Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1355530 | RHN76150.1 | 98.663 | 673 | 5 | 3 | 1 | 670 | 77 | 748 | 0.0 | 1349 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1355530 | sp|Q9C5J8|OEP80_ARATH | 68.767 | 730 | 165 | 7 | 3 | 670 | 4 | 732 | 0.0 | 988 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1355530 | A0A396JDA2 | 98.663 | 673 | 5 | 3 | 1 | 670 | 77 | 748 | 0.0 | 1349 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1225570 | Msa1355530 | 0.907768 | 3.543930e-81 | -8.615850e-47 |
Msa0264700 | Msa1355530 | 0.921250 | 4.554205e-88 | -8.615850e-47 |
Msa0302740 | Msa1355530 | 0.951961 | 6.728038e-110 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1355530 | MtrunA17_Chr2g0328911 | 98.663 | 673 | 5 | 3 | 1 | 670 | 77 | 748 | 0.0 | 1349 |
Msa1355530 | MtrunA17_Chr2g0322151 | 38.438 | 320 | 188 | 2 | 353 | 666 | 39 | 355 | 2.57e-68 | 227 |
Msa1355530 | MtrunA17_Chr1g0184291 | 37.025 | 316 | 186 | 3 | 359 | 666 | 46 | 356 | 2.09e-61 | 209 |
Msa1355530 | MtrunA17_Chr4g0031981 | 23.929 | 560 | 367 | 20 | 146 | 655 | 238 | 788 | 1.17e-25 | 112 |
Msa1355530 | MtrunA17_Chr2g0328601 | 24.194 | 496 | 317 | 18 | 208 | 655 | 291 | 775 | 7.51e-25 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1355530 | AT5G19620.1 | 68.767 | 730 | 165 | 7 | 3 | 670 | 4 | 732 | 0.0 | 988 |
Msa1355530 | AT3G44160.1 | 41.486 | 323 | 180 | 2 | 350 | 666 | 36 | 355 | 1.93e-68 | 228 |
Msa1355530 | AT3G48620.1 | 36.170 | 282 | 132 | 4 | 430 | 666 | 36 | 314 | 5.55e-39 | 147 |
Msa1355530 | AT3G46740.1 | 23.630 | 584 | 368 | 22 | 146 | 668 | 252 | 818 | 4.88e-23 | 105 |
Msa1355530 | AT4G09080.2 | 38.938 | 113 | 64 | 2 | 541 | 653 | 282 | 389 | 7.92e-14 | 74.3 |
Msa1355530 | AT4G09080.1 | 39.806 | 103 | 57 | 2 | 551 | 653 | 281 | 378 | 8.04e-14 | 74.3 |
Msa1355530 | AT4G09080.3 | 39.806 | 103 | 57 | 2 | 551 | 653 | 210 | 307 | 9.01e-14 | 73.6 |
Find 243 sgRNAs with CRISPR-Local
Find 705 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCCTACTCGTCTTAATTTA+AGG | 0.146482 | tig0014834:+30695 | Msa1355530:CDS |
TTTCATTCTGACTTCTGATA+TGG | 0.171575 | tig0014834:+23480 | Msa1355530:five_prime_UTR |
GACTCAGAGCACGGCGGGTC+TGG | 0.205751 | tig0014834:-23406 | None:intergenic |
CTAAGGAAACATTGAGCTTC+TGG | 0.240740 | tig0014834:-28719 | None:intergenic |
TGGTATTCGATTGGTGTTTC+AGG | 0.243430 | tig0014834:+24199 | Msa1355530:CDS |
AATAAGCCTGGAAGTGGATA+TGG | 0.247524 | tig0014834:+31884 | Msa1355530:CDS |
TTCCATTAATGATTGGTATA+TGG | 0.249384 | tig0014834:+24808 | Msa1355530:CDS |
AGACAAAACCGGGTTTAATA+TGG | 0.259473 | tig0014834:-23522 | None:intergenic |
ATTTGCCGAAGTATTGTTTC+AGG | 0.261778 | tig0014834:-25408 | None:intergenic |
CTACACAGACCCTTGGATTC+AGG | 0.261830 | tig0014834:+28776 | Msa1355530:CDS |
CTCCATATACCAATCATTAA+TGG | 0.263048 | tig0014834:-24810 | None:intergenic |
CATCCGTGTGGATTCGCCTT+TGG | 0.268931 | tig0014834:+31919 | Msa1355530:CDS |
GGAAGATGGGGCATCAAAAT+AGG | 0.273664 | tig0014834:+32267 | Msa1355530:three_prime_UTR |
ATCCGTGTGGATTCGCCTTT+GGG | 0.278696 | tig0014834:+31920 | Msa1355530:CDS |
GTGCTGGGTTTGGGTTTAGA+AGG | 0.279776 | tig0014834:-23750 | None:intergenic |
CGATCATATGTTGTTGGTTC+TGG | 0.289558 | tig0014834:+30965 | Msa1355530:CDS |
CGAACAGTTAACGCCGAATT+AGG | 0.292329 | tig0014834:-24095 | None:intergenic |
GTATAAATTACCTGCTGGTT+GGG | 0.304701 | tig0014834:-25877 | None:intergenic |
TCTGACTATGGAACTGATCT+TGG | 0.318574 | tig0014834:+31249 | Msa1355530:CDS |
TTTCCATACGATTTCTTGAT+AGG | 0.323891 | tig0014834:+25228 | Msa1355530:CDS |
GGCTTATTTCTTGCTCCAGC+AGG | 0.332484 | tig0014834:-31869 | None:intergenic |
GAATGGTGAAGTGCTGGGTT+TGG | 0.337140 | tig0014834:-23760 | None:intergenic |
ACTCAGAGCACGGCGGGTCT+GGG | 0.337701 | tig0014834:-23405 | None:intergenic |
AGGGGAATTGTGTGTCGTTT+TGG | 0.348502 | tig0014834:-23668 | None:intergenic |
AGTGGATATGGGTATGGTTT+GGG | 0.348802 | tig0014834:+31896 | Msa1355530:CDS |
AATGGTGAAGTGCTGGGTTT+GGG | 0.349626 | tig0014834:-23759 | None:intergenic |
AATCCTTGGAACTCTTGATT+TGG | 0.352704 | tig0014834:-24563 | None:intergenic |
TTTAAGCGCCTGAGCGGCTT+CGG | 0.357558 | tig0014834:-24063 | None:intergenic |
CTGATTGGTTATCCTTCACT+AGG | 0.361268 | tig0014834:+30638 | Msa1355530:CDS |
ACCAATGGCAAAAGCTTCAT+AGG | 0.368303 | tig0014834:-30894 | None:intergenic |
TAAAGCTTGTAGACCTAATT+CGG | 0.369889 | tig0014834:+24082 | Msa1355530:CDS |
CGATTTCTTCCATTAATGAT+TGG | 0.369951 | tig0014834:+24801 | Msa1355530:CDS |
GTCAACCTGGCCCCTCTCTA+AGG | 0.370109 | tig0014834:-28736 | None:intergenic |
ACAATGGTGTTCCTATCATT+AGG | 0.370467 | tig0014834:+30297 | Msa1355530:CDS |
GCCGTGCTCTGAGTCATTTC+CGG | 0.372578 | tig0014834:+23414 | Msa1355530:five_prime_UTR |
AAAGTGACGGCGATCGGTTT+GGG | 0.373802 | tig0014834:-23926 | None:intergenic |
TTCATTCTGACTTCTGATAT+GGG | 0.374346 | tig0014834:+23481 | Msa1355530:five_prime_UTR |
TCAGCTGTAGAGATTCTCTC+TGG | 0.378668 | tig0014834:+25161 | Msa1355530:CDS |
GAGACTGTTTACACTGGTTC+CGG | 0.385515 | tig0014834:+30485 | Msa1355530:CDS |
CGGTGAACATGGGTCTTCTA+TGG | 0.385999 | tig0014834:+30505 | Msa1355530:CDS |
GATTACAACCTTGCAGTAAG+AGG | 0.386187 | tig0014834:-30335 | None:intergenic |
CCATACCCATATCCACTTCC+AGG | 0.386375 | tig0014834:-31890 | None:intergenic |
TGAAGGAGCTAATGTTATTC+CGG | 0.392839 | tig0014834:+24592 | Msa1355530:CDS |
GTTCATCGGATTATTAATAG+TGG | 0.401047 | tig0014834:+24134 | Msa1355530:CDS |
ATCTGGAACAATAATGATTC+AGG | 0.405829 | tig0014834:+28815 | Msa1355530:CDS |
GTTACCATGAACAATTGTTC+CGG | 0.407126 | tig0014834:-28940 | None:intergenic |
CTGTGATGCGGCCAATGGTC+AGG | 0.410852 | tig0014834:-28980 | None:intergenic |
GTTAGTGAAGTGAGAATGTA+AGG | 0.413667 | tig0014834:-23787 | None:intergenic |
TTGGCAGTGTCAGACAAAAC+CGG | 0.417389 | tig0014834:-23533 | None:intergenic |
CAATGGTGTTCCTATCATTA+GGG | 0.420272 | tig0014834:+30298 | Msa1355530:CDS |
GGAGATGATAAGCGAACATC+TGG | 0.426743 | tig0014834:+28798 | Msa1355530:CDS |
GAAAGTGACGGCGATCGGTT+TGG | 0.426928 | tig0014834:-23927 | None:intergenic |
TGGTAAACTGCCAGTCTCTC+TGG | 0.427566 | tig0014834:+30845 | Msa1355530:intron |
TTGTAACGATCCCTAATGAT+AGG | 0.431689 | tig0014834:-30308 | None:intergenic |
CTCCTTCACATACCAATCCT+TGG | 0.436010 | tig0014834:-24577 | None:intergenic |
TGTATTAACGATGGGGATCA+TGG | 0.437727 | tig0014834:+25836 | Msa1355530:CDS |
CCACTCCACTTTGGCCTGAT+CGG | 0.441134 | tig0014834:-29023 | None:intergenic |
TTACCATGAACAATTGTTCC+GGG | 0.442645 | tig0014834:-28939 | None:intergenic |
AAGAGGTTTCACTTTGGAGT+TGG | 0.442822 | tig0014834:+31983 | Msa1355530:CDS |
GAAGAAGGCGGTGTGGGCTC+TGG | 0.444957 | tig0014834:+30941 | Msa1355530:CDS |
TACACTGGTTCCGGTGAACA+TGG | 0.445119 | tig0014834:+30494 | Msa1355530:CDS |
TCTGGTCGATCATATGTTGT+TGG | 0.445413 | tig0014834:+30959 | Msa1355530:CDS |
TAGGGTTCTGACTTCTAAGT+AGG | 0.447668 | tig0014834:+32286 | Msa1355530:three_prime_UTR |
CTGACCATTGGCCGCATCAC+AGG | 0.448499 | tig0014834:+28981 | Msa1355530:CDS |
TCGTTAACCGCTCGTGCGTT+TGG | 0.452144 | tig0014834:-23552 | None:intergenic |
TACACAGACCCTTGGATTCA+GGG | 0.455851 | tig0014834:+28777 | Msa1355530:CDS |
TCTAGAAGCCGAAGCCGCTC+AGG | 0.457166 | tig0014834:+24055 | Msa1355530:CDS |
TACAGGATATGCAAGGTTAG+TGG | 0.460039 | tig0014834:+32197 | Msa1355530:intron |
GAAGATGGGGCATCAAAATA+GGG | 0.462085 | tig0014834:+32268 | Msa1355530:three_prime_UTR |
GGTGAATGCAAGGGCTAGGA+AGG | 0.463452 | tig0014834:+30660 | Msa1355530:CDS |
CTCAGAGCACGGCGGGTCTG+GGG | 0.467995 | tig0014834:-23404 | None:intergenic |
AAACCGGGTTTAATATGGGC+TGG | 0.469375 | tig0014834:-23517 | None:intergenic |
AACCGGGTTTAATATGGGCT+GGG | 0.473984 | tig0014834:-23516 | None:intergenic |
TTGTCACGGTTCCCAACAAA+GGG | 0.476550 | tig0014834:+23331 | Msa1355530:five_prime_UTR |
TGCTGGGTTTGGGTTTAGAA+GGG | 0.477234 | tig0014834:-23749 | None:intergenic |
TACCAAGCAACGTATCATCA+TGG | 0.481385 | tig0014834:-30457 | None:intergenic |
TTGTTCGTGTGTTCCGGTTG+CGG | 0.483641 | tig0014834:+24163 | Msa1355530:CDS |
CGATCGGTTTGGGGCGGTGA+GGG | 0.483784 | tig0014834:-23916 | None:intergenic |
ACGCCCGGAACAATTGTTCA+TGG | 0.484844 | tig0014834:+28936 | Msa1355530:CDS |
CCTGCTGTTCCACTCCACTT+TGG | 0.486020 | tig0014834:-29032 | None:intergenic |
GGTCCACTCAGAGGTCTCAT+TGG | 0.487903 | tig0014834:+27124 | Msa1355530:CDS |
AAGTGGATATGGGTATGGTT+TGG | 0.487913 | tig0014834:+31895 | Msa1355530:CDS |
GAAGTCCTTGTTCCATGTTA+AGG | 0.490848 | tig0014834:-30606 | None:intergenic |
AAAGAGAAGAGGTTTCACTT+TGG | 0.492389 | tig0014834:+31977 | Msa1355530:CDS |
TAGAATTGAGTCGACCGATC+AGG | 0.494717 | tig0014834:+29009 | Msa1355530:CDS |
TGGAGAAATCTCTTTCCCTA+TGG | 0.496024 | tig0014834:+30985 | Msa1355530:CDS |
AGCATTATTCCCCAACCAGC+AGG | 0.496853 | tig0014834:+25867 | Msa1355530:CDS |
TATGGAACTGATCTTGGATC+AGG | 0.496920 | tig0014834:+31255 | Msa1355530:CDS |
GGCTATGAAGAAGGCGGTGT+GGG | 0.499428 | tig0014834:+30935 | Msa1355530:CDS |
CTTCCTATCAAGAAATCGTA+TGG | 0.500556 | tig0014834:-25231 | None:intergenic |
GCCGTCACTTTCGTCGGCGG+AGG | 0.500737 | tig0014834:+23938 | Msa1355530:CDS |
GCTAGGAAGGGTGTTGAGAT+AGG | 0.500852 | tig0014834:+30673 | Msa1355530:CDS |
GACAAAACCGGGTTTAATAT+GGG | 0.502200 | tig0014834:-23521 | None:intergenic |
AAATCAAGAGTTCCAAGGAT+TGG | 0.503304 | tig0014834:+24565 | Msa1355530:CDS |
TCACGCGTATCAACCGCAAC+CGG | 0.503937 | tig0014834:-24176 | None:intergenic |
GTTGAAAACGCGACAGAATG+AGG | 0.504027 | tig0014834:+23968 | Msa1355530:CDS |
AGTTATCAACTTGAGGCGAT+TGG | 0.504959 | tig0014834:+24772 | Msa1355530:CDS |
CAGCTGTAGAGATTCTCTCT+GGG | 0.505508 | tig0014834:+25162 | Msa1355530:CDS |
GGATCAGGCTCGACTGTCCC+TGG | 0.507315 | tig0014834:+31270 | Msa1355530:CDS |
GATAACCAATCAGGCAAAAG+AGG | 0.509392 | tig0014834:-30628 | None:intergenic |
GGATCATTTGAAGAGGAAGA+TGG | 0.511888 | tig0014834:+32253 | Msa1355530:three_prime_UTR |
TCAGAGCACGGCGGGTCTGG+GGG | 0.511985 | tig0014834:-23403 | None:intergenic |
GAAAATATGACACATTCTAC+TGG | 0.516204 | tig0014834:-31228 | None:intergenic |
TAAGCTTGTGCTGTGGTGGC+CGG | 0.517280 | tig0014834:-23433 | None:intergenic |
CTAGGGTGAATGCAAGGGCT+AGG | 0.517439 | tig0014834:+30656 | Msa1355530:CDS |
CGGCAAATTACAACCAAGAA+GGG | 0.517856 | tig0014834:+25423 | Msa1355530:CDS |
TATGCAAGGTTAGTGGAGAA+TGG | 0.522300 | tig0014834:+32204 | Msa1355530:three_prime_UTR |
GCAAGAAATAAGCCTGGAAG+TGG | 0.522377 | tig0014834:+31878 | Msa1355530:CDS |
TTATCATCTCCCTGAATCCA+AGG | 0.525965 | tig0014834:-28786 | None:intergenic |
GCTTATTTCTTGCTCCAGCA+GGG | 0.526681 | tig0014834:-31868 | None:intergenic |
GTAGAAACTGTATTAACGAT+GGG | 0.527195 | tig0014834:+25828 | Msa1355530:CDS |
ATAAGCCTGGAAGTGGATAT+GGG | 0.527247 | tig0014834:+31885 | Msa1355530:CDS |
GTGCAAACTACACAGACCCT+TGG | 0.528418 | tig0014834:+28769 | Msa1355530:CDS |
