTAAAAAAAA+AGG - tig0004802:20769-20788 None:intergenic 20.0%
!! TTACTGTCAGATTATAATAA+AGG + tig0004802:21749-21768 Msa1341230:CDS 20.0%
!! AATAATACGATAATAATGCA+AGG + tig0004802:21914-21933 Msa1341230:CDS 20.0%
!!! GAAATATGTTACTTTTCTAT+TGG + tig0004802:22457-22476 Msa1341230:intron 20.0%
!! TAACAAAACATATTTAACCA+TGG - tig0004802:22602-22621 None:intergenic 20.0%
!! ATATTCATTTACTTCCAAAA+TGG - tig0004802:22793-22812 None:intergenic 20.0%
!! CTATAAAATTCATATGCAAA+TGG - tig0004802:23388-23407 None:intergenic 20.0%
!!! TTGTTTTGAACAATTATGAT+TGG + tig0004802:24542-24561 Msa1341230:CDS 20.0%
!!! TTTATTGGATTTTCTGAAAA+GGG + tig0004802:24579-24598 Msa1341230:CDS 20.0%
!! AAATACTGATAAAACTTGTA+TGG - tig0004802:24940-24959 None:intergenic 20.0%
!!! GTTTTATCAGTATTTTTTCT+CGG + tig0004802:24945-24964 Msa1341230:CDS 20.0%
!! TATTAGATGAATATTCTTTG+GGG + tig0004802:25475-25494 Msa1341230:intron 20.0%
!!! AGTGTTTTATTTATTCTGTT+TGG + tig0004802:25498-25517 Msa1341230:intron 20.0%
!! TTTATAACTCAAATCAACTA+TGG - tig0004802:25840-25859 None:intergenic 20.0%
!!! TTTGATCTAAGATTTGATTA+AGG + tig0004802:26322-26341 Msa1341230:intron 20.0%
!!! TTGATCTAAGATTTGATTAA+GGG + tig0004802:26323-26342 Msa1341230:intron 20.0%
!!! AATAAAGTCAAAACCATTTT+CGG - tig0004802:26521-26540 None:intergenic 20.0%
!! ACAACATAATTAAAAGCTTA+TGG - tig0004802:26592-26611 None:intergenic 20.0%
!!! AACTTAATTTGGTTTAGTTT+AGG + tig0004802:26625-26644 Msa1341230:intron 20.0%
!! TCATTGAAGAAGATTTATTT+GGG - tig0004802:26812-26831 None:intergenic 20.0%
! TTATTGAATAAGGTTCTGTT+TGG + tig0004802:20227-20246 Msa1341230:intron 25.0%
!! TTACAAGCTATTCACTATTT+TGG - tig0004802:20279-20298 None:intergenic 25.0%
!! AATTCAATGATCTAGCTTAT+GGG - tig0004802:20321-20340 None:intergenic 25.0%
!! AAATTCAATGATCTAGCTTA+TGG - tig0004802:20322-20341 None:intergenic 25.0%
!! TTTTTCCAATTAAGGTTACA+AGG + tig0004802:20415-20434 Msa1341230:intron 25.0%
!! TTTTCCAATTAAGGTTACAA+GGG + tig0004802:20416-20435 Msa1341230:intron 25.0%
! TTGACTAAAAAAGAACTGAT+TGG - tig0004802:20511-20530 None:intergenic 25.0%
! TAACTATAAGCTCAAATATG+TGG + tig0004802:20554-20573 Msa1341230:intron 25.0%
!!! AGATAAAATCGTTTTTTCGT+AGG - tig0004802:20647-20666 None:intergenic 25.0%
! ATCCTATGATTCAAATTACT+GGG + tig0004802:20917-20936 Msa1341230:CDS 25.0%
! GAGTTCATATTTACAATGAA+AGG + tig0004802:21017-21036 Msa1341230:CDS 25.0%
! TCAGTATCATTGAATTTAGT+AGG - tig0004802:21167-21186 None:intergenic 25.0%
! AAATTCAATGATACTGATGT+TGG + tig0004802:21170-21189 Msa1341230:CDS 25.0%
! AATTCAATGATACTGATGTT+GGG + tig0004802:21171-21190 Msa1341230:CDS 25.0%
! TACTATATTGCCAAAATCTA+TGG + tig0004802:21220-21239 Msa1341230:CDS 25.0%
!!! TTCTTTCAACCTTGTTATTA+TGG + tig0004802:22406-22425 Msa1341230:intron 25.0%
! ATATTTAACCATGGATACAT+TGG - tig0004802:22593-22612 None:intergenic 25.0%
! ACAATAACATGAGTTTCATT+TGG + tig0004802:22754-22773 Msa1341230:intron 25.0%
!!! GAGATTTTGTTTTTCCATTT+TGG + tig0004802:22776-22795 Msa1341230:intron 25.0%
!! ACAAAACATATTTTATGCAG+GGG - tig0004802:23047-23066 None:intergenic 25.0%
!! GACAAAACATATTTTATGCA+GGG - tig0004802:23048-23067 None:intergenic 25.0%
! TTCACATTGTGGAAATAAAA+TGG + tig0004802:23178-23197 Msa1341230:intron 25.0%
! AGAAATTTAAATTAGGTGAG+AGG - tig0004802:23260-23279 None:intergenic 25.0%
! GAAGACGAGAAATTTAAATT+AGG - tig0004802:23267-23286 None:intergenic 25.0%
! AAGAAAGATTATATTTAGGG+TGG + tig0004802:23303-23322 Msa1341230:intron 25.0%
!!! AAGAACAAACTTGCTATATT+AGG - tig0004802:23336-23355 None:intergenic 25.0%
! ATGTGAAATATTATCACACA+TGG + tig0004802:23630-23649 Msa1341230:intron 25.0%
!! TTTTGAACAATTATGATTGG+TGG + tig0004802:24545-24564 Msa1341230:CDS 25.0%
!!! GTTTATTGGATTTTCTGAAA+AGG + tig0004802:24578-24597 Msa1341230:CDS 25.0%
! TTTACATATCAGTTATTGCA+GGG + tig0004802:24691-24710 Msa1341230:CDS 25.0%
! TTTGTATTTGTTTCAGAATG+AGG + tig0004802:24723-24742 Msa1341230:CDS 25.0%
! TTGTATTTGTTTCAGAATGA+GGG + tig0004802:24724-24743 Msa1341230:CDS 25.0%
! TATTGATGAGATAGTTAAGT+TGG + tig0004802:25017-25036 Msa1341230:CDS 25.0%
! TTATAAGCTAAAGAACAAGA+CGG - tig0004802:25228-25247 None:intergenic 25.0%
! GCTGCAAAGTTTATTAATAA+AGG - tig0004802:25685-25704 None:intergenic 25.0%
!! TTTTTGTCTTGGTTGAAATT+TGG + tig0004802:26288-26307 Msa1341230:intron 25.0%
! AAGCTATAAGTTGTTTACAT+AGG - tig0004802:26495-26514 None:intergenic 25.0%
!! ATTATGTTGTTTATCGAAAC+AGG + tig0004802:26602-26621 Msa1341230:intron 25.0%
!! TTTTTATGGTTGTTACTGTT+AGG + tig0004802:26674-26693 Msa1341230:intron 25.0%
! CTCATTGAAGAAGATTTATT+TGG - tig0004802:26813-26832 None:intergenic 25.0%
! CAAATAAATCTTCTTCAATG+AGG + tig0004802:26811-26830 Msa1341230:CDS 25.0%
GCTTCAAATTTCGAATTTGA+AGG + tig0004802:19530-19549 Msa1341230:five_prime_UTR 30.0%
TTAGTATGATTGTTGCTAAG+AGG - tig0004802:19623-19642 None:intergenic 30.0%
TTTCAAATCGAGTGTGATAA+GGG + tig0004802:20195-20214 Msa1341230:intron 30.0%
AATACCCTTGTAACCTTAAT+TGG - tig0004802:20423-20442 None:intergenic 30.0%
! TTTAAATGGTTGTTGCTGTT+AGG + tig0004802:20774-20793 Msa1341230:intron 30.0%
! GTAATGTTTGCTTTGAACTT+AGG - tig0004802:20834-20853 None:intergenic 30.0%
GATCCTATGATTCAAATTAC+TGG + tig0004802:20916-20935 Msa1341230:CDS 30.0%
CTAATGTATTGAATTGTCAG+AGG + tig0004802:21117-21136 Msa1341230:CDS 30.0%
GTATCATTGAATTTAGTAGG+AGG - tig0004802:21164-21183 None:intergenic 30.0%
! TTACTAGGATCCATAGATTT+TGG - tig0004802:21233-21252 None:intergenic 30.0%
AATCTCGAAATAGACTTACT+AGG - tig0004802:21248-21267 None:intergenic 30.0%
!!! GCCATTACAGTTTTGTTTAA+CGG - tig0004802:21425-21444 None:intergenic 30.0%
TGTCAGATTATAATAAAGGC+TGG + tig0004802:21753-21772 Msa1341230:CDS 30.0%
!! ATTAACACCACCTATTTCTA+TGG - tig0004802:21897-21916 None:intergenic 30.0%
TACGATAATAATGCAAGGTT+TGG + tig0004802:21919-21938 Msa1341230:CDS 30.0%
