Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345800 | XP_003597149.2 | 96.577 | 672 | 15 | 3 | 1 | 670 | 1 | 666 | 0.0 | 1343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345800 | sp|Q8RWZ7|VHAA1_ARATH | 77.910 | 670 | 145 | 1 | 1 | 670 | 1 | 667 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345800 | G7IU50 | 96.577 | 672 | 15 | 3 | 1 | 670 | 1 | 666 | 0.0 | 1343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0263220 | Msa1345800 | 0.886799 | 2.497767e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345800 | MtrunA17_Chr2g0325991 | 96.577 | 672 | 15 | 3 | 1 | 670 | 1 | 666 | 0.0 | 1343 |
| Msa1345800 | MtrunA17_Chr4g0030121 | 82.344 | 674 | 109 | 4 | 1 | 670 | 1 | 668 | 0.0 | 1151 |
| Msa1345800 | MtrunA17_Chr4g0035561 | 60.030 | 663 | 254 | 5 | 9 | 668 | 12 | 666 | 0.0 | 804 |
| Msa1345800 | MtrunA17_Chr3g0142161 | 57.576 | 660 | 262 | 3 | 11 | 670 | 1 | 642 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345800 | AT2G28520.1 | 77.910 | 670 | 145 | 1 | 1 | 670 | 1 | 667 | 0.0 | 1085 |
| Msa1345800 | AT4G39080.1 | 61.212 | 660 | 247 | 4 | 11 | 668 | 14 | 666 | 0.0 | 819 |
| Msa1345800 | AT2G21410.1 | 59.697 | 660 | 257 | 3 | 11 | 668 | 15 | 667 | 0.0 | 814 |
Find 175 sgRNAs with CRISPR-Local
Find 649 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCGTGCCGTTTCCTATTT+AGG | 0.120157 | tig0007630:-9305 | Msa1345800:CDS |
| TGAAGCTTCTTTAGTATAAA+AGG | 0.189814 | tig0007630:+84 | None:intergenic |
| CTCGACGTTTCCCGGGAAAA+TGG | 0.193658 | tig0007630:-9417 | Msa1345800:exon |
| TCCTATTTGCTATGATGTTT+GGG | 0.194418 | tig0007630:-2745 | Msa1345800:CDS |
| CCCGGGAAACGTCGAGAAAA+TGG | 0.211402 | tig0007630:+9424 | None:intergenic |
| TTCCTATTTGCTATGATGTT+TGG | 0.212932 | tig0007630:-2746 | Msa1345800:CDS |
| TCATGGAATTTGCCTGTTGC+TGG | 0.216783 | tig0007630:-2714 | Msa1345800:CDS |
| TGCTATGATGTTTGGGGACT+GGG | 0.219415 | tig0007630:-2738 | Msa1345800:CDS |
| AGTCATGGCCGTGCTGTTTC+AGG | 0.224391 | tig0007630:-5610 | Msa1345800:CDS |
| TATTTCAATGCTCGTTTCTT+TGG | 0.246161 | tig0007630:-547 | Msa1345800:CDS |
| CCAGAGAACATTTGTTAATC+AGG | 0.254589 | tig0007630:-7764 | Msa1345800:intron |
| AAACTGCAGGATTTGCTTCT+TGG | 0.274500 | tig0007630:+2789 | None:intergenic |
| GCAGATTGTGTTATTGCTTT+TGG | 0.282862 | tig0007630:-142 | Msa1345800:intron |
| CTCATACTTGAAGTGGTCTT+TGG | 0.287606 | tig0007630:+249 | None:intergenic |
| CATTGACTTGGAGGATTTAG+AGG | 0.291113 | tig0007630:-6301 | Msa1345800:intron |
| TTGGAAGCTCACTGGATATA+AGG | 0.301104 | tig0007630:-528 | Msa1345800:intron |
| CTTAAACCAGATGTATTTGA+TGG | 0.313005 | tig0007630:+5379 | None:intergenic |
| ATCTTCCTTAACAGTCTGTT+TGG | 0.313649 | tig0007630:-395 | Msa1345800:CDS |
| GCAATCATATAATGAACTTC+TGG | 0.316325 | tig0007630:-6004 | Msa1345800:CDS |
| TTGGTGAGAATCAGTTGTTC+TGG | 0.316925 | tig0007630:-274 | Msa1345800:CDS |
| ACCAGATGTATTTGATGGTT+GGG | 0.322783 | tig0007630:+5384 | None:intergenic |
| CCGTGCTTACTTATGTCTTC+AGG | 0.323958 | tig0007630:+4957 | None:intergenic |
| TTGCAGACCATCTAACAAAA+TGG | 0.329369 | tig0007630:-4421 | Msa1345800:CDS |
| ATCAGGGATGCACATACTAT+TGG | 0.331832 | tig0007630:-718 | Msa1345800:intron |
| TTGCTATGATGTTTGGGGAC+TGG | 0.334388 | tig0007630:-2739 | Msa1345800:CDS |
| TTGCCGAAGTTTGTCACTAT+TGG | 0.334677 | tig0007630:+6023 | None:intergenic |
| GACAGCATCTTTACTTGAAC+AGG | 0.340198 | tig0007630:-5539 | Msa1345800:intron |
| CCCTTCTCATTATTGTTAAG+TGG | 0.341778 | tig0007630:-364 | Msa1345800:CDS |
| CCAGAAGCTGGGAAGCTTCA+TGG | 0.342044 | tig0007630:-2264 | Msa1345800:intron |
| TCTTCAACACATGATGCTTA+TGG | 0.344847 | tig0007630:+9635 | None:intergenic |
| TTCTTTAGTATAAAAGGCTT+TGG | 0.347406 | tig0007630:+90 | None:intergenic |
| TTTGTAAATCCAAGGCTCTT+AGG | 0.353537 | tig0007630:-5339 | Msa1345800:CDS |
| AAGACCGAGTTCACCTAAAT+AGG | 0.358093 | tig0007630:+9292 | None:intergenic |
| CACTTTCACAAATCCGTATC+AGG | 0.360940 | tig0007630:-3935 | Msa1345800:CDS |
| CTGAAAATTTGTGAGGCATT+TGG | 0.363681 | tig0007630:-4999 | Msa1345800:CDS |
| AGATCATCTGTGGCACAAAT+TGG | 0.368502 | tig0007630:+414 | None:intergenic |
| AAAACCATCTCGGTTGTAAC+AGG | 0.382225 | tig0007630:+5238 | None:intergenic |
| AACGGCACGATGAGCGGATT+CGG | 0.384147 | tig0007630:+9316 | None:intergenic |
| GATGCAGGAGGCACTGCAAC+GGG | 0.388884 | tig0007630:-4043 | Msa1345800:CDS |
| TGGAAGAAAGCGCCTTGTTC+CGG | 0.389383 | tig0007630:+4444 | None:intergenic |
| CAGGAAATTGTTGATGCATA+TGG | 0.391614 | tig0007630:-3916 | Msa1345800:CDS |
| ATTCCACTGCATCCATTTGA+TGG | 0.392806 | tig0007630:+3983 | None:intergenic |
| CAGCTAGGATCCACACCAAA+TGG | 0.395521 | tig0007630:+670 | None:intergenic |
| GAATTAATGCTCCCAGCAAC+AGG | 0.399595 | tig0007630:+2702 | None:intergenic |
| CCCCAAACATCATAGCAAAT+AGG | 0.406183 | tig0007630:+2744 | None:intergenic |
| AGCTTCATGGAGATGCTGTT+TGG | 0.406955 | tig0007630:-2251 | Msa1345800:CDS |
| TTACTTATGTCTTCAGGAAC+AGG | 0.408346 | tig0007630:+4963 | None:intergenic |
| TTCTCGTACCCTACTGCAAC+CGG | 0.413877 | tig0007630:-6325 | Msa1345800:CDS |
| CCTGATTAACAAATGTTCTC+TGG | 0.417140 | tig0007630:+7764 | None:intergenic |
| GAATGGGAAATAATAATATT+CGG | 0.427797 | tig0007630:+9518 | None:intergenic |
| TGGCATAATCTTCCATCAAA+TGG | 0.429724 | tig0007630:-3995 | Msa1345800:CDS |
| CTGAATGTATTCAAATGGAA+TGG | 0.437056 | tig0007630:+9501 | None:intergenic |
| GTCTGAATCACTGTGTAGAC+AGG | 0.437945 | tig0007630:+5099 | None:intergenic |
| CCTTTCAAACCTAAGAGCCT+TGG | 0.440502 | tig0007630:+5330 | None:intergenic |
| ATTATTGTTAAGTGGTGTAC+TGG | 0.441717 | tig0007630:-356 | Msa1345800:CDS |
| TGGTGAGAATCAGTTGTTCT+GGG | 0.442657 | tig0007630:-273 | Msa1345800:CDS |
| TATATATCATCACATGATAA+AGG | 0.444464 | tig0007630:+321 | None:intergenic |
| AGACTCTGAATGTATTCAAA+TGG | 0.445356 | tig0007630:+9496 | None:intergenic |
| CAACTTTGGATGCTGGGATC+AGG | 0.448224 | tig0007630:-4469 | Msa1345800:CDS |
| ATTCAAGATTGTATTACAAA+AGG | 0.449790 | tig0007630:-5980 | Msa1345800:intron |
| GCGTGGAAGTCGTTCAGAAT+TGG | 0.450638 | tig0007630:-647 | Msa1345800:CDS |
| GTAAGCACGGGCAAATAACT+AGG | 0.451025 | tig0007630:-4944 | Msa1345800:CDS |
| TGGCTATTATTGCAGTTCCA+TGG | 0.457738 | tig0007630:-122 | Msa1345800:CDS |
| ATGTTTGGGGACTGGGGTCA+TGG | 0.460087 | tig0007630:-2731 | Msa1345800:CDS |
| GCACGATGAGCGGATTCGGC+AGG | 0.461815 | tig0007630:+9320 | None:intergenic |
| TTTGATAGCAATTCTCAAGT+TGG | 0.462373 | tig0007630:-4015 | Msa1345800:CDS |
| TACCGTGATCCATACCCATT+TGG | 0.462921 | tig0007630:-685 | Msa1345800:CDS |
| AACCAGATGTATTTGATGGT+TGG | 0.463490 | tig0007630:+5383 | None:intergenic |
| CATGGAATTTGCCTGTTGCT+GGG | 0.464383 | tig0007630:-2713 | Msa1345800:CDS |
| GATATCCAAACAGACTGTTA+AGG | 0.465549 | tig0007630:+390 | None:intergenic |
| TTTGGTTTCTTCCAGAAGCT+GGG | 0.471800 | tig0007630:-2275 | Msa1345800:intron |
| TACCGACCTAGAGGCAACTT+TGG | 0.480505 | tig0007630:-4483 | Msa1345800:CDS |
| GGCTTTGGAAAGAGCATCCA+TGG | 0.483435 | tig0007630:+105 | None:intergenic |
| CATTTGGTGTGGATCCTAGC+TGG | 0.485533 | tig0007630:-669 | Msa1345800:CDS |
| CCAAGGCTCTTAGGTTTGAA+AGG | 0.488630 | tig0007630:-5330 | Msa1345800:CDS |
| TGAATGTATTCAAATGGAAT+GGG | 0.488733 | tig0007630:+9502 | None:intergenic |
| CCCCAACCATCAAATACATC+TGG | 0.490317 | tig0007630:-5385 | Msa1345800:CDS |
| CTAGAGGCAACTTTGGATGC+TGG | 0.492388 | tig0007630:-4476 | Msa1345800:CDS |
| TTAAGCCCTACAGACGAACT+TGG | 0.496267 | tig0007630:-293 | Msa1345800:CDS |
| TTGAACGAAGGTCATCTTCT+CGG | 0.498132 | tig0007630:+9352 | None:intergenic |
| GCATCAACAATTTCCTGATA+CGG | 0.498405 | tig0007630:+3922 | None:intergenic |
| TCTCACCAAGTTCGTCTGTA+GGG | 0.500069 | tig0007630:+288 | None:intergenic |
| TCCATGATTTGCTCTCCAGC+TGG | 0.501971 | tig0007630:+5262 | None:intergenic |
| ATGAAGATGTCCATTCTGTT+TGG | 0.504716 | tig0007630:-604 | Msa1345800:CDS |
| TAGAGGCAACTTTGGATGCT+GGG | 0.508464 | tig0007630:-4475 | Msa1345800:CDS |
| AGAAAAGTCTATATCGAGAA+AGG | 0.510908 | tig0007630:+9546 | None:intergenic |
| GCAACCGGACATTGACTTGG+AGG | 0.513712 | tig0007630:-6310 | Msa1345800:CDS |
| CCTATTTGCTATGATGTTTG+GGG | 0.516058 | tig0007630:-2744 | Msa1345800:CDS |
| GATGGACCAAATATGTGAAA+AGG | 0.517624 | tig0007630:+2152 | None:intergenic |
| TCGTTTCTTTGGAAGCTCAC+TGG | 0.518522 | tig0007630:-536 | Msa1345800:CDS |
| GGATCCACACCAAATGGGTA+TGG | 0.518824 | tig0007630:+676 | None:intergenic |
| TGGTGTGGCACATATGAACT+TGG | 0.522038 | tig0007630:-584 | Msa1345800:CDS |
| TGGTCTTAAAATATGTAGGT+GGG | 0.524738 | tig0007630:+3959 | None:intergenic |
| AAATCCTCCAAGTCAATGTC+CGG | 0.531187 | tig0007630:+6306 | None:intergenic |
| CCAGATGTATTTGATGGTTG+GGG | 0.532532 | tig0007630:+5385 | None:intergenic |
| CTGGTTTAAGATTCATCAGT+GGG | 0.533696 | tig0007630:-5366 | Msa1345800:CDS |
| TTCATGGAGATGCTGTTTGG+TGG | 0.534325 | tig0007630:-2248 | Msa1345800:CDS |
| ACTGCAACCGGACATTGACT+TGG | 0.535248 | tig0007630:-6313 | Msa1345800:CDS |
| AACCAGACTCATACTTGAAG+TGG | 0.539032 | tig0007630:+242 | None:intergenic |
| TTCAGGCGAGATAGAACTAC+AGG | 0.539313 | tig0007630:-5593 | Msa1345800:CDS |
| GTTTCCTATTTAGGTGAACT+CGG | 0.540506 | tig0007630:-9296 | Msa1345800:CDS |
| CTTCCATCAAATGGATGCAG+TGG | 0.540871 | tig0007630:-3986 | Msa1345800:CDS |
| TGGATGCTGGGATCAGGCAC+CGG | 0.541463 | tig0007630:-4463 | Msa1345800:CDS |
| GTGGGTAAATTTCAGGCGTG+TGG | 0.541524 | tig0007630:-5646 | Msa1345800:intron |