ACCATTGTTGTCACAGACTC+CGG | 0.529156 | tig0014834:-30282 | None:intergenic |
CTAGTGAAGGATAACCAATC+AGG | 0.529177 | tig0014834:-30637 | None:intergenic |
CATAGAAGACCCATGTTCAC+CGG | 0.529967 | tig0014834:-30504 | None:intergenic |
CACACTATTTGTTCCACCAA+TGG | 0.530556 | tig0014834:-30909 | None:intergenic |
CCTTCACTAGGGTGAATGCA+AGG | 0.532505 | tig0014834:+30650 | Msa1355530:CDS |
TGTATAAATTACCTGCTGGT+TGG | 0.535935 | tig0014834:-25878 | None:intergenic |
GATCATTTGAAGAGGAAGAT+GGG | 0.537722 | tig0014834:+32254 | Msa1355530:three_prime_UTR |
CCAAAGTGGAGTGGAACAGC+AGG | 0.538586 | tig0014834:+29032 | Msa1355530:CDS |
ATTACAAGTTTCAGAGGCCG+AGG | 0.540416 | tig0014834:+25196 | Msa1355530:CDS |
AGCTCAATGTTTCCTTAGAG+AGG | 0.540759 | tig0014834:+28724 | Msa1355530:CDS |
GCTGGAGCAAGAAATAAGCC+TGG | 0.541650 | tig0014834:+31872 | Msa1355530:CDS |
CCTGGAAGTGGATATGGGTA+TGG | 0.542592 | tig0014834:+31890 | Msa1355530:CDS |
TATCTATCACTTCAGCGTGC+CGG | 0.544279 | tig0014834:+30263 | Msa1355530:intron |
TGGCAGTGTCAGACAAAACC+GGG | 0.547075 | tig0014834:-23532 | None:intergenic |
GTTTGGGTTTAGAAGGGAGA+GGG | 0.547907 | tig0014834:-23743 | None:intergenic |
TCGGCAAATTACAACCAAGA+AGG | 0.548546 | tig0014834:+25422 | Msa1355530:CDS |
CTGAGTGGAGTGAGTTGTGA+AGG | 0.548803 | tig0014834:-23841 | None:intergenic |
TGATTGATGAAGAAATGAAA+CGG | 0.549371 | tig0014834:-23716 | None:intergenic |
TCAGGCTACTGTTACCATCC+AGG | 0.553099 | tig0014834:-28962 | None:intergenic |
TATAAATTACCTGCTGGTTG+GGG | 0.553330 | tig0014834:-25876 | None:intergenic |
CCGACGAAAGTGACGGCGAT+CGG | 0.554142 | tig0014834:-23932 | None:intergenic |
ATTACAACCTTGCAGTAAGA+GGG | 0.554557 | tig0014834:-30334 | None:intergenic |
GCTCAATGTTTCCTTAGAGA+GGG | 0.554671 | tig0014834:+28725 | Msa1355530:CDS |
ACCAAGCAACGTATCATCAT+GGG | 0.557456 | tig0014834:-30456 | None:intergenic |
AACAATTGTTCATGGTAACC+TGG | 0.557498 | tig0014834:+28944 | Msa1355530:CDS |
TGTAGGGGTGAGACCACTGT+TGG | 0.558673 | tig0014834:+25375 | Msa1355530:intron |
ATATCAGAAGTCAGAATGAA+AGG | 0.560314 | tig0014834:-23478 | None:intergenic |
CAGGTCTACAGCATGCATCA+AGG | 0.566932 | tig0014834:+25795 | Msa1355530:intron |
GTAGGGGTGAGACCACTGTT+GGG | 0.568446 | tig0014834:+25376 | Msa1355530:intron |
AGGGTTCTGACTTCTAAGTA+GGG | 0.568850 | tig0014834:+32287 | Msa1355530:three_prime_UTR |
CTTGTCACGGTTCCCAACAA+AGG | 0.569417 | tig0014834:+23330 | Msa1355530:five_prime_UTR |
CACTCAGAGGTCTCATTGGA+AGG | 0.571099 | tig0014834:+27128 | Msa1355530:CDS |
CGGTGAGGAACTTGAACGGA+AGG | 0.571507 | tig0014834:+24031 | Msa1355530:CDS |
ACCATTGGCCGCATCACAGG+TGG | 0.572028 | tig0014834:+28984 | Msa1355530:CDS |
GCGATCGGTTTGGGGCGGTG+AGG | 0.573504 | tig0014834:-23917 | None:intergenic |
TCTGAGATTACAAGTTTCAG+AGG | 0.575092 | tig0014834:+25190 | Msa1355530:CDS |
CACGAACGATTAAGTCAACC+TGG | 0.575242 | tig0014834:-28749 | None:intergenic |
ACCACCTGTGATGCGGCCAA+TGG | 0.575963 | tig0014834:-28985 | None:intergenic |
AGTGATTGTGTTGTGTTGCA+CGG | 0.576545 | tig0014834:-23591 | None:intergenic |
TGTTTCCTTAGAGAGGGGCC+AGG | 0.576734 | tig0014834:+28731 | Msa1355530:CDS |
TTCCAAGGATTGGTATGTGA+AGG | 0.580329 | tig0014834:+24575 | Msa1355530:CDS |
GGTTTGGGTTTAGAAGGGAG+AGG | 0.581323 | tig0014834:-23744 | None:intergenic |
AGCCCAGCCCATATTAAACC+CGG | 0.581676 | tig0014834:+23514 | Msa1355530:five_prime_UTR |
GAAATGACTCAGAGCACGGC+GGG | 0.582191 | tig0014834:-23411 | None:intergenic |
TTAATGACAAGAAAGAGAAG+AGG | 0.583767 | tig0014834:+31966 | Msa1355530:CDS |
TTTGCAGTTTGTCCTTAACA+TGG | 0.585159 | tig0014834:+30594 | Msa1355530:intron |
GGTAACAGTAGCCTGACCAT+TGG | 0.586911 | tig0014834:+28969 | Msa1355530:CDS |
CAGTCTCTCTGGTGGTCATG+TGG | 0.586921 | tig0014834:+30856 | Msa1355530:intron |
GCCCATGATGATACGTTGCT+TGG | 0.588729 | tig0014834:+30455 | Msa1355530:CDS |
AATTACAACCAAGAAGGGGC+AGG | 0.589302 | tig0014834:+25428 | Msa1355530:CDS |
CTCTCTGGTGGTCATGTGGT+AGG | 0.589324 | tig0014834:+30860 | Msa1355530:CDS |
GCTGGTGGTGGGATATCAAG+TGG | 0.589819 | tig0014834:+26770 | Msa1355530:CDS |
AGTGTGAGAGGCTATGAAGA+AGG | 0.592683 | tig0014834:+30926 | Msa1355530:CDS |
AAGTGACGGCGATCGGTTTG+GGG | 0.596098 | tig0014834:-23925 | None:intergenic |
ATTGTTCATGGTAACCTGGA+TGG | 0.596798 | tig0014834:+28948 | Msa1355530:CDS |
GAGTTGGATACAGAAACTAA+AGG | 0.596937 | tig0014834:+31999 | Msa1355530:CDS |
TTCGGCGTTAACTGTTCGTG+AGG | 0.597531 | tig0014834:+24100 | Msa1355530:CDS |
GTGAATGCAAGGGCTAGGAA+GGG | 0.598734 | tig0014834:+30661 | Msa1355530:CDS |
TTTGTTGTGTTATAGATACA+GGG | 0.600022 | tig0014834:+26696 | Msa1355530:intron |
ACACTGGTTCCGGTGAACAT+GGG | 0.600243 | tig0014834:+30495 | Msa1355530:CDS |
CCGATCGCCGTCACTTTCGT+CGG | 0.600370 | tig0014834:+23932 | Msa1355530:CDS |
CCAGCAGAAAATCCTCCACT+AGG | 0.601590 | tig0014834:-26752 | None:intergenic |
TATGGAAATATTATTGACCT+CGG | 0.601755 | tig0014834:-25213 | None:intergenic |
TGTAGAAACTGTATTAACGA+TGG | 0.601822 | tig0014834:+25827 | Msa1355530:CDS |
TTGTGTTATAGATACAGGGA+AGG | 0.602375 | tig0014834:+26700 | Msa1355530:intron |
CTTCACTAGGGTGAATGCAA+GGG | 0.603193 | tig0014834:+30651 | Msa1355530:CDS |
TGATTGGTTATCCTTCACTA+GGG | 0.603200 | tig0014834:+30639 | Msa1355530:CDS |
CCAATGGCAAAAGCTTCATA+GGG | 0.603793 | tig0014834:-30893 | None:intergenic |
CAGGGAAAGTTATCAACTTG+AGG | 0.604810 | tig0014834:+24765 | Msa1355530:intron |
AGGTGCAAGATGATGTTCAT+CGG | 0.605551 | tig0014834:+24120 | Msa1355530:CDS |
AAAATTGAGACTGTTTACAC+TGG | 0.605661 | tig0014834:+30479 | Msa1355530:CDS |
CCGATCAGGCCAAAGTGGAG+TGG | 0.607401 | tig0014834:+29023 | Msa1355530:CDS |
GATAATTTACAGGATATGCA+AGG | 0.607507 | tig0014834:+32190 | Msa1355530:intron |
TACTATAGGATCATTTGAAG+AGG | 0.607573 | tig0014834:+32246 | Msa1355530:three_prime_UTR |
ATCGCCGTCACTTTCGTCGG+CGG | 0.609103 | tig0014834:+23935 | Msa1355530:CDS |
GGAGTAAGCTTGTGCTGTGG+TGG | 0.611140 | tig0014834:-23437 | None:intergenic |
GCCGGAAATGACTCAGAGCA+CGG | 0.611798 | tig0014834:-23415 | None:intergenic |
GACCCAAAGGCGAATCCACA+CGG | 0.611881 | tig0014834:-31922 | None:intergenic |
TACGCGTGATGGTATTCGAT+TGG | 0.612486 | tig0014834:+24190 | Msa1355530:CDS |
CAAAACCTGAAACAATACTT+CGG | 0.613241 | tig0014834:+25403 | Msa1355530:CDS |
GAACCAAATCAAGAGTTCCA+AGG | 0.615888 | tig0014834:+24560 | Msa1355530:CDS |
CTCAATGTTTCCTTAGAGAG+GGG | 0.616330 | tig0014834:+28726 | Msa1355530:CDS |
GGTGGAACAAATAGTGTGAG+AGG | 0.616581 | tig0014834:+30914 | Msa1355530:CDS |
ACAACAGCCCTCTTACTGCA+AGG | 0.618898 | tig0014834:+30327 | Msa1355530:CDS |
AAAGCATATTCAAGACGCAA+AGG | 0.622090 | tig0014834:-31944 | None:intergenic |
CAAACAAACACTACTTGTCA+CGG | 0.625104 | tig0014834:+23317 | None:intergenic |
TATATCTGCAGGATTACAAG+TGG | 0.626414 | tig0014834:+27103 | Msa1355530:intron |
ATCATTTGAAGAGGAAGATG+GGG | 0.626789 | tig0014834:+32255 | Msa1355530:three_prime_UTR |
GTCGACCGATCAGGCCAAAG+TGG | 0.627173 | tig0014834:+29018 | Msa1355530:CDS |
TCCTCCGCCGACGAAAGTGA+CGG | 0.630092 | tig0014834:-23939 | None:intergenic |
CCTTGCATTCACCCTAGTGA+AGG | 0.632071 | tig0014834:-30650 | None:intergenic |
TACCTTAAATTAAGACGAGT+AGG | 0.634846 | tig0014834:-30697 | None:intergenic |
GGTTGATTTAGTGATGAATG+TGG | 0.635208 | tig0014834:+26721 | Msa1355530:CDS |
GTTGCGGTTGATACGCGTGA+TGG | 0.635438 | tig0014834:+24179 | Msa1355530:CDS |
TCAAGACGCAAAGGACCCAA+AGG | 0.635469 | tig0014834:-31935 | None:intergenic |
TATCATCTCCCTGAATCCAA+GGG | 0.640790 | tig0014834:-28785 | None:intergenic |
AGGCTATGAAGAAGGCGGTG+TGG | 0.643174 | tig0014834:+30934 | Msa1355530:CDS |
CTGGTGGTGGGATATCAAGT+GGG | 0.643703 | tig0014834:+26771 | Msa1355530:CDS |
ATTCTACACCACCTGTGATG+CGG | 0.645744 | tig0014834:-28992 | None:intergenic |
TAAACTGCCAGTCTCTCTGG+TGG | 0.648318 | tig0014834:+30848 | Msa1355530:intron |
GTATGGTTTGGGCATCCGTG+TGG | 0.651678 | tig0014834:+31907 | Msa1355530:CDS |
GACACTGCCAAACGCACGAG+CGG | 0.652718 | tig0014834:+23545 | Msa1355530:five_prime_UTR |
GTGGTGGAACGTCCTAGTGG+AGG | 0.653382 | tig0014834:+26740 | Msa1355530:CDS |
TTTGTCCTTAACATGGAACA+AGG | 0.659377 | tig0014834:+30601 | Msa1355530:CDS |
GATGCTGTGGAATTTGAATG+TGG | 0.659671 | tig0014834:-23644 | None:intergenic |
AGCTGTAGAGATTCTCTCTG+GGG | 0.661672 | tig0014834:+25163 | Msa1355530:CDS |
TGATTTAGTGATGAATGTGG+TGG | 0.662411 | tig0014834:+26724 | Msa1355530:CDS |
AATGATTGGTATATGGAGCG+TGG | 0.662922 | tig0014834:+24815 | Msa1355530:CDS |
TGACGGCGATCGGTTTGGGG+CGG | 0.666219 | tig0014834:-23922 | None:intergenic |
ATTACAAGTGGTCCACTCAG+AGG | 0.670930 | tig0014834:+27115 | Msa1355530:CDS |
AGCACAAGCTTACTCCGCCG+TGG | 0.672197 | tig0014834:+23444 | Msa1355530:five_prime_UTR |
GGCAAATTACAACCAAGAAG+GGG | 0.673846 | tig0014834:+25424 | Msa1355530:CDS |
GGTGAGAAATAAAGACGGTG+AGG | 0.676873 | tig0014834:+24016 | Msa1355530:CDS |
AAGACGGTGAGGAACTTGAA+CGG | 0.689733 | tig0014834:+24027 | Msa1355530:CDS |
TAGAAACTGTATTAACGATG+GGG | 0.689786 | tig0014834:+25829 | Msa1355530:CDS |
AATGTGGTGGAACGTCCTAG+TGG | 0.690013 | tig0014834:+26737 | Msa1355530:CDS |
GTGAGAGGCTATGAAGAAGG+CGG | 0.695715 | tig0014834:+30929 | Msa1355530:CDS |
GTATTGGTGAGAAATAAAGA+CGG | 0.695758 | tig0014834:+24011 | Msa1355530:CDS |
GGGGTGAAAAGAAAGAAACA+AGG | 0.695852 | tig0014834:+23351 | Msa1355530:five_prime_UTR |
GCTGTAGAGATTCTCTCTGG+GGG | 0.700021 | tig0014834:+25164 | Msa1355530:CDS |
GGCGGAGTAAGCTTGTGCTG+TGG | 0.705644 | tig0014834:-23440 | None:intergenic |
GGCGGTGAGGGATAACGATG+CGG | 0.706455 | tig0014834:-23904 | None:intergenic |
CTTCCAATGAGACCTCTGAG+TGG | 0.719060 | tig0014834:-27127 | None:intergenic |
GAAAGGAGAAACTCTCACCA+CGG | 0.722657 | tig0014834:-23461 | None:intergenic |
ACAAGCTTTAAGCGCCTGAG+CGG | 0.722785 | tig0014834:-24069 | None:intergenic |
AACGGAACGAGTTAACTGAG+TGG | 0.724900 | tig0014834:-23856 | None:intergenic |
GCCGGAGTCTGTGACAACAA+TGG | 0.736244 | tig0014834:+30281 | Msa1355530:CDS |
GGAAATGACTCAGAGCACGG+CGG | 0.751014 | tig0014834:-23412 | None:intergenic |
TGTCACGGTTCCCAACAAAG+GGG | 0.761455 | tig0014834:+23332 | Msa1355530:five_prime_UTR |
AGGAGAAACTCTCACCACGG+CGG | 0.779583 | tig0014834:-23458 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATGTAACATAATATTTT+GGG | - | tig0014834:25318-25337 | None:intergenic | 10.0% |
!!! | AAATATGTAACATAATATTT+TGG | - | tig0014834:25319-25338 | None:intergenic | 10.0% |
!!! | ATATTTTATTATTTAGCTTT+TGG | + | tig0014834:25495-25514 | Msa1355530:intron | 10.0% |
!!! | GTATCTTTTAATTTATTATT+AGG | + | tig0014834:26070-26089 | Msa1355530:intron | 10.0% |
!!! | GTATCTTTTAATTTATTATT+AGG | - | tig0014834:26070-26089 | None:intergenic | 10.0% |
!!! | TCTACTTTTTTTTTTTTTTT+TGG | + | tig0014834:26633-26652 | Msa1355530:intron | 10.0% |
!! | AAATAATTTCCTAAATTATT+GGG | - | tig0014834:26894-26913 | None:intergenic | 10.0% |
