AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358020 MtrunA17_Chr7g0274481 92.000 725 28 2 4 704 8 726 0.0 1275
Msa1358020 MtrunA17_Chr5g0397691 93.831 616 25 3 1 612 1 607 0.0 1083
Msa1358020 MtrunA17_Chr5g0397681 87.500 40 5 0 631 670 1 40 4.60e-17 75.9
Msa1358020 MtrunA17_Chr7g0238631 36.364 110 64 2 4 112 62 166 3.75e-13 72.8
Msa1358020 MtrunA17_Chr8g0362231 32.353 102 64 1 3 104 22 118 1.33e-11 67.4
Msa1358020 MtrunA17_Chr3g0139671 38.462 78 48 0 4 81 86 163 1.53e-11 68.2
Msa1358020 MtrunA17_Chr3g0139671 32.727 110 68 2 4 112 34 138 6.54e-11 65.9
Msa1358020 MtrunA17_Chr6g0460661 40.789 76 45 0 6 81 19 94 3.85e-11 62.0
Msa1358020 MtrunA17_Chr5g0416341 32.456 114 68 2 3 116 26 130 4.37e-11 65.9
Msa1358020 MtrunA17_Chr1g0157731 32.727 110 68 2 4 112 40 144 4.46e-11 66.6
Msa1358020 MtrunA17_Chr6g0460671 38.961 77 47 0 4 80 100 176 6.05e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358020 AT1G09770.1 73.590 727 157 5 4 703 8 726 0.0 1018
Msa1358020 AT3G18100.1 35.294 102 59 2 4 104 547 642 1.11e-13 75.5
Msa1358020 AT3G18100.1 33.663 101 62 2 6 106 498 593 2.37e-11 67.8
Msa1358020 AT3G18100.3 35.294 102 59 2 4 104 499 594 1.77e-13 74.7
Msa1358020 AT3G18100.3 33.663 101 62 2 6 106 450 545 4.27e-11 67.0
Msa1358020 AT3G18100.4 35.294 102 59 2 4 104 386 481 2.11e-13 74.3
Msa1358020 AT3G18100.4 33.663 101 62 2 6 106 337 432 5.57e-11 66.2
Msa1358020 AT3G18100.2 35.294 102 59 2 4 104 334 429 2.89e-13 73.6
Msa1358020 AT3G18100.2 33.663 101 62 2 6 106 285 380 8.28e-11 65.9
Msa1358020 AT5G02320.1 34.862 109 67 1 4 112 76 180 3.12e-13 73.6
Msa1358020 AT5G02320.2 34.862 109 67 1 4 112 76 180 3.12e-13 73.6
Msa1358020 AT5G02320.3 34.862 109 67 1 4 112 16 120 3.45e-13 73.2
Msa1358020 AT5G11510.3 35.455 110 65 2 4 112 30 134 2.65e-12 70.9
Msa1358020 AT5G11510.1 35.455 110 65 2 4 112 30 134 2.65e-12 70.9
Msa1358020 AT5G11510.4 35.455 110 65 2 4 112 30 134 2.65e-12 70.9
Msa1358020 AT5G11510.2 35.455 110 65 2 4 112 30 134 5.48e-12 69.7
Msa1358020 AT5G11510.5 35.455 110 65 2 4 112 30 134 6.78e-12 69.3
Msa1358020 AT3G09370.2 34.545 110 66 2 4 112 84 188 1.09e-11 68.2
Msa1358020 AT3G09370.1 34.545 110 66 2 4 112 79 183 1.30e-11 68.2
Msa1358020 AT4G18770.1 38.889 90 50 1 4 93 218 302 1.41e-11 67.8
Msa1358020 AT3G09370.3 34.545 110 66 2 4 112 92 196 1.63e-11 67.8
Msa1358020 AT4G33450.1 38.462 78 48 0 4 81 20 97 2.16e-11 65.1
Msa1358020 AT2G02820.2 30.159 126 69 2 3 114 30 150 5.40e-11 66.2
Msa1358020 AT2G02820.1 30.159 126 69 2 3 114 30 150 7.94e-11 65.5
Msa1358020 AT4G32730.5 32.727 110 68 2 4 112 36 140 8.46e-11 66.2
Msa1358020 AT4G32730.4 32.727 110 68 2 4 112 36 140 8.46e-11 66.2
Msa1358020 AT4G32730.3 32.727 110 68 2 4 112 36 140 8.46e-11 66.2
Msa1358020 AT4G32730.2 32.727 110 68 2 4 112 36 140 8.46e-11 66.2
Msa1358020 AT5G17800.1 40.000 80 48 0 2 81 92 171 9.87e-11 64.3

Find 238 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTCTTTCTAACTGTTTC+TGG 0.038877 tig0016220:+160775 None:intergenic
CTGTTGCAATTGTTGATTTA+TGG 0.112818 tig0016220:-158673 Msa1358020:three_prime_UTR
TTCTGGGTCATTCAGCTTCT+TGG 0.153986 tig0016220:+160792 None:intergenic
TTTCTTTCAATTATTGTTAA+TGG 0.166886 tig0016220:-158813 Msa1358020:three_prime_UTR
TGCCGGCGCCATACCACTTC+TGG 0.177175 tig0016220:+160360 None:intergenic
CCAAACACCTATGCTCATTT+TGG 0.182921 tig0016220:+161641 None:intergenic
ATTTCATAACAGCAGCTTTC+AGG 0.225007 tig0016220:+161598 None:intergenic
CCGCATCTCTGGAGCTTATT+AGG 0.229145 tig0016220:-159991 Msa1358020:CDS
GGAGTAAGGCCTGCACTTCC+AGG 0.240853 tig0016220:+160382 None:intergenic
TTGGGTGTCTGTGGATAATT+AGG 0.241982 tig0016220:+160622 None:intergenic
CATGATGGAAGCTGAAAATT+TGG 0.248037 tig0016220:-160539 Msa1358020:CDS
GTTCTCTGAGGAGTTCTTAA+AGG 0.283026 tig0016220:+160586 None:intergenic
AAAGCTGCTGTTATGAAATA+TGG 0.287568 tig0016220:-161594 Msa1358020:CDS
GAATTGGTTGCATCACTATC+TGG 0.302904 tig0016220:+160161 None:intergenic
AAAGGAGCTTCTAGCCTTAC+TGG 0.309592 tig0016220:-159888 Msa1358020:CDS
GGTCGCGCAGGCTTCGATTC+AGG 0.310060 tig0016220:+161240 None:intergenic
CCCTGTCATAGAAGATTATC+AGG 0.315605 tig0016220:-159777 Msa1358020:CDS
ATGGATCTCAACTAATTAGT+AGG 0.316459 tig0016220:-158654 Msa1358020:three_prime_UTR
TGGGGTCACTCCTAAGAAAA+AGG 0.319124 tig0016220:-160446 Msa1358020:CDS
AGTCCACTCAGCCTTCTTAA+TGG 0.323636 tig0016220:+161482 None:intergenic
TCTTCAGCATCTTCTTGAAT+TGG 0.331097 tig0016220:+160145 None:intergenic
GTTTGAGAAGAGGCCTCCTC+TGG 0.334561 tig0016220:-160989 Msa1358020:CDS
CCATTGCCTCACGAAGATAC+TGG 0.334884 tig0016220:+159050 None:intergenic
ACCGTGAAACCAAACCAAAA+AGG 0.338245 tig0016220:-162299 Msa1358020:five_prime_UTR
ATCTCGTCGGCTTGCTCAAT+AGG 0.342238 tig0016220:+159917 None:intergenic
TCAAGTTCTTCTATAGTAGT+AGG 0.344179 tig0016220:+160916 None:intergenic
TAGGCCTCCTCCCGCATCTC+TGG 0.353111 tig0016220:-160002 Msa1358020:CDS
CTCCGAAGGGAACTCCTCTC+AGG 0.358383 tig0016220:-160312 Msa1358020:CDS
TTTGTAGTTGTCTAGTTCCT+TGG 0.368196 tig0016220:-158785 Msa1358020:three_prime_UTR
GCTTGAGGAGATAGCAAATA+AGG 0.373696 tig0016220:-159843 Msa1358020:CDS
CCAAAATGAGCATAGGTGTT+TGG 0.385146 tig0016220:-161641 Msa1358020:exon
TCTCGTCGGCTTGCTCAATA+GGG 0.387795 tig0016220:+159918 None:intergenic
AGGCCCATTTGCTGCTCGTT+TGG 0.388358 tig0016220:+159805 None:intergenic
TCAGATTTCCGATCAAGAAT+TGG 0.389053 tig0016220:-160731 Msa1358020:CDS
ATCTCTTTCTAACTGTTTCT+GGG 0.390771 tig0016220:+160776 None:intergenic
GCAGGCTTCGATTCAGGATT+CGG 0.393602 tig0016220:+161246 None:intergenic
CCTTGACGCCGCTTGTGTTA+AGG 0.393639 tig0016220:-161325 Msa1358020:CDS
TATTACAAAACCAACTTTGA+AGG 0.393656 tig0016220:+158722 None:intergenic
TCTCACGAAACGGGTTGAAC+CGG 0.399309 tig0016220:+161684 None:intergenic
GGAATTGCATTTCATTATTG+TGG 0.401293 tig0016220:-158608 Msa1358020:three_prime_UTR
AGGCTGCTGGGATTGATATA+AGG 0.409355 tig0016220:-161059 Msa1358020:CDS
TCTGCAACCCCTGGAAGTGC+AGG 0.411721 tig0016220:-160391 Msa1358020:CDS
GCCGGCGCCATACCACTTCT+GGG 0.416494 tig0016220:+160361 None:intergenic
GGATCCAAACGAGCAGCAAA+TGG 0.417377 tig0016220:-159809 Msa1358020:CDS
AAAGGAGTCATGGCTTGGTT+GGG 0.420072 tig0016220:+160604 None:intergenic