| TTAACAAATGTTCTCTGGAA+AGG | 0.542253 | tig0007630:+7769 | None:intergenic |
| TTGGTCTTAAAATATGTAGG+TGG | 0.542745 | tig0007630:+3958 | None:intergenic |
| AGCTAGGATCCACACCAAAT+GGG | 0.544082 | tig0007630:+671 | None:intergenic |
| TGGGATCAGGCACCGGAACA+AGG | 0.551148 | tig0007630:-4456 | Msa1345800:CDS |
| AGATGCAGGAGGCACTGCAA+CGG | 0.551994 | tig0007630:-4044 | Msa1345800:CDS |
| CCACTTAACAATAATGAGAA+GGG | 0.552347 | tig0007630:+364 | None:intergenic |
| AGTCAATGTCCGGTTGCAGT+AGG | 0.552592 | tig0007630:+6316 | None:intergenic |
| ACCACTTAACAATAATGAGA+AGG | 0.553277 | tig0007630:+363 | None:intergenic |
| ATGTGCCACACCAAACAGAA+TGG | 0.553900 | tig0007630:+594 | None:intergenic |
| ACCAGCTGGAGAGCAAATCA+TGG | 0.554803 | tig0007630:-5263 | Msa1345800:CDS |
| GCTATGATGTTTGGGGACTG+GGG | 0.555600 | tig0007630:-2737 | Msa1345800:CDS |
| TTCTCACCAAGTTCGTCTGT+AGG | 0.557602 | tig0007630:+287 | None:intergenic |
| TGGGATAATTTGTAAATCCA+AGG | 0.558545 | tig0007630:-5347 | Msa1345800:CDS |
| AGGAAATTGTTGATGCATAT+GGG | 0.559138 | tig0007630:-3915 | Msa1345800:intron |
| ATAGGAAACGGCACGATGAG+CGG | 0.561765 | tig0007630:+9310 | None:intergenic |
| CAGCATCCAAAGTTGCCTCT+AGG | 0.562003 | tig0007630:+4477 | None:intergenic |
| AAACATCATAGCAAATAGGA+AGG | 0.566536 | tig0007630:+2748 | None:intergenic |
| GGTCTTAAAATATGTAGGTG+GGG | 0.567854 | tig0007630:+3960 | None:intergenic |
| CACCAAATGGGTATGGATCA+CGG | 0.569939 | tig0007630:+683 | None:intergenic |
| GAGTTCACCTAAATAGGAAA+CGG | 0.572399 | tig0007630:+9298 | None:intergenic |
| ACATCATAGCAAATAGGAAG+GGG | 0.574170 | tig0007630:+2750 | None:intergenic |
| GTCAATGTCCGGTTGCAGTA+GGG | 0.575186 | tig0007630:+6317 | None:intergenic |
| AAGGATCAAGTCAATAAAGC+GGG | 0.575238 | tig0007630:-6360 | Msa1345800:CDS |
| CATCGACAACTTACCGCCGA+TGG | 0.576067 | tig0007630:-9387 | Msa1345800:CDS |
| ACAACAGTCGTGTAAACTGC+AGG | 0.577013 | tig0007630:+2776 | None:intergenic |
| ATGTTATTTCGTGCTACAAG+AGG | 0.577193 | tig0007630:-5307 | Msa1345800:CDS |
| TCATGGAGATGCTGTTTGGT+GGG | 0.584830 | tig0007630:-2247 | Msa1345800:CDS |
| TTGCAGTAGGGTACGAGAAG+AGG | 0.589252 | tig0007630:+6329 | None:intergenic |
| GAACGACTTCCACGCCAGCT+AGG | 0.589554 | tig0007630:+655 | None:intergenic |
| CACGATGAGCGGATTCGGCA+GGG | 0.591404 | tig0007630:+9321 | None:intergenic |
| CTGAAGACATAAGTAAGCAC+GGG | 0.600060 | tig0007630:-4956 | Msa1345800:CDS |
| AAAGATTCTGAAAATTTGTG+AGG | 0.600422 | tig0007630:-5006 | Msa1345800:CDS |
| GGATCCTGTTACAACCGAGA+TGG | 0.602924 | tig0007630:-5242 | Msa1345800:intron |
| GTCCTAGGTAAGAAGAGAGA+AGG | 0.607614 | tig0007630:-4244 | Msa1345800:intron |
| CCTGAAGACATAAGTAAGCA+CGG | 0.607695 | tig0007630:-4957 | Msa1345800:CDS |
| GTGTTGGTCTTAAAATATGT+AGG | 0.610059 | tig0007630:+3955 | None:intergenic |
| ATGGATCACGGTATTTGACT+AGG | 0.612437 | tig0007630:+695 | None:intergenic |
| TCGGATCGCATCAGATCCAT+CGG | 0.614320 | tig0007630:+9371 | None:intergenic |
| GATGTCCATTCTGTTTGGTG+TGG | 0.618192 | tig0007630:-599 | Msa1345800:CDS |
| GTGTAGACAGGGTACAGCAT+GGG | 0.618554 | tig0007630:+5111 | None:intergenic |
| CAAGGATCAAGTCAATAAAG+CGG | 0.619147 | tig0007630:-6361 | Msa1345800:CDS |
| TGAAAACAAGCTCGGTACAC+AGG | 0.624009 | tig0007630:-2669 | Msa1345800:intron |
| ATCCAAAGTTGCCTCTAGGT+CGG | 0.626375 | tig0007630:+4481 | None:intergenic |
| ACTCCAATAGTGACAAACTT+CGG | 0.626471 | tig0007630:-6026 | Msa1345800:CDS |
| TAAGCACGGGCAAATAACTA+GGG | 0.627980 | tig0007630:-4943 | Msa1345800:CDS |
| AAGAAAGAAGAAAACCATCT+CGG | 0.629524 | tig0007630:+5228 | None:intergenic |
| ATAGCACATGAAAACAAGCT+CGG | 0.634447 | tig0007630:-2677 | Msa1345800:CDS |
| AACATCATAGCAAATAGGAA+GGG | 0.636068 | tig0007630:+2749 | None:intergenic |
| AATGTCTCGTTGGAGAGGGA+TGG | 0.636121 | tig0007630:-4176 | Msa1345800:CDS |
| GATGTCGTGATACTTCATGC+AGG | 0.636195 | tig0007630:-2121 | Msa1345800:intron |
| ATACGGATTTGTGAAAGTGT+TGG | 0.638722 | tig0007630:+3939 | None:intergenic |
| TGTGTAGACAGGGTACAGCA+TGG | 0.640947 | tig0007630:+5110 | None:intergenic |
| TCACGACATCGAAATGCCGA+TGG | 0.642629 | tig0007630:+2134 | None:intergenic |
| AGACCATCTAACAAAATGGA+TGG | 0.645563 | tig0007630:-4417 | Msa1345800:CDS |
| TCTAACAAAATGGATGGACC+TGG | 0.646559 | tig0007630:-4411 | Msa1345800:intron |
| GGTGAGAATCAGTTGTTCTG+GGG | 0.647031 | tig0007630:-272 | Msa1345800:CDS |
| GGTGTGGCACATATGAACTT+GGG | 0.648142 | tig0007630:-583 | Msa1345800:CDS |
| TGATCCATACCCATTTGGTG+TGG | 0.654892 | tig0007630:-680 | Msa1345800:CDS |
| ACACATGATGCTTATGGTGA+CGG | 0.659273 | tig0007630:+9641 | None:intergenic |
| TGGGCAGGTAAAGCGATGTG+CGG | 0.665285 | tig0007630:-6409 | Msa1345800:intron |
| TCTGGTTTAAGATTCATCAG+TGG | 0.666384 | tig0007630:-5367 | Msa1345800:CDS |
| GTCACGTCTTACCGACCTAG+AGG | 0.669518 | tig0007630:-4492 | Msa1345800:CDS |
| CTGTTAAGGAAGATCATCTG+TGG | 0.677447 | tig0007630:+404 | None:intergenic |
| GCACGGGCAAATAACTAGGG+AGG | 0.680661 | tig0007630:-4940 | Msa1345800:intron |
| ACTAAAGAAGCTTCATACTG+AGG | 0.681287 | tig0007630:-76 | None:intergenic |
| AGGGATGATGAGTTGAACGA+AGG | 0.696018 | tig0007630:+9340 | None:intergenic |
| GGTGTGGATCCTAGCTGGCG+TGG | 0.704142 | tig0007630:-664 | Msa1345800:CDS |
| TCTGAATCACTGTGTAGACA+GGG | 0.704246 | tig0007630:+5100 | None:intergenic |
| CTATCTCGCCTGAAACAGCA+CGG | 0.731490 | tig0007630:+5602 | None:intergenic |
| TGATGCTTATGGTGACGGTG+CGG | 0.746406 | tig0007630:+9646 | None:intergenic |
| GATCGCATCAGATCCATCGG+CGG | 0.761413 | tig0007630:+9374 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATACAATATATTCAAA+AGG | + | tig0007630:1140-1159 | None:intergenic | 10.0% |
| !! | AATTGTATTATTATAACATA+GGG | - | tig0007630:4877-4896 | Msa1345800:intron | 10.0% |
| !!! | ATATTTTATTAAATATCATG+TGG | + | tig0007630:6800-6819 | None:intergenic | 10.0% |
| !! | TACTTAAAGTTAAAAATAAA+AGG | + | tig0007630:7236-7255 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTAACTTTAAGT+AGG | - | tig0007630:7235-7254 | Msa1345800:intron | 10.0% |
| !!! | TTTATTTTTAACTTTAAGTA+GGG | - | tig0007630:7236-7255 | Msa1345800:intron | 10.0% |
| !!! | ATATGTTAATTTTCTGATTA+TGG | - | tig0007630:1620-1639 | Msa1345800:intron | 15.0% |
| !!! | TATGTTAATTTTCTGATTAT+GGG | - | tig0007630:1621-1640 | Msa1345800:intron | 15.0% |
| !! | AGTAAAAAAATATTCATGTT+TGG | - | tig0007630:2906-2925 | Msa1345800:intron | 15.0% |
| !! | TATTCCTTAAATAAAATAAC+AGG | + | tig0007630:4041-4060 | None:intergenic | 15.0% |
| !!! | AATTTATTTTATCCATTAAG+TGG | - | tig0007630:4308-4327 | Msa1345800:intron | 15.0% |
| !!! | TACTAAATTGTTTATTTTAC+AGG | - | tig0007630:4335-4354 | Msa1345800:intron | 15.0% |
| !! | TTATAATAATACAATTGAAG+AGG | + | tig0007630:4873-4892 | None:intergenic | 15.0% |
| !! | CAATTGTATTATTATAACAT+AGG | - | tig0007630:4876-4895 | Msa1345800:intron | 15.0% |
| !! | ATTGTATTATTATAACATAG+GGG | - | tig0007630:4878-4897 | Msa1345800:intron | 15.0% |
| !!! | TTTGATGATTATTTCATATT+TGG | - | tig0007630:5225-5244 | Msa1345800:intron | 15.0% |
| !!! | TTGATGATTATTTCATATTT+GGG | - | tig0007630:5226-5245 | Msa1345800:intron | 15.0% |
| !! | AAAAAAAAATATTCATGTTG+CGG | + | tig0007630:5893-5912 | None:intergenic | 15.0% |
| !! | TTTATCTATTCAAAAACATA+AGG | + | tig0007630:6151-6170 | None:intergenic | 15.0% |
| !!! | AAATATTTTTGAATGAATGA+TGG | - | tig0007630:6211-6230 | Msa1345800:intron | 15.0% |
| !!! | CAATAAAATAGTTTTTCTTA+AGG | + | tig0007630:6399-6418 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTCCTATAATTC+AGG | + | tig0007630:8018-8037 | None:intergenic | 15.0% |
| !! | TAGTTAAAAAAAATGCAAAA+GGG | + | tig0007630:8252-8271 | None:intergenic | 15.0% |
| !!! | CTTTTTAAAAAAGAAAATTG+TGG | + | tig0007630:8319-8338 | None:intergenic | 15.0% |
| !!! | CACAATTTTCTTTTTTAAAA+AGG | - | tig0007630:8317-8336 | Msa1345800:intron | 15.0% |
| !!! | AAGTTAATTTATTTGCTAAA+AGG | - | tig0007630:8434-8453 | Msa1345800:intron | 15.0% |
| !! | GAATGGGAAATAATAATATT+CGG | + | tig0007630:236-255 | None:intergenic | 20.0% |
| !!! | AATTTTGTTGAATCTTGTTA+TGG | - | tig0007630:960-979 | Msa1345800:intron | 20.0% |
| !!! | GAATTTTAGAATGTTATAAG+AGG | - | tig0007630:1455-1474 | Msa1345800:intron | 20.0% |
| !! | TCCAATCTATAAAATTTAGA+AGG | + | tig0007630:1872-1891 | None:intergenic | 20.0% |
| !!! | ATTTTGGGAAGAAATAAATA+GGG | - | tig0007630:2081-2100 | Msa1345800:intron | 20.0% |
| !!! | AATATTTTATCTCTTTTGTC+TGG | - | tig0007630:2123-2142 | Msa1345800:CDS | 20.0% |
| !! | ATCATCGTAATTGATTAATA+CGG | + | tig0007630:2271-2290 | None:intergenic | 20.0% |
| !! | TATTATCGACACAAATATTA+TGG | + | tig0007630:2308-2327 | None:intergenic | 20.0% |
| !!! | AAAAATATGTGTTGTTTGTT+TGG | + | tig0007630:2500-2519 | None:intergenic | 20.0% |
| !! | TTGTGTAAAGAAACTTAAAA+AGG | - | tig0007630:2768-2787 | Msa1345800:CDS | 20.0% |
| !!! | TTTGAAATCAAATTTTGAGT+AGG | + | tig0007630:2826-2845 | None:intergenic | 20.0% |
| !! | ACAGATGATATCATTAAAAA+TGG | + | tig0007630:2967-2986 | None:intergenic | 20.0% |
| !! | TAAAATGCAAATTAACTGAA+GGG | + | tig0007630:2996-3015 | None:intergenic | 20.0% |
| !! | ATAAAATGCAAATTAACTGA+AGG | + | tig0007630:2997-3016 | None:intergenic | 20.0% |
| !! | ATTCAAGATTGTATTACAAA+AGG | - | tig0007630:3771-3790 | Msa1345800:intron | 20.0% |
| !! | TAAGTTCGTTAAACAATTAA+TGG | - | tig0007630:3867-3886 | Msa1345800:intron | 20.0% |