!! | AAAATAATTTCCTAAATTAT+TGG | - | tig0014834:26895-26914 | None:intergenic | 10.0% |
!! | ATCATAATATATTAATATAG+TGG | + | tig0014834:28040-28059 | Msa1355530:intron | 10.0% |
!! | TCATAATATATTAATATAGT+GGG | + | tig0014834:28041-28060 | Msa1355530:intron | 10.0% |
!!! | TTTTTATTTTATATGTTGTT+TGG | - | tig0014834:28439-28458 | None:intergenic | 10.0% |
!! | TATAAAATAAAAAATTGTGT+TGG | + | tig0014834:28446-28465 | Msa1355530:intron | 10.0% |
!! | ATAAAATAAAAAATTGTGTT+GGG | + | tig0014834:28447-28466 | Msa1355530:intron | 10.0% |
!!! | TTCATATATAAAGTTTTAAA+GGG | + | tig0014834:29764-29783 | Msa1355530:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTGAAAG+GGG | - | tig0014834:29810-29829 | None:intergenic | 10.0% |
!!! | GTTTTTTTTTTTTTTTGAAA+GGG | - | tig0014834:29811-29830 | None:intergenic | 10.0% |
!!! | TGTTTTTTTTTTTTTTTGAA+AGG | - | tig0014834:29812-29831 | None:intergenic | 10.0% |
!! | AATGACAAATATATATATAT+GGG | - | tig0014834:29930-29949 | None:intergenic | 10.0% |
!! | TAATGACAAATATATATATA+TGG | - | tig0014834:29931-29950 | None:intergenic | 10.0% |
!! | GTATATTATTATATATTATG+TGG | + | tig0014834:31824-31843 | Msa1355530:intron | 10.0% |
!! | TAAAGCATATGTATAATTTA+AGG | - | tig0014834:24978-24997 | None:intergenic | 15.0% |
!!! | TATTATGTTACATATTTTTG+TGG | + | tig0014834:25322-25341 | Msa1355530:intron | 15.0% |
!!! | AAATACATATTCTAAAACAA+TGG | + | tig0014834:26599-26618 | Msa1355530:intron | 15.0% |
!! | AGTAAACAAGTATTATTTAA+GGG | - | tig0014834:26819-26838 | None:intergenic | 15.0% |
!! | TAGTAAACAAGTATTATTTA+AGG | - | tig0014834:26820-26839 | None:intergenic | 15.0% |
!! | AATAATTTCCTAAATTATTG+GGG | - | tig0014834:26893-26912 | None:intergenic | 15.0% |
!! | ATACATATCATTAAAATAGA+GGG | + | tig0014834:27032-27051 | Msa1355530:intron | 15.0% |
!!! | ACAATTGTTACTTAATATTT+TGG | + | tig0014834:28328-28347 | Msa1355530:intron | 15.0% |
!!! | CAATTGTTACTTAATATTTT+GGG | + | tig0014834:28329-28348 | Msa1355530:intron | 15.0% |
!!! | AATTGTTACTTAATATTTTG+GGG | + | tig0014834:28330-28349 | Msa1355530:intron | 15.0% |
!! | TGTAATATGAACATTTATTA+AGG | - | tig0014834:28590-28609 | None:intergenic | 15.0% |
!!! | TGTTTTTTTTACAGAAAAAA+TGG | - | tig0014834:29393-29412 | None:intergenic | 15.0% |
!!! | AATTTAAGAAAATTTTGTAG+TGG | - | tig0014834:29715-29734 | None:intergenic | 15.0% |
!!! | CTTCATATATAAAGTTTTAA+AGG | + | tig0014834:29763-29782 | Msa1355530:intron | 15.0% |
!! | ATGACAAATATATATATATG+GGG | - | tig0014834:29929-29948 | None:intergenic | 15.0% |
!!! | AATAAAATTAAAGTACCATA+GGG | - | tig0014834:31003-31022 | None:intergenic | 15.0% |
!!! | TAATAAAATTAAAGTACCAT+AGG | - | tig0014834:31004-31023 | None:intergenic | 15.0% |
!!! | TTTTCTTTTTCTTTATTGAA+TGG | - | tig0014834:31519-31538 | None:intergenic | 15.0% |
!! | AAATATATATAAGAACATTG+TGG | - | tig0014834:31729-31748 | None:intergenic | 15.0% |
!! | TTGAATTGAACTGAAATTTA+TGG | + | tig0014834:24233-24252 | Msa1355530:intron | 20.0% |
!!! | ATAGTGTTGCATTTTTTTTA+AGG | + | tig0014834:24465-24484 | Msa1355530:intron | 20.0% |
!! | AATTATACATATGCTTTAAC+TGG | + | tig0014834:24980-24999 | Msa1355530:intron | 20.0% |
!!! | ACCAATTTGATTTTATATGT+AGG | + | tig0014834:25358-25377 | Msa1355530:intron | 20.0% |
!!! | CCAATTTGATTTTATATGTA+GGG | + | tig0014834:25359-25378 | Msa1355530:intron | 20.0% |
!!! | CAATTTGATTTTATATGTAG+GGG | + | tig0014834:25360-25379 | Msa1355530:intron | 20.0% |
!! | TGATTGATATAATTCACTAA+AGG | + | tig0014834:25669-25688 | Msa1355530:intron | 20.0% |
!! | GATTGATATAATTCACTAAA+GGG | + | tig0014834:25670-25689 | Msa1355530:intron | 20.0% |
!! | TAATTTATACATGCAGAAAA+TGG | + | tig0014834:25890-25909 | Msa1355530:intron | 20.0% |
!! | AATTTATACATGCAGAAAAT+GGG | + | tig0014834:25891-25910 | Msa1355530:intron | 20.0% |
!! | TATGAAATTACATTACAACT+TGG | - | tig0014834:25982-26001 | None:intergenic | 20.0% |
!! | TGTAATGTAATTTCATATTG+AGG | + | tig0014834:25985-26004 | Msa1355530:intron | 20.0% |
!! | ATAAATTAAAAGATACCCTT+TGG | - | tig0014834:26066-26085 | None:intergenic | 20.0% |
!! | TAAATTAAAAGATACCCTAA+TGG | + | tig0014834:26148-26167 | Msa1355530:intron | 20.0% |
!!! | TACTTTTTCATAAATGTTTG+TGG | + | tig0014834:26274-26293 | Msa1355530:intron | 20.0% |
!! | GAAGAATCATTAAGAAAAAA+AGG | + | tig0014834:26298-26317 | Msa1355530:intron | 20.0% |
!! | ATGACTAATAAGAAAAGATT+CGG | - | tig0014834:26512-26531 | None:intergenic | 20.0% |
!! | GATACATATCATTAAAATAG+AGG | + | tig0014834:27031-27050 | Msa1355530:intron | 20.0% |
!! | TACATATCATTAAAATAGAG+GGG | + | tig0014834:27033-27052 | Msa1355530:intron | 20.0% |
!! | GAGATAAAAAAAAAATCTCT+TGG | + | tig0014834:27055-27074 | Msa1355530:intron | 20.0% |
!!! | CAATTTTTATTGTGTTTGAT+TGG | + | tig0014834:27526-27545 | Msa1355530:intron | 20.0% |
!! | TACATGCTTGAAAAAAAAAT+TGG | - | tig0014834:28369-28388 | None:intergenic | 20.0% |
!!! | AAATAATAACTTGCTAATGA+AGG | + | tig0014834:29570-29589 | Msa1355530:intron | 20.0% |
!!! | AGTGTGACATAAATTTTTTT+TGG | + | tig0014834:30006-30025 | Msa1355530:intron | 20.0% |
!! | AAAATGTATTTAGCTATTAC+CGG | + | tig0014834:30056-30075 | Msa1355530:intron | 20.0% |
!! | TGCCATAAATTAAATGTAAT+AGG | + | tig0014834:30180-30199 | Msa1355530:intron | 20.0% |
!! | GCCATAAATTAAATGTAATA+GGG | + | tig0014834:30181-30200 | Msa1355530:intron | 20.0% |
!!! | TCCCTATTACATTTAATTTA+TGG | - | tig0014834:30185-30204 | None:intergenic | 20.0% |
!! | TATTAATAAACATAGAAGCA+AGG | - | tig0014834:30208-30227 | None:intergenic | 20.0% |
!!! | GAAATTTTTTGATTGAAGTT+AGG | - | tig0014834:30421-30440 | None:intergenic | 20.0% |
!! | AACATTTACATTTAAACTGA+AGG | - | tig0014834:30553-30572 | None:intergenic | 20.0% |
!!! | TATGTTTTTCTGACTTTAAT+TGG | + | tig0014834:30825-30844 | Msa1355530:intron | 20.0% |
!! | AATATTAATCCTCAAAAGAA+AGG | - | tig0014834:31470-31489 | None:intergenic | 20.0% |
! | TGATTGATGAAGAAATGAAA+CGG | - | tig0014834:23719-23738 | None:intergenic | 25.0% |
!!! | AGTTTTAATCAGTGAAGTAT+TGG | + | tig0014834:23995-24014 | Msa1355530:CDS | 25.0% |
! | GAATTGTTAGTGATGATAAT+TGG | + | tig0014834:24290-24309 | Msa1355530:intron | 25.0% |
!!! | AGTTTTTAGAGAACTCTTTT+CGG | + | tig0014834:24618-24637 | Msa1355530:CDS | 25.0% |
! | TTCCATTAATGATTGGTATA+TGG | + | tig0014834:24808-24827 | Msa1355530:CDS | 25.0% |
! | GACAACTGAAAAAGAATAAA+AGG | - | tig0014834:25023-25042 | None:intergenic | 25.0% |
!!! | TTATTCTTTTTCAGTTGTCT+TGG | + | tig0014834:25024-25043 | Msa1355530:intron | 25.0% |
!!! | ACCTTTTTTATTCTTTTTCC+CGG | + | tig0014834:25117-25136 | Msa1355530:intron | 25.0% |
! | TATGGAAATATTATTGACCT+CGG | - | tig0014834:25216-25235 | None:intergenic | 25.0% |
! | CCCTACATATAAAATCAAAT+TGG | - | tig0014834:25362-25381 | None:intergenic | 25.0% |
!!! | TTATGTTTTAAAGCTTATCG+TGG | + | tig0014834:25603-25622 | Msa1355530:intron | 25.0% |
!!! | CGTGGCATTATTTTTAAATT+TGG | + | tig0014834:25621-25640 | Msa1355530:intron | 25.0% |
!! | ATTTTTCTCAGTAACTGATA+AGG | + | tig0014834:25743-25762 | Msa1355530:intron | 25.0% |
!! | AGAAAATGGGCTTTAATTTA+AGG | + | tig0014834:25904-25923 | Msa1355530:intron | 25.0% |
! | CAAAGAAGGTAAACTTATAA+AGG | - | tig0014834:26016-26035 | None:intergenic | 25.0% |
! | TATAAAATGCTGAACAAAGA+AGG | - | tig0014834:26030-26049 | None:intergenic | 25.0% |
!! | TGCTAATTTTGTTAGAAATC+AGG | + | tig0014834:26332-26351 | Msa1355530:intron | 25.0% |
!!! | TTTTTTCCTTTCTTTCACTT+TGG | - | tig0014834:26384-26403 | None:intergenic | 25.0% |
! | AGAAAGGAAAAAACAAACAT+CGG | + | tig0014834:26391-26410 | Msa1355530:intron | 25.0% |
! | TGACTAATAAGAAAAGATTC+GGG | - | tig0014834:26511-26530 | None:intergenic | 25.0% |
!!! | TATTTCCCTTTTGAAAACAT+GGG | - | tig0014834:26584-26603 | None:intergenic | 25.0% |
!!! | TTTTGTTGTGTTATAGATAC+AGG | + | tig0014834:26695-26714 | Msa1355530:intron | 25.0% |
!! | TTTGTTGTGTTATAGATACA+GGG | + | tig0014834:26696-26715 | Msa1355530:intron | 25.0% |
!! | TCTTGTGGAAATTTAAAGTA+AGG | - | tig0014834:26924-26943 | None:intergenic | 25.0% |
! | TCTAAACCTAAAATATGAAG+GGG | - | tig0014834:26953-26972 | None:intergenic | 25.0% |
! | GTCTAAACCTAAAATATGAA+GGG | - | tig0014834:26954-26973 | None:intergenic | 25.0% |
! | TGTCTAAACCTAAAATATGA+AGG | - | tig0014834:26955-26974 | None:intergenic | 25.0% |
!! | TATTAAACCAAAGAAAGCAT+AGG | - | tig0014834:27218-27237 | None:intergenic | 25.0% |
!! | TTTCTTTGGTTTAATAACCA+AGG | + | tig0014834:27222-27241 | Msa1355530:intron | 25.0% |
!! | TTCAAATAAAACCGTTTTAC+AGG | + | tig0014834:27254-27273 | Msa1355530:intron | 25.0% |
! | GATGTCAAAAATAAACACTA+TGG | - | tig0014834:27318-27337 | None:intergenic | 25.0% |
! | ACCAGTTATTCTTTAACTAT+TGG | + | tig0014834:27460-27479 | Msa1355530:intron | 25.0% |
! | ACCAATAGTTAAAGAATAAC+TGG | - | tig0014834:27464-27483 | None:intergenic | 25.0% |
! | AGAAAATGTTTAACAGAAAG+AGG | - | tig0014834:27802-27821 | None:intergenic | 25.0% |
!!! | ATTTTCTCCTATTCTTGTTT+GGG | + | tig0014834:27815-27834 | Msa1355530:intron | 25.0% |
! | TTATGATCTATTCCTTTGTT+GGG | - | tig0014834:28027-28046 | None:intergenic | 25.0% |
! | ATTATGATCTATTCCTTTGT+TGG | - | tig0014834:28028-28047 | None:intergenic | 25.0% |
! | TGTTTCATTGAAAACATACT+GGG | - | tig0014834:28550-28569 | None:intergenic | 25.0% |
! | AAAAACATTTCTATGAGAGT+AGG | - | tig0014834:28691-28710 | None:intergenic | 25.0% |
!! | TACTCTCATAGAAATGTTTT+TGG | + | tig0014834:28690-28709 | Msa1355530:CDS | 25.0% |
!! | ACTCTCATAGAAATGTTTTT+GGG | + | tig0014834:28691-28710 | Msa1355530:CDS | 25.0% |
! | TAAACCAAGGTAATTAAAAC+TGG | + | tig0014834:29191-29210 | Msa1355530:intron | 25.0% |
! | TACAGAAAAAATGGAAATCA+CGG | - | tig0014834:29384-29403 | None:intergenic | 25.0% |
! | TTACTTTGCAATGAAAAGTT+TGG | + | tig0014834:29682-29701 | Msa1355530:intron | 25.0% |
! | TACTTTGCAATGAAAAGTTT+GGG | + | tig0014834:29683-29702 | Msa1355530:intron | 25.0% |
! | TAACTCAAGGTAATCAAAAT+CGG | - | tig0014834:30131-30150 | None:intergenic | 25.0% |
!!! | ATGCTATATGTTACTTGTTT+TGG | + | tig0014834:30365-30384 | Msa1355530:intron | 25.0% |
! | ATCAAAAAATTTCCTTGTAG+TGG | + | tig0014834:30428-30447 | Msa1355530:intron | 25.0% |
!!! | TCTTTTGAGGATTAATATTC+TGG | + | tig0014834:31471-31490 | Msa1355530:intron | 25.0% |
! | GACTGTAAACATCATAAAAT+AGG | - | tig0014834:31588-31607 | None:intergenic | 25.0% |
!! | TTTTATGATGTTTACAGTCA+AGG | + | tig0014834:31589-31608 | Msa1355530:intron | 25.0% |
! | CACTTCAAATCTACAATTAT+AGG | + | tig0014834:31630-31649 | Msa1355530:intron | 25.0% |
! | TTGTGGATATAGTCATTTAA+AGG | - | tig0014834:31712-31731 | None:intergenic | 25.0% |
!!! | TTTTAAATTGACTTCTCTAC+TGG | + | tig0014834:31748-31767 | Msa1355530:intron | 25.0% |
! | TTTGCCAATATAGTTTATCT+AGG | + | tig0014834:31788-31807 | Msa1355530:intron | 25.0% |
! | TAATAATATACGCCTCATAA+AGG | - | tig0014834:31815-31834 | None:intergenic | 25.0% |