ATAATAATGCAAGGTTTGGA+GGG + tig0004802:21923-21942 Msa1341230:CDS 30.0%
! TTATGTTCCATTCGATTTTG+CGG + tig0004802:22226-22245 Msa1341230:intron 30.0%
GTATGAATCAAATTCTATCC+AGG - tig0004802:22269-22288 None:intergenic 30.0%
AACAAGAATGAGAAATATCG+AGG + tig0004802:22306-22325 Msa1341230:intron 30.0%
TCTAATCTAGACATAAAGCA+TGG - tig0004802:22355-22374 None:intergenic 30.0%
TCTTCTGTACCATAATAACA+AGG - tig0004802:22418-22437 None:intergenic 30.0%
AAACTAAACCAATGTATCCA+TGG + tig0004802:22582-22601 Msa1341230:intron 30.0%
GAAGAAATTGACGTGATTAT+AGG + tig0004802:22856-22875 Msa1341230:intron 30.0%
! GAAATAATTTGCGCTATTTG+TGG + tig0004802:22920-22939 Msa1341230:intron 30.0%
! GGACAAAACATATTTTATGC+AGG - tig0004802:23049-23068 None:intergenic 30.0%
!! AGGAATTTGATTTGCATGTT+TGG + tig0004802:23104-23123 Msa1341230:intron 30.0%
ATGAGAGGTGAAAAATTGAA+AGG - tig0004802:23235-23254 None:intergenic 30.0%
ATGATGAAAAGAAACCAAAC+TGG + tig0004802:23777-23796 Msa1341230:intron 30.0%
CTACATCATAAAAACCAGTT+TGG - tig0004802:23794-23813 None:intergenic 30.0%
!!! ACTGGTTTTTATGATGTAGT+TGG + tig0004802:23795-23814 Msa1341230:intron 30.0%
!! ACTTTGAGTATTTTTGCTTC+AGG + tig0004802:23945-23964 Msa1341230:CDS 30.0%
TGACCTTGAAACAAAATTTG+TGG - tig0004802:24017-24036 None:intergenic 30.0%
AAGAAGAAGAAGAAGAAAAG+GGG - tig0004802:24087-24106 None:intergenic 30.0%
GAAGAAGAAGAAGAAGAAAA+GGG - tig0004802:24088-24107 None:intergenic 30.0%
AGAAGAAGAAGAAGAAGAAA+AGG - tig0004802:24089-24108 None:intergenic 30.0%
! AATCCACAGTAGACTTTTAA+GGG - tig0004802:24256-24275 None:intergenic 30.0%
AAAAACCATCAGAACAATCT+TGG + tig0004802:24471-24490 Msa1341230:CDS 30.0%
AAAACCATCAGAACAATCTT+GGG + tig0004802:24472-24491 Msa1341230:CDS 30.0%
! GTGGAAAGAGTTTAGTTTAT+TGG + tig0004802:24564-24583 Msa1341230:CDS 30.0%
AAGAGATTAGAATCTGAACA+AGG + tig0004802:24652-24671 Msa1341230:CDS 30.0%
TGAACAAGGAATGAGTTATA+CGG + tig0004802:24666-24685 Msa1341230:CDS 30.0%
GTTTACATATCAGTTATTGC+AGG + tig0004802:24690-24709 Msa1341230:CDS 30.0%
! AGGGTGTTAATGTTCAAATT+GGG + tig0004802:24743-24762 Msa1341230:CDS 30.0%
AAAAGCGATGGTACAAAATT+CGG + tig0004802:24868-24887 Msa1341230:CDS 30.0%
TGGTACAAAATTCGGTAAAT+CGG + tig0004802:24876-24895 Msa1341230:CDS 30.0%
AAACTTGTATGGAGATAACA+TGG - tig0004802:24929-24948 None:intergenic 30.0%
TATAAGCTAAAGAACAAGAC+GGG - tig0004802:25227-25246 None:intergenic 30.0%
!!! TGAAGTTTTGAATCAGTCAT+TGG + tig0004802:25248-25267 Msa1341230:CDS 30.0%
GAGTAGATAGTGAAAATAAG+AGG + tig0004802:25361-25380 Msa1341230:CDS 30.0%
TAGTGAAAATAAGAGGATTG+AGG + tig0004802:25368-25387 Msa1341230:CDS 30.0%
! TAAAGTTCTCCTTTTATCTG+CGG + tig0004802:25410-25429 Msa1341230:CDS 30.0%
GTAAACATACTAGTTGGAAA+GGG - tig0004802:25579-25598 None:intergenic 30.0%
AGTAAACATACTAGTTGGAA+AGG - tig0004802:25580-25599 None:intergenic 30.0%
TTTCCAACTAGTATGTTTAC+TGG + tig0004802:25579-25598 Msa1341230:intron 30.0%
TTACCAGTAAACATACTAGT+TGG - tig0004802:25585-25604 None:intergenic 30.0%
CTAGTATGTTTACTGGTAAA+TGG + tig0004802:25586-25605 Msa1341230:intron 30.0%
! ATGCCAATTTTTCTTTTGCT+TGG + tig0004802:25610-25629 Msa1341230:intron 30.0%
ACACCAAGCAAAAGAAAAAT+TGG - tig0004802:25616-25635 None:intergenic 30.0%
ATAGACACTCCAAAAATTAG+GGG - tig0004802:25711-25730 None:intergenic 30.0%
GATAGACACTCCAAAAATTA+GGG - tig0004802:25712-25731 None:intergenic 30.0%
TGATAGACACTCCAAAAATT+AGG - tig0004802:25713-25732 None:intergenic 30.0%
CATCAACTACTCAATGTTAT+TGG - tig0004802:25865-25884 None:intergenic 30.0%
!!! CTGTTTTAGAGAACATACAA+AGG + tig0004802:26466-26485 Msa1341230:intron 30.0%
CTATAAGTTGTTTACATAGG+TGG - tig0004802:26492-26511 None:intergenic 30.0%
CTTATAGCTTATACCGAAAA+TGG + tig0004802:26505-26524 Msa1341230:intron 30.0%
GGCATAAGTTCTTATCATAT+AGG - tig0004802:26571-26590 None:intergenic 30.0%
ATCGAAACAGGAACTTAATT+TGG + tig0004802:26614-26633 Msa1341230:intron 30.0%
TTGTTACTGTTAGGTAAGAA+TGG + tig0004802:26683-26702 Msa1341230:intron 30.0%
TGTTACTGTTAGGTAAGAAT+GGG + tig0004802:26684-26703 Msa1341230:intron 30.0%
! AGGAGTAGTTTTCTTTTCAT+CGG - tig0004802:26759-26778 None:intergenic 30.0%
ATAAATCTTCTTCAATGAGG+AGG + tig0004802:26814-26833 Msa1341230:CDS 30.0%
AAAATCCCAAACAGACACTA+CGG + tig0004802:19557-19576 Msa1341230:five_prime_UTR 35.0%
TATGATTGTTGCTAAGAGGA+TGG - tig0004802:19619-19638 None:intergenic 35.0%
TTCATCTGTCAAAAAACCAC+CGG + tig0004802:20074-20093 Msa1341230:CDS 35.0%
GTTTCAAATCGAGTGTGATA+AGG + tig0004802:20194-20213 Msa1341230:intron 35.0%
! TTGTTGCTGTTAGGTAAGAA+TGG + tig0004802:20783-20802 Msa1341230:intron 35.0%
! TGTTGCTGTTAGGTAAGAAT+GGG + tig0004802:20784-20803 Msa1341230:intron 35.0%
TGCCCAGTAATTTGAATCAT+AGG - tig0004802:20922-20941 None:intergenic 35.0%
!! GATGCTTCTGGTTGTATTTT+TGG + tig0004802:21059-21078 Msa1341230:CDS 35.0%
!!! GGTTGTATTTTTGGTAAGCA+AGG + tig0004802:21068-21087 Msa1341230:CDS 35.0%
ATGTATTGAATTGTCAGAGG+AGG + tig0004802:21120-21139 Msa1341230:CDS 35.0%
AGTAGGAGGAAGATCAATAA+TGG - tig0004802:21150-21169 None:intergenic 35.0%
TATTTCGAGATTCCAAATGC+AGG + tig0004802:21256-21275 Msa1341230:CDS 35.0%
GCCGTTAAACAAAACTGTAA+TGG + tig0004802:21421-21440 Msa1341230:CDS 35.0%
ACAAAACTGTAATGGCAAGT+TGG + tig0004802:21429-21448 Msa1341230:CDS 35.0%
! AAGGGTCACACTTTTCAATT+GGG + tig0004802:21781-21800 Msa1341230:CDS 35.0%
GATAATAATGCAAGGTTTGG+AGG + tig0004802:21922-21941 Msa1341230:CDS 35.0%
TACCTTGTTGGAGAAACAAA+TGG + tig0004802:21953-21972 Msa1341230:CDS 35.0%
TTCACAAAGAAAACTACTCC+TGG + tig0004802:22031-22050 Msa1341230:CDS 35.0%
CCATTGAAGAAGACTTTCTT+GGG - tig0004802:22088-22107 None:intergenic 35.0%
CCAAGAAAGTCTTCTTCAAT+GGG + tig0004802:22086-22105 Msa1341230:CDS 35.0%
CAAGAAAGTCTTCTTCAATG+GGG + tig0004802:22087-22106 Msa1341230:CDS 35.0%
!! TAGAAGCATCAAAGTAGCAA+AGG - tig0004802:22170-22189 None:intergenic 35.0%