| !!! | CAATCCTGTTATTTTATTTA+AGG | - | tig0007630:4034-4053 | Msa1345800:CDS | 20.0% |
| !! | AAGAAAAATATATCAAGGAT+GGG | + | tig0007630:4251-4270 | None:intergenic | 20.0% |
| !! | ATTTAGTATATTCCACTTAA+TGG | + | tig0007630:4323-4342 | None:intergenic | 20.0% |
| !!! | CTTTATGAAGATTGATAATT+TGG | - | tig0007630:4550-4569 | Msa1345800:intron | 20.0% |
| !!! | TGAGTGAAAGTTTTTTTTTT+TGG | - | tig0007630:4945-4964 | Msa1345800:CDS | 20.0% |
| !! | TCAAAATTTAACATAAACCA+TGG | + | tig0007630:5210-5229 | None:intergenic | 20.0% |
| !! | TGGATAAATTGAATTTATGT+TGG | - | tig0007630:6064-6083 | Msa1345800:CDS | 20.0% |
| !!! | AATGATGTTTTAATTAATCC+AGG | + | tig0007630:7185-7204 | None:intergenic | 20.0% |
| !! | TTAGCAGAAAAAAAAGTAAA+GGG | + | tig0007630:7441-7460 | None:intergenic | 20.0% |
| !! | ATTAGCAGAAAAAAAAGTAA+AGG | + | tig0007630:7442-7461 | None:intergenic | 20.0% |
| !!! | TAATACCTAATAGTTCTTTT+TGG | - | tig0007630:7458-7477 | Msa1345800:intron | 20.0% |
| !!! | TTCTCTCTCTTTTTTTATTA+AGG | - | tig0007630:7750-7769 | Msa1345800:intron | 20.0% |
| !! | TAAATTTATGCCTGAATTAT+AGG | - | tig0007630:8005-8024 | Msa1345800:intron | 20.0% |
| !! | CTAGTTAAAAAAAATGCAAA+AGG | + | tig0007630:8253-8272 | None:intergenic | 20.0% |
| !! | GTTGAATAATTAATTGTACA+GGG | + | tig0007630:8279-8298 | None:intergenic | 20.0% |
| !!! | TTAATTTCTTTGTTGTATGA+TGG | - | tig0007630:8683-8702 | Msa1345800:intron | 20.0% |
| !!! | TATTTGAATTGTTCTGATTT+TGG | - | tig0007630:8911-8930 | Msa1345800:intron | 20.0% |
| !! | GTTAAAAACATTCTATTGAA+AGG | + | tig0007630:9293-9312 | None:intergenic | 20.0% |
| !! | TATATATCATCACATGATAA+AGG | + | tig0007630:9433-9452 | None:intergenic | 20.0% |
| ! | TGAATGTATTCAAATGGAAT+GGG | + | tig0007630:252-271 | None:intergenic | 25.0% |
| !!! | TTCTTCATTTTCAACTTGTT+TGG | - | tig0007630:277-296 | Msa1345800:CDS | 25.0% |
| !!! | TCTTCATTTTCAACTTGTTT+GGG | - | tig0007630:278-297 | Msa1345800:CDS | 25.0% |
| ! | ATGAAGATTTGTATTAAGTG+CGG | - | tig0007630:754-773 | Msa1345800:intron | 25.0% |
| !!! | AATTTGTAGGATTTTAGTGA+TGG | - | tig0007630:828-847 | Msa1345800:intron | 25.0% |
| !! | ATGATTTTCACTGCTAATTT+AGG | - | tig0007630:1175-1194 | Msa1345800:intron | 25.0% |
| !!! | GGATTATTTTGTGATTGATT+AGG | - | tig0007630:1255-1274 | Msa1345800:intron | 25.0% |
| !! | ATGAATTTTTATAGACCCAA+CGG | - | tig0007630:1374-1393 | Msa1345800:intron | 25.0% |
| ! | ATACAACAATGAAAGTCAAA+AGG | + | tig0007630:1694-1713 | None:intergenic | 25.0% |
| !! | GCCTTCTAAATTTTATAGAT+TGG | - | tig0007630:1868-1887 | Msa1345800:intron | 25.0% |
| !!! | GATTTTGGGAAGAAATAAAT+AGG | - | tig0007630:2080-2099 | Msa1345800:intron | 25.0% |
| ! | TCATCGTAATTGATTAATAC+GGG | + | tig0007630:2270-2289 | None:intergenic | 25.0% |
| ! | ATTCTACTCATCCTAATAAT+TGG | - | tig0007630:2453-2472 | Msa1345800:intron | 25.0% |
| ! | GAAATTTCTCTCCAATTATT+AGG | + | tig0007630:2467-2486 | None:intergenic | 25.0% |
| !! | AAATCTTGACACCTTTTTAA+AGG | - | tig0007630:2595-2614 | Msa1345800:intron | 25.0% |
| !! | CAAATGAGATTCCTTTAAAA+AGG | + | tig0007630:2609-2628 | None:intergenic | 25.0% |
| ! | GTTTATATCTGCTTATATGA+TGG | + | tig0007630:2936-2955 | None:intergenic | 25.0% |
| !! | TTATTTTCAAAAACTGCCAA+TGG | - | tig0007630:3013-3032 | Msa1345800:intron | 25.0% |
| ! | TAAAAAGACAACAAACTCAA+TGG | + | tig0007630:3209-3228 | None:intergenic | 25.0% |
| !!! | ATATTAACTGCGTTTTGTTT+TGG | - | tig0007630:3322-3341 | Msa1345800:intron | 25.0% |
| !!! | TATTAACTGCGTTTTGTTTT+GGG | - | tig0007630:3323-3342 | Msa1345800:intron | 25.0% |
| !!! | TACAAAAGGTATTTTTTCCT+TGG | - | tig0007630:3785-3804 | Msa1345800:intron | 25.0% |
| ! | TGTTCAGAAAAATACCATAT+TGG | + | tig0007630:4006-4025 | None:intergenic | 25.0% |
| ! | TAATATTGTGGGTAAATTTC+AGG | - | tig0007630:4098-4117 | Msa1345800:intron | 25.0% |
| ! | CAAGAAAAATATATCAAGGA+TGG | + | tig0007630:4252-4271 | None:intergenic | 25.0% |
| ! | CACTCAAGAAAAATATATCA+AGG | + | tig0007630:4256-4275 | None:intergenic | 25.0% |
| ! | AAAAGTCAGAATACTGTTAT+TGG | - | tig0007630:4278-4297 | Msa1345800:intron | 25.0% |
| ! | AATGATAAATACAGATTGAC+AGG | + | tig0007630:4588-4607 | None:intergenic | 25.0% |
| ! | CAATCTGAAAAGAAAATTAC+AGG | + | tig0007630:4679-4698 | None:intergenic | 25.0% |
| !! | AAAGATTCTGAAAATTTGTG+AGG | - | tig0007630:4745-4764 | Msa1345800:intron | 25.0% |
| !! | AGTCTTTTAACCAAAATACT+AGG | - | tig0007630:4969-4988 | Msa1345800:CDS | 25.0% |
| !! | GTCTTTTAACCAAAATACTA+GGG | - | tig0007630:4970-4989 | Msa1345800:CDS | 25.0% |
| ! | TACTACTTGATTATTGTGAA+TGG | + | tig0007630:5108-5127 | None:intergenic | 25.0% |
| ! | AATAATCAAGTAGTATGCAT+GGG | - | tig0007630:5113-5132 | Msa1345800:CDS | 25.0% |
| ! | ATTATTTCATATTTGGGTAC+AGG | - | tig0007630:5232-5251 | Msa1345800:intron | 25.0% |
| ! | GCAAACATTTATCAGATATT+AGG | + | tig0007630:5436-5455 | None:intergenic | 25.0% |
| !! | GTTTTCAGTTACTCAAATTT+AGG | + | tig0007630:5637-5656 | None:intergenic | 25.0% |
| !!! | TATTTTTGAATGAATGATGG+AGG | - | tig0007630:6214-6233 | Msa1345800:intron | 25.0% |
| !!! | GAAGTGATAAGTTTTAAAAG+TGG | - | tig0007630:6262-6281 | Msa1345800:intron | 25.0% |
| !!! | TCCTTTTAATTCAATTCCTT+GGG | + | tig0007630:6357-6376 | None:intergenic | 25.0% |
| !!! | TTCCTTTTAATTCAATTCCT+TGG | + | tig0007630:6358-6377 | None:intergenic | 25.0% |
| ! | AAGGAATTGAATTAAAAGGA+AGG | - | tig0007630:6357-6376 | Msa1345800:CDS | 25.0% |
| !! | ATTTGAGGTTGTTATAGATA+GGG | + | tig0007630:6610-6629 | None:intergenic | 25.0% |
| !! | TATTTGAGGTTGTTATAGAT+AGG | + | tig0007630:6611-6630 | None:intergenic | 25.0% |
| ! | AGAAGTTAGTTAGTTATTTG+AGG | + | tig0007630:6625-6644 | None:intergenic | 25.0% |
| ! | AGACATTAGAGTAGTTAAAA+TGG | + | tig0007630:6669-6688 | None:intergenic | 25.0% |
| ! | CAAGTTTAGAAATAGAAAAG+CGG | + | tig0007630:6723-6742 | None:intergenic | 25.0% |
| !!! | ATGTTTGAGATTTGTCTTTT+TGG | - | tig0007630:6823-6842 | Msa1345800:intron | 25.0% |
| !!! | ATGTTTTAATTAATCCAGGA+TGG | + | tig0007630:7181-7200 | None:intergenic | 25.0% |
| !!! | TTCAGTGTTTATCTTTTTTG+AGG | - | tig0007630:7336-7355 | Msa1345800:intron | 25.0% |
| !!! | TTCCAATTTTGAAGATACTT+CGG | + | tig0007630:7362-7381 | None:intergenic | 25.0% |
| ! | AGAAACCAAAAAGAACTATT+AGG | + | tig0007630:7466-7485 | None:intergenic | 25.0% |
| !! | TCACTATTTTCTATCTATTG+TGG | - | tig0007630:7548-7567 | Msa1345800:intron | 25.0% |
| !! | CACTATTTTCTATCTATTGT+GGG | - | tig0007630:7549-7568 | Msa1345800:intron | 25.0% |
| ! | AGACAACAAAACAAAACTAT+TGG | + | tig0007630:7694-7713 | None:intergenic | 25.0% |
| ! | ACCATCTCAACATTATTTAA+TGG | - | tig0007630:7892-7911 | Msa1345800:intron | 25.0% |
| !!! | CAAAGTTAACTACTTTTTGT+CGG | - | tig0007630:7921-7940 | Msa1345800:intron | 25.0% |
| !! | TGGTTAATTTTGTCTAGAAA+TGG | + | tig0007630:7948-7967 | None:intergenic | 25.0% |
| ! | TGTAAATCTGAAAAAGAAGT+TGG | + | tig0007630:7977-7996 | None:intergenic | 25.0% |
| ! | CGTTGAATAATTAATTGTAC+AGG | + | tig0007630:8280-8299 | None:intergenic | 25.0% |
| !! | ATTCAACGTTTTACACATAT+TGG | - | tig0007630:8292-8311 | Msa1345800:intron | 25.0% |
| ! | ATAAATCTTGTGGTTGAAAT+AGG | - | tig0007630:8468-8487 | Msa1345800:intron | 25.0% |
| ! | AGTATACATTCATCTCATTA+TGG | + | tig0007630:8619-8638 | None:intergenic | 25.0% |
| ! | TAATGAGATGAATGTATACT+TGG | - | tig0007630:8619-8638 | Msa1345800:intron | 25.0% |
| ! | AGTCAGTAACATATACATAT+GGG | + | tig0007630:8728-8747 | None:intergenic | 25.0% |
| ! | AACTTCATATTTATGTCATC+TGG | - | tig0007630:8818-8837 | Msa1345800:intron | 25.0% |
| !!! | TTGCTACTTTAGAAACAAAA+AGG | + | tig0007630:8969-8988 | None:intergenic | 25.0% |
| ! | AAAAATTCTGTTATGTTTGC+TGG | - | tig0007630:9553-9572 | Msa1345800:five_prime_UTR | 25.0% |
| ! | TTCTTTAGTATAAAAGGCTT+TGG | + | tig0007630:9664-9683 | None:intergenic | 25.0% |
| ! | TGAAGCTTCTTTAGTATAAA+AGG | + | tig0007630:9670-9689 | None:intergenic | 25.0% |
| CTATATCGAGAAAGGAAAAA+AGG | + | tig0007630:200-219 | None:intergenic | 30.0% | |
| AGAAAAGTCTATATCGAGAA+AGG | + | tig0007630:208-227 | None:intergenic | 30.0% | |
| CTGAATGTATTCAAATGGAA+TGG | + | tig0007630:253-272 | None:intergenic | 30.0% | |
| AGACTCTGAATGTATTCAAA+TGG | + | tig0007630:258-277 | None:intergenic | 30.0% | |
| !!! | GTTTTAGTTATATGTAGCAC+CGG | - | tig0007630:588-607 | Msa1345800:CDS | 30.0% |
| CATACACCAACAAAATTTAC+TGG | + | tig0007630:677-696 | None:intergenic | 30.0% | |
| TGATTCATTTGTATTCAGTG+CGG | - | tig0007630:721-740 | Msa1345800:intron | 30.0% | |
| TGAAGATTTGTATTAAGTGC+GGG | - | tig0007630:755-774 | Msa1345800:intron | 30.0% | |
| ! | AATGCTGAATGCTAATTTGT+AGG | - | tig0007630:815-834 | Msa1345800:intron | 30.0% |
| TTTGTTGAAAGTTGCTTGAT+TGG | - | tig0007630:1111-1130 | Msa1345800:intron | 30.0% | |
| ! | ACTGCTAATTTAGGACATAA+TGG | - | tig0007630:1184-1203 | Msa1345800:intron | 30.0% |
| ATAGAAAAAAATACTCACGC+CGG | - | tig0007630:1314-1333 | Msa1345800:intron | 30.0% | |
| TCCTAAATATAAGAGACAGT+TGG | - | tig0007630:1337-1356 | Msa1345800:intron | 30.0% | |
| ACCAACTGTCTCTTATATTT+AGG | + | tig0007630:1341-1360 | None:intergenic | 30.0% | |
| ATTTGTAAATCGAACATGTC+CGG | + | tig0007630:1595-1614 | None:intergenic | 30.0% | |
| GACATGTTCGATTTACAAAT+AGG | - | tig0007630:1595-1614 | Msa1345800:intron | 30.0% | |
| CTAAATTACCTTCCACAAAT+AGG | + | tig0007630:1752-1771 | None:intergenic | 30.0% | |
