AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358990


Find 306 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
tig0016604 gene 71605 78667 71605 ID=Msa1358990;Name=Msa1358990
tig0016604 mRNA 71605 78667 71605 ID=Msa1358990-mRNA-1;Parent=Msa1358990;Name=Msa1358990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=121|1|1|1|0.96|1|26|16|1133
tig0016604 exon 71605 71667 71605 ID=Msa1358990-mRNA-1:exon:11123;Parent=Msa1358990-mRNA-1
tig0016604 exon 72007 72144 72007 ID=Msa1358990-mRNA-1:exon:11124;Parent=Msa1358990-mRNA-1
tig0016604 exon 72274 72453 72274 ID=Msa1358990-mRNA-1:exon:11125;Parent=Msa1358990-mRNA-1
tig0016604 exon 72576 72689 72576 ID=Msa1358990-mRNA-1:exon:11126;Parent=Msa1358990-mRNA-1
tig0016604 exon 72780 72938 72780 ID=Msa1358990-mRNA-1:exon:11127;Parent=Msa1358990-mRNA-1
tig0016604 exon 73324 73501 73324 ID=Msa1358990-mRNA-1:exon:11128;Parent=Msa1358990-mRNA-1
tig0016604 exon 73600 73732 73600 ID=Msa1358990-mRNA-1:exon:11129;Parent=Msa1358990-mRNA-1
tig0016604 exon 73882 73991 73882 ID=Msa1358990-mRNA-1:exon:11130;Parent=Msa1358990-mRNA-1
tig0016604 exon 74101 74266 74101 ID=Msa1358990-mRNA-1:exon:11131;Parent=Msa1358990-mRNA-1
tig0016604 exon 74381 74490 74381 ID=Msa1358990-mRNA-1:exon:11132;Parent=Msa1358990-mRNA-1
tig0016604 exon 74603 74672 74603 ID=Msa1358990-mRNA-1:exon:11133;Parent=Msa1358990-mRNA-1
tig0016604 exon 74783 74856 74783 ID=Msa1358990-mRNA-1:exon:11134;Parent=Msa1358990-mRNA-1
tig0016604 exon 74953 75048 74953 ID=Msa1358990-mRNA-1:exon:11135;Parent=Msa1358990-mRNA-1
tig0016604 exon 75131 75226 75131 ID=Msa1358990-mRNA-1:exon:11136;Parent=Msa1358990-mRNA-1
tig0016604 exon 75418 75545 75418 ID=Msa1358990-mRNA-1:exon:11137;Parent=Msa1358990-mRNA-1
tig0016604 exon 75664 75898 75664 ID=Msa1358990-mRNA-1:exon:11138;Parent=Msa1358990-mRNA-1
tig0016604 exon 75980 76141 75980 ID=Msa1358990-mRNA-1:exon:11139;Parent=Msa1358990-mRNA-1
tig0016604 exon 76215 76301 76215 ID=Msa1358990-mRNA-1:exon:11140;Parent=Msa1358990-mRNA-1
tig0016604 exon 76533 76679 76533 ID=Msa1358990-mRNA-1:exon:11141;Parent=Msa1358990-mRNA-1
tig0016604 exon 76919 77029 76919 ID=Msa1358990-mRNA-1:exon:11142;Parent=Msa1358990-mRNA-1
tig0016604 exon 77137 77316 77137 ID=Msa1358990-mRNA-1:exon:11143;Parent=Msa1358990-mRNA-1
tig0016604 exon 77398 77526 77398 ID=Msa1358990-mRNA-1:exon:11144;Parent=Msa1358990-mRNA-1
tig0016604 exon 77610 77705 77610 ID=Msa1358990-mRNA-1:exon:11145;Parent=Msa1358990-mRNA-1
tig0016604 exon 77880 78068 77880 ID=Msa1358990-mRNA-1:exon:11146;Parent=Msa1358990-mRNA-1
tig0016604 exon 78151 78317 78151 ID=Msa1358990-mRNA-1:exon:11147;Parent=Msa1358990-mRNA-1
tig0016604 exon 78447 78667 78447 ID=Msa1358990-mRNA-1:exon:11148;Parent=Msa1358990-mRNA-1
tig0016604 five_prime_UTR 71605 71667 71605 ID=Msa1358990-mRNA-1:five_prime_utr;Parent=Msa1358990-mRNA-1
tig0016604 five_prime_UTR 72007 72064 72007 ID=Msa1358990-mRNA-1:five_prime_utr;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72065 72144 72065 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72274 72453 72274 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72576 72689 72576 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72780 72938 72780 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 73324 73501 73324 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 73600 73732 73600 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 73882 73991 73882 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74101 74266 74101 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74381 74490 74381 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74603 74672 74603 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74783 74856 74783 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74953 75048 74953 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75131 75226 75131 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75418 75545 75418 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75664 75898 75664 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75980 76141 75980 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 76215 76301 76215 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 76533 76679 76533 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 76919 77029 76919 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77137 77316 77137 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77398 77526 77398 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77610 77705 77610 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77880 78068 77880 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 78151 78317 78151 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 78447 78651 78447 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 three_prime_UTR 78652 78667 78652 ID=Msa1358990-mRNA-1:three_prime_utr;Parent=Msa1358990-mRNA-1
Gene Sequence