! TCGTCTTCTTGTTATAGTAG+TGG + tig0004802:22203-22222 Msa1341230:intron 35.0%
!! TCATTCTTGTTTCTGTGACA+AGG - tig0004802:22297-22316 None:intergenic 35.0%
! GCAAATTATTTCTTCCTGGA+TGG - tig0004802:22912-22931 None:intergenic 35.0%
! TAGCGCAAATTATTTCTTCC+TGG - tig0004802:22916-22935 None:intergenic 35.0%
! TAATTTGCGCTATTTGTGGT+CGG + tig0004802:22924-22943 Msa1341230:intron 35.0%
!!! GGAATTTTTTTTTTGGTCCC+TGG + tig0004802:22965-22984 Msa1341230:intron 35.0%
AGAACTCACACAGTTAAATG+TGG + tig0004802:22990-23009 Msa1341230:intron 35.0%
ACAGTTAAATGTGGAGAAGT+GGG + tig0004802:22999-23018 Msa1341230:intron 35.0%
CATGAGATTGTTTCACATTG+TGG + tig0004802:23167-23186 Msa1341230:intron 35.0%
ATCGTTCTCTTACAAAGCAT+CGG - tig0004802:23587-23606 None:intergenic 35.0%
GCGATTTCATAACTTGAGTA+GGG + tig0004802:23700-23719 Msa1341230:intron 35.0%
CGATTTCATAACTTGAGTAG+GGG + tig0004802:23701-23720 Msa1341230:intron 35.0%
!! TTGTGTTGATGATGATGTTG+GGG - tig0004802:23988-24007 None:intergenic 35.0%
!! GTTGTGTTGATGATGATGTT+GGG - tig0004802:23989-24008 None:intergenic 35.0%
!! TGTTGTGTTGATGATGATGT+TGG - tig0004802:23990-24009 None:intergenic 35.0%
CATCATCATCAACACAACAA+TGG + tig0004802:23991-24010 Msa1341230:CDS 35.0%
!! TGGCCACAAATTTTGTTTCA+AGG + tig0004802:24011-24030 Msa1341230:CDS 35.0%
AGAAGAAGAAGAAGAAAAGG+GGG - tig0004802:24086-24105 None:intergenic 35.0%
! GAATCCACAGTAGACTTTTA+AGG - tig0004802:24257-24276 None:intergenic 35.0%
CTTGCATTTGGGCAATTTAT+TGG + tig0004802:24294-24313 Msa1341230:CDS 35.0%
GCTCAAAATCATCCAAACTT+TGG + tig0004802:24499-24518 Msa1341230:CDS 35.0%
!! TTGGATTTTCTGAAAAGGGT+TGG + tig0004802:24583-24602 Msa1341230:CDS 35.0%
! GTTGGTAAATATGCTAGAGT+AGG + tig0004802:24601-24620 Msa1341230:CDS 35.0%
!! GAGGGTGTTAATGTTCAAAT+TGG + tig0004802:24742-24761 Msa1341230:CDS 35.0%
GGGTGTTAATGTTCAAATTG+GGG + tig0004802:24744-24763 Msa1341230:CDS 35.0%
GGTGTTAATGTTCAAATTGG+GGG + tig0004802:24745-24764 Msa1341230:CDS 35.0%
GTTGATTAGGAAGATATTGC+AGG + tig0004802:24804-24823 Msa1341230:CDS 35.0%
AAGAGGAAATGTCAAACCAT+AGG - tig0004802:24842-24861 None:intergenic 35.0%
TACAAAATTCGGTAAATCGG+AGG + tig0004802:24879-24898 Msa1341230:CDS 35.0%
TTGTATGGAGATAACATGGA+CGG - tig0004802:24925-24944 None:intergenic 35.0%
!!! TCAGTATTTTTTCTCGGTTC+CGG + tig0004802:24951-24970 Msa1341230:CDS 35.0%
! GAAGTTACTCGATTTGTTCA+CGG + tig0004802:25099-25118 Msa1341230:CDS 35.0%
! TTGGACTGGAAAACAATTGA+GGG + tig0004802:25186-25205 Msa1341230:CDS 35.0%
! GTTGATCTTTCTGTTTCTTC+TGG + tig0004802:25270-25289 Msa1341230:CDS 35.0%
! AAAGTTCTCCTTTTATCTGC+GGG + tig0004802:25411-25430 Msa1341230:CDS 35.0%
!!! TCTTTTTTCCCGCAGATAAA+AGG - tig0004802:25422-25441 None:intergenic 35.0%
ATCTGCGGGAAAAAAGAATA+AGG + tig0004802:25425-25444 Msa1341230:CDS 35.0%
CCAATGTCATGAAAGCTATT+CGG - tig0004802:25643-25662 None:intergenic 35.0%
!! AACGTTGATTCGAATCAGTA+GGG - tig0004802:26030-26049 None:intergenic 35.0%
TCTGATGACTACTGTTGAAA+CGG + tig0004802:26217-26236 Msa1341230:CDS 35.0%
!! GTGATGTTTGATTTGGACTT+GGG - tig0004802:26734-26753 None:intergenic 35.0%
!! AGTGATGTTTGATTTGGACT+TGG - tig0004802:26735-26754 None:intergenic 35.0%
ATCGGTAGTGATGTTTGATT+TGG - tig0004802:26741-26760 None:intergenic 35.0%
GATGAAAAGAAAACTACTCC+TGG + tig0004802:26758-26777 Msa1341230:CDS 35.0%
AAGAAAACTACTCCTGGAAT+CGG + tig0004802:22037-22056 Msa1341230:CDS 35.0%
!! AAGGTTGATTCGAATCGGTA+GGG - tig0004802:19753-19772 None:intergenic 40.0%
!! TAAGGTTGATTCGAATCGGT+AGG - tig0004802:19754-19773 None:intergenic 40.0%
!! CGCTTAAGGTTGATTCGAAT+CGG - tig0004802:19758-19777 None:intergenic 40.0%
TCTGAAGACTGCTGTTGAAA+CGG + tig0004802:19941-19960 Msa1341230:CDS 40.0%
!!! AGTCTTGTTGGGACTGTTTT+TGG + tig0004802:19996-20015 Msa1341230:CDS 40.0%
! TTAGCAAGCTTGATCGACTT+CGG - tig0004802:20047-20066 None:intergenic 40.0%
!! TCGATCAAGCTTGCTAATGA+TGG + tig0004802:20050-20069 Msa1341230:CDS 40.0%
ATAAGCTCGTGAGAATGTGA+CGG + tig0004802:20482-20501 Msa1341230:intron 40.0%
!! GTAAGATCACCATTTTGACG+CGG - tig0004802:20876-20895 None:intergenic 40.0%
TGATTCAAATTACTGGGCAG+AGG + tig0004802:20923-20942 Msa1341230:CDS 40.0%
ATCGGTAACCAAAATCCTCT+CGG + tig0004802:20951-20970 Msa1341230:CDS 40.0%
! TTGATAATTGGAGGTTGAGC+TGG + tig0004802:20979-20998 Msa1341230:CDS 40.0%
TGATAATTGGAGGTTGAGCT+GGG + tig0004802:20980-20999 Msa1341230:CDS 40.0%
GGAGGAAGATCAATAATGGT+AGG - tig0004802:21146-21165 None:intergenic 40.0%
GGAAAATTCCTTCTTGTTGC+CGG + tig0004802:21192-21211 Msa1341230:CDS 40.0%
TTGGCAATATAGTACCGTTC+CGG - tig0004802:21214-21233 None:intergenic 40.0%
! GCATTTTGTACACCTGCATT+TGG - tig0004802:21271-21290 None:intergenic 40.0%
CTTAACCCTGACTACAAATG+CGG + tig0004802:21350-21369 Msa1341230:CDS 40.0%
TGTAACATTACAGCAGCCAA+GGG + tig0004802:21461-21480 Msa1341230:CDS 40.0%
GCATTTACTTGATGTTCCCT+TGG - tig0004802:21480-21499 None:intergenic 40.0%
! ATGTTCTTGCTGTAGTCTTG+GGG - tig0004802:21568-21587 None:intergenic 40.0%
! CATGTTCTTGCTGTAGTCTT+GGG - tig0004802:21569-21588 None:intergenic 40.0%
! ACATGTTCTTGCTGTAGTCT+TGG - tig0004802:21570-21589 None:intergenic 40.0%
AAAAGGAACAAGGACAGCAT+CGG - tig0004802:21624-21643 None:intergenic 40.0%
TTCGGTTCTCAAAAGGAACA+AGG - tig0004802:21634-21653 None:intergenic 40.0%
ATAATAAAGGCTGGAGTGCA+AGG + tig0004802:21762-21781 Msa1341230:CDS 40.0%
TAATAAAGGCTGGAGTGCAA+GGG + tig0004802:21763-21782 Msa1341230:CDS 40.0%
! CAAGGGTCACACTTTTCAAT+TGG + tig0004802:21780-21799 Msa1341230:CDS 40.0%
! AGGGTCACACTTTTCAATTG+GGG + tig0004802:21782-21801 Msa1341230:CDS 40.0%
! GTGAGACTAATTTTGCAGAC+TGG + tig0004802:21804-21823 Msa1341230:CDS 40.0%
AATGCAAGCGCCATAGAAAT+AGG + tig0004802:21884-21903 Msa1341230:CDS 40.0%
! CTCCATTTGTTTCTCCAACA+AGG - tig0004802:21958-21977 None:intergenic 40.0%
!! ATTACTGACTGTTGTTTCCC+AGG - tig0004802:22007-22026 None:intergenic 40.0%