| CTATTTGTGGAAGGTAATTT+AGG | - | tig0007630:1750-1769 | Msa1345800:intron | 30.0% | |
| AAGTACTTCTCCTTCATATA+GGG | + | tig0007630:1844-1863 | None:intergenic | 30.0% | |
| ! | AAAGTACTTCTCCTTCATAT+AGG | + | tig0007630:1845-1864 | None:intergenic | 30.0% |
| !!! | TATGAAGGAGAAGTACTTTT+TGG | - | tig0007630:1846-1865 | Msa1345800:intron | 30.0% |
| ! | TTTTATAGATTGGATGTTGC+TGG | - | tig0007630:1878-1897 | Msa1345800:intron | 30.0% |
| ! | TTAACAAATGTTCTCTGGAA+AGG | + | tig0007630:1985-2004 | None:intergenic | 30.0% |
| TTGGGAATTCAGAATGTAAT+AGG | + | tig0007630:2040-2059 | None:intergenic | 30.0% | |
| TAAATAGGGAAAACAGAGAT+TGG | - | tig0007630:2095-2114 | Msa1345800:intron | 30.0% | |
| ! | TGGAAGTAAGTTTTTATGTG+TGG | - | tig0007630:2164-2183 | Msa1345800:CDS | 30.0% |
| ! | GGAAGTAAGTTTTTATGTGT+GGG | - | tig0007630:2165-2184 | Msa1345800:CDS | 30.0% |
| ! | GAAGTAAGTTTTTATGTGTG+GGG | - | tig0007630:2166-2185 | Msa1345800:CDS | 30.0% |
| GATTAATACGGGATAATATG+TGG | + | tig0007630:2259-2278 | None:intergenic | 30.0% | |
| GTAAGATGACATTACTTTGT+TGG | + | tig0007630:2372-2391 | None:intergenic | 30.0% | |
| ATCTTACCAATCTTGTGTAA+CGG | - | tig0007630:2385-2404 | Msa1345800:intron | 30.0% | |
| TTGTTTGTTTGGTAGAAATG+GGG | + | tig0007630:2489-2508 | None:intergenic | 30.0% | |
| GTTGTTTGTTTGGTAGAAAT+GGG | + | tig0007630:2490-2509 | None:intergenic | 30.0% | |
| ! | TGTTGTTTGTTTGGTAGAAA+TGG | + | tig0007630:2491-2510 | None:intergenic | 30.0% |
| GTCAAGATTTACACATAGTA+TGG | + | tig0007630:2585-2604 | None:intergenic | 30.0% | |
| GTTGTAAATGATAGCATACA+AGG | + | tig0007630:2705-2724 | None:intergenic | 30.0% | |
| TAAAAAGGAACGAAGTAAGT+TGG | - | tig0007630:2783-2802 | Msa1345800:CDS | 30.0% | |
| TTTCAAAATGCTGAAGAAGA+AGG | - | tig0007630:2839-2858 | Msa1345800:intron | 30.0% | |
| !!! | TTGGCAAGAGTTTTATTTTC+TGG | - | tig0007630:2869-2888 | Msa1345800:intron | 30.0% |
| ! | ATTTTTATATTCGAGACCAG+AGG | - | tig0007630:3159-3178 | Msa1345800:intron | 30.0% |
| ! | TTTTTATATTCGAGACCAGA+GGG | - | tig0007630:3160-3179 | Msa1345800:intron | 30.0% |
| AGAAGTCATGATTGTGATAA+TGG | - | tig0007630:3272-3291 | Msa1345800:intron | 30.0% | |
| ! | AAGAAAGCTACGATTTTTCA+AGG | - | tig0007630:3372-3391 | Msa1345800:intron | 30.0% |
| TAGGCAACAATCATGTATAA+CGG | + | tig0007630:3508-3527 | None:intergenic | 30.0% | |
| TTATACATGATTGTTGCCTA+AGG | - | tig0007630:3508-3527 | Msa1345800:intron | 30.0% | |
| TATACATGATTGTTGCCTAA+GGG | - | tig0007630:3509-3528 | Msa1345800:intron | 30.0% | |
| TCACTTGAATATTAACCCTT+AGG | + | tig0007630:3527-3546 | None:intergenic | 30.0% | |
| !! | CAGAAGTCTATTAGTTTGTT+CGG | - | tig0007630:3606-3625 | Msa1345800:intron | 30.0% |
| !! | AGAAGTCTATTAGTTTGTTC+GGG | - | tig0007630:3607-3626 | Msa1345800:intron | 30.0% |
| GCAATCATATAATGAACTTC+TGG | - | tig0007630:3747-3766 | Msa1345800:intron | 30.0% | |
| !! | CTATATGTTCCCTTTGATTT+TGG | - | tig0007630:3812-3831 | Msa1345800:intron | 30.0% |
| TACCAACTACCAAAATCAAA+GGG | + | tig0007630:3824-3843 | None:intergenic | 30.0% | |
| ! | TCAACATGGTATTCTTTTTG+AGG | - | tig0007630:3977-3996 | Msa1345800:CDS | 30.0% |
| ! | CAACATGGTATTCTTTTTGA+GGG | - | tig0007630:3978-3997 | Msa1345800:CDS | 30.0% |
| !! | AACATGGTATTCTTTTTGAG+GGG | - | tig0007630:3979-3998 | Msa1345800:CDS | 30.0% |
| CTCATGTGGTATAATATTGT+GGG | - | tig0007630:4087-4106 | Msa1345800:intron | 30.0% | |
| !! | GGTTTTCTTATTTCAAGTCA+TGG | - | tig0007630:4126-4145 | Msa1345800:intron | 30.0% |
| CTTAAACCAGATGTATTTGA+TGG | + | tig0007630:4375-4394 | None:intergenic | 30.0% | |
| ! | TGGGATAATTTGTAAATCCA+AGG | - | tig0007630:4404-4423 | Msa1345800:intron | 30.0% |
| !! | AGGCAATATGTTTTTCAATC+AGG | - | tig0007630:4464-4483 | Msa1345800:CDS | 30.0% |
| AAGAAAGAAGAAAACCATCT+CGG | + | tig0007630:4526-4545 | None:intergenic | 30.0% | |
| ATAAATACAGATTGACAGGA+TGG | + | tig0007630:4584-4603 | None:intergenic | 30.0% | |
| ! | TATTCGTTGTGTTTTTCTCT+GGG | - | tig0007630:4708-4727 | Msa1345800:intron | 30.0% |
| ! | TGTAAAGTTCCCTAGTATTT+TGG | + | tig0007630:4982-5001 | None:intergenic | 30.0% |
| ! | TAGTTTAGTAGGTATTGTCA+TGG | - | tig0007630:5056-5075 | Msa1345800:intron | 30.0% |
| CAATAATCAAGTAGTATGCA+TGG | - | tig0007630:5112-5131 | Msa1345800:CDS | 30.0% | |
| ATAATCAAGTAGTATGCATG+GGG | - | tig0007630:5114-5133 | Msa1345800:CDS | 30.0% | |
| GGAACTTTGCATAAAAGAAA+AGG | + | tig0007630:5189-5208 | None:intergenic | 30.0% | |
| ! | TTCTTTTATGCAAAGTTCCA+TGG | - | tig0007630:5190-5209 | Msa1345800:intron | 30.0% |
| TGAGTAACTGAAAACATCAT+TGG | - | tig0007630:5642-5661 | Msa1345800:intron | 30.0% | |
| ! | TTTGATAGCAATTCTCAAGT+TGG | - | tig0007630:5736-5755 | Msa1345800:intron | 30.0% |
| ! | TGGTCTTAAAATATGTAGGT+GGG | + | tig0007630:5795-5814 | None:intergenic | 30.0% |
| !! | TTGGTCTTAAAATATGTAGG+TGG | + | tig0007630:5796-5815 | None:intergenic | 30.0% |
| !! | GTGTTGGTCTTAAAATATGT+AGG | + | tig0007630:5799-5818 | None:intergenic | 30.0% |
| AGGAAATTGTTGATGCATAT+GGG | - | tig0007630:5836-5855 | Msa1345800:intron | 30.0% | |
| !!! | AATGCCATGAAGTTAGTTTT+TGG | - | tig0007630:5938-5957 | Msa1345800:intron | 30.0% |
| TTTCATGAAGTTGGAACATT+GGG | - | tig0007630:5981-6000 | Msa1345800:CDS | 30.0% | |
| ACCCAAGGAATTGAATTAAA+AGG | - | tig0007630:6353-6372 | Msa1345800:CDS | 30.0% | |
| TGAATAGGAGAATCAATGTA+CGG | + | tig0007630:6578-6597 | None:intergenic | 30.0% | |
| ATAGGGCTATTTGTATGAAT+AGG | + | tig0007630:6593-6612 | None:intergenic | 30.0% | |
| TTTAGAAATAGAAAAGCGGT+GGG | + | tig0007630:6719-6738 | None:intergenic | 30.0% | |
| CTTACTAGTTATTATGTTCC+AGG | - | tig0007630:6888-6907 | Msa1345800:intron | 30.0% | |
| ! | CTCTAATTATCCCTTTTTCT+TGG | - | tig0007630:6924-6943 | Msa1345800:intron | 30.0% |
| AACATCATAGCAAATAGGAA+GGG | + | tig0007630:7005-7024 | None:intergenic | 30.0% | |
| AAACATCATAGCAAATAGGA+AGG | + | tig0007630:7006-7025 | None:intergenic | 30.0% | |
| !! | TTCCTATTTGCTATGATGTT+TGG | - | tig0007630:7005-7024 | Msa1345800:intron | 30.0% |
| !! | TCCTATTTGCTATGATGTTT+GGG | - | tig0007630:7006-7025 | Msa1345800:intron | 30.0% |
| CATCATAAAGTGACAATAGA+AGG | - | tig0007630:7113-7132 | Msa1345800:intron | 30.0% | |
| CTATTTATATTACGTCGAAG+TGG | - | tig0007630:7398-7417 | Msa1345800:intron | 30.0% | |
| ! | TCTGTTCCTTTTCACATATT+TGG | - | tig0007630:7593-7612 | Msa1345800:intron | 30.0% |
| ! | TTTTCACATATTTGGTCCAT+CGG | - | tig0007630:7601-7620 | Msa1345800:intron | 30.0% |
| ! | GATGTATGATGCCTTTTTAT+TGG | - | tig0007630:7715-7734 | Msa1345800:intron | 30.0% |
| AAAAAAAGAGAGAGAATCGT+GGG | + | tig0007630:7746-7765 | None:intergenic | 30.0% | |
| TAAAAAAAGAGAGAGAATCG+TGG | + | tig0007630:7747-7766 | None:intergenic | 30.0% | |
| !! | CTTGAATCAAAGAGTATCTT+AGG | + | tig0007630:7819-7838 | None:intergenic | 30.0% |
| CTAAGATACTCTTTGATTCA+AGG | - | tig0007630:7817-7836 | Msa1345800:intron | 30.0% | |
| GCCATTAAATAATGTTGAGA+TGG | + | tig0007630:7896-7915 | None:intergenic | 30.0% | |
| CGACAAAAAGTAGTTAACTT+TGG | + | tig0007630:7923-7942 | None:intergenic | 30.0% | |
| TGAATTACTGCAGAAAAATG+TGG | - | tig0007630:8142-8161 | Msa1345800:intron | 30.0% | |
| GAATTACTGCAGAAAAATGT+GGG | - | tig0007630:8143-8162 | Msa1345800:intron | 30.0% | |
| AATGCTATTATGTTTACCAG+CGG | + | tig0007630:8186-8205 | None:intergenic | 30.0% | |
| !! | GAAAGGTGTTGAAAGAAATA+GGG | + | tig0007630:8211-8230 | None:intergenic | 30.0% |
| ! | CTATTTCTTTCAACACCTTT+CGG | - | tig0007630:8210-8229 | Msa1345800:intron | 30.0% |
| TATTTCTTTCAACACCTTTC+GGG | - | tig0007630:8211-8230 | Msa1345800:intron | 30.0% | |
| ! | TTGAACTAATATCCGTCTTT+TGG | + | tig0007630:8561-8580 | None:intergenic | 30.0% |
| ATATCACCAAGTTCAATTGA+TGG | + | tig0007630:8648-8667 | None:intergenic | 30.0% | |
| ! | AATTGAACTTGGTGATATTC+TGG | - | tig0007630:8650-8669 | Msa1345800:intron | 30.0% |
| ! | ATTGAACTTGGTGATATTCT+GGG | - | tig0007630:8651-8670 | Msa1345800:intron | 30.0% |
| GTCAGTAACATATACATATG+GGG | + | tig0007630:8727-8746 | None:intergenic | 30.0% | |
| CAGTCAGTAACATATACATA+TGG | + | tig0007630:8729-8748 | None:intergenic | 30.0% | |
| AATCATTACTCATTAGTCCT+AGG | + | tig0007630:8776-8795 | None:intergenic | 30.0% | |
| TTTAGCCATAATCTCTTTCA+CGG | - | tig0007630:8846-8865 | Msa1345800:intron | 30.0% | |
| ! | AAAGTAGCAAGCTTTAACTT+TGG | - | tig0007630:8979-8998 | Msa1345800:intron | 30.0% |
| ! | ATAACTCTCACCTTTTATCA+GGG | - | tig0007630:9017-9036 | Msa1345800:intron | 30.0% |
| TATTTCAATGCTCGTTTCTT+TGG | - | tig0007630:9204-9223 | Msa1345800:intron | 30.0% | |
| CCACTTAACAATAATGAGAA+GGG | + | tig0007630:9390-9409 | None:intergenic | 30.0% | |
| ACCACTTAACAATAATGAGA+AGG | + | tig0007630:9391-9410 | None:intergenic | 30.0% | |
| ATTATTGTTAAGTGGTGTAC+TGG | - | tig0007630:9395-9414 | Msa1345800:CDS | 30.0% | |
| TCTTCAACACATGATGCTTA+TGG | + | tig0007630:119-138 | None:intergenic | 35.0% | |
| ! | AAAGGAAAAAAGGTGTAGGA+TGG | + | tig0007630:190-209 | None:intergenic | 35.0% |
| ! | ATGAACTTTTCCATTTTCCC+GGG | + | tig0007630:347-366 | None:intergenic | 35.0% |
| ! | GATGAACTTTTCCATTTTCC+CGG | + | tig0007630:348-367 | None:intergenic | 35.0% |
| GAGTTCACCTAAATAGGAAA+CGG | + | tig0007630:456-475 | None:intergenic | 35.0% | |
| GTTTCCTATTTAGGTGAACT+CGG | - | tig0007630:455-474 | Msa1345800:intron | 35.0% | |
| ! | ACCAGTCCAGTAAATTTTGT+TGG | - | tig0007630:668-687 | Msa1345800:CDS | 35.0% |