!!! | TGTGGGTTTTTGTTTTTATT+AGG | + | tig0014834:31842-31861 | Msa1355530:intron | 25.0% |
!!! | ATTACGACTTTTCTGAAATA+AGG | - | tig0014834:32068-32087 | None:intergenic | 25.0% |
!! | TGTGATTTGAGATAATTTAC+AGG | + | tig0014834:32180-32199 | Msa1355530:intron | 25.0% |
!! | TCATGTAGATTTTGTACTAT+AGG | + | tig0014834:32232-32251 | Msa1355530:three_prime_UTR | 25.0% |
ATATCAGAAGTCAGAATGAA+AGG | - | tig0014834:23481-23500 | None:intergenic | 30.0% | |
TTTCATTCTGACTTCTGATA+TGG | + | tig0014834:23480-23499 | Msa1355530:five_prime_UTR | 30.0% | |
TTCATTCTGACTTCTGATAT+GGG | + | tig0014834:23481-23500 | Msa1355530:five_prime_UTR | 30.0% | |
!!! | TGAGAATGTAAGGTTTTGAA+TGG | - | tig0014834:23780-23799 | None:intergenic | 30.0% |
!! | AGAATGAGATTTTTGGAGAA+CGG | - | tig0014834:23877-23896 | None:intergenic | 30.0% |
! | AGCATAGAGAATGAGATTTT+TGG | - | tig0014834:23884-23903 | None:intergenic | 30.0% |
! | GTATTGGTGAGAAATAAAGA+CGG | + | tig0014834:24011-24030 | Msa1355530:CDS | 30.0% |
TAAAGCTTGTAGACCTAATT+CGG | + | tig0014834:24082-24101 | Msa1355530:CDS | 30.0% | |
GTTCATCGGATTATTAATAG+TGG | + | tig0014834:24134-24153 | Msa1355530:CDS | 30.0% | |
!! | ATATTTTTGTTCGTGTGTTC+CGG | + | tig0014834:24157-24176 | Msa1355530:CDS | 30.0% |
TAGATATGTTATGTGAATGC+TGG | + | tig0014834:24310-24329 | Msa1355530:intron | 30.0% | |
CGATTTCTTCCATTAATGAT+TGG | + | tig0014834:24801-24820 | Msa1355530:CDS | 30.0% | |
CTCCATATACCAATCATTAA+TGG | - | tig0014834:24813-24832 | None:intergenic | 30.0% | |
AAGTTAAGGGAAATTTACCA+TGG | - | tig0014834:24849-24868 | None:intergenic | 30.0% | |
GAAGTTTGAACACAAGTTAA+GGG | - | tig0014834:24862-24881 | None:intergenic | 30.0% | |
TGAAGTTTGAACACAAGTTA+AGG | - | tig0014834:24863-24882 | None:intergenic | 30.0% | |
ATATAGTCATGCTTTGTGAT+TGG | + | tig0014834:24885-24904 | Msa1355530:intron | 30.0% | |
! | TTTCATGTTTTCAGTTGTCT+TGG | + | tig0014834:24926-24945 | Msa1355530:intron | 30.0% |
TAGAGCATACGTATAACTTA+AGG | - | tig0014834:25076-25095 | None:intergenic | 30.0% | |
GATACCTAATATGGAAATCA+AGG | - | tig0014834:25143-25162 | None:intergenic | 30.0% | |
TTTCCATACGATTTCTTGAT+AGG | + | tig0014834:25228-25247 | Msa1355530:CDS | 30.0% | |
CAAAACCTGAAACAATACTT+CGG | + | tig0014834:25403-25422 | Msa1355530:CDS | 30.0% | |
TTAATTGAATATCCAGTGCT+GGG | - | tig0014834:25465-25484 | None:intergenic | 30.0% | |
TTTAATTGAATATCCAGTGC+TGG | - | tig0014834:25466-25485 | None:intergenic | 30.0% | |
GTTACTGAGAAAAATCAAGA+AGG | - | tig0014834:25738-25757 | None:intergenic | 30.0% | |
! | CAGTAACTGATAAGGATTTT+TGG | + | tig0014834:25751-25770 | Msa1355530:intron | 30.0% |
! | TCATCTGTAATTGCATTTTC+AGG | + | tig0014834:25776-25795 | Msa1355530:intron | 30.0% |
TGTAGAAACTGTATTAACGA+TGG | + | tig0014834:25827-25846 | Msa1355530:CDS | 30.0% | |
GTAGAAACTGTATTAACGAT+GGG | + | tig0014834:25828-25847 | Msa1355530:CDS | 30.0% | |
TAGAAACTGTATTAACGATG+GGG | + | tig0014834:25829-25848 | Msa1355530:CDS | 30.0% | |
ATGTAATTTCATATTGAGGC+AGG | + | tig0014834:25989-26008 | Msa1355530:intron | 30.0% | |
TGTAATTTCATATTGAGGCA+GGG | + | tig0014834:25990-26009 | Msa1355530:intron | 30.0% | |
ATTACAACTCATTTAAGTCC+TGG | - | tig0014834:26475-26494 | None:intergenic | 30.0% | |
TTCTTATTAGTCATCCAGTA+AGG | + | tig0014834:26518-26537 | Msa1355530:intron | 30.0% | |
CATCATATATAACACCTTAC+TGG | - | tig0014834:26535-26554 | None:intergenic | 30.0% | |
! | TTCAACCCATGTTTTCAAAA+GGG | + | tig0014834:26576-26595 | Msa1355530:intron | 30.0% |
!! | GTATTTCCCTTTTGAAAACA+TGG | - | tig0014834:26585-26604 | None:intergenic | 30.0% |
AGAATCTGTAAAAAACGTCA+AGG | - | tig0014834:26865-26884 | None:intergenic | 30.0% | |
TGATGGCAAATATAAGTAGA+AGG | + | tig0014834:27000-27019 | Msa1355530:intron | 30.0% | |
TGTAATCCTGCAGATATAAA+TGG | - | tig0014834:27101-27120 | None:intergenic | 30.0% | |
! | GAGTTAATGCTTTGTCTTTT+AGG | + | tig0014834:27189-27208 | Msa1355530:intron | 30.0% |
TATTTGAATGAAAGCAACCT+TGG | - | tig0014834:27242-27261 | None:intergenic | 30.0% | |
GAGGTAAATAACCTGTAAAA+CGG | - | tig0014834:27268-27287 | None:intergenic | 30.0% | |
AAACTAAGAGATGAGACATA+GGG | + | tig0014834:27556-27575 | Msa1355530:intron | 30.0% | |
! | CATTTTCTCCTATTCTTGTT+TGG | + | tig0014834:27814-27833 | Msa1355530:intron | 30.0% |
TATTGTGGTATTTGTAGTGA+TGG | - | tig0014834:27892-27911 | None:intergenic | 30.0% | |
AGAACATTCCAGAACAAAAT+AGG | + | tig0014834:27947-27966 | Msa1355530:intron | 30.0% | |
! | TCTTTCTTCCTATTTTGTTC+TGG | - | tig0014834:27958-27977 | None:intergenic | 30.0% |
GAACAAAATAGGAAGAAAGA+AGG | + | tig0014834:27958-27977 | Msa1355530:intron | 30.0% | |
!!! | GTTTTTTTTCAGGCTTTCTA+AGG | + | tig0014834:28071-28090 | Msa1355530:intron | 30.0% |
GTGTCTTTCATGAATTATCA+TGG | - | tig0014834:28121-28140 | None:intergenic | 30.0% | |
GTTTCATTGAAAACATACTG+GGG | - | tig0014834:28549-28568 | None:intergenic | 30.0% | |
CTGTTTCATTGAAAACATAC+TGG | - | tig0014834:28551-28570 | None:intergenic | 30.0% | |
TTCATATTACATGTTGCGAA+TGG | + | tig0014834:28599-28618 | Msa1355530:intron | 30.0% | |
! | ATCTGGAACAATAATGATTC+AGG | + | tig0014834:28815-28834 | Msa1355530:CDS | 30.0% |
ATGATTCAGGTAATCTCTAA+AGG | + | tig0014834:28828-28847 | Msa1355530:intron | 30.0% | |
! | TTTATTTGTTAAGCCTCCTT+TGG | + | tig0014834:28851-28870 | Msa1355530:intron | 30.0% |
ACTTAACTTTCTATCACCAA+AGG | - | tig0014834:28870-28889 | None:intergenic | 30.0% | |
! | AAAAAAGTTAATGAAGCACC+TGG | - | tig0014834:29067-29086 | None:intergenic | 30.0% |
!!! | AGGTGCTTCATTAACTTTTT+TGG | + | tig0014834:29066-29085 | Msa1355530:intron | 30.0% |
!! | AAGTATTGAAAGAGTTAGAG+TGG | - | tig0014834:29141-29160 | None:intergenic | 30.0% |
TTTCTCCCTGTTCTTATATA+GGG | - | tig0014834:29289-29308 | None:intergenic | 30.0% | |
! | TTTTCTCCCTGTTCTTATAT+AGG | - | tig0014834:29290-29309 | None:intergenic | 30.0% |
ATACAGACGAAAATTGAGAA+AGG | + | tig0014834:29536-29555 | Msa1355530:intron | 30.0% | |
AAAATTGAGAAAGGAAGAGA+CGG | + | tig0014834:29545-29564 | Msa1355530:intron | 30.0% | |
! | AGAAAATTTTGTAGTGGTGT+AGG | - | tig0014834:29709-29728 | None:intergenic | 30.0% |
ATATCCCACATAAAAACTAG+TGG | + | tig0014834:29888-29907 | Msa1355530:intron | 30.0% | |
TATCCCACATAAAAACTAGT+GGG | + | tig0014834:29889-29908 | Msa1355530:intron | 30.0% | |
AAAATTGAGACTGTTTACAC+TGG | + | tig0014834:30479-30498 | Msa1355530:CDS | 30.0% | |
! | GGTTAGTTATCAACTGAATT+CGG | + | tig0014834:30526-30545 | Msa1355530:intron | 30.0% |
TACCTTAAATTAAGACGAGT+AGG | - | tig0014834:30700-30719 | None:intergenic | 30.0% | |
AAGTGCTTGTCTTGAAAATT+AGG | - | tig0014834:31077-31096 | None:intergenic | 30.0% | |
AACAAATTTCATATTCAGCC+AGG | - | tig0014834:31107-31126 | None:intergenic | 30.0% | |
CACTAAGAAATCACACAATT+CGG | - | tig0014834:31131-31150 | None:intergenic | 30.0% | |
AATAGAAACAGTGAAGAATC+AGG | - | tig0014834:31197-31216 | None:intergenic | 30.0% | |
GAAAATATGACACATTCTAC+TGG | - | tig0014834:31231-31250 | None:intergenic | 30.0% | |
! | TGTGTCATATTTTCTGACTA+TGG | + | tig0014834:31237-31256 | Msa1355530:CDS | 30.0% |
! | TTAATGCATCCTTTCTTTTG+AGG | + | tig0014834:31458-31477 | Msa1355530:intron | 30.0% |
CAAAGATAAGCCAATAAAGT+TGG | - | tig0014834:31679-31698 | None:intergenic | 30.0% | |
! | ATTGGCTTATCTTTGTACTT+TGG | + | tig0014834:31684-31703 | Msa1355530:intron | 30.0% |
AGGACCTAGATAAACTATAT+TGG | - | tig0014834:31795-31814 | None:intergenic | 30.0% | |
TTAATGACAAGAAAGAGAAG+AGG | + | tig0014834:31966-31985 | Msa1355530:CDS | 30.0% | |
!!! | ATGATTCTTTTTTTTTCGCG+TGG | + | tig0014834:32042-32061 | Msa1355530:intron | 30.0% |
TTCCCATAGATGAATTGAAA+TGG | + | tig0014834:32136-32155 | Msa1355530:intron | 30.0% | |
AGCCATTTCAATTCATCTAT+GGG | - | tig0014834:32141-32160 | None:intergenic | 30.0% | |
GATAATTTACAGGATATGCA+AGG | + | tig0014834:32190-32209 | Msa1355530:intron | 30.0% | |
TACTATAGGATCATTTGAAG+AGG | + | tig0014834:32246-32265 | Msa1355530:three_prime_UTR | 30.0% | |
! | TTTCTTTTCACCCCTTTGTT+GGG | - | tig0014834:23345-23364 | None:intergenic | 35.0% |
GACAAAACCGGGTTTAATAT+GGG | - | tig0014834:23524-23543 | None:intergenic | 35.0% | |
AGACAAAACCGGGTTTAATA+TGG | - | tig0014834:23525-23544 | None:intergenic | 35.0% | |
GTTAGTGAAGTGAGAATGTA+AGG | - | tig0014834:23790-23809 | None:intergenic | 35.0% | |
!! | TGCTGGTTTCTTGTTGTATA+AGG | + | tig0014834:24327-24346 | Msa1355530:intron | 35.0% |
! | TGGTTTCTTGTTGTATAAGG+TGG | + | tig0014834:24330-24349 | Msa1355530:intron | 35.0% |
! | ATATGAGTACTGTTTCCTTG+TGG | + | tig0014834:24528-24547 | Msa1355530:intron | 35.0% |
TACTGTTTCCTTGTGGTATA+AGG | + | tig0014834:24535-24554 | Msa1355530:intron | 35.0% | |
AATCCTTGGAACTCTTGATT+TGG | - | tig0014834:24566-24585 | None:intergenic | 35.0% | |
AAATCAAGAGTTCCAAGGAT+TGG | + | tig0014834:24565-24584 | Msa1355530:CDS | 35.0% | |
TGAAGGAGCTAATGTTATTC+CGG | + | tig0014834:24592-24611 | Msa1355530:CDS | 35.0% | |
! | GAGTTCTCTAAAAACTTAGC+CGG | - | tig0014834:24614-24633 | None:intergenic | 35.0% |
! | TTAGAGAACTCTTTTCGGAA+TGG | + | tig0014834:24623-24642 | Msa1355530:CDS | 35.0% |
! | AACTCTTTTCGGAATGGATA+TGG | + | tig0014834:24629-24648 | Msa1355530:CDS | 35.0% |
TTTGTGATTGGTGGAAATTC+AGG | + | tig0014834:24897-24916 | Msa1355530:intron | 35.0% | |
!! | ATGCTTTAACTGGCTTTCAT+TGG | + | tig0014834:24990-25009 | Msa1355530:intron | 35.0% |
AGTTATACGTATGCTCTAAC+TGG | + | tig0014834:25078-25097 | Msa1355530:intron | 35.0% | |
!!! | ATGCTCTAACTGGTTTTCAT+TGG | + | tig0014834:25088-25107 | Msa1355530:intron | 35.0% |
GCCGGGAAAAAGAATAAAAA+AGG | - | tig0014834:25121-25140 | None:intergenic | 35.0% | |
TCTACAGCTGATACCTAATA+TGG | - | tig0014834:25152-25171 | None:intergenic | 35.0% | |
! | TCTGAGATTACAAGTTTCAG+AGG | + | tig0014834:25190-25209 | Msa1355530:CDS | 35.0% |
CTTCCTATCAAGAAATCGTA+TGG | - | tig0014834:25234-25253 | None:intergenic | 35.0% | |
TTTCTTGATAGGAAGACGTA+AGG | + | tig0014834:25239-25258 | Msa1355530:intron | 35.0% | |
!! | ATTTGCCGAAGTATTGTTTC+AGG | - | tig0014834:25411-25430 | None:intergenic | 35.0% |
TGGTAGTTGACAACATTCTA+CGG | + | tig0014834:25641-25660 | Msa1355530:intron | 35.0% | |
ACTGAGAAAAATCAAGAAGG+TGG | - | tig0014834:25735-25754 | None:intergenic | 35.0% | |
! | TATAAATTACCTGCTGGTTG+GGG | - | tig0014834:25879-25898 | None:intergenic | 35.0% |
! | GTATAAATTACCTGCTGGTT+GGG | - | tig0014834:25880-25899 | None:intergenic | 35.0% |
TGTATAAATTACCTGCTGGT+TGG | - | tig0014834:25881-25900 | None:intergenic | 35.0% | |
TGCATGTATAAATTACCTGC+TGG | - | tig0014834:25885-25904 | None:intergenic | 35.0% | |
TAGTTAGCACTTACAACTGA+CGG | - | tig0014834:25953-25972 | None:intergenic | 35.0% | |
ATAATCCTAACTCTTGCCAA+AGG | + | tig0014834:26047-26066 | Msa1355530:intron | 35.0% | |