CCCAAGAAAGTCTTCTTCAA+TGG + tig0004802:22085-22104 Msa1341230:CDS 40.0%
CCCATTGAAGAAGACTTTCT+TGG - tig0004802:22089-22108 None:intergenic 40.0%
AGCAAAGGAAAATTCCTTCC+TGG - tig0004802:22155-22174 None:intergenic 40.0%
! GTTCAGGATTTCTGTTTTCC+TGG + tig0004802:22248-22267 Msa1341230:intron 40.0%
AACATTTACGTGTTCCATCC+AGG + tig0004802:22895-22914 Msa1341230:intron 40.0%
AATTTGCGCTATTTGTGGTC+GGG + tig0004802:22925-22944 Msa1341230:intron 40.0%
CGGGAATCTGGAGAAATTTA+AGG + tig0004802:22944-22963 Msa1341230:intron 40.0%
CACAGTTAAATGTGGAGAAG+TGG + tig0004802:22998-23017 Msa1341230:intron 40.0%
CAGTTAAATGTGGAGAAGTG+GGG + tig0004802:23000-23019 Msa1341230:intron 40.0%
! AACATATTTTATGCAGGGGC+CGG - tig0004802:23043-23062 None:intergenic 40.0%
AGCTCACAGGACGAAATTTA+AGG + tig0004802:23084-23103 Msa1341230:intron 40.0%
ATTAGGTGAGAGGATATGAG+AGG - tig0004802:23250-23269 None:intergenic 40.0%
! AAGAGAACGATTGCTATTGC+AGG + tig0004802:23596-23615 Msa1341230:intron 40.0%
ATTATCACACATGGTGTCTC+TGG + tig0004802:23639-23658 Msa1341230:intron 40.0%
TGCAATTGTGCATGCTCTTA+TGG + tig0004802:23678-23697 Msa1341230:intron 40.0%
GGCGATTTCATAACTTGAGT+AGG + tig0004802:23699-23718 Msa1341230:intron 40.0%
!! TGTGTTGATGATGATGTTGG+GGG - tig0004802:23987-24006 None:intergenic 40.0%
GAATGGAAAGGTGAAAAGCT+TGG - tig0004802:24059-24078 None:intergenic 40.0%
GAAGAAGAAGAAGAAAAGGG+GGG - tig0004802:24085-24104 None:intergenic 40.0%
! TTTCAAGGCTTTTCCCTGAT+GGG - tig0004802:24402-24421 None:intergenic 40.0%
! AAAGTCTCAACGTCAAGTTG+AGG - tig0004802:24427-24446 None:intergenic 40.0%
TCAACTTGACGTTGAGACTT+TGG + tig0004802:24426-24445 Msa1341230:CDS 40.0%
TGCTAGAGTAGGTTCAATGA+TGG + tig0004802:24612-24631 Msa1341230:CDS 40.0%
!! TGATGGCTAAAGAGAGTGTT+AGG + tig0004802:24629-24648 Msa1341230:CDS 40.0%
AAATTGGGGGTAGTGATCAA+TGG + tig0004802:24758-24777 Msa1341230:CDS 40.0%
AATTGGGGGTAGTGATCAAT+GGG + tig0004802:24759-24778 Msa1341230:CDS 40.0%
CAATGGGGTAATATAACTGC+TGG + tig0004802:24775-24794 Msa1341230:CDS 40.0%
AGGAAGATATTGCAGGTAGA+AGG + tig0004802:24811-24830 Msa1341230:CDS 40.0%
AAGATATTGCAGGTAGAAGG+TGG + tig0004802:24814-24833 Msa1341230:CDS 40.0%
!! CCATCGCTTTTCAACAAAAG+AGG - tig0004802:24859-24878 None:intergenic 40.0%
! CCTCTTTTGTTGAAAAGCGA+TGG + tig0004802:24856-24875 Msa1341230:CDS 40.0%
AAATTCGGTAAATCGGAGGA+TGG + tig0004802:24883-24902 Msa1341230:CDS 40.0%
AACCTAACAACATCAGCATC+CGG - tig0004802:24973-24992 None:intergenic 40.0%
! GTTGGACTGGAAAACAATTG+AGG + tig0004802:25185-25204 Msa1341230:CDS 40.0%
! TGGACTGGAAAACAATTGAG+GGG + tig0004802:25187-25206 Msa1341230:CDS 40.0%
GGGAAAAAAGAATAAGGTGC+TGG + tig0004802:25431-25450 Msa1341230:intron 40.0%
CTGTGTAGCAGCAAAATCAA+AGG - tig0004802:25543-25562 None:intergenic 40.0%
ATGTCATGAAAGCTATTCGG+TGG - tig0004802:25640-25659 None:intergenic 40.0%
CCGAATAGCTTTCATGACAT+TGG + tig0004802:25640-25659 Msa1341230:intron 40.0%
! CATTGGTGACATCTGTTACT+TGG + tig0004802:25657-25676 Msa1341230:intron 40.0%
ATCAGTAGGGTTGCTTCTTT+GGG - tig0004802:26017-26036 None:intergenic 40.0%
AATCAGTAGGGTTGCTTCTT+TGG - tig0004802:26018-26037 None:intergenic 40.0%
!! CAACGTTGATTCGAATCAGT+AGG - tig0004802:26031-26050 None:intergenic 40.0%
GTCTCAATGAACTCAAGTCA+TGG + tig0004802:26067-26086 Msa1341230:intron 40.0%
AGACAAAAACAGTCCCAACA+AGG - tig0004802:26277-26296 None:intergenic 40.0%
!!! TGTTGGGACTGTTTTTGTCT+TGG + tig0004802:26277-26296 Msa1341230:intron 40.0%
TTACCTAAGCACTTGTGAGA+AGG + tig0004802:26402-26421 Msa1341230:intron 40.0%
ATCGGTAGGGTTGCTTCTTT+GGG - tig0004802:19740-19759 None:intergenic 45.0%
AATCGGTAGGGTTGCTTCTT+TGG - tig0004802:19741-19760 None:intergenic 45.0%
ACCTTAAGCGTGCTCAACAA+CGG + tig0004802:19768-19787 Msa1341230:CDS 45.0%
GTCTCGATGAACTCAAGTCA+TGG + tig0004802:19790-19809 Msa1341230:CDS 45.0%
CTGTGGAAAACCAGCGAAAA+CGG - tig0004802:19916-19935 None:intergenic 45.0%
!!! TTTCGCTGGTTTTCCACAGA+CGG + tig0004802:19917-19936 Msa1341230:CDS 45.0%
TGGTGATTTGACTCAGATGC+AGG + tig0004802:19965-19984 Msa1341230:CDS 45.0%
!! AGGCTCAGGTTAGTCTTGTT+GGG + tig0004802:19985-20004 Msa1341230:CDS 45.0%
!!! TGTTGGGACTGTTTTTGGTG+TGG + tig0004802:20001-20020 Msa1341230:CDS 45.0%
TGTCAAAAAACCACCGGTCA+AGG + tig0004802:20080-20099 Msa1341230:CDS 45.0%
!! GGAAAAGAAGGTACCTTGAC+CGG - tig0004802:20096-20115 None:intergenic 45.0%
! CTGTTTGGATCGACTCATTG+AGG + tig0004802:20242-20261 Msa1341230:intron 45.0%
AAGTTTCTGCCGCGTCAAAA+TGG + tig0004802:20864-20883 Msa1341230:CDS 45.0%
GTAACCAAAATCCTCTCGGA+AGG + tig0004802:20955-20974 Msa1341230:CDS 45.0%
CAATTATCAAGCCTTCCGAG+AGG - tig0004802:20969-20988 None:intergenic 45.0%
! CTCTCGGAAGGCTTGATAAT+TGG + tig0004802:20967-20986 Msa1341230:CDS 45.0%
! TCGGAAGGCTTGATAATTGG+AGG + tig0004802:20970-20989 Msa1341230:CDS 45.0%
ATTCCTTCTTGTTGCCGGAA+CGG + tig0004802:21197-21216 Msa1341230:CDS 45.0%
CTAATCTTCCAGTTCTGTGG+TGG - tig0004802:21323-21342 None:intergenic 45.0%
CCACTAATCTTCCAGTTCTG+TGG - tig0004802:21326-21345 None:intergenic 45.0%
CCACAGAACTGGAAGATTAG+TGG + tig0004802:21323-21342 Msa1341230:CDS 45.0%
TCAGTAGGACTAACACGAAC+CGG - tig0004802:21380-21399 None:intergenic 45.0%
GTTGGATCTGGATTCTCAGT+AGG - tig0004802:21395-21414 None:intergenic 45.0%
ACTGAGAATCCAGATCCAAC+AGG + tig0004802:21395-21414 Msa1341230:CDS 45.0%
CTGAGAATCCAGATCCAACA+GGG + tig0004802:21396-21415 Msa1341230:CDS 45.0%
TTGTTTAACGGCAACCCTGT+TGG - tig0004802:21413-21432 None:intergenic 45.0%
! AACTGTAATGGCAAGTTGGC+AGG + tig0004802:21433-21452 Msa1341230:CDS 45.0%
GTGTAACATTACAGCAGCCA+AGG + tig0004802:21460-21479 Msa1341230:CDS 45.0%
TTGGCAGTTCGGTTCTCAAA+AGG - tig0004802:21641-21660 None:intergenic 45.0%
!! TTTTGAGAACCGAACTGCCA+AGG + tig0004802:21640-21659 Msa1341230:CDS 45.0%
CTGGTTTACTGCTGTGCAAA+TGG + tig0004802:21823-21842 Msa1341230:CDS 45.0%