| ACCAACAAAATTTACTGGAC+TGG | + | tig0007630:672-691 | None:intergenic | 35.0% | |
| GATTCATTTGTATTCAGTGC+GGG | - | tig0007630:722-741 | Msa1345800:intron | 35.0% | |
| ! | AGAATTTAGAGTGACTGATC+TGG | - | tig0007630:866-885 | Msa1345800:intron | 35.0% |
| ! | GAATTTAGAGTGACTGATCT+GGG | - | tig0007630:867-886 | Msa1345800:intron | 35.0% |
| GCATAAACTATTCAGCACAA+AGG | + | tig0007630:906-925 | None:intergenic | 35.0% | |
| ! | ACAAAAGTATGCTCACACTT+TGG | + | tig0007630:937-956 | None:intergenic | 35.0% |
| ! | GTTATGGTTTGAGATTTGTG+AGG | - | tig0007630:976-995 | Msa1345800:intron | 35.0% |
| TGTAAGTTAACCAGGTTCAA+CGG | + | tig0007630:1073-1092 | None:intergenic | 35.0% | |
| TTATGTTGACCATCTTCATC+AGG | - | tig0007630:1213-1232 | Msa1345800:intron | 35.0% | |
| ! | CTGTCTCTTATATTTAGGAC+CGG | + | tig0007630:1336-1355 | None:intergenic | 35.0% |
| AGAATAATAATACTCCCCTC+TGG | + | tig0007630:1416-1435 | None:intergenic | 35.0% | |
| CTCAACAGTTGCTTAAAAAC+TGG | - | tig0007630:1484-1503 | Msa1345800:intron | 35.0% | |
| TTTGTGGAAGGTAATTTAGG+TGG | - | tig0007630:1753-1772 | Msa1345800:intron | 35.0% | |
| ! | TTTTCTTTCCCCCTATATGA+AGG | - | tig0007630:1831-1850 | Msa1345800:intron | 35.0% |
| AGTACTTCTCCTTCATATAG+GGG | + | tig0007630:1843-1862 | None:intergenic | 35.0% | |
| CCTGATTAACAAATGTTCTC+TGG | + | tig0007630:1990-2009 | None:intergenic | 35.0% | |
| ! | CCAGAGAACATTTGTTAATC+AGG | - | tig0007630:1987-2006 | Msa1345800:intron | 35.0% |
| GAATTCCCAACTGTAATGTT+TGG | - | tig0007630:2050-2069 | Msa1345800:intron | 35.0% | |
| CTCATCCAAACATTACAGTT+GGG | + | tig0007630:2058-2077 | None:intergenic | 35.0% | |
| ACTCATCCAAACATTACAGT+TGG | + | tig0007630:2059-2078 | None:intergenic | 35.0% | |
| AACTGTAATGTTTGGATGAG+TGG | - | tig0007630:2058-2077 | Msa1345800:intron | 35.0% | |
| !! | ATGTTTGGATGAGTGGATTT+TGG | - | tig0007630:2065-2084 | Msa1345800:intron | 35.0% |
| !! | TGTTTGGATGAGTGGATTTT+GGG | - | tig0007630:2066-2085 | Msa1345800:intron | 35.0% |
| ! | TTTTCACCGTTACACAAGAT+TGG | + | tig0007630:2394-2413 | None:intergenic | 35.0% |
| AGGAAAGAAATTGGAGAGAA+GGG | + | tig0007630:2544-2563 | None:intergenic | 35.0% | |
| GAAATAGGGAGGAAAGAAAT+TGG | + | tig0007630:2553-2572 | None:intergenic | 35.0% | |
| ! | TTCTTTCCTCCCTATTTCTT+TGG | - | tig0007630:2555-2574 | Msa1345800:intron | 35.0% |
| ! | TATGGCTAGCCAAAGAAATA+GGG | + | tig0007630:2567-2586 | None:intergenic | 35.0% |
| ! | AGATTTGAGACCTCTCTATA+CGG | - | tig0007630:2658-2677 | Msa1345800:intron | 35.0% |
| TGAAGAAGAAGGTTCAACTT+TGG | - | tig0007630:2850-2869 | Msa1345800:intron | 35.0% | |
| TCTAGAAAATATACTCCCTC+TGG | + | tig0007630:3178-3197 | None:intergenic | 35.0% | |
| GACTGAAAACAGTGTTATCA+TGG | - | tig0007630:3240-3259 | Msa1345800:intron | 35.0% | |
| TATCACAATCATGACTTCTG+AGG | + | tig0007630:3271-3290 | None:intergenic | 35.0% | |
| CAAGGATCAAGTCAATAAAG+CGG | - | tig0007630:3390-3409 | Msa1345800:intron | 35.0% | |
| AAGGATCAAGTCAATAAAGC+GGG | - | tig0007630:3391-3410 | Msa1345800:intron | 35.0% | |
| !! | TTGTCTTGCTGTTAACAACT+AGG | - | tig0007630:3551-3570 | Msa1345800:intron | 35.0% |
| TCTGACATTACATGTTCTGT+TGG | - | tig0007630:3646-3665 | Msa1345800:intron | 35.0% | |
| CTGACATTACATGTTCTGTT+GGG | - | tig0007630:3647-3666 | Msa1345800:intron | 35.0% | |
| TGTTGGGTTTCTCTTATATC+AGG | - | tig0007630:3663-3682 | Msa1345800:intron | 35.0% | |
| ACTCCAATAGTGACAAACTT+CGG | - | tig0007630:3725-3744 | Msa1345800:intron | 35.0% | |
| AGGGAACATATAGATTTCCA+AGG | + | tig0007630:3805-3824 | None:intergenic | 35.0% | |
| !! | TTCCCTTTGATTTTGGTAGT+TGG | - | tig0007630:3819-3838 | Msa1345800:intron | 35.0% |
| GTACCAACTACCAAAATCAA+AGG | + | tig0007630:3825-3844 | None:intergenic | 35.0% | |
| AATGCCAAATTGTCATCAGA+AGG | + | tig0007630:3894-3913 | None:intergenic | 35.0% | |
| ACGTCACTCAAATATCAACA+TGG | - | tig0007630:3963-3982 | Msa1345800:CDS | 35.0% | |
| GCTCATGTGGTATAATATTG+TGG | - | tig0007630:4086-4105 | Msa1345800:intron | 35.0% | |
| ! | ACCAGATGTATTTGATGGTT+GGG | + | tig0007630:4370-4389 | None:intergenic | 35.0% |
| ! | AACCAGATGTATTTGATGGT+TGG | + | tig0007630:4371-4390 | None:intergenic | 35.0% |
| ! | TCTGGTTTAAGATTCATCAG+TGG | - | tig0007630:4384-4403 | Msa1345800:intron | 35.0% |
| ! | CTGGTTTAAGATTCATCAGT+GGG | - | tig0007630:4385-4404 | Msa1345800:intron | 35.0% |
| TTTGTAAATCCAAGGCTCTT+AGG | - | tig0007630:4412-4431 | Msa1345800:CDS | 35.0% | |
| !! | ATGTTATTTCGTGCTACAAG+AGG | - | tig0007630:4444-4463 | Msa1345800:CDS | 35.0% |
| ! | GTATTCGTTGTGTTTTTCTC+TGG | - | tig0007630:4707-4726 | Msa1345800:intron | 35.0% |
| ! | ATTCGTTGTGTTTTTCTCTG+GGG | - | tig0007630:4709-4728 | Msa1345800:intron | 35.0% |
| ! | CTGAAAATTTGTGAGGCATT+TGG | - | tig0007630:4752-4771 | Msa1345800:intron | 35.0% |
| TTACTTATGTCTTCAGGAAC+AGG | + | tig0007630:4791-4810 | None:intergenic | 35.0% | |
| !! | AGTGAGCTCTAGATAAAGTT+TGG | - | tig0007630:4904-4923 | Msa1345800:intron | 35.0% |
| GAACTTTACATACCTTACCA+AGG | - | tig0007630:4992-5011 | Msa1345800:CDS | 35.0% | |
| AAAACCTGAATACCTTGGTA+AGG | + | tig0007630:5007-5026 | None:intergenic | 35.0% | |
| ATTGCAAAACCTGAATACCT+TGG | + | tig0007630:5012-5031 | None:intergenic | 35.0% | |
| !! | TTCAGGTTTTGCAATCCAAT+AGG | - | tig0007630:5017-5036 | Msa1345800:CDS | 35.0% |
| ! | CAGATGCTCTTTAGTTTAGT+AGG | - | tig0007630:5045-5064 | Msa1345800:intron | 35.0% |
| !! | AGGTATTGTCATGGTTTTTG+TGG | - | tig0007630:5065-5084 | Msa1345800:intron | 35.0% |
| ! | GGTATTGTCATGGTTTTTGT+GGG | - | tig0007630:5066-5085 | Msa1345800:intron | 35.0% |
| ! | GTATTGTCATGGTTTTTGTG+GGG | - | tig0007630:5067-5086 | Msa1345800:intron | 35.0% |
| ! | TTTTGTTAGATGGTCTGCAA+TGG | + | tig0007630:5330-5349 | None:intergenic | 35.0% |
| TTGCAGACCATCTAACAAAA+TGG | - | tig0007630:5330-5349 | Msa1345800:CDS | 35.0% | |
| AGACCATCTAACAAAATGGA+TGG | - | tig0007630:5334-5353 | Msa1345800:CDS | 35.0% | |
| !! | AATCTATTGGTTCAGGATGT+AGG | + | tig0007630:5471-5490 | None:intergenic | 35.0% |
| !! | AGGATGAAATCTATTGGTTC+AGG | + | tig0007630:5478-5497 | None:intergenic | 35.0% |
| GTCACAAAAAAATGTCTCGT+TGG | - | tig0007630:5565-5584 | Msa1345800:CDS | 35.0% | |
| AAAAAAATGTCTCGTTGGAG+AGG | - | tig0007630:5570-5589 | Msa1345800:CDS | 35.0% | |
| AAAAAATGTCTCGTTGGAGA+GGG | - | tig0007630:5571-5590 | Msa1345800:CDS | 35.0% | |
| TCCTATGATTGCAAAAACAC+AGG | - | tig0007630:5600-5619 | Msa1345800:CDS | 35.0% | |
| !! | ACCTGTGTTTTTGCAATCAT+AGG | + | tig0007630:5604-5623 | None:intergenic | 35.0% |
| ! | TTCAATGATTTTCCAGATGC+AGG | - | tig0007630:5693-5712 | Msa1345800:intron | 35.0% |
| TGGCATAATCTTCCATCAAA+TGG | - | tig0007630:5756-5775 | Msa1345800:intron | 35.0% | |
| GGTCTTAAAATATGTAGGTG+GGG | + | tig0007630:5794-5813 | None:intergenic | 35.0% | |
| ! | ATACGGATTTGTGAAAGTGT+TGG | + | tig0007630:5815-5834 | None:intergenic | 35.0% |
| GCATCAACAATTTCCTGATA+CGG | + | tig0007630:5832-5851 | None:intergenic | 35.0% | |
| CAGGAAATTGTTGATGCATA+TGG | - | tig0007630:5835-5854 | Msa1345800:intron | 35.0% | |
| CGGCTACTAAATATAGTCAA+TGG | + | tig0007630:5873-5892 | None:intergenic | 35.0% | |
| CACTCCAAAAACTAACTTCA+TGG | + | tig0007630:5945-5964 | None:intergenic | 35.0% | |
| GTGCATTTGTTTCATGAAGT+TGG | - | tig0007630:5972-5991 | Msa1345800:intron | 35.0% | |
| GTTTCATGAAGTTGGAACAT+TGG | - | tig0007630:5980-5999 | Msa1345800:intron | 35.0% | |
| CCAATTCTACATACACTAGT+CGG | + | tig0007630:6047-6066 | None:intergenic | 35.0% | |
| TTTATGTTGGTACTTGCAAG+TGG | - | tig0007630:6077-6096 | Msa1345800:intron | 35.0% | |
| ACATAAGGTCTACACATTGA+AGG | + | tig0007630:6136-6155 | None:intergenic | 35.0% | |
| CCTTTGCAAACAGAAAAAGT+GGG | - | tig0007630:6312-6331 | Msa1345800:CDS | 35.0% | |
| AGTAATGACTCTACTGTGAA+GGG | + | tig0007630:6518-6537 | None:intergenic | 35.0% | |
| TAGTAATGACTCTACTGTGA+AGG | + | tig0007630:6519-6538 | None:intergenic | 35.0% | |
| GTTTAGAAATAGAAAAGCGG+TGG | + | tig0007630:6720-6739 | None:intergenic | 35.0% | |
| ! | AAGGAAGTTTTACAACCTCT+TGG | + | tig0007630:6767-6786 | None:intergenic | 35.0% |
| ATCATGTGGTTTAACTGCTA+AGG | + | tig0007630:6786-6805 | None:intergenic | 35.0% | |
| TGTTGCAGATACAAATTGTC+TGG | - | tig0007630:6865-6884 | Msa1345800:intron | 35.0% | |
| TAGAGTGTGCAATATAAACC+TGG | + | tig0007630:6909-6928 | None:intergenic | 35.0% | |
| ACATCATAGCAAATAGGAAG+GGG | + | tig0007630:7004-7023 | None:intergenic | 35.0% | |
| !! | CCTATTTGCTATGATGTTTG+GGG | - | tig0007630:7007-7026 | Msa1345800:intron | 35.0% |
| ATAGCACATGAAAACAAGCT+CGG | - | tig0007630:7074-7093 | Msa1345800:intron | 35.0% | |
| AGGATCTGCCAAAATATGTA+TGG | - | tig0007630:7133-7152 | Msa1345800:intron | 35.0% | |
| GGATCTGCCAAAATATGTAT+GGG | - | tig0007630:7134-7153 | Msa1345800:intron | 35.0% | |
| ! | CACATGACCCATACATATTT+TGG | + | tig0007630:7144-7163 | None:intergenic | 35.0% |
| CATTCGAGATTTGTCAAACT+TGG | - | tig0007630:7201-7220 | Msa1345800:intron | 35.0% | |
| GAATCTTTGAACATCAACCA+TGG | + | tig0007630:7265-7284 | None:intergenic | 35.0% | |
| CATGCTAAATACTGAATGCT+CGG | + | tig0007630:7315-7334 | None:intergenic | 35.0% | |
| GATGGACCAAATATGTGAAA+AGG | + | tig0007630:7602-7621 | None:intergenic | 35.0% | |
| ! | GAAAAAGAAGTTGGTTGCTA+TGG | + | tig0007630:7968-7987 | None:intergenic | 35.0% |
| GATTGCTGTGAGAAAATTTG+TGG | + | tig0007630:8074-8093 | None:intergenic | 35.0% | |