TAATCCTAACTCTTGCCAAA+GGG | + | tig0014834:26048-26067 | Msa1355530:intron | 35.0% | |
ACAAGACCAAAGTGAAAGAA+AGG | + | tig0014834:26375-26394 | Msa1355530:intron | 35.0% | |
!!! | TAAGTAGCTTGCTTTTGTAG+AGG | + | tig0014834:26436-26455 | Msa1355530:intron | 35.0% |
GAGTTGTAATGTTCTTCAAG+TGG | + | tig0014834:26485-26504 | Msa1355530:intron | 35.0% | |
! | CTTCAACCCATGTTTTCAAA+AGG | + | tig0014834:26575-26594 | Msa1355530:intron | 35.0% |
! | GTTTTCCCCTATTAGTTCAA+TGG | + | tig0014834:26655-26674 | Msa1355530:intron | 35.0% |
! | AGAGTGCCATTGAACTAATA+GGG | - | tig0014834:26664-26683 | None:intergenic | 35.0% |
TTGTGTTATAGATACAGGGA+AGG | + | tig0014834:26700-26719 | Msa1355530:intron | 35.0% | |
! | GGTTGATTTAGTGATGAATG+TGG | + | tig0014834:26721-26740 | Msa1355530:CDS | 35.0% |
TGATTTAGTGATGAATGTGG+TGG | + | tig0014834:26724-26743 | Msa1355530:CDS | 35.0% | |
ATCTGTAAAAAACGTCAAGG+AGG | - | tig0014834:26862-26881 | None:intergenic | 35.0% | |
! | TCTAGCTTCCCCAATAATTT+AGG | + | tig0014834:26882-26901 | Msa1355530:intron | 35.0% |
TATATCTGCAGGATTACAAG+TGG | + | tig0014834:27103-27122 | Msa1355530:intron | 35.0% | |
!! | TTCTTTTCTAGTCACGTGAT+GGG | + | tig0014834:27156-27175 | Msa1355530:intron | 35.0% |
AGGTTATTTACCTCTGTTAC+TGG | + | tig0014834:27274-27293 | Msa1355530:intron | 35.0% | |
ACTATGGAACTAGCAGTATA+TGG | - | tig0014834:27302-27321 | None:intergenic | 35.0% | |
TCTAATGCAAAACTGTGTAC+AGG | - | tig0014834:27387-27406 | None:intergenic | 35.0% | |
CAAACTAAGAGATGAGACAT+AGG | + | tig0014834:27555-27574 | Msa1355530:intron | 35.0% | |
TGAGAATGGAGAGAAAAGAA+GGG | - | tig0014834:27654-27673 | None:intergenic | 35.0% | |
TTTAACAGAAAGAGGAGTTG+TGG | - | tig0014834:27794-27813 | None:intergenic | 35.0% | |
GAAAGCCTGAAAAAAAACGA+TGG | - | tig0014834:28069-28088 | None:intergenic | 35.0% | |
TAACTTTCTATCACCAAAGG+AGG | - | tig0014834:28867-28886 | None:intergenic | 35.0% | |
!!! | TTTTAGAATTCAAGAACGCC+CGG | + | tig0014834:28921-28940 | Msa1355530:intron | 35.0% |
TTACCATGAACAATTGTTCC+GGG | - | tig0014834:28942-28961 | None:intergenic | 35.0% | |
GTTACCATGAACAATTGTTC+CGG | - | tig0014834:28943-28962 | None:intergenic | 35.0% | |
AACAATTGTTCATGGTAACC+TGG | + | tig0014834:28944-28963 | Msa1355530:CDS | 35.0% | |
TACCTTGGTTTAACTACACT+GGG | - | tig0014834:29183-29202 | None:intergenic | 35.0% | |
TTACCTTGGTTTAACTACAC+TGG | - | tig0014834:29184-29203 | None:intergenic | 35.0% | |
CAAGGTAATTAAAACTGGAC+CGG | + | tig0014834:29196-29215 | Msa1355530:intron | 35.0% | |
! | TTTTGGACCAGATATAGGTT+TGG | - | tig0014834:29252-29271 | None:intergenic | 35.0% |
AAACCTATATCTGGTCCAAA+AGG | + | tig0014834:29251-29270 | Msa1355530:intron | 35.0% | |
TATAAGAACAGGGAGAAAAC+CGG | + | tig0014834:29291-29310 | Msa1355530:intron | 35.0% | |
! | ATTTTCGATCCACAACAAAG+GGG | - | tig0014834:29450-29469 | None:intergenic | 35.0% |
! | GATTTTCGATCCACAACAAA+GGG | - | tig0014834:29451-29470 | None:intergenic | 35.0% |
! | AGATTTTCGATCCACAACAA+AGG | - | tig0014834:29452-29471 | None:intergenic | 35.0% |
!!! | ACACCCACTAGTTTTTATGT+GGG | - | tig0014834:29895-29914 | None:intergenic | 35.0% |
TGATTACATGGTGTAACTCA+AGG | - | tig0014834:30144-30163 | None:intergenic | 35.0% | |
TAATCTCGCTAGTGATTACA+TGG | - | tig0014834:30156-30175 | None:intergenic | 35.0% | |
ACAATGGTGTTCCTATCATT+AGG | + | tig0014834:30297-30316 | Msa1355530:CDS | 35.0% | |
CAATGGTGTTCCTATCATTA+GGG | + | tig0014834:30298-30317 | Msa1355530:CDS | 35.0% | |
TTGTAACGATCCCTAATGAT+AGG | - | tig0014834:30311-30330 | None:intergenic | 35.0% | |
ATTACAACCTTGCAGTAAGA+GGG | - | tig0014834:30337-30356 | None:intergenic | 35.0% | |
GTTTCTTATCATTACTTGCC+TGG | + | tig0014834:30570-30589 | Msa1355530:intron | 35.0% | |
TTTGCAGTTTGTCCTTAACA+TGG | + | tig0014834:30594-30613 | Msa1355530:intron | 35.0% | |
TTTGTCCTTAACATGGAACA+AGG | + | tig0014834:30601-30620 | Msa1355530:CDS | 35.0% | |
! | TGATTGGTTATCCTTCACTA+GGG | + | tig0014834:30639-30658 | Msa1355530:CDS | 35.0% |
GTCCTACTCGTCTTAATTTA+AGG | + | tig0014834:30695-30714 | Msa1355530:CDS | 35.0% | |
TATATTCAACACCCTTCTCT+TGG | + | tig0014834:30729-30748 | Msa1355530:intron | 35.0% | |
AGTTACTCTTTCCAAGAGAA+GGG | - | tig0014834:30743-30762 | None:intergenic | 35.0% | |
TAGTTACTCTTTCCAAGAGA+AGG | - | tig0014834:30744-30763 | None:intergenic | 35.0% | |
GAAAGAGTAACTAGTACCAT+TGG | + | tig0014834:30751-30770 | Msa1355530:intron | 35.0% | |
AGAAGCTAAACTAATTGAGC+AGG | - | tig0014834:31035-31054 | None:intergenic | 35.0% | |
CGAATTGTGTGATTTCTTAG+TGG | + | tig0014834:31129-31148 | Msa1355530:intron | 35.0% | |
TTAATTGATCCTTACCCACT+TGG | + | tig0014834:31323-31342 | Msa1355530:intron | 35.0% | |
TAATTGATCCTTACCCACTT+GGG | + | tig0014834:31324-31343 | Msa1355530:intron | 35.0% | |
TATGATGTTTACAGTCAAGG+AGG | + | tig0014834:31592-31611 | Msa1355530:intron | 35.0% | |
! | GTAGATTTGAAGTGTGTGTT+TGG | - | tig0014834:31624-31643 | None:intergenic | 35.0% |
CTAACCAGATCCAACTTTAT+TGG | + | tig0014834:31666-31685 | Msa1355530:intron | 35.0% | |
TAAGCCAATAAAGTTGGATC+TGG | - | tig0014834:31673-31692 | None:intergenic | 35.0% | |
GTTTATCTAGGTCCTTTATG+AGG | + | tig0014834:31800-31819 | Msa1355530:intron | 35.0% | |
AAAGCATATTCAAGACGCAA+AGG | - | tig0014834:31947-31966 | None:intergenic | 35.0% | |
AAAGAGAAGAGGTTTCACTT+TGG | + | tig0014834:31977-31996 | Msa1355530:CDS | 35.0% | |
GAGTTGGATACAGAAACTAA+AGG | + | tig0014834:31999-32018 | Msa1355530:CDS | 35.0% | |
GAGCCATTTCAATTCATCTA+TGG | - | tig0014834:32142-32161 | None:intergenic | 35.0% | |
TGAATTGAAATGGCTCATTC+TGG | + | tig0014834:32146-32165 | Msa1355530:intron | 35.0% | |
GATCATTTGAAGAGGAAGAT+GGG | + | tig0014834:32254-32273 | Msa1355530:three_prime_UTR | 35.0% | |
ATCATTTGAAGAGGAAGATG+GGG | + | tig0014834:32255-32274 | Msa1355530:three_prime_UTR | 35.0% | |
! | CTTTCTTTTCACCCCTTTGT+TGG | - | tig0014834:23346-23365 | None:intergenic | 40.0% |
GGGGTGAAAAGAAAGAAACA+AGG | + | tig0014834:23351-23370 | Msa1355530:five_prime_UTR | 40.0% | |
AGTGATTGTGTTGTGTTGCA+CGG | - | tig0014834:23594-23613 | None:intergenic | 40.0% | |
GATGCTGTGGAATTTGAATG+TGG | - | tig0014834:23647-23666 | None:intergenic | 40.0% | |
!!! | TCGTTTTGAGGCATTGTGAA+GGG | - | tig0014834:23690-23709 | None:intergenic | 40.0% |
!! | GTTTTGAATGGTGAAGTGCT+GGG | - | tig0014834:23768-23787 | None:intergenic | 40.0% |
AGGTGCAAGATGATGTTCAT+CGG | + | tig0014834:24120-24139 | Msa1355530:CDS | 40.0% | |
! | TGGTATTCGATTGGTGTTTC+AGG | + | tig0014834:24199-24218 | Msa1355530:CDS | 40.0% |
! | TGGTTCTACCTTATACCACA+AGG | - | tig0014834:24546-24565 | None:intergenic | 40.0% |
GAACCAAATCAAGAGTTCCA+AGG | + | tig0014834:24560-24579 | Msa1355530:CDS | 40.0% | |
! | TTCCAAGGATTGGTATGTGA+AGG | + | tig0014834:24575-24594 | Msa1355530:CDS | 40.0% |
AACAATTGCACACATAAGGG+GGG | - | tig0014834:24683-24702 | None:intergenic | 40.0% | |
CAACAATTGCACACATAAGG+GGG | - | tig0014834:24684-24703 | None:intergenic | 40.0% | |
GCAACAATTGCACACATAAG+GGG | - | tig0014834:24685-24704 | None:intergenic | 40.0% | |
GGCAACAATTGCACACATAA+GGG | - | tig0014834:24686-24705 | None:intergenic | 40.0% | |
TGGCAACAATTGCACACATA+AGG | - | tig0014834:24687-24706 | None:intergenic | 40.0% | |
TCGCTGTTCTCAAATTTACG+TGG | + | tig0014834:24733-24752 | Msa1355530:intron | 40.0% | |
CAGGGAAAGTTATCAACTTG+AGG | + | tig0014834:24765-24784 | Msa1355530:intron | 40.0% | |
AGTTATCAACTTGAGGCGAT+TGG | + | tig0014834:24772-24791 | Msa1355530:CDS | 40.0% | |
AATGATTGGTATATGGAGCG+TGG | + | tig0014834:24815-24834 | Msa1355530:CDS | 40.0% | |
TAGTCATGCTTTGTGATTGG+TGG | + | tig0014834:24888-24907 | Msa1355530:intron | 40.0% | |
CTAATATGGAAATCAAGGCC+GGG | - | tig0014834:25138-25157 | None:intergenic | 40.0% | |
CCTAATATGGAAATCAAGGC+CGG | - | tig0014834:25139-25158 | None:intergenic | 40.0% | |
!! | TTTTGGGTATTGTGTGTGCA+AGG | - | tig0014834:25302-25321 | None:intergenic | 40.0% |
TCGGCAAATTACAACCAAGA+AGG | + | tig0014834:25422-25441 | Msa1355530:CDS | 40.0% | |
CGGCAAATTACAACCAAGAA+GGG | + | tig0014834:25423-25442 | Msa1355530:CDS | 40.0% | |
GGCAAATTACAACCAAGAAG+GGG | + | tig0014834:25424-25443 | Msa1355530:CDS | 40.0% | |
TGTATTAACGATGGGGATCA+TGG | + | tig0014834:25836-25855 | Msa1355530:CDS | 40.0% | |
AAGATACCCTAATGGCACAA+TGG | + | tig0014834:26156-26175 | Msa1355530:intron | 40.0% | |
AGATACCCTAATGGCACAAT+GGG | + | tig0014834:26157-26176 | Msa1355530:intron | 40.0% | |
TTGAAGTGAAGTGAATAGCG+AGG | - | tig0014834:26561-26580 | None:intergenic | 40.0% | |
! | GAGTGCCATTGAACTAATAG+GGG | - | tig0014834:26663-26682 | None:intergenic | 40.0% |
!! | GAGAGTGCCATTGAACTAAT+AGG | - | tig0014834:26665-26684 | None:intergenic | 40.0% |
! | CAACTGCCCCTTCATATTTT+AGG | + | tig0014834:26944-26963 | Msa1355530:intron | 40.0% |
ATCAACACGTAGCATACAGA+GGG | - | tig0014834:26984-27003 | None:intergenic | 40.0% | |
! | GACTAGCCATTTATATCTGC+AGG | + | tig0014834:27092-27111 | Msa1355530:intron | 40.0% |
!! | CTTCTTTTCTAGTCACGTGA+TGG | + | tig0014834:27155-27174 | Msa1355530:intron | 40.0% |
TAGGCATCCTATGCTTTCTT+TGG | + | tig0014834:27208-27227 | Msa1355530:intron | 40.0% | |
AATGCAAAACTGTGTACAGG+AGG | - | tig0014834:27384-27403 | None:intergenic | 40.0% | |
GTGAGAATGGAGAGAAAAGA+AGG | - | tig0014834:27655-27674 | None:intergenic | 40.0% | |
TGAGAGAGAAGGGATTCATT+GGG | - | tig0014834:27690-27709 | None:intergenic | 40.0% | |
!! | AGAGATTTGGTGAGAGAGAA+GGG | - | tig0014834:27700-27719 | None:intergenic | 40.0% |
!! | AAGAGATTTGGTGAGAGAGA+AGG | - | tig0014834:27701-27720 | None:intergenic | 40.0% |
TTCTCTCTCACCAAATCTCT+TGG | + | tig0014834:27700-27719 | Msa1355530:intron | 40.0% | |
CCAGATTTCTAATTGGACAG+CGG | - | tig0014834:27755-27774 | None:intergenic | 40.0% | |
TCGGTCACCAGATTTCTAAT+TGG | - | tig0014834:27762-27781 | None:intergenic | 40.0% | |
CCAGAAACCCAAACAAGAAT+AGG | - | tig0014834:27825-27844 | None:intergenic | 40.0% | |
! | CCTATTCTTGTTTGGGTTTC+TGG | + | tig0014834:27822-27841 | Msa1355530:intron | 40.0% |
! | ATTCTTGTTTGGGTTTCTGG+CGG | + | tig0014834:27825-27844 | Msa1355530:intron | 40.0% |
AAATACCACAATAGCCCTTC+CGG | + | tig0014834:27899-27918 | Msa1355530:intron | 40.0% | |
! | AGGAAGAAAGAAGGAAGCAT+CGG | + | tig0014834:27967-27986 | Msa1355530:intron | 40.0% |
!!! | GGGAACCATCGTTTTTTTTC+AGG | + | tig0014834:28061-28080 | Msa1355530:intron | 40.0% |
! | TTTCAGGCTTTCTAAGGACT+TGG | + | tig0014834:28077-28096 | Msa1355530:intron | 40.0% |
GACTTGGATCTTGAAGCAAA+TGG | + | tig0014834:28093-28112 | Msa1355530:intron | 40.0% | |
TTGACTACTTATCCTGCACA+GGG | + | tig0014834:28472-28491 | Msa1355530:intron | 40.0% | |
! | TACTGGGGAAAGCATATGTA+GGG | - | tig0014834:28534-28553 | None:intergenic | 40.0% |
! | ATACTGGGGAAAGCATATGT+AGG | - | tig0014834:28535-28554 | None:intergenic | 40.0% |