GCTACATATCAATGAAGATA+TGG 0.420115 tig0016220:-160284 Msa1358020:CDS
ACCCACAATGGTAGCACTAA+TGG 0.421586 tig0016220:+161386 None:intergenic
TAAGGCAGCGGAGGAGGAAA+AGG 0.424744 tig0016220:-161041 Msa1358020:CDS
CAGTATCTTCGTGAGGCAAT+GGG 0.426353 tig0016220:-159049 Msa1358020:CDS
TTGGATGAAATTGCCAAGTT+GGG 0.429250 tig0016220:-160712 Msa1358020:CDS
AGCTTTCAGGATTTCATCCT+CGG 0.436489 tig0016220:+161611 None:intergenic
TTGTATTCCTCTCACGAAAC+GGG 0.439246 tig0016220:+161675 None:intergenic
ATTGGATGAAATTGCCAAGT+TGG 0.444138 tig0016220:-160713 Msa1358020:CDS
AAGAACTTGAGGGGAAAAGA+AGG 0.444403 tig0016220:-160903 Msa1358020:CDS
GCAAATAAGGAGAGAGAGAA+AGG 0.446065 tig0016220:-159830 Msa1358020:CDS
ACTAATGGTTCTCCAACTAA+TGG 0.446782 tig0016220:+161401 None:intergenic
AGAGATGCGGGAGGAGGCCT+AGG 0.446989 tig0016220:+160004 None:intergenic
CCATACCACTTCTGGGAGTA+AGG 0.448683 tig0016220:+160368 None:intergenic
ATCCTCTTCAATCTTCTCCT+CGG 0.449369 tig0016220:+160120 None:intergenic
GAGGGAGTCAGCAGTGGGAT+TGG 0.449422 tig0016220:+160412 None:intergenic
AAGAGAGAATTGAAGGCTGC+TGG 0.451049 tig0016220:-161072 Msa1358020:CDS
TCCTGATAATCTTCTATGAC+AGG 0.451422 tig0016220:+159776 None:intergenic
TCATACTCATCCATATCAAC+AGG 0.454291 tig0016220:+161213 None:intergenic
TCCCCTGGACGCAATTTCCT+AGG 0.458724 tig0016220:+161276 None:intergenic
AGCTCCAGAGATGCGGGAGG+AGG 0.462789 tig0016220:+159998 None:intergenic
AGAGATTAATACCTGCGGTT+TGG 0.465069 tig0016220:+162196 None:intergenic
GTTAGATCCTTCCATTAAGA+AGG 0.466895 tig0016220:-161493 Msa1358020:CDS
TTTGTATTCCTCTCACGAAA+CGG 0.468892 tig0016220:+161674 None:intergenic
CAGAAATTCCGTTTGAGAAG+AGG 0.469889 tig0016220:-160999 Msa1358020:CDS
TGCAGAGAGGCAAGATGCCC+CGG 0.470266 tig0016220:-160830 Msa1358020:CDS
TAAAGGAGTCATGGCTTGGT+TGG 0.470630 tig0016220:+160603 None:intergenic
GAATTGCATTTCATTATTGT+GGG 0.471151 tig0016220:-158607 Msa1358020:three_prime_UTR
GAGTCTCAGACACCACTGTT+AGG 0.471291 tig0016220:-160505 Msa1358020:CDS
CTGAAAATTTGGCCAGGCTG+AGG 0.471566 tig0016220:-160528 Msa1358020:CDS
TTCTTAAAGGAGTCATGGCT+TGG 0.472192 tig0016220:+160599 None:intergenic
GTCTAAATGCCCTTCAAAGT+TGG 0.473158 tig0016220:-158732 Msa1358020:three_prime_UTR
TGGCATGCAGAATAGCAGCC+GGG 0.473211 tig0016220:+160812 None:intergenic
TTGATATAAGGCAGCGGAGG+AGG 0.474103 tig0016220:-161047 Msa1358020:CDS
AGCCAACCGAGCACATGCTT+CGG 0.476372 tig0016220:+161176 None:intergenic
CCAGTATCTTCGTGAGGCAA+TGG 0.479024 tig0016220:-159050 Msa1358020:CDS
TGATGTTGCTGATGAGGATA+GGG 0.479449 tig0016220:-160959 Msa1358020:CDS
AATTTCATCCAATTCTTGAT+CGG 0.479560 tig0016220:+160723 None:intergenic
GCGACCCGATCCTGTTGATA+TGG 0.481942 tig0016220:-161223 Msa1358020:CDS
AATCTGAAGGATGCAACTCC+GGG 0.484835 tig0016220:+160473 None:intergenic
TGTCTGAGACTCCCTCAGCC+TGG 0.484905 tig0016220:+160516 None:intergenic
AACGATCAAAAGTCATTCAA+AGG 0.485643 tig0016220:-160033 Msa1358020:CDS
ATTACAAAACCAACTTTGAA+GGG 0.488031 tig0016220:+158723 None:intergenic
TCCTCTTCAATCTTCTCCTC+GGG 0.488427 tig0016220:+160121 None:intergenic
ACCATTAGTGCTACCATTGT+GGG 0.490042 tig0016220:-161387 Msa1358020:CDS
GAGTAAGGCCTGCACTTCCA+GGG 0.490905 tig0016220:+160383 None:intergenic
AGAAGAAGAGGCACGGCAGA+AGG 0.493242 tig0016220:-160068 Msa1358020:CDS
CTCCTTTCTTATCATCTCGT+CGG 0.493278 tig0016220:+159904 None:intergenic
TCATTCAAAGGGAACTTCCT+AGG 0.493709 tig0016220:-160021 Msa1358020:CDS
AGGGTTCTGATAAGAGAGTA+AGG 0.493922 tig0016220:+162275 None:intergenic
TGCACTTCCAGGGGTTGCAG+AGG 0.493979 tig0016220:+160393 None:intergenic
AAATCTGAAGGATGCAACTC+CGG 0.494050 tig0016220:+160472 None:intergenic
ACGAGTAGCACTGCTGCCTT+CGG 0.495690 tig0016220:+160654 None:intergenic
CTGACTCCCTCTGCAACCCC+TGG 0.496434 tig0016220:-160400 Msa1358020:CDS
TTCCGAAGCATGTGCTCGGT+TGG 0.496711 tig0016220:-161178 Msa1358020:CDS
TCTTCTATGACAGGGATAGC+AGG 0.496725 tig0016220:+159785 None:intergenic
CTCAGTGGAGAACCATTAGT+TGG 0.497414 tig0016220:-161413 Msa1358020:CDS
GTCTCCGTCAGCTCTTATCA+AGG 0.499862 tig0016220:+159964 None:intergenic
GAAGTGGTATGGCGCCGGCA+AGG 0.499877 tig0016220:-160357 Msa1358020:CDS
AGGAGATCATGTAGATCTGT+TGG 0.501729 tig0016220:-158629 Msa1358020:three_prime_UTR
TGCTTTCCGAAGCATGTGCT+CGG 0.502006 tig0016220:-161182 Msa1358020:CDS
GTGAGAAGTAAGCTGGATGA+TGG 0.502979 tig0016220:-158947 Msa1358020:CDS
CTCATCCATATCAACAGGAT+CGG 0.503902 tig0016220:+161218 None:intergenic
ATCGCTGCCCACAAGGTCAA+TGG 0.504621 tig0016220:+160684 None:intergenic
AAGTAAGCTGGATGATGGGA+AGG 0.506469 tig0016220:-158942 Msa1358020:CDS
ATAGCATCTCCTTTACTAGC+TGG 0.506651 tig0016220:+160562 None:intergenic
AGAGGATATGTCTGATAGAA+TGG 0.507303 tig0016220:-160104 Msa1358020:CDS
CTAATAAGCTCCAGAGATGC+GGG 0.507417 tig0016220:+159992 None:intergenic
GGTTCAACCCGTTTCGTGAG+AGG 0.508197 tig0016220:-161682 Msa1358020:five_prime_UTR
TGCAGATTTGCAAACGAGTA+GGG 0.508803 tig0016220:+161545 None:intergenic
TCCCTGAGAGGAGTTCCCTT+CGG 0.510495 tig0016220:+160310 None:intergenic
GATGATTCGACTTGAGAAGA+AGG 0.511403 tig0016220:-158915 Msa1358020:CDS
TGATAGAATGGCTAGAGAAA+AGG 0.511992 tig0016220:-160092 Msa1358020:CDS
TTGGCATGCAGAATAGCAGC+CGG 0.514383 tig0016220:+160811 None:intergenic
CAGAGAACACCAGCTAGTAA+AGG 0.515217 tig0016220:-160571 Msa1358020:CDS
GTTGCAGAGGGAGTCAGCAG+TGG 0.516056 tig0016220:+160406 None:intergenic
AAGTGGTATGGCGCCGGCAA+GGG 0.516862 tig0016220:-160356 Msa1358020:CDS
GGTGAATGAGATAGATAGCT+AGG 0.518051 tig0016220:+162255 None:intergenic
GGTTATGCCATTGACCTTGT+GGG 0.519574 tig0016220:-160691 Msa1358020:CDS
TGGGTGTCTGTGGATAATTA+GGG 0.519886 tig0016220:+160623 None:intergenic
TTGATGTTGCTGATGAGGAT+AGG 0.524642 tig0016220:-160960 Msa1358020:CDS
TCGGCTTGCTCAATAGGGGT+TGG 0.524733 tig0016220:+159923 None:intergenic
TGAAAATTTGGCCAGGCTGA+GGG 0.525084 tig0016220:-160527 Msa1358020:CDS
GACCCTAGGAAATTGCGTCC+AGG 0.525314 tig0016220:-161279 Msa1358020:CDS
TGGATCTCAACTAATTAGTA+GGG 0.526169 tig0016220:-158653 Msa1358020:three_prime_UTR
CAAGTTCTTCTATAGTAGTA+GGG 0.528361 tig0016220:+160917 None:intergenic
AGAGGAGGCCTCTTCTCAAA+CGG 0.529206 tig0016220:+160991 None:intergenic
TGAGAATGTGAGAAGTAAGC+TGG 0.529343 tig0016220:-158954 Msa1358020:CDS