GAGGGATTGAACTACCTTGT+TGG + tig0004802:21941-21960 Msa1341230:CDS 45.0%
TAACCCTCGTACAGATCCTA+GGG + tig0004802:21979-21998 Msa1341230:CDS 45.0%
GAAAGTCTTCTTCAATGGGG+AGG + tig0004802:22090-22109 Msa1341230:CDS 45.0%
AAGAAGACGACTAGCAACAG+TGG - tig0004802:22193-22212 None:intergenic 45.0%
! TCCATTCGATTTTGCGGTTC+AGG + tig0004802:22232-22251 Msa1341230:intron 45.0%
TCCTGAACCGCAAAATCGAA+TGG - tig0004802:22236-22255 None:intergenic 45.0%
AAATATCGAGGACTGAGTCG+CGG + tig0004802:22318-22337 Msa1341230:intron 45.0%
! ACGTGAGAAGTGCAAGATTG+TGG + tig0004802:22559-22578 Msa1341230:intron 45.0%
! AACTGTGTGAGTTCTAGCCA+GGG - tig0004802:22985-23004 None:intergenic 45.0%
! TAACTGTGTGAGTTCTAGCC+AGG - tig0004802:22986-23005 None:intergenic 45.0%
TGAGCTGAGCTCAATTGGTA+GGG - tig0004802:23070-23089 None:intergenic 45.0%
GTGTCTCTGGCAGAAAACTA+TGG + tig0004802:23652-23671 Msa1341230:intron 45.0%
! ATGATGATGTTGGGGGTTTG+AGG - tig0004802:23980-23999 None:intergenic 45.0%
TGGAAAGGTGAAAAGCTTGG+CGG - tig0004802:24056-24075 None:intergenic 45.0%
AAAGGGGGGTTTGAATGGAA+AGG - tig0004802:24071-24090 None:intergenic 45.0%
GAAGAAAAGGGGGGTTTGAA+TGG - tig0004802:24076-24095 None:intergenic 45.0%
TGCAGGTTGTTCGAGAAAAG+GGG - tig0004802:24120-24139 None:intergenic 45.0%
GTGCAGGTTGTTCGAGAAAA+GGG - tig0004802:24121-24140 None:intergenic 45.0%
AGTGCAGGTTGTTCGAGAAA+AGG - tig0004802:24122-24141 None:intergenic 45.0%
CAACAACCTCCGAATGTCAT+CGG + tig0004802:24151-24170 Msa1341230:CDS 45.0%
TCGAGGATTCCGATGACATT+CGG - tig0004802:24163-24182 None:intergenic 45.0%
ATCGGAATCCTCGAACAAAG+AGG + tig0004802:24169-24188 Msa1341230:CDS 45.0%
TCGGAATCCTCGAACAAAGA+GGG + tig0004802:24170-24189 Msa1341230:CDS 45.0%
!! GACTTTTAAGGGTGCGTTGA+TGG - tig0004802:24245-24264 None:intergenic 45.0%
GCACCCTTAAAAGTCTACTG+TGG + tig0004802:24250-24269 Msa1341230:CDS 45.0%
ATTGCCCAAATGCAAGCTCT+GGG - tig0004802:24290-24309 None:intergenic 45.0%
AATTGCCCAAATGCAAGCTC+TGG - tig0004802:24291-24310 None:intergenic 45.0%
TGGCTCTCATTGTTCTCTCA+TGG + tig0004802:24314-24333 Msa1341230:CDS 45.0%
! CATAACGTCGTCGCATTGAT+CGG + tig0004802:24352-24371 Msa1341230:CDS 45.0%
! CTTTCAAGGCTTTTCCCTGA+TGG - tig0004802:24403-24422 None:intergenic 45.0%
!! CGTCAAGTTGAGGTCTTTCA+AGG - tig0004802:24417-24436 None:intergenic 45.0%
! TTGACGTTGAGACTTTGGAG+AGG + tig0004802:24431-24450 Msa1341230:CDS 45.0%
! ACTTTGGAGAGGAACACTGT+TGG + tig0004802:24442-24461 Msa1341230:CDS 45.0%
! CTTTGGAGAGGAACACTGTT+GGG + tig0004802:24443-24462 Msa1341230:CDS 45.0%
ACGACCCAAGATTGTTCTGA+TGG - tig0004802:24479-24498 None:intergenic 45.0%
ATTGGGGGTAGTGATCAATG+GGG + tig0004802:24760-24779 Msa1341230:CDS 45.0%
!! CTGCTGGAACTGAGTTGATT+AGG + tig0004802:24791-24810 Msa1341230:CDS 45.0%
AATCGGAGGATGGTGCAATT+TGG + tig0004802:24893-24912 Msa1341230:CDS 45.0%
TTCCGGATGCTGATGTTGTT+AGG + tig0004802:24968-24987 Msa1341230:CDS 45.0%
GAAGAAGAGATGAAGAAGCC+TGG + tig0004802:25039-25058 Msa1341230:CDS 45.0%
GCATTGTTAGGCACATATCC+AGG - tig0004802:25060-25079 None:intergenic 45.0%
TGCCTAACAATGCTCAGTGT+AGG + tig0004802:25067-25086 Msa1341230:CDS 45.0%
! AGCCTACACTGAGCATTGTT+AGG - tig0004802:25072-25091 None:intergenic 45.0%
! CGATTTGTTCACGGAGAAGA+TGG + tig0004802:25108-25127 Msa1341230:CDS 45.0%
ATGGTTTGAGCGAAGCTCTT+AGG + tig0004802:25127-25146 Msa1341230:CDS 45.0%
TGGTTTGAGCGAAGCTCTTA+GGG + tig0004802:25128-25147 Msa1341230:CDS 45.0%
TCCAACTTTGTCTCAGATCC+CGG - tig0004802:25171-25190 None:intergenic 45.0%
! GATCTGAGACAAAGTTGGAC+TGG + tig0004802:25172-25191 Msa1341230:CDS 45.0%
AACAATTGAGGGGATTGCTG+AGG + tig0004802:25197-25216 Msa1341230:CDS 45.0%
ACAGCAAATCTGCTTCACGT+CGG + tig0004802:25301-25320 Msa1341230:CDS 45.0%
! TCACGTCGGTTGTTAAAGCA+AGG + tig0004802:25315-25334 Msa1341230:CDS 45.0%
GATTGAGGCAGCTGATATAG+TGG + tig0004802:25383-25402 Msa1341230:CDS 45.0%
GCTGGTACGAATAGCATGAT+AGG + tig0004802:25449-25468 Msa1341230:intron 45.0%
! TGCAGCTGTCCCCTAATTTT+TGG + tig0004802:25699-25718 Msa1341230:intron 45.0%
!! GCACGATTGAGCATTGGTAA+AGG - tig0004802:25935-25954 None:intergenic 45.0%
ACCAATGCTCAATCGTGCAA+TGG + tig0004802:25937-25956 Msa1341230:intron 45.0%
ACCATTGCACGATTGAGCAT+TGG - tig0004802:25941-25960 None:intergenic 45.0%
AAGTCATGGAAAGTCGCTGT+CGG + tig0004802:26081-26100 Msa1341230:intron 45.0%
TGCTTCCAATGCTATTCTCG+AGG + tig0004802:26131-26150 Msa1341230:intron 45.0%
TCCAATGCTATTCTCGAGGA+CGG + tig0004802:26135-26154 Msa1341230:intron 45.0%
ATGACTACTGTTGAAACGGC+TGG + tig0004802:26221-26240 Msa1341230:CDS 45.0%
! TGGTGATTTGAAGCAGATGC+AGG + tig0004802:26241-26260 Msa1341230:CDS 45.0%
!! AGGCTCAGATAAGCCTTGTT+GGG + tig0004802:26261-26280 Msa1341230:CDS 45.0%
CAACCTTCTCACAAGTGCTT+AGG - tig0004802:26408-26427 None:intergenic 45.0%
CACTTGTGAGAAGGTTGAAG+AGG + tig0004802:26411-26430 Msa1341230:intron 45.0%
ATCGGTATCGTTTGTGGTGA+CGG + tig0004802:26782-26801 Msa1341230:CDS 45.0%
!! AAAATCTAAAAAAAAAAAAA+AGG - tig0004802:20117-20136 None:intergenic 5.0%
!!! TTTTTTAGATTTTTTTTTTT+TGG + tig0004802:20124-20143 Msa1341230:intron 5.0%
!!! TTTATTTTAATCTTTTATTA+TGG + tig0004802:26535-26554 Msa1341230:intron 5.0%
!!! TATAATTAACTTTTTTTTTA+TGG + tig0004802:26660-26679 Msa1341230:intron 5.0%
CATCGCCGTAGTGTCTGTTT+GGG - tig0004802:19565-19584 None:intergenic 50.0%
TCATCGCCGTAGTGTCTGTT+TGG - tig0004802:19566-19585 None:intergenic 50.0%
GGATGGTGAAGAAGCTACAG+AGG - tig0004802:19602-19621 None:intergenic 50.0%
ACCGATGCACAATCGTGCAA+CGG + tig0004802:19657-19676 Msa1341230:CDS 50.0%
ACCGTTGCACGATTGTGCAT+CGG - tig0004802:19661-19680 None:intergenic 50.0%
GTCTCATACTCCTCTTCCGT+CGG + tig0004802:19687-19706 Msa1341230:CDS 50.0%
TTCTTTGGGTCGGTGACGTT+AGG - tig0004802:19726-19745 None:intergenic 50.0%
GTAGGGTTGCTTCTTTGGGT+CGG - tig0004802:19736-19755 None:intergenic 50.0%