ATCAGTGATGTGTAAACCAG+TGG | - | tig0014834:28633-28652 | None:intergenic | 40.0% | |
GGGAACAAAATACAGTTGAG+TGG | - | tig0014834:28656-28675 | None:intergenic | 40.0% | |
CTAAGGAAACATTGAGCTTC+TGG | - | tig0014834:28722-28741 | None:intergenic | 40.0% | |
AGCTCAATGTTTCCTTAGAG+AGG | + | tig0014834:28724-28743 | Msa1355530:CDS | 40.0% | |
GCTCAATGTTTCCTTAGAGA+GGG | + | tig0014834:28725-28744 | Msa1355530:CDS | 40.0% | |
CTCAATGTTTCCTTAGAGAG+GGG | + | tig0014834:28726-28745 | Msa1355530:CDS | 40.0% | |
TATCATCTCCCTGAATCCAA+GGG | - | tig0014834:28788-28807 | None:intergenic | 40.0% | |
TTATCATCTCCCTGAATCCA+AGG | - | tig0014834:28789-28808 | None:intergenic | 40.0% | |
ATTGTTCATGGTAACCTGGA+TGG | + | tig0014834:28948-28967 | Msa1355530:CDS | 40.0% | |
TTCCCAGTGTAGTTAAACCA+AGG | + | tig0014834:29178-29197 | Msa1355530:intron | 40.0% | |
!!! | CGGTCCAGTTTTAATTACCT+TGG | - | tig0014834:29198-29217 | None:intergenic | 40.0% |
TAATTAAAACTGGACCGGAC+TGG | + | tig0014834:29201-29220 | Msa1355530:intron | 40.0% | |
! | TGACCTTTTGGACCAGATAT+AGG | - | tig0014834:29257-29276 | None:intergenic | 40.0% |
AAACCGCCCTATATAAGAAC+AGG | + | tig0014834:29280-29299 | Msa1355530:intron | 40.0% | |
AACCGCCCTATATAAGAACA+GGG | + | tig0014834:29281-29300 | Msa1355530:intron | 40.0% | |
GAGAAAGAAAGAAAGAGCAG+CGG | + | tig0014834:29606-29625 | Msa1355530:intron | 40.0% | |
GTCAACACATGCACTAGATT+CGG | + | tig0014834:29652-29671 | Msa1355530:intron | 40.0% | |
TCAACACATGCACTAGATTC+GGG | + | tig0014834:29653-29672 | Msa1355530:intron | 40.0% | |
!!! | CACACCCACTAGTTTTTATG+TGG | - | tig0014834:29896-29915 | None:intergenic | 40.0% |
GTTACAGGTTCAAGGTTCAA+AGG | - | tig0014834:30087-30106 | None:intergenic | 40.0% | |
CAAGGTAATCAAAATCGGAC+CGG | - | tig0014834:30126-30145 | None:intergenic | 40.0% | |
GATTACAACCTTGCAGTAAG+AGG | - | tig0014834:30338-30357 | None:intergenic | 40.0% | |
ACCAAGCAACGTATCATCAT+GGG | - | tig0014834:30459-30478 | None:intergenic | 40.0% | |
TACCAAGCAACGTATCATCA+TGG | - | tig0014834:30460-30479 | None:intergenic | 40.0% | |
TAAGGACAAACTGCAAAACC+AGG | - | tig0014834:30591-30610 | None:intergenic | 40.0% | |
GAAGTCCTTGTTCCATGTTA+AGG | - | tig0014834:30609-30628 | None:intergenic | 40.0% | |
GATAACCAATCAGGCAAAAG+AGG | - | tig0014834:30631-30650 | None:intergenic | 40.0% | |
CTAGTGAAGGATAACCAATC+AGG | - | tig0014834:30640-30659 | None:intergenic | 40.0% | |
! | CTGATTGGTTATCCTTCACT+AGG | + | tig0014834:30638-30657 | Msa1355530:CDS | 40.0% |
AGAGTAACTAGTACCATTGG+TGG | + | tig0014834:30754-30773 | Msa1355530:intron | 40.0% | |
CCAATGGCAAAAGCTTCATA+GGG | - | tig0014834:30896-30915 | None:intergenic | 40.0% | |
ACCAATGGCAAAAGCTTCAT+AGG | - | tig0014834:30897-30916 | None:intergenic | 40.0% | |
! | TATGAAGCTTTTGCCATTGG+TGG | + | tig0014834:30896-30915 | Msa1355530:CDS | 40.0% |
CACACTATTTGTTCCACCAA+TGG | - | tig0014834:30912-30931 | None:intergenic | 40.0% | |
TCTGGTCGATCATATGTTGT+TGG | + | tig0014834:30959-30978 | Msa1355530:CDS | 40.0% | |
!! | CGATCATATGTTGTTGGTTC+TGG | + | tig0014834:30965-30984 | Msa1355530:CDS | 40.0% |
TGGAGAAATCTCTTTCCCTA+TGG | + | tig0014834:30985-31004 | Msa1355530:CDS | 40.0% | |
TGTGTGATTTCTTAGTGGAG+AGG | + | tig0014834:31134-31153 | Msa1355530:intron | 40.0% | |
TCTGACTATGGAACTGATCT+TGG | + | tig0014834:31249-31268 | Msa1355530:CDS | 40.0% | |
TATGGAACTGATCTTGGATC+AGG | + | tig0014834:31255-31274 | Msa1355530:CDS | 40.0% | |
CAGTCCAAAAATACCTACCA+GGG | - | tig0014834:31290-31309 | None:intergenic | 40.0% | |
TCAGTCCAAAAATACCTACC+AGG | - | tig0014834:31291-31310 | None:intergenic | 40.0% | |
GCTAAATTGCCCACCTAAAT+TGG | - | tig0014834:31424-31443 | None:intergenic | 40.0% | |
! | TTTTTATTAGGTGACCCTGC+TGG | + | tig0014834:31854-31873 | Msa1355530:intron | 40.0% |
AATAAGCCTGGAAGTGGATA+TGG | + | tig0014834:31884-31903 | Msa1355530:CDS | 40.0% | |
ATAAGCCTGGAAGTGGATAT+GGG | + | tig0014834:31885-31904 | Msa1355530:CDS | 40.0% | |
AAGTGGATATGGGTATGGTT+TGG | + | tig0014834:31895-31914 | Msa1355530:CDS | 40.0% | |
AGTGGATATGGGTATGGTTT+GGG | + | tig0014834:31896-31915 | Msa1355530:CDS | 40.0% | |
!! | AAGAGGTTTCACTTTGGAGT+TGG | + | tig0014834:31983-32002 | Msa1355530:CDS | 40.0% |
TACAGGATATGCAAGGTTAG+TGG | + | tig0014834:32197-32216 | Msa1355530:intron | 40.0% | |
TATGCAAGGTTAGTGGAGAA+TGG | + | tig0014834:32204-32223 | Msa1355530:three_prime_UTR | 40.0% | |
GGATCATTTGAAGAGGAAGA+TGG | + | tig0014834:32253-32272 | Msa1355530:three_prime_UTR | 40.0% | |
! | GAAGATGGGGCATCAAAATA+GGG | + | tig0014834:32268-32287 | Msa1355530:three_prime_UTR | 40.0% |
! | TAGGGTTCTGACTTCTAAGT+AGG | + | tig0014834:32286-32305 | Msa1355530:three_prime_UTR | 40.0% |
! | AGGGTTCTGACTTCTAAGTA+GGG | + | tig0014834:32287-32306 | Msa1355530:three_prime_UTR | 40.0% |
TTGTCACGGTTCCCAACAAA+GGG | + | tig0014834:23331-23350 | Msa1355530:five_prime_UTR | 45.0% | |
GAAAGGAGAAACTCTCACCA+CGG | - | tig0014834:23464-23483 | None:intergenic | 45.0% | |
AACCGGGTTTAATATGGGCT+GGG | - | tig0014834:23519-23538 | None:intergenic | 45.0% | |
AAACCGGGTTTAATATGGGC+TGG | - | tig0014834:23520-23539 | None:intergenic | 45.0% | |
TTGGCAGTGTCAGACAAAAC+CGG | - | tig0014834:23536-23555 | None:intergenic | 45.0% | |
!!! | AGGGGAATTGTGTGTCGTTT+TGG | - | tig0014834:23671-23690 | None:intergenic | 45.0% |
!!! | CGTTTTGAGGCATTGTGAAG+GGG | - | tig0014834:23689-23708 | None:intergenic | 45.0% |
!!! | GTCGTTTTGAGGCATTGTGA+AGG | - | tig0014834:23691-23710 | None:intergenic | 45.0% |
!! | AAACGGATGTCGTCGTTTTG+AGG | - | tig0014834:23702-23721 | None:intergenic | 45.0% |
! | GTTTGGGTTTAGAAGGGAGA+GGG | - | tig0014834:23746-23765 | None:intergenic | 45.0% |
! | TGCTGGGTTTGGGTTTAGAA+GGG | - | tig0014834:23752-23771 | None:intergenic | 45.0% |
!! | AATGGTGAAGTGCTGGGTTT+GGG | - | tig0014834:23762-23781 | None:intergenic | 45.0% |
!!! | GGTTTTGAATGGTGAAGTGC+TGG | - | tig0014834:23769-23788 | None:intergenic | 45.0% |
AACGGAACGAGTTAACTGAG+TGG | - | tig0014834:23859-23878 | None:intergenic | 45.0% | |
GTTGAAAACGCGACAGAATG+AGG | + | tig0014834:23968-23987 | Msa1355530:CDS | 45.0% | |
GGTGAGAAATAAAGACGGTG+AGG | + | tig0014834:24016-24035 | Msa1355530:CDS | 45.0% | |
AAGACGGTGAGGAACTTGAA+CGG | + | tig0014834:24027-24046 | Msa1355530:CDS | 45.0% | |
CGAACAGTTAACGCCGAATT+AGG | - | tig0014834:24098-24117 | None:intergenic | 45.0% | |
TACGCGTGATGGTATTCGAT+TGG | + | tig0014834:24190-24209 | Msa1355530:CDS | 45.0% | |
CTCCTTCACATACCAATCCT+TGG | - | tig0014834:24580-24599 | None:intergenic | 45.0% | |
TACACTAGCAACATGTGCAC+TGG | - | tig0014834:24707-24726 | None:intergenic | 45.0% | |
ATTTACGTGGTAAGTTGCGC+AGG | + | tig0014834:24746-24765 | Msa1355530:intron | 45.0% | |
TTTACGTGGTAAGTTGCGCA+GGG | + | tig0014834:24747-24766 | Msa1355530:intron | 45.0% | |
CCGGCCTTGATTTCCATATT+AGG | + | tig0014834:25136-25155 | Msa1355530:intron | 45.0% | |
TCAGCTGTAGAGATTCTCTC+TGG | + | tig0014834:25161-25180 | Msa1355530:CDS | 45.0% | |
CAGCTGTAGAGATTCTCTCT+GGG | + | tig0014834:25162-25181 | Msa1355530:CDS | 45.0% | |
AGCTGTAGAGATTCTCTCTG+GGG | + | tig0014834:25163-25182 | Msa1355530:CDS | 45.0% | |
ATTACAAGTTTCAGAGGCCG+AGG | + | tig0014834:25196-25215 | Msa1355530:CDS | 45.0% | |
!! | AGGTTTTGTCTTCCCAACAG+TGG | - | tig0014834:25391-25410 | None:intergenic | 45.0% |
AATTACAACCAAGAAGGGGC+AGG | + | tig0014834:25428-25447 | Msa1355530:CDS | 45.0% | |
AAAAACTACCTGCCCCTTCT+TGG | - | tig0014834:25439-25458 | None:intergenic | 45.0% | |
!!! | GTAGTTTTTTGACCCAGCAC+TGG | + | tig0014834:25450-25469 | Msa1355530:intron | 45.0% |
! | ACGTGTCTTAGCTTGATTCG+CGG | - | tig0014834:25564-25583 | None:intergenic | 45.0% |
GATACCCTTTGGCAAGAGTT+AGG | - | tig0014834:26055-26074 | None:intergenic | 45.0% | |
AGAGGTTACTAGTGCTAACC+AGG | + | tig0014834:26454-26473 | Msa1355530:intron | 45.0% | |
TCAACACGTAGCATACAGAG+GGG | - | tig0014834:26983-27002 | None:intergenic | 45.0% | |
CATCAACACGTAGCATACAG+AGG | - | tig0014834:26985-27004 | None:intergenic | 45.0% | |
CTCTGTATGCTACGTGTTGA+TGG | + | tig0014834:26983-27002 | Msa1355530:intron | 45.0% | |
ATTACAAGTGGTCCACTCAG+AGG | + | tig0014834:27115-27134 | Msa1355530:CDS | 45.0% | |
GTATATGGAGCCAGTAACAG+AGG | - | tig0014834:27287-27306 | None:intergenic | 45.0% | |
AGTGTGCTTACAGCTACAAG+GGG | - | tig0014834:27360-27379 | None:intergenic | 45.0% | |
CAGTGTGCTTACAGCTACAA+GGG | - | tig0014834:27361-27380 | None:intergenic | 45.0% | |
TAAACGCACTCGCTAGAGTA+AGG | + | tig0014834:27586-27605 | Msa1355530:intron | 45.0% | |
AAACGCACTCGCTAGAGTAA+GGG | + | tig0014834:27587-27606 | Msa1355530:intron | 45.0% | |
AGAGAAGGGATTCATTGGGA+GGG | - | tig0014834:27686-27705 | None:intergenic | 45.0% | |
GTGAGAGAGAAGGGATTCAT+TGG | - | tig0014834:27691-27710 | None:intergenic | 45.0% | |
CTAAGTGCAGCCAAGAGATT+TGG | - | tig0014834:27713-27732 | None:intergenic | 45.0% | |
CAAATCTCTTGGCTGCACTT+AGG | + | tig0014834:27711-27730 | Msa1355530:intron | 45.0% | |
GATTTCTAATTGGACAGCGG+TGG | - | tig0014834:27752-27771 | None:intergenic | 45.0% | |
CCGCTGTCCAATTAGAAATC+TGG | + | tig0014834:27752-27771 | Msa1355530:intron | 45.0% | |
TCTTTCATCAAACGCCAGTG+CGG | - | tig0014834:27927-27946 | None:intergenic | 45.0% | |
TGGATATCGACACACATCAC+AGG | - | tig0014834:28419-28438 | None:intergenic | 45.0% | |
CTTGACTACTTATCCTGCAC+AGG | + | tig0014834:28471-28490 | Msa1355530:intron | 45.0% | |
AGAGTAGGCAAAGCTGCAAT+GGG | - | tig0014834:28676-28695 | None:intergenic | 45.0% | |
CACGAACGATTAAGTCAACC+TGG | - | tig0014834:28752-28771 | None:intergenic | 45.0% | |
TACACAGACCCTTGGATTCA+GGG | + | tig0014834:28777-28796 | Msa1355530:CDS | 45.0% | |
GGAGATGATAAGCGAACATC+TGG | + | tig0014834:28798-28817 | Msa1355530:CDS | 45.0% | |
ATTCTACACCACCTGTGATG+CGG | - | tig0014834:28995-29014 | None:intergenic | 45.0% | |
TAGAATTGAGTCGACCGATC+AGG | + | tig0014834:29009-29028 | Msa1355530:CDS | 45.0% | |
!! | AACAGCAGGACTGATTTTCC+AGG | + | tig0014834:29046-29065 | Msa1355530:CDS | 45.0% |
! | CCAGATATAGGTTTGGTTCG+CGG | - | tig0014834:29245-29264 | None:intergenic | 45.0% |
CTCCCTGTTCTTATATAGGG+CGG | - | tig0014834:29286-29305 | None:intergenic | 45.0% | |
GTTGAGCCAGTTTGAGAGTT+TGG | + | tig0014834:29357-29376 | Msa1355530:intron | 45.0% | |
TCAAGGTTCAAAGGTTGGAC+CGG | - | tig0014834:30078-30097 | None:intergenic | 45.0% | |
CAGGTTCAAGGTTCAAAGGT+TGG | - | tig0014834:30083-30102 | None:intergenic | 45.0% | |
CCTTGAACCTGTAACTACAC+CGG | + | tig0014834:30092-30111 | Msa1355530:intron | 45.0% | |
CATTGAACCGGTGTAGTTAC+AGG | - | tig0014834:30102-30121 | None:intergenic | 45.0% | |
!! | AACTACACCGGTTCAATGTC+CGG | + | tig0014834:30104-30123 | Msa1355530:intron | 45.0% |
TATCTATCACTTCAGCGTGC+CGG | + | tig0014834:30263-30282 | Msa1355530:intron | 45.0% | |
ACCATTGTTGTCACAGACTC+CGG | - | tig0014834:30285-30304 | None:intergenic | 45.0% | |