GCTTGCTCAATAGGGGTTGG+TGG 0.531592 tig0016220:+159926 None:intergenic
GCACTTCCAGGGGTTGCAGA+GGG 0.532965 tig0016220:+160394 None:intergenic
CATTGCCTCACGAAGATACT+GGG 0.534059 tig0016220:+159051 None:intergenic
TCATCCATATCAACAGGATC+GGG 0.534614 tig0016220:+161219 None:intergenic
AGCATTGTCATGCTCCAGTA+AGG 0.535038 tig0016220:+159874 None:intergenic
ACCCTAGGAAATTGCGTCCA+GGG 0.536757 tig0016220:-161278 Msa1358020:CDS
CACTCAGCCTTCTTAATGGA+AGG 0.540594 tig0016220:+161486 None:intergenic
GATCCAAACGAGCAGCAAAT+GGG 0.542547 tig0016220:-159808 Msa1358020:CDS
TTGCAGATTTGCAAACGAGT+AGG 0.543492 tig0016220:+161544 None:intergenic
AGAGAGAATTGAAGGCTGCT+GGG 0.549517 tig0016220:-161071 Msa1358020:CDS
GGGTTATGCCATTGACCTTG+TGG 0.550781 tig0016220:-160692 Msa1358020:CDS
TGATCGGAAATCTGAGGTGG+TGG 0.551298 tig0016220:+160739 None:intergenic
CCTTACTCCCAGAAGTGGTA+TGG 0.551739 tig0016220:-160368 Msa1358020:CDS
AGCCGACGAGATGATAAGAA+AGG 0.552168 tig0016220:-159906 Msa1358020:CDS
GAAAAGAAGGATTGATGTTG+AGG 0.552508 tig0016220:-160890 Msa1358020:CDS
GGTATGGCGCCGGCAAGGGA+TGG 0.553823 tig0016220:-160352 Msa1358020:CDS
AGGAGTTCTTAAAGGAGTCA+TGG 0.554344 tig0016220:+160594 None:intergenic
TCCCAGAAGTGGTATGGCGC+CGG 0.554437 tig0016220:-160362 Msa1358020:CDS
AACCATTAGTGCTACCATTG+TGG 0.555517 tig0016220:-161388 Msa1358020:CDS
CGCCGCTGTCACCAAACCGC+AGG 0.556653 tig0016220:-162207 Msa1358020:intron
TGAGAAAGCAAGACGTTGCA+AGG 0.556741 tig0016220:-160861 Msa1358020:CDS
GTCAATGGCATAACCCAACT+TGG 0.557603 tig0016220:+160699 None:intergenic
TAGAATCTCAGTAGCATCCA+AGG 0.561521 tig0016220:+158768 None:intergenic
GGATTCGGATCAATCTCCCC+TGG 0.561665 tig0016220:+161261 None:intergenic
CCCCTGGACGCAATTTCCTA+GGG 0.562986 tig0016220:+161277 None:intergenic
TCAACAGGATCGGGTCGCGC+AGG 0.566355 tig0016220:+161228 None:intergenic
CCTAATAAGCTCCAGAGATG+CGG 0.567582 tig0016220:+159991 None:intergenic
ACGATCAAAAGTCATTCAAA+GGG 0.567785 tig0016220:-160032 Msa1358020:CDS
CAAAACAGTGTAAAGCTCGT+TGG 0.569337 tig0016220:-161524 Msa1358020:CDS
TTGCAGAGGGAGTCAGCAGT+GGG 0.571318 tig0016220:+160407 None:intergenic
ACTACTATAGAAGAACTTGA+GGG 0.571318 tig0016220:-160913 Msa1358020:CDS
TAAAGGAGATGCTATCATGA+TGG 0.573963 tig0016220:-160554 Msa1358020:CDS
TCTCAACTAATTAGTAGGGT+AGG 0.578245 tig0016220:-158649 Msa1358020:three_prime_UTR
TTACTAGCTGGTGTTCTCTG+AGG 0.578802 tig0016220:+160574 None:intergenic
TAGAGAAAAGGCAGAAGAAG+AGG 0.579560 tig0016220:-160080 Msa1358020:CDS
CCTTAACACAAGCGGCGTCA+AGG 0.579579 tig0016220:+161325 None:intergenic
ATGAACCTGGTGATGACCCT+AGG 0.580871 tig0016220:-161293 Msa1358020:CDS
TCCGAAGGGAACTCCTCTCA+GGG 0.580985 tig0016220:-160311 Msa1358020:CDS
TTATTTGCTATCTCCTCAAG+CGG 0.583374 tig0016220:+159845 None:intergenic
ATGGCTTGGTTGGGTGTCTG+TGG 0.585691 tig0016220:+160613 None:intergenic
AAGGTTACATTACTCACGCA+AGG 0.586053 tig0016220:-158896 Msa1358020:CDS
AGTAAGGCCTGCACTTCCAG+GGG 0.586407 tig0016220:+160384 None:intergenic
AACTCCTTGATAAGAGCTGA+CGG 0.589304 tig0016220:-159968 Msa1358020:CDS
CCTGATAATCTTCTATGACA+GGG 0.589597 tig0016220:+159777 None:intergenic
GTAAAGCTCGTTGGTATGAG+TGG 0.590546 tig0016220:-161515 Msa1358020:CDS
TGCTTCAACAAAATCCTCGA+GGG 0.592155 tig0016220:+159012 None:intergenic
GGCTGAGTGGACTCGAGAAG+AGG 0.592972 tig0016220:-161472 Msa1358020:CDS
CTCCTTCGCAGTGTCTTGAA+CGG 0.594673 tig0016220:-161359 Msa1358020:CDS
TGCTGATGAGGATAGGGAGG+TGG 0.595277 tig0016220:-160953 Msa1358020:CDS
AGTGTTGCCAAAATGAGCAT+AGG 0.596521 tig0016220:-161648 Msa1358020:exon
TGAGAAGTAAGCTGGATGAT+GGG 0.598085 tig0016220:-158946 Msa1358020:CDS
TACTACTATAGAAGAACTTG+AGG 0.598439 tig0016220:-160914 Msa1358020:CDS
AAAAGGCAGAAGAAGAGGCA+CGG 0.599691 tig0016220:-160075 Msa1358020:CDS
TTTGAGAAGAGGCCTCCTCT+GGG 0.600719 tig0016220:-160988 Msa1358020:CDS
CTAATGGTTCTCCACTGAGT+AGG 0.603402 tig0016220:+161417 None:intergenic
TGGAAGCTGAAAATTTGGCC+AGG 0.607474 tig0016220:-160534 Msa1358020:CDS
GCTCGGTTGGCTAACACGAA+AGG 0.608258 tig0016220:-161165 Msa1358020:CDS
TCTCAGACACCACTGTTAGG+AGG 0.609284 tig0016220:-160502 Msa1358020:CDS
AGCGGAGGAGGAAAAGGAGA+GGG 0.609580 tig0016220:-161035 Msa1358020:CDS
AGAAACAGCTTGAGGAAGCG+AGG 0.613924 tig0016220:-161116 Msa1358020:CDS
CAATGCTAAGTATCCGCTTG+AGG 0.613956 tig0016220:-159858 Msa1358020:CDS
AATTTCCTAGGGTCATCACC+AGG 0.619740 tig0016220:+161288 None:intergenic
CAGCGGAGGAGGAAAAGGAG+AGG 0.619802 tig0016220:-161036 Msa1358020:CDS
CTGGGATTGATATAAGGCAG+CGG 0.621106 tig0016220:-161053 Msa1358020:CDS
ATCTGAAGACGACGATGCGG+CGG 0.621185 tig0016220:+162234 None:intergenic
ACTGTTAGGAGGAGAGAACC+CGG 0.623267 tig0016220:-160491 Msa1358020:CDS
GCAGGCCTTACTCCCAGAAG+TGG 0.624004 tig0016220:-160373 Msa1358020:CDS
CGAAGGAGTACGACCCACAA+TGG 0.624367 tig0016220:+161374 None:intergenic
CCCTAGGAAATTGCGTCCAG+GGG 0.631019 tig0016220:-161277 Msa1358020:CDS
CTCGTCGGCTTGCTCAATAG+GGG 0.633774 tig0016220:+159919 None:intergenic
AACAGCTTGAGGAAGCGAGG+AGG 0.635219 tig0016220:-161113 Msa1358020:CDS
GGCAGCGATGAACTCACCGA+AGG 0.635534 tig0016220:-160670 Msa1358020:CDS
TACCTGCGGTTTGGTGACAG+CGG 0.638908 tig0016220:+162205 None:intergenic
GGCATGCAGAATAGCAGCCG+GGG 0.639810 tig0016220:+160813 None:intergenic
AAGGACGATAACTATGAACC+TGG 0.641325 tig0016220:-161306 Msa1358020:CDS
GTGAATGAGATAGATAGCTA+GGG 0.645030 tig0016220:+162256 None:intergenic
TGTTGCTGATGAGGATAGGG+AGG 0.645550 tig0016220:-160956 Msa1358020:CDS
AGAAGATGCTGAAGAGCCCG+AGG 0.646686 tig0016220:-160137 Msa1358020:CDS
CTACTATAGAAGAACTTGAG+GGG 0.654103 tig0016220:-160912 Msa1358020:CDS
GCCCGAGGAGAAGATTGAAG+AGG 0.654306 tig0016220:-160122 Msa1358020:CDS
ATAGTGCTAGACTCGAGCTA+CGG 0.656913 tig0016220:-160252 Msa1358020:CDS
TGAGTTCATCGCTGCCCACA+AGG 0.658141 tig0016220:+160677 None:intergenic
AACAATAATTGAAAGAAACA+CGG 0.658402 tig0016220:+158818 None:intergenic
GTTATCGTCCTTAACACAAG+CGG 0.659717 tig0016220:+161317 None:intergenic
CTTCCATTAAGAAGGCTGAG+TGG 0.662166 tig0016220:-161485 Msa1358020:CDS
AATTCTTGATCGGAAATCTG+AGG 0.665249 tig0016220:+160733 None:intergenic
AGCTAGGGAGAAACAGCTTG+AGG 0.665565 tig0016220:-161124 Msa1358020:CDS
TACCGTTCAAGACACTGCGA+AGG 0.666095 tig0016220:+161357 None:intergenic