ACCGTTGTTGAGCACGCTTA+AGG - tig0004802:19772-19791 None:intergenic 50.0%
TCCAATGCTGTTCTCGCTGA+CGG + tig0004802:19858-19877 Msa1341230:CDS 50.0%
!! AACGGTGCCGTTTCCAACTT+GGG - tig0004802:19898-19917 None:intergenic 50.0%
!! AAACGGTGCCGTTTCCAACT+TGG - tig0004802:19899-19918 None:intergenic 50.0%
AAGACTGCTGTTGAAACGGC+TGG + tig0004802:19945-19964 Msa1341230:CDS 50.0%
TTTGACTCAGATGCAGGCTC+AGG + tig0004802:19971-19990 Msa1341230:CDS 50.0%
!! CAGGCTCAGGTTAGTCTTGT+TGG + tig0004802:19984-20003 Msa1341230:CDS 50.0%
! AGCTTGATCGACTTCGGCAA+CGG - tig0004802:20041-20060 None:intergenic 50.0%
!! AAAGAAGGTACCTTGACCGG+TGG - tig0004802:20093-20112 None:intergenic 50.0%
TACTGGGCAGAGGTTACGAT+CGG + tig0004802:20933-20952 Msa1341230:CDS 50.0%
! CAAGCCTTCCGAGAGGATTT+TGG - tig0004802:20962-20981 None:intergenic 50.0%
AGGAGCTTATCCGTCTGTTC+TGG + tig0004802:21037-21056 Msa1341230:CDS 50.0%
!! CCAGAAGCATCCAGAACAGA+CGG - tig0004802:21050-21069 None:intergenic 50.0%
!! TCAGATCGGTTAAGCACTGG+CGG - tig0004802:21293-21312 None:intergenic 50.0%
AGCTCAGATCGGTTAAGCAC+TGG - tig0004802:21296-21315 None:intergenic 50.0%
! GTGGTGGTGAAAGCTCAGAT+CGG - tig0004802:21307-21326 None:intergenic 50.0%
AGCTTTCACCACCACAGAAC+TGG + tig0004802:21312-21331 Msa1341230:CDS 50.0%
GAGGACCGCATTTGTAGTCA+GGG - tig0004802:21358-21377 None:intergenic 50.0%
TGACTACAAATGCGGTCCTC+CGG + tig0004802:21358-21377 Msa1341230:CDS 50.0%
! CCACATGCACACGTTTTGCA+AGG - tig0004802:21542-21561 None:intergenic 50.0%
CCTTGCAAAACGTGTGCATG+TGG + tig0004802:21539-21558 Msa1341230:CDS 50.0%
ACGCATAAGCCTTGGCAGTT+CGG - tig0004802:21652-21671 None:intergenic 50.0%
AACTGCCAAGGCTTATGCGT+GGG + tig0004802:21652-21671 Msa1341230:CDS 50.0%
AGTTATCACCGCAAGGTGGT+GGG - tig0004802:21706-21725 None:intergenic 50.0%
CAAATGGACAAAGCAGCTGC+AGG + tig0004802:21839-21858 Msa1341230:CDS 50.0%
GCAAGCGCCATAGAAATAGG+TGG + tig0004802:21887-21906 Msa1341230:CDS 50.0%
CTAACCCTCGTACAGATCCT+AGG + tig0004802:21978-21997 Msa1341230:CDS 50.0%
!! CCACGAACAACACTGATTCC+AGG - tig0004802:22052-22071 None:intergenic 50.0%
! CCTGGAATCAGTGTTGTTCG+TGG + tig0004802:22049-22068 Msa1341230:CDS 50.0%
! GGAATCAGTGTTGTTCGTGG+TGG + tig0004802:22052-22071 Msa1341230:CDS 50.0%
! AGTGTTGTTCGTGGTGGTGA+CGG + tig0004802:22058-22077 Msa1341230:CDS 50.0%
! CCACTGGTTGGAAGTACAGA+AGG - tig0004802:22127-22146 None:intergenic 50.0%
CCTTCTGTACTTCCAACCAG+TGG + tig0004802:22124-22143 Msa1341230:CDS 50.0%
GCTATTTGTGGTCGGGAATC+TGG + tig0004802:22932-22951 Msa1341230:intron 50.0%
GTGAGCTGAGCTCAATTGGT+AGG - tig0004802:23071-23090 None:intergenic 50.0%
ACCAATTGAGCTCAGCTCAC+AGG + tig0004802:23071-23090 Msa1341230:intron 50.0%
TCCTGTGAGCTGAGCTCAAT+TGG - tig0004802:23075-23094 None:intergenic 50.0%
AGGTTGTTCGAGAAAAGGGG+AGG - tig0004802:24117-24136 None:intergenic 50.0%
!! TTGTTGGTGTTGGAGAGTGC+AGG - tig0004802:24137-24156 None:intergenic 50.0%
CATTCGGAGGTTGTTGGTGT+TGG - tig0004802:24147-24166 None:intergenic 50.0%
CGATGACATTCGGAGGTTGT+TGG - tig0004802:24153-24172 None:intergenic 50.0%
AGGATTCCGATGACATTCGG+AGG - tig0004802:24160-24179 None:intergenic 50.0%
CCAGTAACCCTCTTTGTTCG+AGG - tig0004802:24180-24199 None:intergenic 50.0%
CCTCGAACAAAGAGGGTTAC+TGG + tig0004802:24177-24196 Msa1341230:CDS 50.0%
!! AATGCAAGCTCTGGGCAGTT+GGG - tig0004802:24282-24301 None:intergenic 50.0%
!! AAATGCAAGCTCTGGGCAGT+TGG - tig0004802:24283-24302 None:intergenic 50.0%
AACTGCCCAGAGCTTGCATT+TGG + tig0004802:24282-24301 Msa1341230:CDS 50.0%
ACTGCCCAGAGCTTGCATTT+GGG + tig0004802:24283-24302 Msa1341230:CDS 50.0%
CGATCAATGCGACGACGTTA+TGG - tig0004802:24354-24373 None:intergenic 50.0%
CAGGTAGAAGGTGGTACCTA+TGG + tig0004802:24823-24842 Msa1341230:CDS 50.0%
! CGTCGGTTGTTAAAGCAAGG+AGG + tig0004802:25318-25337 Msa1341230:CDS 50.0%
! GAGGCAGCTGATATAGTGGA+TGG + tig0004802:25387-25406 Msa1341230:CDS 50.0%
! GGAGTGTCTATCATTGCAGC+AGG + tig0004802:25720-25739 Msa1341230:intron 50.0%
TTCTTTGGGTCGGTGACGTT+CGG - tig0004802:19726-19745 None:intergenic 50.0%
GTAGGGTTGCTTCTTTGGGT+CGG - tig0004802:19736-19755 None:intergenic 50.0%
AGTCATGGAAAGTCGCTGTC+GGG + tig0004802:26082-26101 Msa1341230:intron 50.0%
ACCGTCCTCGAGAATAGCAT+TGG - tig0004802:26139-26158 None:intergenic 50.0%
!! GAAAATGGTGCCGTTCCCAT+CGG - tig0004802:26178-26197 None:intergenic 50.0%
TCTGCGCAAACCAGCGAAAA+TGG - tig0004802:26193-26212 None:intergenic 50.0%
!!! TTTTCGCTGGTTTGCGCAGA+CGG + tig0004802:26193-26212 Msa1341230:intron 50.0%
! CAGGCTCAGATAAGCCTTGT+TGG + tig0004802:26260-26279 Msa1341230:CDS 50.0%
!! CCACAAACGATACCGATTCC+AGG - tig0004802:26779-26798 None:intergenic 50.0%
CCTGGAATCGGTATCGTTTG+TGG + tig0004802:26776-26795 Msa1341230:CDS 50.0%
TCGGTATCGTTTGTGGTGAC+GGG + tig0004802:26783-26802 Msa1341230:CDS 50.0%
CAGTTGAACTCCGACGGAAG+AGG - tig0004802:19700-19719 None:intergenic 55.0%
TTTGGGTCGGTGACGTTAGG+CGG - tig0004802:19723-19742 None:intergenic 55.0%
CTCGTCGTGCTGAAACTCGA+CGG - tig0004802:19823-19842 None:intergenic 55.0%
ACCGTCAGCGAGAACAGCAT+TGG - tig0004802:19862-19881 None:intergenic 55.0%
GTTTCCAACTTGGGCAGGGA+GGG - tig0004802:19889-19908 None:intergenic 55.0%
! CTCCCTGCCCAAGTTGGAAA+CGG + tig0004802:19888-19907 Msa1341230:CDS 55.0%
! TGCCGTTTCCAACTTGGGCA+GGG - tig0004802:19893-19912 None:intergenic 55.0%
GCAGTCTTCAGATCCGTCTG+TGG - tig0004802:19933-19952 None:intergenic 55.0%
GACTTCGGCAACGGAACATC+CGG - tig0004802:20032-20051 None:intergenic 55.0%
ATTGGAGGTTGAGCTGGGAC+TGG + tig0004802:20985-21004 Msa1341230:CDS 55.0%
! CCGTCTGTTCTGGATGCTTC+TGG + tig0004802:21047-21066 Msa1341230:CDS 55.0%
GTACCGTTCCGGCAACAAGA+AGG - tig0004802:21203-21222 None:intergenic 55.0%
GGAGGACCGCATTTGTAGTC+AGG - tig0004802:21359-21378 None:intergenic 55.0%
GTAGGACTAACACGAACCGG+AGG - tig0004802:21377-21396 None:intergenic 55.0%
AACGGCAACCCTGTTGGATC+TGG - tig0004802:21407-21426 None:intergenic 55.0%
GTACTACTGCACCTGCCATG+TGG + tig0004802:21591-21610 Msa1341230:CDS 55.0%
! GGAACAAGGACAGCATCGGA+GGG - tig0004802:21620-21639 None:intergenic 55.0%
! AGGAACAAGGACAGCATCGG+AGG - tig0004802:21621-21640 None:intergenic 55.0%
GAACTGCCAAGGCTTATGCG+TGG + tig0004802:21651-21670 Msa1341230:CDS 55.0%
CAGTTATCACCGCAAGGTGG+TGG - tig0004802:21707-21726 None:intergenic 55.0%
CCACCTTGCGGTGATAACTG+CGG + tig0004802:21707-21726 Msa1341230:CDS 55.0%
ACACCGCAGTTATCACCGCA+AGG - tig0004802:21713-21732 None:intergenic 55.0%
ACTGCGGTGTGAGCATCAAC+TGG + tig0004802:21723-21742 Msa1341230:CDS 55.0%
GCACCCTAGGATCTGTACGA+GGG - tig0004802:21985-22004 None:intergenic 55.0%
! GTACAGATCCTAGGGTGCCT+GGG + tig0004802:21987-22006 Msa1341230:CDS 55.0%
!! TGTTGTTTCCCAGGCACCCT+AGG - tig0004802:21998-22017 None:intergenic 55.0%
! GTGTTGTTCGTGGTGGTGAC+GGG + tig0004802:22059-22078 Msa1341230:CDS 55.0%
TTCCAACCAGTGGTGCTTCC+AGG + tig0004802:22134-22153 Msa1341230:CDS 55.0%
!! TTCCTGGAAGCACCACTGGT+TGG - tig0004802:22139-22158 None:intergenic 55.0%
AACCAGTGGTGCTTCCAGGA+AGG + tig0004802:22138-22157 Msa1341230:CDS 55.0%
!! TTCCTTCCTGGAAGCACCAC+TGG - tig0004802:22143-22162 None:intergenic 55.0%
! ATGTGGAGAAGTGGGGTGTC+CGG + tig0004802:23007-23026 Msa1341230:intron 55.0%
CAATGCGACGACGTTATGGC+CGG - tig0004802:24350-24369 None:intergenic 55.0%
! AACGTCGTCGCATTGATCGG+TGG + tig0004802:24355-24374 Msa1341230:CDS 55.0%
!! TTAGGGCGACTGAAGCGTTG+AGG + tig0004802:25145-25164 Msa1341230:CDS 55.0%
! GCCGGGATCTGAGACAAAGT+TGG + tig0004802:25167-25186 Msa1341230:CDS 55.0%
CTCATCTCATACTCCACCGC+CGG + tig0004802:25964-25983 Msa1341230:intron 55.0%
! GTTCGGTGGCAGTTGTACTC+CGG - tig0004802:25986-26005 None:intergenic 55.0%
!! GTTTCAGCACGACGGGCTTT+TGG + tig0004802:26104-26123 Msa1341230:intron 55.0%
AGGCGGCAGTTGAACTCCGA+CGG - tig0004802:19706-19725 None:intergenic 60.0%
ACTACCCTCCCTGCCCAAGT+TGG + tig0004802:19882-19901 Msa1341230:CDS 60.0%
CGTTTCCAACTTGGGCAGGG+AGG - tig0004802:19890-19909 None:intergenic 60.0%
!! GTGCCGTTTCCAACTTGGGC+AGG - tig0004802:19894-19913 None:intergenic 60.0%
! GGAAACGGCACCGTTTTCGC+TGG + tig0004802:19903-19922 Msa1341230:CDS 60.0%
!!! TGTTTTTGGTGTGGCGCCGC+CGG + tig0004802:20010-20029 Msa1341230:CDS 60.0%
TTCGGCAACGGAACATCCGG+CGG - tig0004802:20029-20048 None:intergenic 60.0%
! AGCATCGGAGGGAAGCCACA+TGG - tig0004802:21609-21628 None:intergenic 60.0%
TGCCAAGGCTTATGCGTGGG+CGG + tig0004802:21655-21674 Msa1341230:CDS 60.0%
!! CAAGGTGGTGGGTTTGGCGT+TGG - tig0004802:21695-21714 None:intergenic 60.0%
ACGCCAAACCCACCACCTTG+CGG + tig0004802:21695-21714 Msa1341230:CDS 60.0%
!! TCACCGCAAGGTGGTGGGTT+TGG - tig0004802:21701-21720 None:intergenic 60.0%
CCGCAGTTATCACCGCAAGG+TGG - tig0004802:21710-21729 None:intergenic 60.0%
GGCACCCTAGGATCTGTACG+AGG - tig0004802:21986-22005 None:intergenic 60.0%
! CGTACAGATCCTAGGGTGCC+TGG + tig0004802:21986-22005 Msa1341230:CDS 60.0%
GGTGTCCGGAGTACGAACTC+CGG + tig0004802:23021-23040 Msa1341230:intron 60.0%
! TGATGGGTCACCGATACGCG+CGG - tig0004802:24386-24405 None:intergenic 60.0%
! CGCGTATCGGTGACCCATCA+GGG + tig0004802:24386-24405 Msa1341230:CDS 60.0%
TTTGGGTCGGTGACGTTCGG+TGG - tig0004802:26000-26019 None:intergenic 60.0%
GCTGTCGGGTTTCAGCACGA+CGG + tig0004802:26096-26115 Msa1341230:intron 60.0%
CTGTCGGGTTTCAGCACGAC+GGG + tig0004802:26097-26116 Msa1341230:intron 60.0%
! GGGAACGGCACCATTTTCGC+TGG + tig0004802:26180-26199 Msa1341230:intron 60.0%
TCGGAGGGAAGCCACATGGC+AGG - tig0004802:21605-21624 None:intergenic 65.0%
GCCAAGGCTTATGCGTGGGC+GGG + tig0004802:21656-21675 Msa1341230:CDS 65.0%
CCAAGGCTTATGCGTGGGCG+GGG + tig0004802:21657-21676 Msa1341230:CDS 65.0%
TCGAGGACTGAGTCGCGGTG+TGG + tig0004802:22323-22342 Msa1341230:intron 65.0%
AGGGGCCGGAGTTCGTACTC+CGG - tig0004802:23029-23048 None:intergenic 65.0%
CTCTCATGGTTCCGCCGCTC+CGG + tig0004802:24328-24347 Msa1341230:CDS 65.0%
CGACGACGTTATGGCCGGAG+CGG - tig0004802:24345-24364 None:intergenic 65.0%
! GCGCGTATCGGTGACCCATC+AGG + tig0004802:24385-24404 Msa1341230:CDS 65.0%
!! GGCGACTGAAGCGTTGAGGC+CGG + tig0004802:25149-25168 Msa1341230:CDS 65.0%
!! GCGACTGAAGCGTTGAGGCC+GGG + tig0004802:25150-25169 Msa1341230:CDS 65.0%
TGGCAGTTGTACTCCGGCGG+TGG - tig0004802:25980-25999 None:intergenic 65.0%
CGGTGGCAGTTGTACTCCGG+CGG - tig0004802:25983-26002 None:intergenic 65.0%
GGACGGTACTACCCTCCCTG+AGG + tig0004802:26152-26171 Msa1341230:intron 65.0%
ACTACCCTCCCTGAGGCCGA+TGG + tig0004802:26159-26178 Msa1341230:intron 65.0%
CTACCCTCCCTGAGGCCGAT+GGG + tig0004802:26160-26179 Msa1341230:intron 65.0%
GTTCCCATCGGCCTCAGGGA+GGG - tig0004802:26166-26185 None:intergenic 65.0%
CTCCCTGAGGCCGATGGGAA+CGG + tig0004802:26165-26184 Msa1341230:intron 65.0%
TGCCGTTCCCATCGGCCTCA+GGG - tig0004802:26170-26189 None:intergenic 65.0%
CCCCGCCCACGCATAAGCCT+TGG - tig0004802:21660-21679 None:intergenic 70.0%
CGACGTTATGGCCGGAGCGG+CGG - tig0004802:24342-24361 None:intergenic 70.0%
!! GGTGGTGCCACCGCGCGTAT+CGG + tig0004802:24373-24392 Msa1341230:CDS 70.0%
TGGGTCACCGATACGCGCGG+TGG - tig0004802:24383-24402 None:intergenic 70.0%
CGTTCCCATCGGCCTCAGGG+AGG - tig0004802:26167-26186 None:intergenic 70.0%
! GTGCCGTTCCCATCGGCCTC+AGG - tig0004802:26171-26190 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0004802 gene 19523 26860 19523 ID=Msa1341230;Name=Msa1341230
tig0004802 mRNA 19523 26860 19523 ID=Msa1341230-mRNA-1;Parent=Msa1341230;Name=Msa1341230-mRNA-1;_AED=0.08;_eAED=0.09;_QI=59|0|0.2|1|0.25|0.4|5|0|1203
tig0004802 exon 19523 20101 19523 ID=Msa1341230-mRNA-1:exon:3047;Parent=Msa1341230-mRNA-1
tig0004802 exon 20859 22201 20859 ID=Msa1341230-mRNA-1:exon:3048;Parent=Msa1341230-mRNA-1
tig0004802 exon 23944 25446 23944 ID=Msa1341230-mRNA-1:exon:3049;Parent=Msa1341230-mRNA-1