| !! | CGAAAGGTGTTGAAAGAAAT+AGG | + | tig0007630:8212-8231 | None:intergenic | 35.0% |
| ATTTCTTTCAACACCTTTCG+GGG | - | tig0007630:8212-8231 | Msa1345800:intron | 35.0% | |
| ! | AACATACATTTTACCCCGAA+AGG | + | tig0007630:8228-8247 | None:intergenic | 35.0% |
| CAAAGTTTATGTTCCCACAA+AGG | + | tig0007630:8364-8383 | None:intergenic | 35.0% | |
| ! | TATTTGCTAAAAGGCCATCT+AGG | - | tig0007630:8443-8462 | Msa1345800:intron | 35.0% |
| CACAAGATTTATAGCCTAGA+TGG | + | tig0007630:8460-8479 | None:intergenic | 35.0% | |
| CATCTAGGCTATAAATCTTG+TGG | - | tig0007630:8458-8477 | Msa1345800:intron | 35.0% | |
| AATCTTGTGGTTGAAATAGG+TGG | - | tig0007630:8471-8490 | Msa1345800:intron | 35.0% | |
| ATCTTGTGGTTGAAATAGGT+GGG | - | tig0007630:8472-8491 | Msa1345800:intron | 35.0% | |
| !! | CTTTTGGAAACTAGCTTCTT+TGG | + | tig0007630:8545-8564 | None:intergenic | 35.0% |
| ! | AGAAGCTAGTTTCCAAAAGA+CGG | - | tig0007630:8546-8565 | Msa1345800:intron | 35.0% |
| TGGAAACCATCAATTGAACT+TGG | - | tig0007630:8639-8658 | Msa1345800:intron | 35.0% | |
| TACTCATTAGTCCTAGGAAA+GGG | + | tig0007630:8770-8789 | None:intergenic | 35.0% | |
| TTACTCATTAGTCCTAGGAA+AGG | + | tig0007630:8771-8790 | None:intergenic | 35.0% | |
| GTAATGATTCACATTCGACT+TGG | - | tig0007630:8787-8806 | Msa1345800:intron | 35.0% | |
| TGTAACCGTGAAAGAGATTA+TGG | + | tig0007630:8854-8873 | None:intergenic | 35.0% | |
| !!! | CTGATTTTGGCTGTTTGTAT+TGG | - | tig0007630:8924-8943 | Msa1345800:intron | 35.0% |
| AAGGAACTTGATTGCATTCT+TGG | + | tig0007630:8950-8969 | None:intergenic | 35.0% | |
| ! | CATAACTCTCACCTTTTATC+AGG | - | tig0007630:9016-9035 | Msa1345800:intron | 35.0% |
| ATGAAGATGTCCATTCTGTT+TGG | - | tig0007630:9147-9166 | Msa1345800:intron | 35.0% | |
| TAACACAGAAGTAATTGCAC+AGG | + | tig0007630:9269-9288 | None:intergenic | 35.0% | |
| ATCTTCCTTAACAGTCTGTT+TGG | - | tig0007630:9356-9375 | Msa1345800:CDS | 35.0% | |
| GATATCCAAACAGACTGTTA+AGG | + | tig0007630:9364-9383 | None:intergenic | 35.0% | |
| CCCTTCTCATTATTGTTAAG+TGG | - | tig0007630:9387-9406 | Msa1345800:CDS | 35.0% | |
| !! | CTGGTTCTTTTCTTCACTTT+TGG | - | tig0007630:9526-9545 | Msa1345800:five_prime_UTR | 35.0% |
| !! | GCAGATTGTGTTATTGCTTT+TGG | - | tig0007630:9609-9628 | Msa1345800:five_prime_UTR | 35.0% |
| ACACATGATGCTTATGGTGA+CGG | + | tig0007630:113-132 | None:intergenic | 40.0% | |
| ! | CGAGAAAGGAAAAAAGGTGT+AGG | + | tig0007630:194-213 | None:intergenic | 40.0% |
| TTGAACGAAGGTCATCTTCT+CGG | + | tig0007630:402-421 | None:intergenic | 40.0% | |
| AAGACCGAGTTCACCTAAAT+AGG | + | tig0007630:462-481 | None:intergenic | 40.0% | |
| ATGAATGAGCTCGGAAAGTT+GGG | + | tig0007630:518-537 | None:intergenic | 40.0% | |
| AATGAATGAGCTCGGAAAGT+TGG | + | tig0007630:519-538 | None:intergenic | 40.0% | |
| GAGTGCATAATGAATGAGCT+CGG | + | tig0007630:527-546 | None:intergenic | 40.0% | |
| !! | AGGATTTTAGTGATGGTGTG+TGG | - | tig0007630:835-854 | Msa1345800:intron | 40.0% |
| ! | GGTTTGAGATTTGTGAGGTA+TGG | - | tig0007630:981-1000 | Msa1345800:intron | 40.0% |
| AGTTTCATTACCGTTGAACC+TGG | - | tig0007630:1060-1079 | Msa1345800:intron | 40.0% | |
| CTGAAAGCTGTAAGTTAACC+AGG | + | tig0007630:1081-1100 | None:intergenic | 40.0% | |
| CCTAAGTTTATGAGACCGTT+GGG | + | tig0007630:1392-1411 | None:intergenic | 40.0% | |
| TCCTAAGTTTATGAGACCGT+TGG | + | tig0007630:1393-1412 | None:intergenic | 40.0% | |
| TCTCATAAACTTAGGACCAG+AGG | - | tig0007630:1397-1416 | Msa1345800:intron | 40.0% | |
| CTCATAAACTTAGGACCAGA+GGG | - | tig0007630:1398-1417 | Msa1345800:intron | 40.0% | |
| TCATAAACTTAGGACCAGAG+GGG | - | tig0007630:1399-1418 | Msa1345800:intron | 40.0% | |
| TGAGAAATGCCATAAGTCGT+TGG | - | tig0007630:1533-1552 | Msa1345800:intron | 40.0% | |
| AAATCGAACATGTCCGGATA+AGG | + | tig0007630:1589-1608 | None:intergenic | 40.0% | |
| GTACTTCTCCTTCATATAGG+GGG | + | tig0007630:1842-1861 | None:intergenic | 40.0% | |
| ! | TCTTTTGTCTGGATGCTGTA+CGG | - | tig0007630:2134-2153 | Msa1345800:CDS | 40.0% |
| ! | GGAGTAGAGATCTTTTTGCT+GGG | + | tig0007630:2192-2211 | None:intergenic | 40.0% |
| ! | TGGAGTAGAGATCTTTTTGC+TGG | + | tig0007630:2193-2212 | None:intergenic | 40.0% |
| CAAAAAGATCTCTACTCCAG+TGG | - | tig0007630:2194-2213 | Msa1345800:CDS | 40.0% | |
| ! | CCAGTGGAAAGACTTTTGTA+CGG | - | tig0007630:2210-2229 | Msa1345800:CDS | 40.0% |
| GGATGAGTAGAATAGTGAGT+AGG | + | tig0007630:2446-2465 | None:intergenic | 40.0% | |
| GAGGAAAGAAATTGGAGAGA+AGG | + | tig0007630:2545-2564 | None:intergenic | 40.0% | |
| ! | GTATGGCTAGCCAAAGAAAT+AGG | + | tig0007630:2568-2587 | None:intergenic | 40.0% |
| AATGGAATGAGTTCCCATGA+GGG | - | tig0007630:3031-3050 | Msa1345800:intron | 40.0% | |
| AAATCCTCCAAGTCAATGTC+CGG | + | tig0007630:3448-3467 | None:intergenic | 40.0% | |
| !! | CATTGACTTGGAGGATTTAG+AGG | - | tig0007630:3450-3469 | Msa1345800:intron | 40.0% |
| ATGAGCACCAACTTAAGGTA+TGG | + | tig0007630:3582-3601 | None:intergenic | 40.0% | |
| GAGTAATGAGCACCAACTTA+AGG | + | tig0007630:3587-3606 | None:intergenic | 40.0% | |
| ! | TGTTCGGGCATTTTCAGTTT+TGG | - | tig0007630:3622-3641 | Msa1345800:intron | 40.0% |
| TTGCCGAAGTTTGTCACTAT+TGG | + | tig0007630:3731-3750 | None:intergenic | 40.0% | |
| TGGTCCTTCTGATGACAATT+TGG | - | tig0007630:3887-3906 | Msa1345800:intron | 40.0% | |
| !! | TCTTTTTGAGGGGACCAATA+TGG | - | tig0007630:3989-4008 | Msa1345800:CDS | 40.0% |
| GACAGCATCTTTACTTGAAC+AGG | - | tig0007630:4212-4231 | Msa1345800:CDS | 40.0% | |
| ! | CCAGATGTATTTGATGGTTG+GGG | + | tig0007630:4369-4388 | None:intergenic | 40.0% |
| AAAACCATCTCGGTTGTAAC+AGG | + | tig0007630:4516-4535 | None:intergenic | 40.0% | |
| TCTGAATCACTGTGTAGACA+GGG | + | tig0007630:4654-4673 | None:intergenic | 40.0% | |
| CCTGAAGACATAAGTAAGCA+CGG | - | tig0007630:4794-4813 | Msa1345800:intron | 40.0% | |
| CTGAAGACATAAGTAAGCAC+GGG | - | tig0007630:4795-4814 | Msa1345800:intron | 40.0% | |
| TAAGCACGGGCAAATAACTA+GGG | - | tig0007630:4808-4827 | Msa1345800:intron | 40.0% | |
| ! | CATACCTTACCAAGGTATTC+AGG | - | tig0007630:5000-5019 | Msa1345800:CDS | 40.0% |
| ! | GGTTTTGCAATCCAATAGGT+TGG | - | tig0007630:5021-5040 | Msa1345800:intron | 40.0% |
| ! | GGTCCATCCATTTTGTTAGA+TGG | + | tig0007630:5340-5359 | None:intergenic | 40.0% |
| TCTAACAAAATGGATGGACC+TGG | - | tig0007630:5340-5359 | Msa1345800:CDS | 40.0% | |
| TACAGAAGCAAACTCTTACC+AGG | + | tig0007630:5361-5380 | None:intergenic | 40.0% | |
| GCGACAAGGATGAAATCTAT+TGG | + | tig0007630:5484-5503 | None:intergenic | 40.0% | |
| ! | AATGATTTTCCAGATGCAGG+AGG | - | tig0007630:5696-5715 | Msa1345800:intron | 40.0% |
| ATTCCACTGCATCCATTTGA+TGG | + | tig0007630:5771-5790 | None:intergenic | 40.0% | |
| CACTTTCACAAATCCGTATC+AGG | - | tig0007630:5816-5835 | Msa1345800:intron | 40.0% | |
| TATGCAATGCCTCTGCTAAA+AGG | - | tig0007630:6010-6029 | Msa1345800:CDS | 40.0% | |
| CCGACTAGTGTATGTAGAAT+TGG | - | tig0007630:6044-6063 | Msa1345800:CDS | 40.0% | |
| GGATAACAAACTCCGTATAC+TGG | - | tig0007630:6235-6254 | Msa1345800:intron | 40.0% | |
| TAACAAACTCCGTATACTGG+AGG | - | tig0007630:6238-6257 | Msa1345800:intron | 40.0% | |
| ATCACTTCACCTCCAGTATA+CGG | + | tig0007630:6250-6269 | None:intergenic | 40.0% | |
| GCCTTTGCAAACAGAAAAAG+TGG | - | tig0007630:6311-6330 | Msa1345800:CDS | 40.0% | |
| !!! | CCCACTTTTTCTGTTTGCAA+AGG | + | tig0007630:6315-6334 | None:intergenic | 40.0% |
| GTAATGACTCTACTGTGAAG+GGG | + | tig0007630:6517-6536 | None:intergenic | 40.0% | |
| GATCTGAATGTATGTCCAAG+AGG | - | tig0007630:6749-6768 | Msa1345800:intron | 40.0% | |
| !! | TGTCTTTTTGGATCGAGTTG+AGG | - | tig0007630:6835-6854 | Msa1345800:intron | 40.0% |
| !!! | GTCTTTTTGGATCGAGTTGA+GGG | - | tig0007630:6836-6855 | Msa1345800:intron | 40.0% |
| TGCAACACTGCCAAGAAAAA+GGG | + | tig0007630:6937-6956 | None:intergenic | 40.0% | |
| TTGCAACACTGCCAAGAAAA+AGG | + | tig0007630:6938-6957 | None:intergenic | 40.0% | |
| ! | AAACTGCAGGATTTGCTTCT+TGG | + | tig0007630:6965-6984 | None:intergenic | 40.0% |
| CCCCAAACATCATAGCAAAT+AGG | + | tig0007630:7010-7029 | None:intergenic | 40.0% | |
| ACATATGTTATGCTCCATCC+TGG | - | tig0007630:7164-7183 | Msa1345800:intron | 40.0% | |
| AACTTTAAGTAGGGTCACCA+TGG | - | tig0007630:7245-7264 | Msa1345800:intron | 40.0% | |
| ! | GGCCGAAGTATCTTCAAAAT+TGG | - | tig0007630:7357-7376 | Msa1345800:intron | 40.0% |
| !!! | TTTTGGTTTCTTCCAGAAGC+TGG | - | tig0007630:7475-7494 | Msa1345800:intron | 40.0% |
| ! | TTTGGTTTCTTCCAGAAGCT+GGG | - | tig0007630:7476-7495 | Msa1345800:intron | 40.0% |
| ! | GGTGTGTTCTATTTCTCTCT+TGG | - | tig0007630:7651-7670 | Msa1345800:intron | 40.0% |
| ACTATTGGCACCATAGTTAG+AGG | + | tig0007630:7679-7698 | None:intergenic | 40.0% | |
| CGTGGGATTCTCCAATAAAA+AGG | + | tig0007630:7729-7748 | None:intergenic | 40.0% | |
| TATGTTTACCAGCGGAAAGA+CGG | + | tig0007630:8178-8197 | None:intergenic | 40.0% | |
| TTGAAATGCAAGGCTGTAAG+GGG | + | tig0007630:8392-8411 | None:intergenic | 40.0% | |
| GTTGAAATGCAAGGCTGTAA+GGG | + | tig0007630:8393-8412 | None:intergenic | 40.0% | |
| TTGCATTTCAACCAACAGCA+GGG | - | tig0007630:8401-8420 | Msa1345800:intron | 40.0% | |
| !! | TGGTTGAAATAGGTGGGTTT+TGG | - | tig0007630:8478-8497 | Msa1345800:intron | 40.0% |
| !! | GGTTGAAATAGGTGGGTTTT+GGG | - | tig0007630:8479-8498 | Msa1345800:intron | 40.0% |
| !!! | GTTTTGGGAGTAGAGATCAT+AGG | - | tig0007630:8494-8513 | Msa1345800:intron | 40.0% |