AGGTTACATTACTCACGCAA+GGG 0.667391 tig0016220:-158895 Msa1358020:CDS
CTAAGCTTACGCCTACTCAG+TGG 0.671805 tig0016220:-161428 Msa1358020:CDS
ACATCAAAATAACCCAGAGG+AGG 0.672004 tig0016220:+160976 None:intergenic
TCTTGATCGGAAATCTGAGG+TGG 0.678038 tig0016220:+160736 None:intergenic
GGGTTCTCTCCTCCTAACAG+TGG 0.680208 tig0016220:+160493 None:intergenic
CAGATCTGAAGACGACGATG+CGG 0.686816 tig0016220:+162231 None:intergenic
TGAAGCCCAGTATCTTCGTG+AGG 0.688109 tig0016220:-159056 Msa1358020:CDS
GTGCTTCAACAAAATCCTCG+AGG 0.688213 tig0016220:+159011 None:intergenic
ATATGTAGCTCATCCCTGAG+AGG 0.688581 tig0016220:+160298 None:intergenic
AGTATCTTCGTGAGGCAATG+GGG 0.696178 tig0016220:-159048 Msa1358020:CDS
GGATTGATATAAGGCAGCGG+AGG 0.699913 tig0016220:-161050 Msa1358020:CDS
TGATATGGATGAGTATGAGA+AGG 0.714958 tig0016220:-161208 Msa1358020:CDS
ATAAGCTCCAGAGATGCGGG+AGG 0.719647 tig0016220:+159995 None:intergenic
TGTCATAGAAGATTATCAGG+AGG 0.727087 tig0016220:-159774 Msa1358020:CDS
TAAACGAGTCTCCTGCACTG+TGG 0.742646 tig0016220:-161712 Msa1358020:five_prime_UTR
GTATGAAAATGATTCCCTCG+AGG 0.743505 tig0016220:-159026 Msa1358020:CDS
CAAGGAATAAAATTGCAGAG+AGG 0.745082 tig0016220:-160843 Msa1358020:CDS
GCAACATCAAAATAACCCAG+AGG 0.761769 tig0016220:+160973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATCATTTGATTAATT+AGG - tig0016220:161510-161529 Msa1358020:CDS 10.0%
!!! TTTTTCAAATCTGAAATTTA+GGG + tig0016220:158834-158853 None:intergenic 15.0%
!! AGGCATAAAAATAAAATTAA+AGG + tig0016220:161155-161174 None:intergenic 15.0%
!! ATTATAACTGAAAAAAAACA+AGG + tig0016220:161497-161516 None:intergenic 15.0%
!! TTTCTTTCAATTATTGTTAA+TGG - tig0016220:162049-162068 Msa1358020:intron 15.0%
!!! GTTTTTCAAATCTGAAATTT+AGG + tig0016220:158835-158854 None:intergenic 20.0%
!! TTTCAGATTTGAAAAACAAT+TGG - tig0016220:158838-158857 Msa1358020:three_prime_UTR 20.0%
!! AAAAGAATAGTATAGTATAG+CGG + tig0016220:158926-158945 None:intergenic 20.0%
!!! ACAAAGTACTAATAATTTCA+AGG + tig0016220:161293-161312 None:intergenic 20.0%
!! AAGTTTGTATTACTATCATT+CGG + tig0016220:161648-161667 None:intergenic 20.0%
!! ATAATAATTAACAAGCAGTT+TGG + tig0016220:161671-161690 None:intergenic 20.0%
!! TATTATTATCTGTTCTCAAT+AGG - tig0016220:161764-161783 Msa1358020:intron 20.0%
!! AACAATAATTGAAAGAAACA+CGG + tig0016220:162047-162066 None:intergenic 20.0%
! AATTCCAAAAATCAACTTCT+GGG + tig0016220:158878-158897 None:intergenic 25.0%
! AAATTCCAAAAATCAACTTC+TGG + tig0016220:158879-158898 None:intergenic 25.0%
!!! AAGTTGATTTTTGGAATTTG+AGG - tig0016220:158880-158899 Msa1358020:CDS 25.0%
! TGAAATATGGTAAAAATCAG+TGG - tig0016220:159281-159300 Msa1358020:intron 25.0%
! GAAATATGGTAAAAATCAGT+GGG - tig0016220:159282-159301 Msa1358020:intron 25.0%
! AATTTCATCCAATTCTTGAT+CGG + tig0016220:160142-160161 None:intergenic 25.0%
!! ATGTGAATTTCCTTTTTCTT+AGG + tig0016220:160429-160448 None:intergenic 25.0%
! ATGAAGAAAAGCGAATTAAA+AGG + tig0016220:161175-161194 None:intergenic 25.0%
! TTGTCCGATTATTAATTACT+TGG - tig0016220:161309-161328 Msa1358020:CDS 25.0%
! GATGCCAAGTAATTAATAAT+CGG + tig0016220:161316-161335 None:intergenic 25.0%
!! ATTTTTACATAAGATTCCAG+TGG + tig0016220:161378-161397 None:intergenic 25.0%
! TAGGGAATAAATGTTGTAAA+AGG + tig0016220:161611-161630 None:intergenic 25.0%
! ATTACAAAACCAACTTTGAA+GGG + tig0016220:162142-162161 None:intergenic 25.0%
! TATTACAAAACCAACTTTGA+AGG + tig0016220:162143-162162 None:intergenic 25.0%
!!! AATTGCAACAGTTTTAAGTT+AGG + tig0016220:162180-162199 None:intergenic 25.0%
! GAATTGCATTTCATTATTGT+GGG - tig0016220:162255-162274 Msa1358020:five_prime_UTR 25.0%
CGAAATCAATGAATTGTAAG+AGG + tig0016220:158735-158754 None:intergenic 30.0%
!! CCATTACAATCGATTTTCTA+GGG - tig0016220:158783-158802 Msa1358020:three_prime_UTR 30.0%
! AATCTGAAATTTAGGGTAAG+CGG + tig0016220:158827-158846 None:intergenic 30.0%
GAAAAACAATTGGATTTCGT+TGG - tig0016220:158848-158867 Msa1358020:three_prime_UTR 30.0%
!! AGGTTGTCATTGTTTGTTTT+TGG - tig0016220:158900-158919 Msa1358020:CDS 30.0%
TAGAGGTCAAATGCAATTAA+GGG + tig0016220:158971-158990 None:intergenic 30.0%
AAAGCTGCTGTTATGAAATA+TGG - tig0016220:159268-159287 Msa1358020:intron 30.0%
CGAAAGGTAAAAAAGCAAAA+AGG - tig0016220:159713-159732 Msa1358020:intron 30.0%
AAAAAGCAAAAAGGAAAGCT+AGG - tig0016220:159722-159741 Msa1358020:intron 30.0%
AAAAGCAAAAAGGAAAGCTA+GGG - tig0016220:159723-159742 Msa1358020:intron 30.0%
ACAGAAAAAGAGAGAATTGA+AGG - tig0016220:159783-159802 Msa1358020:CDS 30.0%
!!! TTATTTTGATGTTGCTGATG+AGG - tig0016220:159897-159916 Msa1358020:CDS 30.0%
CAAGTTCTTCTATAGTAGTA+GGG + tig0016220:159948-159967 None:intergenic 30.0%
TCAAGTTCTTCTATAGTAGT+AGG + tig0016220:159949-159968 None:intergenic 30.0%
TACTACTATAGAAGAACTTG+AGG - tig0016220:159948-159967 Msa1358020:CDS 30.0%
ACTACTATAGAAGAACTTGA+GGG - tig0016220:159949-159968 Msa1358020:CDS 30.0%
! ATCTCTTTCTAACTGTTTCT+GGG + tig0016220:160089-160108 None:intergenic 30.0%
GCTACATATCAATGAAGATA+TGG - tig0016220:160578-160597 Msa1358020:CDS 30.0%
!! ACTATCTGGTACTCATTTTT+AGG + tig0016220:160690-160709 None:intergenic 30.0%
AACGATCAAAAGTCATTCAA+AGG - tig0016220:160829-160848 Msa1358020:CDS 30.0%
ACGATCAAAAGTCATTCAAA+GGG - tig0016220:160830-160849 Msa1358020:CDS 30.0%
AATATGCAACTAGCTCATAA+AGG + tig0016220:161445-161464 None:intergenic 30.0%
TATGAGCTAGTTGCATATTA+TGG - tig0016220:161446-161465 Msa1358020:CDS 30.0%
TGACTCCTTAAATTTGACTA+TGG - tig0016220:161692-161711 Msa1358020:five_prime_UTR 30.0%
CATCTCCATAGTCAAATTTA+AGG + tig0016220:161700-161719 None:intergenic 30.0%
!! CTGTTGCAATTGTTGATTTA+TGG - tig0016220:162189-162208 Msa1358020:intron 30.0%
ATGGATCTCAACTAATTAGT+AGG - tig0016220:162208-162227 Msa1358020:five_prime_UTR 30.0%
TGGATCTCAACTAATTAGTA+GGG - tig0016220:162209-162228 Msa1358020:five_prime_UTR 30.0%
GGAATTGCATTTCATTATTG+TGG - tig0016220:162254-162273 Msa1358020:five_prime_UTR 30.0%
GTGAATGAGATAGATAGCTA+GGG + tig0016220:158609-158628 None:intergenic 35.0%
AAGCAAGAGATTAATACCTG+CGG + tig0016220:158674-158693 None:intergenic 35.0%
!! GCCATTACAATCGATTTTCT+AGG - tig0016220:158782-158801 Msa1358020:three_prime_UTR 35.0%
CCCTAGAAAATCGATTGTAA+TGG + tig0016220:158786-158805 None:intergenic 35.0%