tig0004802 exon 26212 26292 26212 ID=Msa1341230-mRNA-1:exon:3050;Parent=Msa1341230-mRNA-1
tig0004802 exon 26696 26860 26696 ID=Msa1341230-mRNA-1:exon:3051;Parent=Msa1341230-mRNA-1
tig0004802 five_prime_UTR 19523 19581 19523 ID=Msa1341230-mRNA-1:five_prime_utr;Parent=Msa1341230-mRNA-1
tig0004802 CDS 19582 20101 19582 ID=Msa1341230-mRNA-1:cds;Parent=Msa1341230-mRNA-1
tig0004802 CDS 20859 22201 20859 ID=Msa1341230-mRNA-1:cds;Parent=Msa1341230-mRNA-1
tig0004802 CDS 23944 25446 23944 ID=Msa1341230-mRNA-1:cds;Parent=Msa1341230-mRNA-1
tig0004802 CDS 26212 26292 26212 ID=Msa1341230-mRNA-1:cds;Parent=Msa1341230-mRNA-1
tig0004802 CDS 26696 26860 26696 ID=Msa1341230-mRNA-1:cds;Parent=Msa1341230-mRNA-1
Gene Sequence

>Msa1341230

ATGATTTCGCTACGAAACCTCTGTAGCTTCTTCACCATCCTCTTAGCAACAATCATACTAACAACGACGTCGTTTACCGATGCACAATCGTGCAACGGTATACTCGTCTCATACTCCTCTTCCGTCGGAGTTCAACTGCCGCCTAACGTCACCGACCCAAAGAAGCAACCCTACCGATTCGAATCAACCTTAAGCGTGCTCAACAACGGTCTCGATGAACTCAAGTCATGGAAAGTCGCCGTCGAGTTTCAGCACGACGAGTATCTTGTTTCTGCTTCCAATGCTGTTCTCGCTGACGGTACTACCCTCCCTGCCCAAGTTGGAAACGGCACCGTTTTCGCTGGTTTTCCACAGACGGATCTGAAGACTGCTGTTGAAACGGCTGGTGATTTGACTCAGATGCAGGCTCAGGTTAGTCTTGTTGGGACTGTTTTTGGTGTGGCGCCGCCGGATGTTCCGTTGCCGAAGTCGATCAAGCTTGCTAATGATGGATTCATCTGTCAAAAAACCACCGGTCAAGATGAAAAGTTTCTGCCGCGTCAAAATGGTGATCTTACGATCATGTATGATGTGATTAGATCCTATGATTCAAATTACTGGGCAGAGGTTACGATCGGTAACCAAAATCCTCTCGGAAGGCTTGATAATTGGAGGTTGAGCTGGGACTGGATGAATGACGAGTTCATATTTACAATGAAAGGAGCTTATCCGTCTGTTCTGGATGCTTCTGGTTGTATTTTTGGTAAGCAAGGTACATACTACAAAGAGCTTGATTTTGCTAATGTATTGAATTGTCAGAGGAGGCCTACCATTATTGATCTTCCTCCTACTAAATTCAATGATACTGATGTTGGGAAAATTCCTTCTTGTTGCCGGAACGGTACTATATTGCCAAAATCTATGGATCCTAGTAAGTCTATTTCGAGATTCCAAATGCAGGTGTACAAAATGCCGCCAGTGCTTAACCGATCTGAGCTTTCACCACCACAGAACTGGAAGATTAGTGGTTCACTTAACCCTGACTACAAATGCGGTCCTCCGGTTCGTGTTAGTCCTACTGAGAATCCAGATCCAACAGGGTTGCCGTTAAACAAAACTGTAATGGCAAGTTGGCAGGTTGTGTGTAACATTACAGCAGCCAAGGGAACATCAAGTAAATGCTGTGTCTCATTTTCAGCTTATTACAATGAATCAGTTATTCCTTGCAAAACGTGTGCATGTGGATGCCCCAAGACTACAGCAAGAACATGTAGTACTACTGCACCTGCCATGTGGCTTCCCTCCGATGCTGTCCTTGTTCCTTTTGAGAACCGAACTGCCAAGGCTTATGCGTGGGCGGGGATAAAACATCTACCAACGCCAAACCCACCACCTTGCGGTGATAACTGCGGTGTGAGCATCAACTGGCATTTACTGTCAGATTATAATAAAGGCTGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAGACTAATTTTGCAGACTGGTTTACTGCTGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCGTTCAATGCAAGCGCCATAGAAATAGGTGGTGTTAATAATACGATAATAATGCAAGGTTTGGAGGGATTGAACTACCTTGTTGGAGAAACAAATGGAGCTAACCCTCGTACAGATCCTAGGGTGCCTGGGAAACAACAGTCAGTAATCTCATTCACAAAGAAAACTACTCCTGGAATCAGTGTTGTTCGTGGTGGTGACGGGTTTCCCAAGAAAGTCTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCTGTACTTCCAACCAGTGGTGCTTCCAGGAAGGAATTTTCCTTTGCTACTTTGATGCTTCTACCACTGTTGCTATACTTTGAGTATTTTTGCTTCAGGAGTCACACGCCTCAAACCCCCAACATCATCATCAACACAACAATGGCCACAAATTTTGTTTCAAGGTCAATTTTCTTCTCTCATTCCGCCAAGCTTTTCACCTTTCCATTCAAACCCCCCTTTTCTTCTTCTTCTTCTTCTTCATGCCTCCCCTTTTCTCGAACAACCTGCACTCTCCAACACCAACAACCTCCGAATGTCATCGGAATCCTCGAACAAAGAGGGTTACTGGACTCAATAACAAACGAATCTCTCAGAAGCATTTCATCAAACACCATCAACGCACCCTTAAAAGTCTACTGTGGATTCGACCCAACTGCCCAGAGCTTGCATTTGGGCAATTTATTGGCTCTCATTGTTCTCTCATGGTTCCGCCGCTCCGGCCATAACGTCGTCGCATTGATCGGTGGTGCCACCGCGCGTATCGGTGACCCATCAGGGAAAAGCCTTGAAAGACCTCAACTTGACGTTGAGACTTTGGAGAGGAACACTGTTGGGATTGAAAAAACCATCAGAACAATCTTGGGTCGTGCTCAAAATCATCCAAACTTTGGTAATGTTAATGATTCTGTTGTTGTTTTGAACAATTATGATTGGTGGAAAGAGTTTAGTTTATTGGATTTTCTGAAAAGGGTTGGTAAATATGCTAGAGTAGGTTCAATGATGGCTAAAGAGAGTGTTAGGAAGAGATTAGAATCTGAACAAGGAATGAGTTATACGGAGTTTACATATCAGTTATTGCAGGGTTATGATTTTTTGTATTTGTTTCAGAATGAGGGTGTTAATGTTCAAATTGGGGGTAGTGATCAATGGGGTAATATAACTGCTGGAACTGAGTTGATTAGGAAGATATTGCAGGTAGAAGGTGGTACCTATGGTTTGACATTTCCTCTTTTGTTGAAAAGCGATGGTACAAAATTCGGTAAATCGGAGGATGGTGCAATTTGGTTGTCTCCGTCCATGTTATCTCCATACAAGTTTTATCAGTATTTTTTCTCGGTTCCGGATGCTGATGTTGTTAGGTTTTTGAAAATTCTTACTTTTTTGGATATTGATGAGATAGTTAAGTTGGAAGAAGAGATGAAGAAGCCTGGATATGTGCCTAACAATGCTCAGTGTAGGCTTGCTGAAGAAGTTACTCGATTTGTTCACGGAGAAGATGGTTTGAGCGAAGCTCTTAGGGCGACTGAAGCGTTGAGGCCGGGATCTGAGACAAAGTTGGACTGGAAAACAATTGAGGGGATTGCTGAGGATGTCCCGTCTTGTTCTTTAGCTTATAATGAAGTTTTGAATCAGTCATTGGTTGATCTTTCTGTTTCTTCTGGTTTGTTCGACAGCAAATCTGCTTCACGTCGGTTGTTAAAGCAAGGAGGTGTTTACTTGAATAATAGCAGAGTAGATAGTGAAAATAAGAGGATTGAGGCAGCTGATATAGTGGATGGTAAAGTTCTCCTTTTATCTGCGGGAAAAAAGAATAAGACGGATCTGATGACTACTGTTGAAACGGCTGGTGATTTGAAGCAGATGCAGGCTCAGATAAGCCTTGTTGGGACTGTTTTTGTAAGAATGGGACTAATGTGTGTTGCACAAGAGATCCCAAGTCCAAATCAAACATCACTACCGATGAAAAGAAAACTACTCCTGGAATCGGTATCGTTTGTGGTGACGGGTTTCCCAAATAAATCTTCTTCAATGAGGAGGAATGTTCTCTTCCTTCTCATGTAA
Protein sequence

>Msa1341230

MISLRNLCSFFTILLATIILTTTSFTDAQSCNGILVSYSSSVGVQLPPNVTDPKKQPYRFESTLSVLNNGLDELKSWKVAVEFQHDEYLVSASNAVLADGTTLPAQVGNGTVFAGFPQTDLKTAVETAGDLTQMQAQVSLVGTVFGVAPPDVPLPKSIKLANDGFICQKTTGQDEKFLPRQNGDLTIMYDVIRSYDSNYWAEVTIGNQNPLGRLDNWRLSWDWMNDEFIFTMKGAYPSVLDASGCIFGKQGTYYKELDFANVLNCQRRPTIIDLPPTKFNDTDVGKIPSCCRNGTILPKSMDPSKSISRFQMQVYKMPPVLNRSELSPPQNWKISGSLNPDYKCGPPVRVSPTENPDPTGLPLNKTVMASWQVVCNITAAKGTSSKCCVSFSAYYNESVIPCKTCACGCPKTTARTCSTTAPAMWLPSDAVLVPFENRTAKAYAWAGIKHLPTPNPPPCGDNCGVSINWHLLSDYNKGWSARVTLFNWGETNFADWFTAVQMDKAAAGFEKMYSFNASAIEIGGVNNTIIMQGLEGLNYLVGETNGANPRTDPRVPGKQQSVISFTKKTTPGISVVRGGDGFPKKVFFNGEECSLPSVLPTSGASRKEFSFATLMLLPLLLYFEYFCFRSHTPQTPNIIINTTMATNFVSRSIFFSHSAKLFTFPFKPPFSSSSSSSCLPFSRTTCTLQHQQPPNVIGILEQRGLLDSITNESLRSISSNTINAPLKVYCGFDPTAQSLHLGNLLALIVLSWFRRSGHNVVALIGGATARIGDPSGKSLERPQLDVETLERNTVGIEKTIRTILGRAQNHPNFGNVNDSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESEQGMSYTEFTYQLLQGYDFLYLFQNEGVNVQIGGSDQWGNITAGTELIRKILQVEGGTYGLTFPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLKILTFLDIDEIVKLEEEMKKPGYVPNNAQCRLAEEVTRFVHGEDGLSEALRATEALRPGSETKLDWKTIEGIAEDVPSCSLAYNEVLNQSLVDLSVSSGLFDSKSASRRLLKQGGVYLNNSRVDSENKRIEAADIVDGKVLLLSAGKKNKTDLMTTVETAGDLKQMQAQISLVGTVFVRMGLMCVAQEIPSPNQTSLPMKRKLLLESVSFVVTGFPNKSSSMRRNVLFLLM*