| ! | ACTAGCTTCTTTGGTCAATC+AGG | + | tig0007630:8536-8555 | None:intergenic | 40.0% |
| ! | TTTTCCTTAGTCCCTTTCCT+AGG | - | tig0007630:8756-8775 | Msa1345800:intron | 40.0% |
| GTATGTGCATCCCTGATAAA+AGG | + | tig0007630:9030-9049 | None:intergenic | 40.0% | |
| ATCAGGGATGCACATACTAT+TGG | - | tig0007630:9033-9052 | Msa1345800:intron | 40.0% | |
| ATGGATCACGGTATTTGACT+AGG | + | tig0007630:9059-9078 | None:intergenic | 40.0% | |
| TTGGAAGCTCACTGGATATA+AGG | - | tig0007630:9223-9242 | Msa1345800:intron | 40.0% | |
| AGATCATCTGTGGCACAAAT+TGG | + | tig0007630:9340-9359 | None:intergenic | 40.0% | |
| CTGTTAAGGAAGATCATCTG+TGG | + | tig0007630:9350-9369 | None:intergenic | 40.0% | |
| TTGGTGAGAATCAGTTGTTC+TGG | - | tig0007630:9477-9496 | Msa1345800:five_prime_UTR | 40.0% | |
| TGGTGAGAATCAGTTGTTCT+GGG | - | tig0007630:9478-9497 | Msa1345800:five_prime_UTR | 40.0% | |
| CTCATACTTGAAGTGGTCTT+TGG | + | tig0007630:9505-9524 | None:intergenic | 40.0% | |
| AACCAGACTCATACTTGAAG+TGG | + | tig0007630:9512-9531 | None:intergenic | 40.0% | |
| TGGCTATTATTGCAGTTCCA+TGG | - | tig0007630:9629-9648 | Msa1345800:five_prime_UTR | 40.0% | |
| ! | TCCATTTTCTCGACGTTTCC+CGG | - | tig0007630:326-345 | Msa1345800:CDS | 45.0% |
| ! | AGGGATGATGAGTTGAACGA+AGG | + | tig0007630:414-433 | None:intergenic | 45.0% |
| !! | CATCGTGCCGTTTCCTATTT+AGG | - | tig0007630:446-465 | Msa1345800:intron | 45.0% |
| CGGAAAGTTGGGATCTGAAA+TGG | + | tig0007630:507-526 | None:intergenic | 45.0% | |
| ! | CGTGTTTAATCCAGAAGTGC+CGG | + | tig0007630:610-629 | None:intergenic | 45.0% |
| GTTGGTGTATGTGTCGTGTT+CGG | - | tig0007630:686-705 | Msa1345800:CDS | 45.0% | |
| TACCACATGCCTGATGAAGA+TGG | + | tig0007630:1225-1244 | None:intergenic | 45.0% | |
| CCCAACGGTCTCATAAACTT+AGG | - | tig0007630:1389-1408 | Msa1345800:intron | 45.0% | |
| ! | CTCACGTGTAGAAGTGTAGA+TGG | + | tig0007630:1517-1536 | None:intergenic | 45.0% |
| AATGCCATAAGTCGTTGGAG+TGG | - | tig0007630:1538-1557 | Msa1345800:intron | 45.0% | |
| ACTACCACTCCAACGACTTA+TGG | + | tig0007630:1545-1564 | None:intergenic | 45.0% | |
| GATAAGGACAACCTAGATCC+TGG | + | tig0007630:1573-1592 | None:intergenic | 45.0% | |
| GGATCTAGGTTGTCCTTATC+CGG | - | tig0007630:1573-1592 | Msa1345800:intron | 45.0% | |
| TGTCCAACTGCACCTATTTG+TGG | - | tig0007630:1737-1756 | Msa1345800:intron | 45.0% | |
| CTTCCACAAATAGGTGCAGT+TGG | + | tig0007630:1743-1762 | None:intergenic | 45.0% | |
| CAACTGCACCTATTTGTGGA+AGG | - | tig0007630:1741-1760 | Msa1345800:intron | 45.0% | |
| TCTGGATGCTGTACGGAAAA+TGG | - | tig0007630:2141-2160 | Msa1345800:CDS | 45.0% | |
| CCGTACAAAAGTCTTTCCAC+TGG | + | tig0007630:2213-2232 | None:intergenic | 45.0% | |
| ! | AAGACTTTTGTACGGAGCGA+AGG | - | tig0007630:2218-2237 | Msa1345800:CDS | 45.0% |
| CTCATGGGAACTCATTCCAT+TGG | + | tig0007630:3032-3051 | None:intergenic | 45.0% | |
| CAATGGAATGAGTTCCCATG+AGG | - | tig0007630:3030-3049 | Msa1345800:intron | 45.0% | |
| ATGGAATGAGTTCCCATGAG+GGG | - | tig0007630:3032-3051 | Msa1345800:intron | 45.0% | |
| !!! | AACTGCGTTTTGTTTTGGGC+AGG | - | tig0007630:3327-3346 | Msa1345800:intron | 45.0% |
| GGTGATGCCATACCTTAAGT+TGG | - | tig0007630:3572-3591 | Msa1345800:intron | 45.0% | |
| ! | ATGAGCAGCAGAAAGCATAG+AGG | + | tig0007630:4072-4091 | None:intergenic | 45.0% |
| TATGCTTTCTGCTGCTCATG+TGG | - | tig0007630:4073-4092 | Msa1345800:intron | 45.0% | |
| TTCAGGCGAGATAGAACTAC+AGG | - | tig0007630:4158-4177 | Msa1345800:CDS | 45.0% | |
| CCCCAACCATCAAATACATC+TGG | - | tig0007630:4366-4385 | Msa1345800:intron | 45.0% | |
| CCTTTCAAACCTAAGAGCCT+TGG | + | tig0007630:4424-4443 | None:intergenic | 45.0% | |
| CCAAGGCTCTTAGGTTTGAA+AGG | - | tig0007630:4421-4440 | Msa1345800:CDS | 45.0% | |
| !! | TTTTTCAATCAGGCACCAGC+TGG | - | tig0007630:4474-4493 | Msa1345800:CDS | 45.0% |
| TGTCCTATTGCATTCACAGC+TGG | - | tig0007630:4609-4628 | Msa1345800:intron | 45.0% | |
| ACACCAGCTGTGAATGCAAT+AGG | + | tig0007630:4615-4634 | None:intergenic | 45.0% | |
| GTCTGAATCACTGTGTAGAC+AGG | + | tig0007630:4655-4674 | None:intergenic | 45.0% | |
| !! | TGTGTTTTTCTCTGGGGAAC+AGG | - | tig0007630:4715-4734 | Msa1345800:intron | 45.0% |
| CCGTGCTTACTTATGTCTTC+AGG | + | tig0007630:4797-4816 | None:intergenic | 45.0% | |
| GTAAGCACGGGCAAATAACT+AGG | - | tig0007630:4807-4826 | Msa1345800:intron | 45.0% | |
| ! | AGAGCATCTGACCAACCTAT+TGG | + | tig0007630:5035-5054 | None:intergenic | 45.0% |
| CTCTCTTCTTACCTAGGACA+AGG | + | tig0007630:5506-5525 | None:intergenic | 45.0% | |
| GTCCTAGGTAAGAAGAGAGA+AGG | - | tig0007630:5507-5526 | Msa1345800:intron | 45.0% | |
| AGCCTTCTCTCTTCTTACCT+AGG | + | tig0007630:5512-5531 | None:intergenic | 45.0% | |
| CTTCCATCAAATGGATGCAG+TGG | - | tig0007630:5765-5784 | Msa1345800:intron | 45.0% | |
| CATGAAGTTGGAACATTGGG+CGG | - | tig0007630:5984-6003 | Msa1345800:CDS | 45.0% | |
| ! | GTTCATCAGCCTTTTAGCAG+AGG | + | tig0007630:6022-6041 | None:intergenic | 45.0% |
| TGGCACACACAACTTTCTGA+TGG | - | tig0007630:6097-6116 | Msa1345800:intron | 45.0% | |
| ! | GGTCTACACATTGAAGGTGT+AGG | + | tig0007630:6130-6149 | None:intergenic | 45.0% |
| AGAGAGTAATCTCTCCTCCA+AGG | - | tig0007630:6487-6506 | Msa1345800:intron | 45.0% | |
| GAGAGTAATCTCTCCTCCAA+GGG | - | tig0007630:6488-6507 | Msa1345800:intron | 45.0% | |
| ACAACAGTCGTGTAAACTGC+AGG | + | tig0007630:6978-6997 | None:intergenic | 45.0% | |
| TTGCTATGATGTTTGGGGAC+TGG | - | tig0007630:7012-7031 | Msa1345800:intron | 45.0% | |
| TGCTATGATGTTTGGGGACT+GGG | - | tig0007630:7013-7032 | Msa1345800:intron | 45.0% | |
| TCATGGAATTTGCCTGTTGC+TGG | - | tig0007630:7037-7056 | Msa1345800:intron | 45.0% | |
| CATGGAATTTGCCTGTTGCT+GGG | - | tig0007630:7038-7057 | Msa1345800:intron | 45.0% | |
| GAATTAATGCTCCCAGCAAC+AGG | + | tig0007630:7052-7071 | None:intergenic | 45.0% | |
| TGAAAACAAGCTCGGTACAC+AGG | - | tig0007630:7082-7101 | Msa1345800:intron | 45.0% | |
| AGCTTCATGGAGATGCTGTT+TGG | - | tig0007630:7500-7519 | Msa1345800:intron | 45.0% | |
| ! | TTCATGGAGATGCTGTTTGG+TGG | - | tig0007630:7503-7522 | Msa1345800:intron | 45.0% |
| ! | TCATGGAGATGCTGTTTGGT+GGG | - | tig0007630:7504-7523 | Msa1345800:intron | 45.0% |
| GATGTCGTGATACTTCATGC+AGG | - | tig0007630:7630-7649 | Msa1345800:intron | 45.0% | |
| TCTCTTGGAGCCTCTAACTA+TGG | - | tig0007630:7666-7685 | Msa1345800:intron | 45.0% | |
| GGTTTAGATTCCTCAGTCCA+GGG | + | tig0007630:7875-7894 | None:intergenic | 45.0% | |
| TGGTTTAGATTCCTCAGTCC+AGG | + | tig0007630:7876-7895 | None:intergenic | 45.0% | |
| ATGTTTACCAGCGGAAAGAC+GGG | + | tig0007630:8177-8196 | None:intergenic | 45.0% | |
| GGTTGAAATGCAAGGCTGTA+AGG | + | tig0007630:8394-8413 | None:intergenic | 45.0% | |
| ! | CTGCTGTTGGTTGAAATGCA+AGG | + | tig0007630:8402-8421 | None:intergenic | 45.0% |
| CTTGCATTTCAACCAACAGC+AGG | - | tig0007630:8400-8419 | Msa1345800:intron | 45.0% | |
| TTTCAACCAACAGCAGGGTT+AGG | - | tig0007630:8406-8425 | Msa1345800:intron | 45.0% | |
| TTCAACCAACAGCAGGGTTA+GGG | - | tig0007630:8407-8426 | Msa1345800:intron | 45.0% | |
| TAGTCCTAGGAAAGGGACTA+AGG | + | tig0007630:8763-8782 | None:intergenic | 45.0% | |
| TACCGTGATCCATACCCATT+TGG | - | tig0007630:9066-9085 | Msa1345800:intron | 45.0% | |
| CACCAAATGGGTATGGATCA+CGG | + | tig0007630:9071-9090 | None:intergenic | 45.0% | |
| ! | TGATCCATACCCATTTGGTG+TGG | - | tig0007630:9071-9090 | Msa1345800:intron | 45.0% |
| AGCTAGGATCCACACCAAAT+GGG | + | tig0007630:9083-9102 | None:intergenic | 45.0% | |
| ! | GATGTCCATTCTGTTTGGTG+TGG | - | tig0007630:9152-9171 | Msa1345800:intron | 45.0% |
| ATGTGCCACACCAAACAGAA+TGG | + | tig0007630:9160-9179 | None:intergenic | 45.0% | |
| TGGTGTGGCACATATGAACT+TGG | - | tig0007630:9167-9186 | Msa1345800:intron | 45.0% | |
| GGTGTGGCACATATGAACTT+GGG | - | tig0007630:9168-9187 | Msa1345800:intron | 45.0% | |
| ! | TCGTTTCTTTGGAAGCTCAC+TGG | - | tig0007630:9215-9234 | Msa1345800:intron | 45.0% |
| CTTACTCTAATGTTGCTCCC+AGG | - | tig0007630:9312-9331 | Msa1345800:CDS | 45.0% | |
| TGTGGCACAAATTGGTACCT+GGG | + | tig0007630:9332-9351 | None:intergenic | 45.0% | |
| TTAAGCCCTACAGACGAACT+TGG | - | tig0007630:9458-9477 | Msa1345800:five_prime_UTR | 45.0% | |
| TCTCACCAAGTTCGTCTGTA+GGG | + | tig0007630:9466-9485 | None:intergenic | 45.0% | |
| TTCTCACCAAGTTCGTCTGT+AGG | + | tig0007630:9467-9486 | None:intergenic | 45.0% | |
| GGTGAGAATCAGTTGTTCTG+GGG | - | tig0007630:9479-9498 | Msa1345800:five_prime_UTR | 45.0% | |
| GACCACTTCAAGTATGAGTC+TGG | - | tig0007630:9507-9526 | Msa1345800:five_prime_UTR | 45.0% | |
| !! | TGATGCTTATGGTGACGGTG+CGG | + | tig0007630:108-127 | None:intergenic | 50.0% |
| ! | CCATTTTCTCGACGTTTCCC+GGG | - | tig0007630:327-346 | Msa1345800:CDS | 50.0% |
| TCGGATCGCATCAGATCCAT+CGG | + | tig0007630:383-402 | None:intergenic | 50.0% | |
| ATAGGAAACGGCACGATGAG+CGG | + | tig0007630:444-463 | None:intergenic | 50.0% | |
| !! | ATATGTAGCACCGGCACTTC+TGG | - | tig0007630:597-616 | Msa1345800:CDS | 50.0% |
| AGAGTGACTGATCTGGGTGT+TGG | - | tig0007630:873-892 | Msa1345800:intron | 50.0% | |
| GACCATCTTCATCAGGCATG+TGG | - | tig0007630:1220-1239 | Msa1345800:intron | 50.0% | |
| GGCATGTGGTATCATGCTAG+AGG | - | tig0007630:1234-1253 | Msa1345800:intron | 50.0% | |
| TTGGAGTGGTAGTTGAGTCC+AGG | - | tig0007630:1552-1571 | Msa1345800:intron | 50.0% | |