!! AATGCAATTAAGGGTTGGTT+TGG + tig0016220:158962-158981 None:intergenic 35.0%
GTAGAGGTCAAATGCAATTA+AGG + tig0016220:158972-158991 None:intergenic 35.0%
TACTTGTACATCACCGAATT+CGG - tig0016220:158989-159008 Msa1358020:CDS 35.0%
AACTGATCTGACAGTAGAAA+GGG + tig0016220:159021-159040 None:intergenic 35.0%
GAGATTGATACAAGTAGCTA+GGG + tig0016220:159060-159079 None:intergenic 35.0%
AGAGATTGATACAAGTAGCT+AGG + tig0016220:159061-159080 None:intergenic 35.0%
TTTGTATTCCTCTCACGAAA+CGG + tig0016220:159191-159210 None:intergenic 35.0%
ATTTCATAACAGCAGCTTTC+AGG + tig0016220:159267-159286 None:intergenic 35.0%
GTTAGATCCTTCCATTAAGA+AGG - tig0016220:159369-159388 Msa1358020:intron 35.0%
ACTAATGGTTCTCCAACTAA+TGG + tig0016220:159464-159483 None:intergenic 35.0%
TCATACTCATCCATATCAAC+AGG + tig0016220:159652-159671 None:intergenic 35.0%
TGATATGGATGAGTATGAGA+AGG - tig0016220:159654-159673 Msa1358020:intron 35.0%
CTACTATAGAAGAACTTGAG+GGG - tig0016220:159950-159969 Msa1358020:CDS 35.0%
GAAAAGAAGGATTGATGTTG+AGG - tig0016220:159972-159991 Msa1358020:CDS 35.0%
CAAGGAATAAAATTGCAGAG+AGG - tig0016220:160019-160038 Msa1358020:CDS 35.0%
GATCTCTTTCTAACTGTTTC+TGG + tig0016220:160090-160109 None:intergenic 35.0%
AATTCTTGATCGGAAATCTG+AGG + tig0016220:160132-160151 None:intergenic 35.0%
TCAGATTTCCGATCAAGAAT+TGG - tig0016220:160131-160150 Msa1358020:CDS 35.0%
ATTGGATGAAATTGCCAAGT+TGG - tig0016220:160149-160168 Msa1358020:CDS 35.0%
TTGGATGAAATTGCCAAGTT+GGG - tig0016220:160150-160169 Msa1358020:CDS 35.0%
TAAAGGAGATGCTATCATGA+TGG - tig0016220:160308-160327 Msa1358020:CDS 35.0%
! CATGATGGAAGCTGAAAATT+TGG - tig0016220:160323-160342 Msa1358020:CDS 35.0%
! TTGCATCCTTCAGATTTTTC+TGG - tig0016220:160396-160415 Msa1358020:CDS 35.0%
! TGCATCCTTCAGATTTTTCT+GGG - tig0016220:160397-160416 Msa1358020:CDS 35.0%
TCTTCAGCATCTTCTTGAAT+TGG + tig0016220:160720-160739 None:intergenic 35.0%
AGAGGATATGTCTGATAGAA+TGG - tig0016220:160758-160777 Msa1358020:CDS 35.0%
TGATAGAATGGCTAGAGAAA+AGG - tig0016220:160770-160789 Msa1358020:CDS 35.0%
!! TTATTTGCTATCTCCTCAAG+CGG + tig0016220:161020-161039 None:intergenic 35.0%
CCTGATAATCTTCTATGACA+GGG + tig0016220:161088-161107 None:intergenic 35.0%
TCCTGATAATCTTCTATGAC+AGG + tig0016220:161089-161108 None:intergenic 35.0%
TGTCATAGAAGATTATCAGG+AGG - tig0016220:161088-161107 Msa1358020:CDS 35.0%
AAGATTCCAGTGGTTTCAAA+GGG + tig0016220:161368-161387 None:intergenic 35.0%
TAAGATTCCAGTGGTTTCAA+AGG + tig0016220:161369-161388 None:intergenic 35.0%
TCGGCGAATTAAGGTAAATA+GGG + tig0016220:161629-161648 None:intergenic 35.0%
TTCGGCGAATTAAGGTAAAT+AGG + tig0016220:161630-161649 None:intergenic 35.0%
TACTATCATTCGGCGAATTA+AGG + tig0016220:161638-161657 None:intergenic 35.0%
! TTTGTAGTTGTCTAGTTCCT+TGG - tig0016220:162077-162096 Msa1358020:intron 35.0%
TCTCAACTAATTAGTAGGGT+AGG - tig0016220:162213-162232 Msa1358020:five_prime_UTR 35.0%
!!! TTTTTGGTTTGGTTTCACGG+TGG + tig0016220:158564-158583 None:intergenic 40.0%
ACCGTGAAACCAAACCAAAA+AGG - tig0016220:158563-158582 Msa1358020:three_prime_UTR 40.0%
!!! CCCTTTTTGGTTTGGTTTCA+CGG + tig0016220:158567-158586 None:intergenic 40.0%
CCGTGAAACCAAACCAAAAA+GGG - tig0016220:158564-158583 Msa1358020:three_prime_UTR 40.0%
! TAAGAGAGTAAGGCCCTTTT+TGG + tig0016220:158580-158599 None:intergenic 40.0%
! AGGGTTCTGATAAGAGAGTA+AGG + tig0016220:158590-158609 None:intergenic 40.0%
GGTGAATGAGATAGATAGCT+AGG + tig0016220:158610-158629 None:intergenic 40.0%
AGAGATTAATACCTGCGGTT+TGG + tig0016220:158669-158688 None:intergenic 40.0%
CCAAAAATCAACTTCTGGGT+CGG + tig0016220:158874-158893 None:intergenic 40.0%
GGTCAAATGCAATTAAGGGT+TGG + tig0016220:158967-158986 None:intergenic 40.0%
! ATTCGGTGATGTACAAGTAG+AGG + tig0016220:158988-159007 None:intergenic 40.0%
ACTTGTACATCACCGAATTC+GGG - tig0016220:158990-159009 Msa1358020:CDS 40.0%
ACTGATCTGACAGTAGAAAG+GGG + tig0016220:159020-159039 None:intergenic 40.0%
GAACTGATCTGACAGTAGAA+AGG + tig0016220:159022-159041 None:intergenic 40.0%
! AAGTAGCTAGGGTTCTGATA+TGG + tig0016220:159049-159068 None:intergenic 40.0%
TTGTATTCCTCTCACGAAAC+GGG + tig0016220:159190-159209 None:intergenic 40.0%
AGTGTTGCCAAAATGAGCAT+AGG - tig0016220:159214-159233 Msa1358020:intron 40.0%
! CCAAACACCTATGCTCATTT+TGG + tig0016220:159224-159243 None:intergenic 40.0%
CCAAAATGAGCATAGGTGTT+TGG - tig0016220:159221-159240 Msa1358020:intron 40.0%
AGCTTTCAGGATTTCATCCT+CGG + tig0016220:159254-159273 None:intergenic 40.0%
TGCAGATTTGCAAACGAGTA+GGG + tig0016220:159320-159339 None:intergenic 40.0%
TTGCAGATTTGCAAACGAGT+AGG + tig0016220:159321-159340 None:intergenic 40.0%
CAAAACAGTGTAAAGCTCGT+TGG - tig0016220:159338-159357 Msa1358020:intron 40.0%
AACCATTAGTGCTACCATTG+TGG - tig0016220:159474-159493 Msa1358020:intron 40.0%
ACCATTAGTGCTACCATTGT+GGG - tig0016220:159475-159494 Msa1358020:intron 40.0%
GTTATCGTCCTTAACACAAG+CGG + tig0016220:159548-159567 None:intergenic 40.0%
AAGGACGATAACTATGAACC+TGG - tig0016220:159556-159575 Msa1358020:intron 40.0%
TCATCCATATCAACAGGATC+GGG + tig0016220:159646-159665 None:intergenic 40.0%
CTCATCCATATCAACAGGAT+CGG + tig0016220:159647-159666 None:intergenic 40.0%
CAGAAATTCCGTTTGAGAAG+AGG - tig0016220:159863-159882 Msa1358020:CDS 40.0%
ACATCAAAATAACCCAGAGG+AGG + tig0016220:159889-159908 None:intergenic 40.0%
GCAACATCAAAATAACCCAG+AGG + tig0016220:159892-159911 None:intergenic 40.0%
TTGATGTTGCTGATGAGGAT+AGG - tig0016220:159902-159921 Msa1358020:CDS 40.0%
TGATGTTGCTGATGAGGATA+GGG - tig0016220:159903-159922 Msa1358020:CDS 40.0%
AAGAACTTGAGGGGAAAAGA+AGG - tig0016220:159959-159978 Msa1358020:CDS 40.0%
TGGGTGTCTGTGGATAATTA+GGG + tig0016220:160242-160261 None:intergenic 40.0%
TTGGGTGTCTGTGGATAATT+AGG + tig0016220:160243-160262 None:intergenic 40.0%
TTCTTAAAGGAGTCATGGCT+TGG + tig0016220:160266-160285 None:intergenic 40.0%
AGGAGTTCTTAAAGGAGTCA+TGG + tig0016220:160271-160290 None:intergenic 40.0%
! GTTCTCTGAGGAGTTCTTAA+AGG + tig0016220:160279-160298 None:intergenic 40.0%
ATAGCATCTCCTTTACTAGC+TGG + tig0016220:160303-160322 None:intergenic 40.0%
AAATCTGAAGGATGCAACTC+CGG + tig0016220:160393-160412 None:intergenic 40.0%
! GCATCCTTCAGATTTTTCTG+GGG - tig0016220:160398-160417 Msa1358020:CDS 40.0%