!! | GAGACTGTTTACACTGGTTC+CGG | + | tig0014834:30485-30504 | Msa1355530:CDS | 45.0% |
CATAGAAGACCCATGTTCAC+CGG | - | tig0014834:30507-30526 | None:intergenic | 45.0% | |
! | GACTTCCTCTTTTGCCTGAT+TGG | + | tig0014834:30623-30642 | Msa1355530:CDS | 45.0% |
CTTCACTAGGGTGAATGCAA+GGG | + | tig0014834:30651-30670 | Msa1355530:CDS | 45.0% | |
ACTAGTACCATTGGTGGAAC+TGG | + | tig0014834:30760-30779 | Msa1355530:intron | 45.0% | |
! | TAAAGCACCAGTTCCACCAA+TGG | - | tig0014834:30770-30789 | None:intergenic | 45.0% |
! | CCCTATGAAGCTTTTGCCAT+TGG | + | tig0014834:30893-30912 | Msa1355530:CDS | 45.0% |
GGTGGAACAAATAGTGTGAG+AGG | + | tig0014834:30914-30933 | Msa1355530:CDS | 45.0% | |
AGTGTGAGAGGCTATGAAGA+AGG | + | tig0014834:30926-30945 | Msa1355530:CDS | 45.0% | |
! | CTGTCCCTGGTAGGTATTTT+TGG | + | tig0014834:31283-31302 | Msa1355530:intron | 45.0% |
! | GCTTATTTCTTGCTCCAGCA+GGG | - | tig0014834:31871-31890 | None:intergenic | 45.0% |
GCAAGAAATAAGCCTGGAAG+TGG | + | tig0014834:31878-31897 | Msa1355530:CDS | 45.0% | |
! | GGAAGATGGGGCATCAAAAT+AGG | + | tig0014834:32267-32286 | Msa1355530:three_prime_UTR | 45.0% |
!! | TTTATTTAATTATAAACATT+TGG | + | tig0014834:28258-28277 | Msa1355530:intron | 5.0% |
!! | TATATTATTATATATTATGT+GGG | + | tig0014834:31825-31844 | Msa1355530:intron | 5.0% |
CTTGTCACGGTTCCCAACAA+AGG | + | tig0014834:23330-23349 | Msa1355530:five_prime_UTR | 50.0% | |
TGTCACGGTTCCCAACAAAG+GGG | + | tig0014834:23332-23351 | Msa1355530:five_prime_UTR | 50.0% | |
AGCCCAGCCCATATTAAACC+CGG | + | tig0014834:23514-23533 | Msa1355530:five_prime_UTR | 50.0% | |
TGGCAGTGTCAGACAAAACC+GGG | - | tig0014834:23535-23554 | None:intergenic | 50.0% | |
!!! | GTGTCGTTTTGGTGATGCTG+TGG | - | tig0014834:23660-23679 | None:intergenic | 50.0% |
! | GGTTTGGGTTTAGAAGGGAG+AGG | - | tig0014834:23747-23766 | None:intergenic | 50.0% |
! | GTGCTGGGTTTGGGTTTAGA+AGG | - | tig0014834:23753-23772 | None:intergenic | 50.0% |
!! | GAATGGTGAAGTGCTGGGTT+TGG | - | tig0014834:23763-23782 | None:intergenic | 50.0% |
CTGAGTGGAGTGAGTTGTGA+AGG | - | tig0014834:23844-23863 | None:intergenic | 50.0% | |
! | AAAGTGACGGCGATCGGTTT+GGG | - | tig0014834:23929-23948 | None:intergenic | 50.0% |
!! | ACAAGCTTTAAGCGCCTGAG+CGG | - | tig0014834:24072-24091 | None:intergenic | 50.0% |
TTCGGCGTTAACTGTTCGTG+AGG | + | tig0014834:24100-24119 | Msa1355530:CDS | 50.0% | |
TTGTTCGTGTGTTCCGGTTG+CGG | + | tig0014834:24163-24182 | Msa1355530:CDS | 50.0% | |
GCTGTAGAGATTCTCTCTGG+GGG | + | tig0014834:25164-25183 | Msa1355530:CDS | 50.0% | |
CAGGTCTACAGCATGCATCA+AGG | + | tig0014834:25795-25814 | Msa1355530:intron | 50.0% | |
AGCATTATTCCCCAACCAGC+AGG | + | tig0014834:25867-25886 | Msa1355530:CDS | 50.0% | |
! | GCTCTCCCATTGTGCCATTA+GGG | - | tig0014834:26165-26184 | None:intergenic | 50.0% |
! | AGCTCTCCCATTGTGCCATT+AGG | - | tig0014834:26166-26185 | None:intergenic | 50.0% |
! | AATGTGGTGGAACGTCCTAG+TGG | + | tig0014834:26737-26756 | Msa1355530:CDS | 50.0% |
CCAGCAGAAAATCCTCCACT+AGG | - | tig0014834:26755-26774 | None:intergenic | 50.0% | |
! | CCTAGTGGAGGATTTTCTGC+TGG | + | tig0014834:26752-26771 | Msa1355530:CDS | 50.0% |
! | AGTGGAGGATTTTCTGCTGG+TGG | + | tig0014834:26755-26774 | Msa1355530:CDS | 50.0% |
! | GAGGATTTTCTGCTGGTGGT+GGG | + | tig0014834:26759-26778 | Msa1355530:CDS | 50.0% |
!! | CTGGTGGTGGGATATCAAGT+GGG | + | tig0014834:26771-26790 | Msa1355530:CDS | 50.0% |
ATGAAGGGGCAGTTGTCTTG+TGG | - | tig0014834:26939-26958 | None:intergenic | 50.0% | |
CAACACGTAGCATACAGAGG+GGG | - | tig0014834:26982-27001 | None:intergenic | 50.0% | |
CTTCCAATGAGACCTCTGAG+TGG | - | tig0014834:27130-27149 | None:intergenic | 50.0% | |
CACTCAGAGGTCTCATTGGA+AGG | + | tig0014834:27128-27147 | Msa1355530:CDS | 50.0% | |
GCAGTGTGCTTACAGCTACA+AGG | - | tig0014834:27362-27381 | None:intergenic | 50.0% | |
AGAAGGGATTCATTGGGAGG+GGG | - | tig0014834:27684-27703 | None:intergenic | 50.0% | |
GAGAAGGGATTCATTGGGAG+GGG | - | tig0014834:27685-27704 | None:intergenic | 50.0% | |
GAGAGAAGGGATTCATTGGG+AGG | - | tig0014834:27687-27706 | None:intergenic | 50.0% | |
TGGCTGCACTTAGGTTTCAC+AGG | + | tig0014834:27720-27739 | Msa1355530:intron | 50.0% | |
AGAAATCTGGTGACCGACAG+CGG | + | tig0014834:27765-27784 | Msa1355530:intron | 50.0% | |
GCTATATCCATGCAGCTGCT+CGG | + | tig0014834:27847-27866 | Msa1355530:intron | 50.0% | |
GAGAGTAGGCAAAGCTGCAA+TGG | - | tig0014834:28677-28696 | None:intergenic | 50.0% | |
GTGCAAACTACACAGACCCT+TGG | + | tig0014834:28769-28788 | Msa1355530:CDS | 50.0% | |
CTACACAGACCCTTGGATTC+AGG | + | tig0014834:28776-28795 | Msa1355530:CDS | 50.0% | |
ACGCCCGGAACAATTGTTCA+TGG | + | tig0014834:28936-28955 | Msa1355530:CDS | 50.0% | |
TCAGGCTACTGTTACCATCC+AGG | - | tig0014834:28965-28984 | None:intergenic | 50.0% | |
GGTAACAGTAGCCTGACCAT+TGG | + | tig0014834:28969-28988 | Msa1355530:CDS | 50.0% | |
CCGCGAACCAAACCTATATC+TGG | + | tig0014834:29242-29261 | Msa1355530:intron | 50.0% | |
! | GGGCGGTTTTCATGACCTTT+TGG | - | tig0014834:29269-29288 | None:intergenic | 50.0% |
CAGGGAGAAAACCGGTAAAC+CGG | + | tig0014834:29299-29318 | Msa1355530:intron | 50.0% | |
AGGGAGAAAACCGGTAAACC+GGG | + | tig0014834:29300-29319 | Msa1355530:intron | 50.0% | |
! | CTCAAACTGGCTCAACCAAC+CGG | - | tig0014834:29353-29372 | None:intergenic | 50.0% |
CACGGTCCAAACTCTCAAAC+TGG | - | tig0014834:29366-29385 | None:intergenic | 50.0% | |
! | CAACAAAGGGGAAGTGTGTG+TGG | - | tig0014834:29438-29457 | None:intergenic | 50.0% |
CACACACTTCCCCTTTGTTG+TGG | + | tig0014834:29438-29457 | Msa1355530:intron | 50.0% | |
CCGGTGTAGTTACAGGTTCA+AGG | - | tig0014834:30095-30114 | None:intergenic | 50.0% | |
AATCGGACCGGACATTGAAC+CGG | - | tig0014834:30114-30133 | None:intergenic | 50.0% | |
ACAACAGCCCTCTTACTGCA+AGG | + | tig0014834:30327-30346 | Msa1355530:CDS | 50.0% | |
! | TCATGGGCATTGCCACTACA+AGG | - | tig0014834:30443-30462 | None:intergenic | 50.0% |
GCCCATGATGATACGTTGCT+TGG | + | tig0014834:30455-30474 | Msa1355530:CDS | 50.0% | |
!! | TACACTGGTTCCGGTGAACA+TGG | + | tig0014834:30494-30513 | Msa1355530:CDS | 50.0% |
!! | ACACTGGTTCCGGTGAACAT+GGG | + | tig0014834:30495-30514 | Msa1355530:CDS | 50.0% |
CGGTGAACATGGGTCTTCTA+TGG | + | tig0014834:30505-30524 | Msa1355530:CDS | 50.0% | |
CCTTGCATTCACCCTAGTGA+AGG | - | tig0014834:30653-30672 | None:intergenic | 50.0% | |
CCTTCACTAGGGTGAATGCA+AGG | + | tig0014834:30650-30669 | Msa1355530:CDS | 50.0% | |
GTGAATGCAAGGGCTAGGAA+GGG | + | tig0014834:30661-30680 | Msa1355530:CDS | 50.0% | |
!! | GCTAGGAAGGGTGTTGAGAT+AGG | + | tig0014834:30673-30692 | Msa1355530:CDS | 50.0% |
TGGTAAACTGCCAGTCTCTC+TGG | + | tig0014834:30845-30864 | Msa1355530:intron | 50.0% | |
TAAACTGCCAGTCTCTCTGG+TGG | + | tig0014834:30848-30867 | Msa1355530:intron | 50.0% | |
GTGAGAGGCTATGAAGAAGG+CGG | + | tig0014834:30929-30948 | Msa1355530:CDS | 50.0% | |
GACAAGCACTTGCTTCAACC+TGG | + | tig0014834:31086-31105 | Msa1355530:intron | 50.0% | |
TGATCCTTACCCACTTGGGT+TGG | + | tig0014834:31328-31347 | Msa1355530:intron | 50.0% | |
!! | GTGGTATTGGCTTGGGTCTT+GGG | + | tig0014834:31355-31374 | Msa1355530:intron | 50.0% |
GAATCGAACCTGAGACCTTG+CGG | - | tig0014834:31392-31411 | None:intergenic | 50.0% | |
GTCTCAGGTTCGATTCTCTC+CGG | + | tig0014834:31396-31415 | Msa1355530:intron | 50.0% | |
ATTCTCTCCGGCGCCAATTT+AGG | + | tig0014834:31408-31427 | Msa1355530:intron | 50.0% | |
TGAATGGCACTCGTGCATCT+GGG | - | tig0014834:31503-31522 | None:intergenic | 50.0% | |
TTGAATGGCACTCGTGCATC+TGG | - | tig0014834:31504-31523 | None:intergenic | 50.0% | |
! | GGCTTATTTCTTGCTCCAGC+AGG | - | tig0014834:31872-31891 | None:intergenic | 50.0% |
GCTGGAGCAAGAAATAAGCC+TGG | + | tig0014834:31872-31891 | Msa1355530:CDS | 50.0% | |
CCATACCCATATCCACTTCC+AGG | - | tig0014834:31893-31912 | None:intergenic | 50.0% | |
CCTGGAAGTGGATATGGGTA+TGG | + | tig0014834:31890-31909 | Msa1355530:CDS | 50.0% | |
ATCCGTGTGGATTCGCCTTT+GGG | + | tig0014834:31920-31939 | Msa1355530:CDS | 50.0% | |
TCAAGACGCAAAGGACCCAA+AGG | - | tig0014834:31938-31957 | None:intergenic | 50.0% | |
GAAATGACTCAGAGCACGGC+GGG | - | tig0014834:23414-23433 | None:intergenic | 55.0% | |
GGAAATGACTCAGAGCACGG+CGG | - | tig0014834:23415-23434 | None:intergenic | 55.0% | |
! | GCCGTGCTCTGAGTCATTTC+CGG | + | tig0014834:23414-23433 | Msa1355530:five_prime_UTR | 55.0% |
GCCGGAAATGACTCAGAGCA+CGG | - | tig0014834:23418-23437 | None:intergenic | 55.0% | |
TAAGCTTGTGCTGTGGTGGC+CGG | - | tig0014834:23436-23455 | None:intergenic | 55.0% | |
GGAGTAAGCTTGTGCTGTGG+TGG | - | tig0014834:23440-23459 | None:intergenic | 55.0% | |
AGGAGAAACTCTCACCACGG+CGG | - | tig0014834:23461-23480 | None:intergenic | 55.0% | |
TCGTTAACCGCTCGTGCGTT+TGG | - | tig0014834:23555-23574 | None:intergenic | 55.0% | |
!! | AAGTGACGGCGATCGGTTTG+GGG | - | tig0014834:23928-23947 | None:intergenic | 55.0% |
GAAAGTGACGGCGATCGGTT+TGG | - | tig0014834:23930-23949 | None:intergenic | 55.0% | |
CGGTGAGGAACTTGAACGGA+AGG | + | tig0014834:24031-24050 | Msa1355530:CDS | 55.0% | |
TTTAAGCGCCTGAGCGGCTT+CGG | - | tig0014834:24066-24085 | None:intergenic | 55.0% | |
TCACGCGTATCAACCGCAAC+CGG | - | tig0014834:24179-24198 | None:intergenic | 55.0% | |
! | GTTGCGGTTGATACGCGTGA+TGG | + | tig0014834:24179-24198 | Msa1355530:CDS | 55.0% |
! | GGAGCGTGGTCTTTTTGCCA+TGG | + | tig0014834:24829-24848 | Msa1355530:CDS | 55.0% |
TGTAGGGGTGAGACCACTGT+TGG | + | tig0014834:25375-25394 | Msa1355530:intron | 55.0% | |
GTAGGGGTGAGACCACTGTT+GGG | + | tig0014834:25376-25395 | Msa1355530:intron | 55.0% | |
! | GGAGGATTTTCTGCTGGTGG+TGG | + | tig0014834:26758-26777 | Msa1355530:CDS | 55.0% |
!! | GCTGGTGGTGGGATATCAAG+TGG | + | tig0014834:26770-26789 | Msa1355530:CDS | 55.0% |
GGTCCACTCAGAGGTCTCAT+TGG | + | tig0014834:27124-27143 | Msa1355530:CDS | 55.0% | |
GAGGGGGTGGAAAGTGAGAA+TGG | - | tig0014834:27668-27687 | None:intergenic | 55.0% | |
AAACACATGCAGCCCTGTGC+AGG | - | tig0014834:28487-28506 | None:intergenic | 55.0% | |
TGTTTCCTTAGAGAGGGGCC+AGG | + | tig0014834:28731-28750 | Msa1355530:CDS | 55.0% | |
CCACTCCACTTTGGCCTGAT+CGG | - | tig0014834:29026-29045 | None:intergenic | 55.0% | |
CCTGCTGTTCCACTCCACTT+TGG | - | tig0014834:29035-29054 | None:intergenic | 55.0% | |
CCAAAGTGGAGTGGAACAGC+AGG | + | tig0014834:29032-29051 | Msa1355530:CDS | 55.0% | |
!! | TAAAACTGGACCGGACTGGC+CGG | + | tig0014834:29205-29224 | Msa1355530:intron | 55.0% |
! | ACTGGCCGGTTCAACCAGTT+GGG | + | tig0014834:29219-29238 | Msa1355530:intron | 55.0% |
GAAGTGTGTGTGGTTGCTGG+TGG | - | tig0014834:29428-29447 | None:intergenic | 55.0% | |
GCCGGAGTCTGTGACAACAA+TGG | + | tig0014834:30281-30300 | Msa1355530:CDS | 55.0% | |
CTAGGGTGAATGCAAGGGCT+AGG | + | tig0014834:30656-30675 | Msa1355530:CDS | 55.0% | |
GGTGAATGCAAGGGCTAGGA+AGG | + | tig0014834:30660-30679 | Msa1355530:CDS | 55.0% | |
CACATGACCACCAGAGAGAC+TGG | - | tig0014834:30858-30877 | None:intergenic | 55.0% | |
CAGTCTCTCTGGTGGTCATG+TGG | + | tig0014834:30856-30875 | Msa1355530:intron | 55.0% | |
CTCTCTGGTGGTCATGTGGT+AGG | + | tig0014834:30860-30879 | Msa1355530:CDS | 55.0% | |
AGGCTATGAAGAAGGCGGTG+TGG | + | tig0014834:30934-30953 | Msa1355530:CDS | 55.0% | |
GGCTATGAAGAAGGCGGTGT+GGG | + | tig0014834:30935-30954 | Msa1355530:CDS | 55.0% | |
!! | TTGGGTTGGCCTGGTGGTAT+TGG | + | tig0014834:31342-31361 | Msa1355530:intron | 55.0% |
!! | TTGGCCTGGTGGTATTGGCT+TGG | + | tig0014834:31347-31366 | Msa1355530:intron | 55.0% |
!! | TGGCCTGGTGGTATTGGCTT+GGG | + | tig0014834:31348-31367 | Msa1355530:intron | 55.0% |
AGACCCAAGCCAATACCACC+AGG | - | tig0014834:31354-31373 | None:intergenic | 55.0% | |
!! | GGTGGTATTGGCTTGGGTCT+TGG | + | tig0014834:31354-31373 | Msa1355530:intron | 55.0% |
TCTCCGGCGCCAATTTAGGT+GGG | + | tig0014834:31412-31431 | Msa1355530:intron | 55.0% | |
TTGCCCACCTAAATTGGCGC+CGG | - | tig0014834:31418-31437 | None:intergenic | 55.0% | |
! | GTATGGTTTGGGCATCCGTG+TGG | + | tig0014834:31907-31926 | Msa1355530:CDS | 55.0% |
CATCCGTGTGGATTCGCCTT+TGG | + | tig0014834:31919-31938 | Msa1355530:CDS | 55.0% | |
GACCCAAAGGCGAATCCACA+CGG | - | tig0014834:31925-31944 | None:intergenic | 55.0% | |
GGCGGAGTAAGCTTGTGCTG+TGG | - | tig0014834:23443-23462 | None:intergenic | 60.0% | |
AGCACAAGCTTACTCCGCCG+TGG | + | tig0014834:23444-23463 | Msa1355530:five_prime_UTR | 60.0% | |
GACACTGCCAAACGCACGAG+CGG | + | tig0014834:23545-23564 | Msa1355530:five_prime_UTR | 60.0% | |
GGCGGTGAGGGATAACGATG+CGG | - | tig0014834:23907-23926 | None:intergenic | 60.0% | |
CCGACGAAAGTGACGGCGAT+CGG | - | tig0014834:23935-23954 | None:intergenic | 60.0% | |
! | CCGATCGCCGTCACTTTCGT+CGG | + | tig0014834:23932-23951 | Msa1355530:CDS | 60.0% |
! | ATCGCCGTCACTTTCGTCGG+CGG | + | tig0014834:23935-23954 | Msa1355530:CDS | 60.0% |
TCCTCCGCCGACGAAAGTGA+CGG | - | tig0014834:23942-23961 | None:intergenic | 60.0% | |
TCTAGAAGCCGAAGCCGCTC+AGG | + | tig0014834:24055-24074 | Msa1355530:CDS | 60.0% | |
GGGGAGAGAGAGAGAGAGAG+AGG | - | tig0014834:24664-24683 | None:intergenic | 60.0% | |
! | GTGGTGGAACGTCCTAGTGG+AGG | + | tig0014834:26740-26759 | Msa1355530:CDS | 60.0% |
AGGGATTCATTGGGAGGGGG+TGG | - | tig0014834:27681-27700 | None:intergenic | 60.0% | |
GGAGTTGTGGACACCGCTGT+CGG | - | tig0014834:27781-27800 | None:intergenic | 60.0% | |
TGCGATTCCGAGCAGCTGCA+TGG | - | tig0014834:27857-27876 | None:intergenic | 60.0% | |
ATCAAACGCCAGTGCGGAGC+CGG | - | tig0014834:27921-27940 | None:intergenic | 60.0% | |
GCGAATGGTCGAACTGCCAC+TGG | + | tig0014834:28614-28633 | Msa1355530:intron | 60.0% | |
GTCAACCTGGCCCCTCTCTA+AGG | - | tig0014834:28739-28758 | None:intergenic | 60.0% | |
CTGTGATGCGGCCAATGGTC+AGG | - | tig0014834:28983-29002 | None:intergenic | 60.0% | |
CTGACCATTGGCCGCATCAC+AGG | + | tig0014834:28981-29000 | Msa1355530:CDS | 60.0% | |
ACCATTGGCCGCATCACAGG+TGG | + | tig0014834:28984-29003 | Msa1355530:CDS | 60.0% | |
ACCACCTGTGATGCGGCCAA+TGG | - | tig0014834:28988-29007 | None:intergenic | 60.0% | |
GTCGACCGATCAGGCCAAAG+TGG | + | tig0014834:29018-29037 | Msa1355530:CDS | 60.0% | |
CCGATCAGGCCAAAGTGGAG+TGG | + | tig0014834:29023-29042 | Msa1355530:CDS | 60.0% | |
ACTGGTTGAACCGGCCAGTC+CGG | - | tig0014834:29218-29237 | None:intergenic | 60.0% | |
! | GACTGGCCGGTTCAACCAGT+TGG | + | tig0014834:29218-29237 | Msa1355530:intron | 60.0% |
CCGGTTCTTGCCCGGTTTAC+CGG | - | tig0014834:29313-29332 | None:intergenic | 60.0% | |
CCGGTAAACCGGGCAAGAAC+CGG | + | tig0014834:29310-29329 | Msa1355530:intron | 60.0% | |
CGGTAAACCGGGCAAGAACC+GGG | + | tig0014834:29311-29330 | Msa1355530:intron | 60.0% | |
! | CGGTTTTCCCGGTTCTTGCC+CGG | - | tig0014834:29321-29340 | None:intergenic | 60.0% |
CGGGCAAGAACCGGGAAAAC+CGG | + | tig0014834:29319-29338 | Msa1355530:intron | 60.0% | |
GCAAGAACCGGGAAAACCGG+CGG | + | tig0014834:29322-29341 | Msa1355530:intron | 60.0% | |
GTGTGTGTGGTTGCTGGTGG+TGG | - | tig0014834:29425-29444 | None:intergenic | 60.0% | |
! | GGGGAAGTGTGTGTGGTTGC+TGG | - | tig0014834:29431-29450 | None:intergenic | 60.0% |
CAGGCCAACCCAAGTGGGTA+AGG | - | tig0014834:31335-31354 | None:intergenic | 60.0% | |
!! | CTTACCCACTTGGGTTGGCC+TGG | + | tig0014834:31333-31352 | Msa1355530:intron | 60.0% |
ACCACCAGGCCAACCCAAGT+GGG | - | tig0014834:31340-31359 | None:intergenic | 60.0% | |
TACCACCAGGCCAACCCAAG+TGG | - | tig0014834:31341-31360 | None:intergenic | 60.0% | |
TCGAACCTGAGACCTTGCGG+AGG | - | tig0014834:31389-31408 | None:intergenic | 60.0% | |
CTCTCCGGCGCCAATTTAGG+TGG | + | tig0014834:31411-31430 | Msa1355530:intron | 60.0% | |
ACTCAGAGCACGGCGGGTCT+GGG | - | tig0014834:23408-23427 | None:intergenic | 65.0% | |
!! | CGATCGGTTTGGGGCGGTGA+GGG | - | tig0014834:23919-23938 | None:intergenic | 65.0% |
!! | TGACGGCGATCGGTTTGGGG+CGG | - | tig0014834:23925-23944 | None:intergenic | 65.0% |
CGGAGCCGGAAGGGCTATTG+TGG | - | tig0014834:27907-27926 | None:intergenic | 65.0% | |
CGCGGCCCAACTGGTTGAAC+CGG | - | tig0014834:29227-29246 | None:intergenic | 65.0% | |
! | GGTTTGGTTCGCGGCCCAAC+TGG | - | tig0014834:29236-29255 | None:intergenic | 65.0% |
!!! | GGCTCAACCGCCGGTTTTCC+CGG | - | tig0014834:29332-29351 | None:intergenic | 65.0% |
GGGAAAACCGGCGGTTGAGC+CGG | + | tig0014834:29331-29350 | Msa1355530:intron | 65.0% | |
AAACCGGCGGTTGAGCCGGT+TGG | + | tig0014834:29335-29354 | Msa1355530:intron | 65.0% | |
! | CAACCAACCGGCTCAACCGC+CGG | - | tig0014834:29341-29360 | None:intergenic | 65.0% |
GAAGAAGGCGGTGTGGGCTC+TGG | + | tig0014834:30941-30960 | Msa1355530:CDS | 65.0% | |
GGATCAGGCTCGACTGTCCC+TGG | + | tig0014834:31270-31289 | Msa1355530:CDS | 65.0% | |
CAGGCTCGACTGTCCCTGGT+AGG | + | tig0014834:31274-31293 | Msa1355530:intron | 65.0% | |
!! | ACCCACTTGGGTTGGCCTGG+TGG | + | tig0014834:31336-31355 | Msa1355530:intron | 65.0% |
! | TGGGAGTGTGCTCCTCCGCA+AGG | + | tig0014834:31374-31393 | Msa1355530:intron | 65.0% |
GTGCTCCTCCGCAAGGTCTC+AGG | + | tig0014834:31381-31400 | Msa1355530:intron | 65.0% | |
CACGGCGGGTCTGGGGGATA+GGG | - | tig0014834:23400-23419 | None:intergenic | 70.0% | |
TCAGAGCACGGCGGGTCTGG+GGG | - | tig0014834:23406-23425 | None:intergenic | 70.0% | |
CTCAGAGCACGGCGGGTCTG+GGG | - | tig0014834:23407-23426 | None:intergenic | 70.0% | |
GACTCAGAGCACGGCGGGTC+TGG | - | tig0014834:23409-23428 | None:intergenic | 70.0% | |
!! | GCGATCGGTTTGGGGCGGTG+AGG | - | tig0014834:23920-23939 | None:intergenic | 70.0% |
! | GCCGTCACTTTCGTCGGCGG+AGG | + | tig0014834:23938-23957 | Msa1355530:CDS | 70.0% |
TAGCCCTTCCGGCTCCGCAC+TGG | + | tig0014834:27910-27929 | Msa1355530:intron | 70.0% | |
ACGCCAGTGCGGAGCCGGAA+GGG | - | tig0014834:27916-27935 | None:intergenic | 70.0% | |
AACGCCAGTGCGGAGCCGGA+AGG | - | tig0014834:27917-27936 | None:intergenic | 70.0% | |
GCACGGCGGGTCTGGGGGAT+AGG | - | tig0014834:23401-23420 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0014834 | gene | 23319 | 32462 | 23319 | ID=Msa1355530;Name=Msa1355530 |
tig0014834 | mRNA | 23319 | 32462 | 23319 | ID=Msa1355530-mRNA-1;Parent=Msa1355530;Name=Msa1355530-mRNA-1;_AED=0.09;_eAED=0.09;_QI=377|1|1|1|0.93|0.88|17|263|670 |
tig0014834 | exon | 23319 | 24220 | 23319 | ID=Msa1355530-mRNA-1:exon:9486;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 24557 | 24650 | 24557 | ID=Msa1355530-mRNA-1:exon:9487;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 24768 | 24850 | 24768 | ID=Msa1355530-mRNA-1:exon:9488;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 25158 | 25255 | 25158 | ID=Msa1355530-mRNA-1:exon:9489;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 25380 | 25449 | 25380 | ID=Msa1355530-mRNA-1:exon:9490;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 25798 | 25888 | 25798 | ID=Msa1355530-mRNA-1:exon:9491;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 26711 | 26792 | 26711 | ID=Msa1355530-mRNA-1:exon:9492;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 27114 | 27149 | 27114 | ID=Msa1355530-mRNA-1:exon:9493;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 28683 | 28836 | 28683 | ID=Msa1355530-mRNA-1:exon:9494;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 28927 | 29067 | 28927 | ID=Msa1355530-mRNA-1:exon:9495;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 30278 | 30348 | 30278 | ID=Msa1355530-mRNA-1:exon:9496;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 30448 | 30526 | 30448 | ID=Msa1355530-mRNA-1:exon:9497;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 30601 | 30716 | 30601 | ID=Msa1355530-mRNA-1:exon:9498;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 30859 | 31006 | 30859 | ID=Msa1355530-mRNA-1:exon:9499;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 31222 | 31291 | 31222 | ID=Msa1355530-mRNA-1:exon:9500;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 31864 | 32020 | 31864 | ID=Msa1355530-mRNA-1:exon:9501;Parent=Msa1355530-mRNA-1 |
tig0014834 | exon | 32202 | 32462 | 32202 | ID=Msa1355530-mRNA-1:exon:9502;Parent=Msa1355530-mRNA-1 |
tig0014834 | five_prime_UTR | 23319 | 23695 | 23319 | ID=Msa1355530-mRNA-1:five_prime_utr;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 23696 | 24220 | 23696 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 24557 | 24650 | 24557 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 24768 | 24850 | 24768 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 25158 | 25255 | 25158 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 25380 | 25449 | 25380 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 25798 | 25888 | 25798 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 26711 | 26792 | 26711 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 27114 | 27149 | 27114 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 28683 | 28836 | 28683 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 28927 | 29067 | 28927 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 30278 | 30348 | 30278 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 30448 | 30526 | 30448 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 30601 | 30716 | 30601 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 30859 | 31006 | 30859 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 31222 | 31291 | 31222 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | CDS | 31864 | 32018 | 31864 | ID=Msa1355530-mRNA-1:cds;Parent=Msa1355530-mRNA-1 |
tig0014834 | three_prime_UTR | 32019 | 32020 | 32019 | ID=Msa1355530-mRNA-1:three_prime_utr;Parent=Msa1355530-mRNA-1 |
tig0014834 | three_prime_UTR | 32202 | 32462 | 32202 | ID=Msa1355530-mRNA-1:three_prime_utr;Parent=Msa1355530-mRNA-1 |
Gene Sequence |
Protein sequence |