>Msa1358990

ATGTCATCTCTCAGTAGGGAGTTGGTGTTCTTGATCTTGCAGTTTCTTGAGGAGGAAAAGTTCAAAGAGGCTGTTCATAAGCTTGAACAGGAATCAGGGTTTTACTTCAACATGAAGTACTTTGAAGATGAAGTGCATAATGGGAATTGGGATGAGGTTGAGAAGTACCTCTCTGGTTTCACTAAAGTTGATGATAATAGGTATTCTATGAAGATATTTTTCGAGATAAGGAAGCAGAAGTATCTCGAGGCATTGGACAAGCATGATCGGTCCAAGGGTGTCGAAATACTAGTGAAGGATTTGAAAGTGTTTTCTACATTTAATGAAGAGTTGTTCAAGGAGATCACACAGCTTTTAACACTGGAGAATTTTAGGGAAAATGAACAATTGTCCAAGTATGGTGATACGAAGTCTGCGAGAGCAATCATGTTGGTTGAACTCAAAAAGTTGATTGAGGCAAATCCCTTATTTCGCGACAAATTGCAATTTCCCAACCTTAAGAACTCAAGGTTGCGAACTCTCATCAATCAAAGCTTGAATTGGCAGCATCAACTTTGTAAGAATCCACGGCCAAATCCAGATATAAAAACTCTTTTTGTGGATCACTCTTGTGGACAACCAAATGGTGCACGGGCTCCATCACCTGCTAATATGCCGCTACTAGGATCCTTGCCAAAGGTTGGAGGGTTTCCTCCTCTTGGTGCACATGGGCCTTTTCAGCCAACTCCAGCACCTGTGCCAATGCCGCTGGCTGGTTGGATGTCAAATCCTACTACCGTGGCACATCCATCAGTTTCTGGAGGAGGAGCTATAGGTCTTGGTGTTGGTGGACCTTCAATGCCCGCTGCTTTGAAGCATCCTAGGACACCTCCAACTAATCCTTCTGTTGACTACCCATCTGGGGATTCAGATCACATTTCTAAGAGAACAAGACCAATAGGAATGTCTGATGAGGGAAATCTACCTGTTAATGTTTTGTCAGCGACGTTTCCGGGTCATGGTCATGGCCAGGCTTTTAATTCACCGGATGACTTGCCAAAGACAGTCTTGCGAACTCTAAATCAAGGCTCTTCTCCTATGAGCATGGACTTCCATCCAGTTCAACAGACTTTACTTCTTGTTGGTACAAATGTGGCAGACATTGGTTTATGGGAATTGGGCTCTAGGGAACGGTTGGTCTTAAGGAACTTCAAAGTTTGGGATCTGAGTGCTTGTTCAATGCCATTTCAGGCTGCTCTTGTCAAAGATCCAGCTGTTTCTGTCAACCGTGTGACTTGGAGTCCAGACGGGGCTTTGTTCGGAGTTGCTTATTCAAGGCACATTGTTCAGATATACTCTTACCATGGTGGGGATGAAGTACGACAGCACTTGGAGATTGATGCCCATGTTGGCGGAGTAAATGATCTAGCATTTTCTCACCCAAATAAGCAGCTATGCGTGATCACCTGTGGTGATGATAAAACTATTAAGGTGTGGGATGCTGCAACCGGTATAAAACAGTACACTTTTGAAGGTCATGAGGCTCCCGTTTATTCTGTCTGCCCACATTATAAAGAAAACATTCAGTTCATCTTTTCAACGGCATTAGATGGAAAGATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGATTATGATGCTCCTGGTCGGTGGTGTACAACCATGGCTTATAGTGCTGATGGTACAAGGCTCTTTTCATGTGGGACTAGCAAGGATGGGGAATCCTCTATTGTTGAATGGAATGAAAGTGAAGGAGCTGTGAAAAGGACATACCAAGGATTTCGGAAGCGATCTTTGGGTGTTGTACAATTTGATACGACCAAAAATCGGTATCTGGCTGCTGGTGATGATTTCTCCATTAAATTTTGGGATATGGACAATATCCAGCTTTTGACAACTGTTGATGCTGATGGGGGTCTCCCGGCAAGCCCACGCATCCGTTTCAATAAGGAAGGATCTCTTTTAGCTGTCTCTGCAAATGAGAATGGAATTAAAATCTTGGCCAATGGAGATGGTGTTCGTTTGTTGCGCTCGTTAGAGAATTCCTCATATGATGCATCAAGAACACCAGAAACCATGACAAAGCCTATAATAAATCCCATGTCAGTTGCTACTGCTGCAACTAGTGCTGCACTTGAGAGAGCCTCGTCTGTGGCAGCTATTACTGGAATGAATGGGGATGCCCGGAACTTAGGTGATATTAAACCTAGAATAAGTGAAGAATCCAATGACAAGTCAAAGATATGGAAGCTCACTGAAATCAATGAACCGTCTCATTGTAGATCCTTGAAGCTACCTGAGAATGCAAGAGTCACAAAGATATCGAGGTTGATATATACTAATTCAGGTAATGCTATTCTGGCATTAGCTTCAAATGCCATTCATCTTCTCTGGAAGTGGCAACGAAATGATCGCAATTCATCCGGCAAGGCCACTGCTAGTGTGCCACCTCAGTTGTGGCAACCTTCAAGTGGCATCCTGATGACTAATGACGTTAATGATAACAATACTGAGGATGCAGTCCCATGCTTTGCTCTTTCCAAAAATGATTCTTACGTAATGTCGGCATCGGGTGGGAAGATTTCTCTGTTCAATATGATGACTTTTAAGACAATGACAACGTTCATGCCACCACCACCTGCGGCAACCTTTCTAGCTTTCCATCCTCAAGATAACAATATTATTGCTATAGGCATGGATGATTCTTCCATTCAGATATATAATGTCCGCGTAGATGAGGTTAAAAGTAAACTCAAAGGCCATACTAAAAGAATAACTGGTCTTGCATTTTCTCATGTACTGAATGTGCTAGTTTCATCTGGGGCAGATGGTCAGATTTTTGTATGGAATACTGATGGGTGGGAGAAGCAGAAGAATAGATTCTTGCAATTTCCTGCTGGGAGGACTCCACCTGCACAGGCAGATACACGGGTACAATTTCATCAGGATCAGTTCCGCTTCTTGGTGGTACATGAAACTCAGCTTGCCATTTATGAAGCAACAAAACTGGAATGTTTAAAGCAGTGGTTCCCGCGAGATGCTGCTGCACCAATATCACATGCAACTTTCTCATGTGATAGCAACTTGATATTTGCCAGCTTTTTAGATGCAACAATCTGTGTGTTCAGTGCTTCAAACCTTCGATTGCGATGCCGTATCAATCCTTCTGCTTATCTTTCCGCAAATGTCAGTTCTAACATTCAACCGCTCGTAATTGCTGCACATCCACACGAACCAAATCAGTTTGCTGTTGGACTGTCAGATGGCATAGTTCATGTGTTTGAGCCCCTTGAGTCTGAAGGCAAGTGGGGTGTGCCTCCACCTATTGAGAATGGCTCAGCAAGCAATGCGGTAGCTAATTCGGTTGGTGCTTCTTCTGATGAAGTCCAAAGATGA