| GGTAGTTGAGTCCAGGATCT+AGG | - | tig0007630:1559-1578 | Msa1345800:intron | 50.0% | |
| GGATGCTGTACGGAAAATGG+TGG | - | tig0007630:2144-2163 | Msa1345800:CDS | 50.0% | |
| ! | GGCTAGCCAAAGAAATAGGG+AGG | + | tig0007630:2564-2583 | None:intergenic | 50.0% |
| GGAAACAGAGTCATGAGCAC+TGG | + | tig0007630:2684-2703 | None:intergenic | 50.0% | |
| AGTTCCCATGAGGGGAAGTT+TGG | - | tig0007630:3040-3059 | Msa1345800:intron | 50.0% | |
| TCCTCCAAACTTCCCCTCAT+GGG | + | tig0007630:3047-3066 | None:intergenic | 50.0% | |
| ATCCTCCAAACTTCCCCTCA+TGG | + | tig0007630:3048-3067 | None:intergenic | 50.0% | |
| TTGCAGTAGGGTACGAGAAG+AGG | + | tig0007630:3425-3444 | None:intergenic | 50.0% | |
| TTCTCGTACCCTACTGCAAC+CGG | - | tig0007630:3426-3445 | Msa1345800:intron | 50.0% | |
| GTCAATGTCCGGTTGCAGTA+GGG | + | tig0007630:3437-3456 | None:intergenic | 50.0% | |
| AGTCAATGTCCGGTTGCAGT+AGG | + | tig0007630:3438-3457 | None:intergenic | 50.0% | |
| ! | ACTGCAACCGGACATTGACT+TGG | - | tig0007630:3438-3457 | Msa1345800:intron | 50.0% |
| GTGGGTAAATTTCAGGCGTG+TGG | - | tig0007630:4105-4124 | Msa1345800:intron | 50.0% | |
| CTATCTCGCCTGAAACAGCA+CGG | + | tig0007630:4152-4171 | None:intergenic | 50.0% | |
| ACCAGCTGGAGAGCAAATCA+TGG | - | tig0007630:4488-4507 | Msa1345800:CDS | 50.0% | |
| !! | TCCATGATTTGCTCTCCAGC+TGG | + | tig0007630:4492-4511 | None:intergenic | 50.0% |
| GGATCCTGTTACAACCGAGA+TGG | - | tig0007630:4509-4528 | Msa1345800:intron | 50.0% | |
| GTGTAGACAGGGTACAGCAT+GGG | + | tig0007630:4643-4662 | None:intergenic | 50.0% | |
| TGTGTAGACAGGGTACAGCA+TGG | + | tig0007630:4644-4663 | None:intergenic | 50.0% | |
| GAGGTAAGTGAGCTCAGCTT+TGG | - | tig0007630:4830-4849 | Msa1345800:intron | 50.0% | |
| CAACTTTGGATGCTGGGATC+AGG | - | tig0007630:5282-5301 | Msa1345800:CDS | 50.0% | |
| !! | TGGAAGAAAGCGCCTTGTTC+CGG | + | tig0007630:5310-5329 | None:intergenic | 50.0% |
| TTACCTAGGACAAGGCGACA+AGG | + | tig0007630:5498-5517 | None:intergenic | 50.0% | |
| AATGTCTCGTTGGAGAGGGA+TGG | - | tig0007630:5575-5594 | Msa1345800:CDS | 50.0% | |
| GTGGGAGAGTTGTCTCTGTT+AGG | - | tig0007630:6330-6349 | Msa1345800:CDS | 50.0% | |
| GTTGTCTCTGTTAGGACCCA+AGG | - | tig0007630:6338-6357 | Msa1345800:CDS | 50.0% | |
| TACTGTGAAGGGGAAACCCT+TGG | + | tig0007630:6507-6526 | None:intergenic | 50.0% | |
| GCTATGATGTTTGGGGACTG+GGG | - | tig0007630:7014-7033 | Msa1345800:intron | 50.0% | |
| TCACGACATCGAAATGCCGA+TGG | + | tig0007630:7620-7639 | None:intergenic | 50.0% | |
| CTCTCTATATGAACCAGCCC+TGG | - | tig0007630:7855-7874 | Msa1345800:intron | 50.0% | |
| TGACTGCTCTTGTGCCTTTG+TGG | - | tig0007630:8347-8366 | Msa1345800:intron | 50.0% | |
| GACTGCTCTTGTGCCTTTGT+GGG | - | tig0007630:8348-8367 | Msa1345800:intron | 50.0% | |
| GGATCCACACCAAATGGGTA+TGG | + | tig0007630:9078-9097 | None:intergenic | 50.0% | |
| CAGCTAGGATCCACACCAAA+TGG | + | tig0007630:9084-9103 | None:intergenic | 50.0% | |
| !! | CATTTGGTGTGGATCCTAGC+TGG | - | tig0007630:9082-9101 | Msa1345800:intron | 50.0% |
| GCGTGGAAGTCGTTCAGAAT+TGG | - | tig0007630:9104-9123 | Msa1345800:intron | 50.0% | |
| ! | AGGTGTGTCTCTCTTTTGCC+TGG | - | tig0007630:9243-9262 | Msa1345800:intron | 50.0% |
| CAGAAGTAATTGCACAGGCC+AGG | + | tig0007630:9264-9283 | None:intergenic | 50.0% | |
| CTGTGGCACAAATTGGTACC+TGG | + | tig0007630:9333-9352 | None:intergenic | 50.0% | |
| !! | GGCTTTGGAAAGAGCATCCA+TGG | + | tig0007630:9649-9668 | None:intergenic | 50.0% |
| CCCGGGAAACGTCGAGAAAA+TGG | + | tig0007630:330-349 | None:intergenic | 55.0% | |
| CTCGACGTTTCCCGGGAAAA+TGG | - | tig0007630:334-353 | Msa1345800:CDS | 55.0% | |
| CATCGACAACTTACCGCCGA+TGG | - | tig0007630:364-383 | Msa1345800:CDS | 55.0% | |
| GATCGCATCAGATCCATCGG+CGG | + | tig0007630:380-399 | None:intergenic | 55.0% | |
| ! | AACGGCACGATGAGCGGATT+CGG | + | tig0007630:438-457 | None:intergenic | 55.0% |
| !! | TGAGCACTGGCCGTATAGAG+AGG | + | tig0007630:2671-2690 | None:intergenic | 55.0% |
| TCCCATGAGGGGAAGTTTGG+AGG | - | tig0007630:3043-3062 | Msa1345800:intron | 55.0% | |
| TGGGCAGGTAAAGCGATGTG+CGG | - | tig0007630:3342-3361 | Msa1345800:intron | 55.0% | |
| !! | GCAACCGGACATTGACTTGG+AGG | - | tig0007630:3441-3460 | Msa1345800:intron | 55.0% |
| !! | AGTCATGGCCGTGCTGTTTC+AGG | - | tig0007630:4141-4160 | Msa1345800:intron | 55.0% |
| GCACGGGCAAATAACTAGGG+AGG | - | tig0007630:4811-4830 | Msa1345800:intron | 55.0% | |
| CATCCTTGTCGCCTTGTCCT+AGG | - | tig0007630:5492-5511 | Msa1345800:intron | 55.0% | |
| !! | AGATGCAGGAGGCACTGCAA+CGG | - | tig0007630:5707-5726 | Msa1345800:intron | 55.0% |
| TGTGAAGGGGAAACCCTTGG+AGG | + | tig0007630:6504-6523 | None:intergenic | 55.0% | |
| ATGTTTGGGGACTGGGGTCA+TGG | - | tig0007630:7020-7039 | Msa1345800:intron | 55.0% | |
| CCATGAAGCTTCCCAGCTTC+TGG | + | tig0007630:7490-7509 | None:intergenic | 55.0% | |
| CCAGAAGCTGGGAAGCTTCA+TGG | - | tig0007630:7487-7506 | Msa1345800:intron | 55.0% | |
| TATGAACCAGCCCTGGACTG+AGG | - | tig0007630:7862-7881 | Msa1345800:intron | 55.0% | |
| TAGATTCCTCAGTCCAGGGC+TGG | + | tig0007630:7871-7890 | None:intergenic | 55.0% | |
| TGTTGCCCTAACCCTGCTGT+TGG | + | tig0007630:8415-8434 | None:intergenic | 55.0% | |
| ! | CACGATGAGCGGATTCGGCA+GGG | + | tig0007630:433-452 | None:intergenic | 60.0% |
| TGGATGCTGGGATCAGGCAC+CGG | - | tig0007630:5288-5307 | Msa1345800:CDS | 60.0% | |
| !! | TGGGATCAGGCACCGGAACA+AGG | - | tig0007630:5295-5314 | Msa1345800:CDS | 60.0% |
| GTTGCAGTGCCTCCTGCATC+TGG | + | tig0007630:5708-5727 | None:intergenic | 60.0% | |
| !! | GATGCAGGAGGCACTGCAAC+GGG | - | tig0007630:5708-5727 | Msa1345800:intron | 60.0% |
| GCGGTGGGAACGAGACTGTT+AGG | + | tig0007630:6704-6723 | None:intergenic | 60.0% | |
| ATACGTGCCCGTCTTTCCGC+TGG | - | tig0007630:8167-8186 | Msa1345800:intron | 60.0% | |
| GAACGACTTCCACGCCAGCT+AGG | + | tig0007630:9099-9118 | None:intergenic | 60.0% | |
| ! | GCACGATGAGCGGATTCGGC+AGG | + | tig0007630:434-453 | None:intergenic | 65.0% |
| GGTGTGGATCCTAGCTGGCG+TGG | - | tig0007630:9087-9106 | Msa1345800:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0007630 | gene | 77 | 9696 | 77 | ID=Msa1345800;Name=Msa1345800 |
| tig0007630 | mRNA | 77 | 9696 | 77 | ID=Msa1345800-mRNA-1;Parent=Msa1345800;Name=Msa1345800-mRNA-1;_AED=0.13;_eAED=0.13;_QI=276|0.86|0.75|1|1|1|16|0|670 |
| tig0007630 | exon | 77 | 160 | 77 | ID=Msa1345800-mRNA-1:exon:5206;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 256 | 439 | 256 | ID=Msa1345800-mRNA-1:exon:5205;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 529 | 735 | 529 | ID=Msa1345800-mRNA-1:exon:5204;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 2122 | 2282 | 2122 | ID=Msa1345800-mRNA-1:exon:5203;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 2670 | 2823 | 2670 | ID=Msa1345800-mRNA-1:exon:5202;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 3916 | 4064 | 3916 | ID=Msa1345800-mRNA-1:exon:5201;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 4152 | 4259 | 4152 | ID=Msa1345800-mRNA-1:exon:5200;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 4412 | 4519 | 4412 | ID=Msa1345800-mRNA-1:exon:5199;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 4941 | 5036 | 4941 | ID=Msa1345800-mRNA-1:exon:5198;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 5095 | 5145 | 5095 | ID=Msa1345800-mRNA-1:exon:5197;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 5243 | 5416 | 5243 | ID=Msa1345800-mRNA-1:exon:5196;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 5540 | 5653 | 5540 | ID=Msa1345800-mRNA-1:exon:5195;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 5981 | 6088 | 5981 | ID=Msa1345800-mRNA-1:exon:5194;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 6302 | 6424 | 6302 | ID=Msa1345800-mRNA-1:exon:5193;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 7765 | 7809 | 7765 | ID=Msa1345800-mRNA-1:exon:5192;Parent=Msa1345800-mRNA-1 |
| tig0007630 | exon | 9277 | 9696 | 9277 | ID=Msa1345800-mRNA-1:exon:5191;Parent=Msa1345800-mRNA-1 |
| tig0007630 | five_prime_UTR | 9421 | 9696 | 9421 | ID=Msa1345800-mRNA-1:five_prime_utr;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 9277 | 9420 | 9277 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 7765 | 7809 | 7765 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 6302 | 6424 | 6302 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 5981 | 6088 | 5981 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 5540 | 5653 | 5540 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 5243 | 5416 | 5243 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 5095 | 5145 | 5095 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 4941 | 5036 | 4941 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 4412 | 4519 | 4412 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 4152 | 4259 | 4152 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 3916 | 4064 | 3916 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 2670 | 2823 | 2670 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 2122 | 2282 | 2122 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 529 | 735 | 529 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 256 | 439 | 256 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| tig0007630 | CDS | 77 | 160 | 77 | ID=Msa1345800-mRNA-1:cds;Parent=Msa1345800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