AAAGAAAAACCATCCCTTGC+CGG + tig0016220:160522-160541 None:intergenic 40.0%
! GCAAGGGATGGTTTTTCTTT+TGG - tig0016220:160522-160541 Msa1358020:CDS 40.0%
ATGAAAAAAAGTCTGCGCTC+TGG - tig0016220:160645-160664 Msa1358020:CDS 40.0%
!! ACTCATTTTTAGGCTGTGGA+AGG + tig0016220:160680-160699 None:intergenic 40.0%
!! TGGTACTCATTTTTAGGCTG+TGG + tig0016220:160684-160703 None:intergenic 40.0%
GAATTGGTTGCATCACTATC+TGG + tig0016220:160704-160723 None:intergenic 40.0%
ATCCTCTTCAATCTTCTCCT+CGG + tig0016220:160745-160764 None:intergenic 40.0%
TAGAGAAAAGGCAGAAGAAG+AGG - tig0016220:160782-160801 Msa1358020:CDS 40.0%
TCATTCAAAGGGAACTTCCT+AGG - tig0016220:160841-160860 Msa1358020:CDS 40.0%
AACTCCTTGATAAGAGCTGA+CGG - tig0016220:160894-160913 Msa1358020:CDS 40.0%
CTCCTTTCTTATCATCTCGT+CGG + tig0016220:160961-160980 None:intergenic 40.0%
GCTTGAGGAGATAGCAAATA+AGG - tig0016220:161019-161038 Msa1358020:CDS 40.0%
GCAAATAAGGAGAGAGAGAA+AGG - tig0016220:161032-161051 Msa1358020:CDS 40.0%
CCCTGTCATAGAAGATTATC+AGG - tig0016220:161085-161104 Msa1358020:CDS 40.0%
! TTGTTCACCTTTTCACCCTT+TGG - tig0016220:161210-161229 Msa1358020:CDS 40.0%
! TGTTCACCTTTTCACCCTTT+GGG - tig0016220:161211-161230 Msa1358020:CDS 40.0%
ATCATGTTGTGTACCCCAAA+GGG + tig0016220:161228-161247 None:intergenic 40.0%
AATCATGTTGTGTACCCCAA+AGG + tig0016220:161229-161248 None:intergenic 40.0%
TGGTTTCAAAGGGGTGAAAA+GGG + tig0016220:161358-161377 None:intergenic 40.0%
AGATTCCAGTGGTTTCAAAG+GGG + tig0016220:161367-161386 None:intergenic 40.0%
GAGCTAGTTGCATATTATGG+TGG - tig0016220:161449-161468 Msa1358020:CDS 40.0%
GTATGAAAATGATTCCCTCG+AGG - tig0016220:161836-161855 Msa1358020:intron 40.0%
TGCTTCAACAAAATCCTCGA+GGG + tig0016220:161853-161872 None:intergenic 40.0%
TGAGAATGTGAGAAGTAAGC+TGG - tig0016220:161908-161927 Msa1358020:intron 40.0%
TGAGAAGTAAGCTGGATGAT+GGG - tig0016220:161916-161935 Msa1358020:intron 40.0%
! GATGATTCGACTTGAGAAGA+AGG - tig0016220:161947-161966 Msa1358020:intron 40.0%
AAGGTTACATTACTCACGCA+AGG - tig0016220:161966-161985 Msa1358020:intron 40.0%
AGGTTACATTACTCACGCAA+GGG - tig0016220:161967-161986 Msa1358020:intron 40.0%
TAGAATCTCAGTAGCATCCA+AGG + tig0016220:162097-162116 None:intergenic 40.0%
GTCTAAATGCCCTTCAAAGT+TGG - tig0016220:162130-162149 Msa1358020:intron 40.0%
AGGAGATCATGTAGATCTGT+TGG - tig0016220:162233-162252 Msa1358020:five_prime_UTR 40.0%
!!! GAGTAAGGCCCTTTTTGGTT+TGG + tig0016220:158575-158594 None:intergenic 45.0%
GTAAGCGGAAGAGAAGGAAT+AGG + tig0016220:158812-158831 None:intergenic 45.0%
! TTTAGGGTAAGCGGAAGAGA+AGG + tig0016220:158818-158837 None:intergenic 45.0%
!! CCGACCCAGAAGTTGATTTT+TGG - tig0016220:158871-158890 Msa1358020:exon 45.0%
! TAGCTAGGGTTCTGATATGG+TGG + tig0016220:159046-159065 None:intergenic 45.0%
AGGTGTTTGGAAAAACACCG+AGG - tig0016220:159234-159253 Msa1358020:intron 45.0%
GTAAAGCTCGTTGGTATGAG+TGG - tig0016220:159347-159366 Msa1358020:intron 45.0%
CACTCAGCCTTCTTAATGGA+AGG + tig0016220:159379-159398 None:intergenic 45.0%
CTTCCATTAAGAAGGCTGAG+TGG - tig0016220:159377-159396 Msa1358020:intron 45.0%
AGTCCACTCAGCCTTCTTAA+TGG + tig0016220:159383-159402 None:intergenic 45.0%
CTAATGGTTCTCCACTGAGT+AGG + tig0016220:159448-159467 None:intergenic 45.0%
CTCAGTGGAGAACCATTAGT+TGG - tig0016220:159449-159468 Msa1358020:intron 45.0%
ACCCACAATGGTAGCACTAA+TGG + tig0016220:159479-159498 None:intergenic 45.0%
AATTTCCTAGGGTCATCACC+AGG + tig0016220:159577-159596 None:intergenic 45.0%
AAGAGAGAATTGAAGGCTGC+TGG - tig0016220:159790-159809 Msa1358020:CDS 45.0%
AGAGAGAATTGAAGGCTGCT+GGG - tig0016220:159791-159810 Msa1358020:CDS 45.0%
AGGCTGCTGGGATTGATATA+AGG - tig0016220:159803-159822 Msa1358020:CDS 45.0%
CTGGGATTGATATAAGGCAG+CGG - tig0016220:159809-159828 Msa1358020:CDS 45.0%
TGAGAAAGCAAGACGTTGCA+AGG - tig0016220:160001-160020 Msa1358020:CDS 45.0%
TTCTGGGTCATTCAGCTTCT+TGG + tig0016220:160073-160092 None:intergenic 45.0%
TCTTGATCGGAAATCTGAGG+TGG + tig0016220:160129-160148 None:intergenic 45.0%
GTCAATGGCATAACCCAACT+TGG + tig0016220:160166-160185 None:intergenic 45.0%
GGTTATGCCATTGACCTTGT+GGG - tig0016220:160171-160190 Msa1358020:CDS 45.0%
!! AAAGGAGTCATGGCTTGGTT+GGG + tig0016220:160261-160280 None:intergenic 45.0%
!! TAAAGGAGTCATGGCTTGGT+TGG + tig0016220:160262-160281 None:intergenic 45.0%
TTACTAGCTGGTGTTCTCTG+AGG + tig0016220:160291-160310 None:intergenic 45.0%
CAGAGAACACCAGCTAGTAA+AGG - tig0016220:160291-160310 Msa1358020:CDS 45.0%
TGGAAGCTGAAAATTTGGCC+AGG - tig0016220:160328-160347 Msa1358020:CDS 45.0%
TGAAAATTTGGCCAGGCTGA+GGG - tig0016220:160335-160354 Msa1358020:CDS 45.0%
AATCTGAAGGATGCAACTCC+GGG + tig0016220:160392-160411 None:intergenic 45.0%
GTGACCCCAGAAAAATCTGA+AGG + tig0016220:160405-160424 None:intergenic 45.0%
TGGGGTCACTCCTAAGAAAA+AGG - tig0016220:160416-160435 Msa1358020:CDS 45.0%
! TTCTTTTGGCATGACTCCGA+AGG - tig0016220:160536-160555 Msa1358020:CDS 45.0%
! TCTTTTGGCATGACTCCGAA+GGG - tig0016220:160537-160556 Msa1358020:CDS 45.0%
ATATGTAGCTCATCCCTGAG+AGG + tig0016220:160567-160586 None:intergenic 45.0%
ATAGTGCTAGACTCGAGCTA+CGG - tig0016220:160610-160629 Msa1358020:CDS 45.0%
TCCTCTTCAATCTTCTCCTC+GGG + tig0016220:160744-160763 None:intergenic 45.0%
AAAAGGCAGAAGAAGAGGCA+CGG - tig0016220:160787-160806 Msa1358020:CDS 45.0%
CTAATAAGCTCCAGAGATGC+GGG + tig0016220:160873-160892 None:intergenic 45.0%
CCTAATAAGCTCCAGAGATG+CGG + tig0016220:160874-160893 None:intergenic 45.0%
AGCCGACGAGATGATAAGAA+AGG - tig0016220:160956-160975 Msa1358020:CDS 45.0%
!! AAAGGAGCTTCTAGCCTTAC+TGG - tig0016220:160974-160993 Msa1358020:CDS 45.0%
AGCATTGTCATGCTCCAGTA+AGG + tig0016220:160991-161010 None:intergenic 45.0%
CAATGCTAAGTATCCGCTTG+AGG - tig0016220:161004-161023 Msa1358020:CDS 45.0%
GATCCAAACGAGCAGCAAAT+GGG - tig0016220:161054-161073 Msa1358020:CDS 45.0%
TCTTCTATGACAGGGATAGC+AGG + tig0016220:161080-161099 None:intergenic 45.0%
! GTTCACCTTTTCACCCTTTG+GGG - tig0016220:161212-161231 Msa1358020:CDS 45.0%
GGTTTCAAAGGGGTGAAAAG+GGG + tig0016220:161357-161376 None:intergenic 45.0%
GTGGTTTCAAAGGGGTGAAA+AGG + tig0016220:161359-161378 None:intergenic 45.0%
!! TTTCACCCCTTTGAAACCAC+TGG - tig0016220:161359-161378 Msa1358020:CDS 45.0%
CATTGCCTCACGAAGATACT+GGG + tig0016220:161814-161833 None:intergenic 45.0%
CAGTATCTTCGTGAGGCAAT+GGG - tig0016220:161813-161832 Msa1358020:intron 45.0%
AGTATCTTCGTGAGGCAATG+GGG - tig0016220:161814-161833 Msa1358020:intron 45.0%
GTGCTTCAACAAAATCCTCG+AGG + tig0016220:161854-161873 None:intergenic 45.0%
GTGAGAAGTAAGCTGGATGA+TGG - tig0016220:161915-161934 Msa1358020:intron 45.0%
!! AAGTAAGCTGGATGATGGGA+AGG - tig0016220:161920-161939 Msa1358020:intron 45.0%
!! AAAATTAAATAGAAAAAATT+TGG - tig0016220:161393-161412 Msa1358020:CDS 5.0%
CAGATCTGAAGACGACGATG+CGG + tig0016220:158634-158653 None:intergenic 50.0%
GAAAGGGGTAGTCCCGAATT+CGG + tig0016220:159005-159024 None:intergenic 50.0%
TAAACGAGTCTCCTGCACTG+TGG - tig0016220:159150-159169 Msa1358020:intron 50.0%
! CTCCTGCACTGTGGTTTTTC+CGG - tig0016220:159159-159178 Msa1358020:intron 50.0%
AACCGGAAAAACCACAGTGC+AGG + tig0016220:159164-159183 None:intergenic 50.0%
!! TCTCACGAAACGGGTTGAAC+CGG + tig0016220:159181-159200 None:intergenic 50.0%
CTAAGCTTACGCCTACTCAG+TGG - tig0016220:159434-159453 Msa1358020:intron 50.0%
CTCCTTCGCAGTGTCTTGAA+CGG - tig0016220:159503-159522 Msa1358020:intron 50.0%
TACCGTTCAAGACACTGCGA+AGG + tig0016220:159508-159527 None:intergenic 50.0%
! ATGAACCTGGTGATGACCCT+AGG - tig0016220:159569-159588 Msa1358020:intron 50.0%
ACCCTAGGAAATTGCGTCCA+GGG - tig0016220:159584-159603 Msa1358020:intron 50.0%
GCAGGCTTCGATTCAGGATT+CGG + tig0016220:159619-159638 None:intergenic 50.0%
TGCTTTCCGAAGCATGTGCT+CGG - tig0016220:159680-159699 Msa1358020:intron 50.0%
AGCTAGGGAGAAACAGCTTG+AGG - tig0016220:159738-159757 Msa1358020:intron 50.0%
AGAAACAGCTTGAGGAAGCG+AGG - tig0016220:159746-159765 Msa1358020:intron 50.0%
GGATTGATATAAGGCAGCGG+AGG - tig0016220:159812-159831 Msa1358020:CDS 50.0%
TTGATATAAGGCAGCGGAGG+AGG - tig0016220:159815-159834 Msa1358020:CDS 50.0%
AGAGGAGGCCTCTTCTCAAA+CGG + tig0016220:159874-159893 None:intergenic 50.0%
TTTGAGAAGAGGCCTCCTCT+GGG - tig0016220:159874-159893 Msa1358020:CDS 50.0%
TGTTGCTGATGAGGATAGGG+AGG - tig0016220:159906-159925 Msa1358020:CDS 50.0%
TTGGCATGCAGAATAGCAGC+CGG + tig0016220:160054-160073 None:intergenic 50.0%
! TGATCGGAAATCTGAGGTGG+TGG + tig0016220:160126-160145 None:intergenic 50.0%
GGGTTATGCCATTGACCTTG+TGG - tig0016220:160170-160189 Msa1358020:CDS 50.0%
CTGAAAATTTGGCCAGGCTG+AGG - tig0016220:160334-160353 Msa1358020:CDS 50.0%
GAGTCTCAGACACCACTGTT+AGG - tig0016220:160357-160376 Msa1358020:CDS 50.0%
TCTCAGACACCACTGTTAGG+AGG - tig0016220:160360-160379 Msa1358020:CDS 50.0%
ACTGTTAGGAGGAGAGAACC+CGG - tig0016220:160371-160390 Msa1358020:CDS 50.0%
! CCATACCACTTCTGGGAGTA+AGG + tig0016220:160497-160516 None:intergenic 50.0%
CCTTACTCCCAGAAGTGGTA+TGG - tig0016220:160494-160513 Msa1358020:CDS 50.0%
!! CCGCATCTCTGGAGCTTATT+AGG - tig0016220:160871-160890 Msa1358020:CDS 50.0%
GTCTCCGTCAGCTCTTATCA+AGG + tig0016220:160901-160920 None:intergenic 50.0%
!! TCTCGTCGGCTTGCTCAATA+GGG + tig0016220:160947-160966 None:intergenic 50.0%
!! ATCTCGTCGGCTTGCTCAAT+AGG + tig0016220:160948-160967 None:intergenic 50.0%
GGATCCAAACGAGCAGCAAA+TGG - tig0016220:161053-161072 Msa1358020:CDS 50.0%
GTGTACCCCAAAGGGTGAAA+AGG + tig0016220:161220-161239 None:intergenic 50.0%
TGAAGCCCAGTATCTTCGTG+AGG - tig0016220:161806-161825 Msa1358020:intron 50.0%
CCATTGCCTCACGAAGATAC+TGG + tig0016220:161815-161834 None:intergenic 50.0%
CCAGTATCTTCGTGAGGCAA+TGG - tig0016220:161812-161831 Msa1358020:intron 50.0%
ATCTGAAGACGACGATGCGG+CGG + tig0016220:158631-158650 None:intergenic 55.0%
!! TACCTGCGGTTTGGTGACAG+CGG + tig0016220:158660-158679 None:intergenic 55.0%
GGTTCAACCCGTTTCGTGAG+AGG - tig0016220:159180-159199 Msa1358020:intron 55.0%
! CGAAGGAGTACGACCCACAA+TGG + tig0016220:159491-159510 None:intergenic 55.0%
CCTTAACACAAGCGGCGTCA+AGG + tig0016220:159540-159559 None:intergenic 55.0%
CCTTGACGCCGCTTGTGTTA+AGG - tig0016220:159537-159556 Msa1358020:intron 55.0%
GACCCTAGGAAATTGCGTCC+AGG - tig0016220:159583-159602 Msa1358020:intron 55.0%
CCCCTGGACGCAATTTCCTA+GGG + tig0016220:159588-159607 None:intergenic 55.0%
CCCTAGGAAATTGCGTCCAG+GGG - tig0016220:159585-159604 Msa1358020:intron 55.0%
TCCCCTGGACGCAATTTCCT+AGG + tig0016220:159589-159608 None:intergenic 55.0%
GGATTCGGATCAATCTCCCC+TGG + tig0016220:159604-159623 None:intergenic 55.0%
GCGACCCGATCCTGTTGATA+TGG - tig0016220:159639-159658 Msa1358020:intron 55.0%
TTCCGAAGCATGTGCTCGGT+TGG - tig0016220:159684-159703 Msa1358020:intron 55.0%
AGCCAACCGAGCACATGCTT+CGG + tig0016220:159689-159708 None:intergenic 55.0%
! GCTCGGTTGGCTAACACGAA+AGG - tig0016220:159697-159716 Msa1358020:intron 55.0%
AACAGCTTGAGGAAGCGAGG+AGG - tig0016220:159749-159768 Msa1358020:intron 55.0%
TAAGGCAGCGGAGGAGGAAA+AGG - tig0016220:159821-159840 Msa1358020:CDS 55.0%
AGCGGAGGAGGAAAAGGAGA+GGG - tig0016220:159827-159846 Msa1358020:CDS 55.0%
GTTTGAGAAGAGGCCTCCTC+TGG - tig0016220:159873-159892 Msa1358020:CDS 55.0%
TGCTGATGAGGATAGGGAGG+TGG - tig0016220:159909-159928 Msa1358020:CDS 55.0%
TGGCATGCAGAATAGCAGCC+GGG + tig0016220:160053-160072 None:intergenic 55.0%
ATCGCTGCCCACAAGGTCAA+TGG + tig0016220:160181-160200 None:intergenic 55.0%
TGAGTTCATCGCTGCCCACA+AGG + tig0016220:160188-160207 None:intergenic 55.0%
ACGAGTAGCACTGCTGCCTT+CGG + tig0016220:160211-160230 None:intergenic 55.0%
!! ATGGCTTGGTTGGGTGTCTG+TGG + tig0016220:160252-160271 None:intergenic 55.0%
GGGTTCTCTCCTCCTAACAG+TGG + tig0016220:160372-160391 None:intergenic 55.0%
TTGCAGAGGGAGTCAGCAGT+GGG + tig0016220:160458-160477 None:intergenic 55.0%
AGTAAGGCCTGCACTTCCAG+GGG + tig0016220:160481-160500 None:intergenic 55.0%
GAGTAAGGCCTGCACTTCCA+GGG + tig0016220:160482-160501 None:intergenic 55.0%
TCCGAAGGGAACTCCTCTCA+GGG - tig0016220:160551-160570 Msa1358020:CDS 55.0%
TCCCTGAGAGGAGTTCCCTT+CGG + tig0016220:160555-160574 None:intergenic 55.0%
AGAAGATGCTGAAGAGCCCG+AGG - tig0016220:160725-160744 Msa1358020:CDS 55.0%
GCCCGAGGAGAAGATTGAAG+AGG - tig0016220:160740-160759 Msa1358020:CDS 55.0%
! AGAAGAAGAGGCACGGCAGA+AGG - tig0016220:160794-160813 Msa1358020:CDS 55.0%
ATAAGCTCCAGAGATGCGGG+AGG + tig0016220:160870-160889 None:intergenic 55.0%
GCTTGCTCAATAGGGGTTGG+TGG + tig0016220:160939-160958 None:intergenic 55.0%
! TCGGCTTGCTCAATAGGGGT+TGG + tig0016220:160942-160961 None:intergenic 55.0%
!! CTCGTCGGCTTGCTCAATAG+GGG + tig0016220:160946-160965 None:intergenic 55.0%
! AGGCCCATTTGCTGCTCGTT+TGG + tig0016220:161060-161079 None:intergenic 55.0%
! GGCTGAGTGGACTCGAGAAG+AGG - tig0016220:159390-159409 Msa1358020:intron 60.0%
CAGCGGAGGAGGAAAAGGAG+AGG - tig0016220:159826-159845 Msa1358020:CDS 60.0%
TGCAGAGAGGCAAGATGCCC+CGG - tig0016220:160032-160051 Msa1358020:CDS 60.0%
GGCATGCAGAATAGCAGCCG+GGG + tig0016220:160052-160071 None:intergenic 60.0%
GGCAGCGATGAACTCACCGA+AGG - tig0016220:160192-160211 Msa1358020:CDS 60.0%
! TGTCTGAGACTCCCTCAGCC+TGG + tig0016220:160349-160368 None:intergenic 60.0%
GAGGGAGTCAGCAGTGGGAT+TGG + tig0016220:160453-160472 None:intergenic 60.0%
GTTGCAGAGGGAGTCAGCAG+TGG + tig0016220:160459-160478 None:intergenic 60.0%
GCACTTCCAGGGGTTGCAGA+GGG + tig0016220:160471-160490 None:intergenic 60.0%
TGCACTTCCAGGGGTTGCAG+AGG + tig0016220:160472-160491 None:intergenic 60.0%
! TCTGCAACCCCTGGAAGTGC+AGG - tig0016220:160471-160490 Msa1358020:CDS 60.0%
GGAGTAAGGCCTGCACTTCC+AGG + tig0016220:160483-160502 None:intergenic 60.0%
GCAGGCCTTACTCCCAGAAG+TGG - tig0016220:160489-160508 Msa1358020:CDS 60.0%
TCCCAGAAGTGGTATGGCGC+CGG - tig0016220:160500-160519 Msa1358020:CDS 60.0%
!! AAGTGGTATGGCGCCGGCAA+GGG - tig0016220:160506-160525 Msa1358020:CDS 60.0%
CTCCGAAGGGAACTCCTCTC+AGG - tig0016220:160550-160569 Msa1358020:CDS 60.0%
GGTCGCGCAGGCTTCGATTC+AGG + tig0016220:159625-159644 None:intergenic 65.0%
TCAACAGGATCGGGTCGCGC+AGG + tig0016220:159637-159656 None:intergenic 65.0%
CTGACTCCCTCTGCAACCCC+TGG - tig0016220:160462-160481 Msa1358020:CDS 65.0%
GCCGGCGCCATACCACTTCT+GGG + tig0016220:160504-160523 None:intergenic 65.0%
TGCCGGCGCCATACCACTTC+TGG + tig0016220:160505-160524 None:intergenic 65.0%
!! GAAGTGGTATGGCGCCGGCA+AGG - tig0016220:160505-160524 Msa1358020:CDS 65.0%
AGAGATGCGGGAGGAGGCCT+AGG + tig0016220:160861-160880 None:intergenic 65.0%
TAGGCCTCCTCCCGCATCTC+TGG - tig0016220:160860-160879 Msa1358020:CDS 65.0%
AGCTCCAGAGATGCGGGAGG+AGG + tig0016220:160867-160886 None:intergenic 65.0%
CGCCGCTGTCACCAAACCGC+AGG - tig0016220:158655-158674 Msa1358020:three_prime_UTR 70.0%
!! GGTATGGCGCCGGCAAGGGA+TGG - tig0016220:160510-160529 Msa1358020:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0016220 gene 158557 162327 158557 ID=Msa1358020;Name=Msa1358020
tig0016220 mRNA 158557 162327 158557 ID=Msa1358020-mRNA-1;Parent=Msa1358020;Name=Msa1358020-mRNA-1;_AED=0.04;_eAED=0.04;_QI=196|1|1|1|0.5|0.33|3|317|707
tig0016220 exon 158557 159098 158557 ID=Msa1358020-mRNA-1:exon:10608;Parent=Msa1358020-mRNA-1
tig0016220 exon 159760 161734 159760 ID=Msa1358020-mRNA-1:exon:10607;Parent=Msa1358020-mRNA-1
tig0016220 exon 162208 162327 162208 ID=Msa1358020-mRNA-1:exon:10606;Parent=Msa1358020-mRNA-1
tig0016220 five_prime_UTR 162208 162327 162208 ID=Msa1358020-mRNA-1:five_prime_utr;Parent=Msa1358020-mRNA-1
tig0016220 five_prime_UTR 161659 161734 161659 ID=Msa1358020-mRNA-1:five_prime_utr;Parent=Msa1358020-mRNA-1
tig0016220 CDS 159760 161658 159760 ID=Msa1358020-mRNA-1:cds;Parent=Msa1358020-mRNA-1
tig0016220 CDS 158874 159098 158874 ID=Msa1358020-mRNA-1:cds;Parent=Msa1358020-mRNA-1
tig0016220 three_prime_UTR 158557 158873 158557 ID=Msa1358020-mRNA-1:three_prime_utr;Parent=Msa1358020-mRNA-1
Gene Sequence

>Msa1358020

ATGAGCATAGGTGTTTGGAAAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCATATCTCGTCCCTACTCGTTTGCAAATCTGCAAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGGCTGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTACGCCTACTCAGTGGAGAACCATTAGTTGGAGAACCATTAGTGCTACCATTGTGGGTCGTACTCCTTCGCAGTGTCTTGAACGGTATGAGAAACTCCTTGACGCCGCTTGTGTTAAGGACGATAACTATGAACCTGGTGATGACCCTAGGAAATTGCGTCCAGGGGAGATTGATCCGAATCCTGAATCGAAGCCTGCGCGACCCGATCCTGTTGATATGGATGAGTATGAGAAGGAGATGCTTTCCGAAGCATGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTTGCTTCTTTACAGAAAAAGAGAGAATTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCTGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCATGCATTCCCTACTACTATAGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAGGCTCAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCGGCTGCTATTCTGCATGCCAAGAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCGAAACTGATGCTTCCACCACCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCATTGACCTTGTGGGCAGCGATGAACTCACCGAAGGCAGCAGTGCTACTCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCATGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTAGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACATTCCAATCCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGGCGCCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATAGTGCTAGACTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGCTGAAGAGCCCGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGAAGGCATTACTTAGAAAACGATCAAAAGTCATTCAAAGGGAACTTCCTAGGCCTCCTCCCGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTGGAGCATGACAATGCTAAGTATCCGCTTGAGGAGATAGCAAATAAGGAGAGAGAGAAAGGATCCAAACGAGCAGCAAATGGGCCTGCTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGCTGATCAGTTGATAAAAGATGAAGCCCAGTATCTTCGTGAGGCAATGGGGTATGAAAATGATTCCCTCGAGGATTTTGTTGAAGCACATACAACATGCATTAATGATTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGATGGGAAGGAGAAGATGATTCGACTTGAGAAGAAGGTTACATTACTCACGCAAGGGTACGAGTTATGCTACTGCTAA
Protein sequence

>Msa1358020

MSIGVWKNTEDEILKAAVMKYGKNQWAHISSLLVCKSAKQCKARWYEWLDPSIKKAEWTREEDEKLLHLAKLTPTQWRTISWRTISATIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEYEKEMLSEACARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPLGYFDVADEDREVEQHAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHAKKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYAIDLVGSDELTEGSSATRALLPNYPQTPNQAMTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHIPIPLLTPSATPGSAGLTPRSGMAPARDGFSFGMTPKGTPLRDELHINEDMEMRDSARLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQKALLRKRSKVIQRELPRPPPASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKEREKGSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGYENDSLEDFVEAHTTCINDLQNEFENVRSKLDDGKEKMIRLEKKVTLLTQGYELCYC*