Protein sequence

>Msa1358990

MSSLSRELVFLILQFLEEEKFKEAVHKLEQESGFYFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKGVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANMPLLGSLPKVGGFPPLGAHGPFQPTPAPVPMPLAGWMSNPTTVAHPSVSGGGAIGLGVGGPSMPAALKHPRTPPTNPSVDYPSGDSDHISKRTRPIGMSDEGNLPVNVLSATFPGHGHGQAFNSPDDLPKTVLRTLNQGSSPMSMDFHPVQQTLLLVGTNVADIGLWELGSRERLVLRNFKVWDLSACSMPFQAALVKDPAVSVNRVTWSPDGALFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGIKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDNIQLLTTVDADGGLPASPRIRFNKEGSLLAVSANENGIKILANGDGVRLLRSLENSSYDASRTPETMTKPIINPMSVATAATSAALERASSVAAITGMNGDARNLGDIKPRISEESNDKSKIWKLTEINEPSHCRSLKLPENARVTKISRLIYTNSGNAILALASNAIHLLWKWQRNDRNSSGKATASVPPQLWQPSSGILMTNDVNDNNTEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRITGLAFSHVLNVLVSSGADGQIFVWNTDGWEKQKNRFLQFPAGRTPPAQADTRVQFHQDQFRFLVVHETQLAIYEATKLECLKQWFPRDAAAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLSANVSSNIQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENGSASNAVANSVGASSDEVQR*