AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358990 MtrunA17_Chr2g0333311 99.294 1133 8 0 1 1133 1 1133 0.0 2345
Msa1358990 MtrunA17_Chr4g0003011 89.474 1140 110 7 1 1133 1 1137 0.0 2108
Msa1358990 MtrunA17_Chr4g0064101 74.173 1119 282 5 1 1114 1 1117 0.0 1748
Msa1358990 MtrunA17_Chr1g0192431 63.406 1145 390 14 1 1133 1 1128 0.0 1471
Msa1358990 MtrunA17_Chr7g0271991 63.708 1138 377 15 1 1123 1 1117 0.0 1457
Msa1358990 MtrunA17_Chr4g0067791 61.867 1146 400 18 1 1133 1 1122 0.0 1419
Msa1358990 MtrunA17_Chr2g0295251 47.327 767 356 12 343 1105 75 797 0.0 713
Msa1358990 MtrunA17_Chr2g0295351 37.453 801 385 19 343 1112 267 982 1.09e-165 516
Msa1358990 MtrunA17_Chr2g0295351 43.043 230 82 3 1 219 7 198 7.41e-48 186
Msa1358990 MtrunA17_Chr2g0310461 50.000 310 130 3 343 652 84 368 2.06e-98 317
Msa1358990 MtrunA17_Chr1g0149541 51.839 299 135 5 811 1105 3 296 1.89e-96 309
Msa1358990 MtrunA17_Chr2g0310451 42.188 256 110 6 28 273 4 231 9.52e-61 208
Msa1358990 MtrunA17_Chr1g0153401 50.289 173 86 0 8 180 10 182 3.27e-55 190
Msa1358990 MtrunA17_Chr2g0295261 46.479 213 87 5 70 279 1 189 9.35e-53 184
Msa1358990 MtrunA17_Chr2g0295281 38.421 190 88 3 343 522 80 250 1.41e-36 140
Msa1358990 MtrunA17_Chr6g0470281 86.957 69 9 0 178 246 58 126 8.10e-35 129
Msa1358990 MtrunA17_Chr1g0149531 52.809 89 42 0 88 176 22 110 1.04e-25 103
Msa1358990 MtrunA17_Chr6g0462661 73.077 52 12 1 472 521 7 58 2.21e-21 88.6
Msa1358990 MtrunA17_Chr2g0295291 47.253 91 36 1 87 177 22 100 8.10e-20 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358990 AT1G80490.3 82.250 1138 179 7 1 1133 1 1120 0.0 1959
Msa1358990 AT1G80490.2 82.250 1138 179 7 1 1133 1 1120 0.0 1959
Msa1358990 AT1G15750.3 82.296 1141 184 8 1 1133 1 1131 0.0 1956
Msa1358990 AT1G15750.1 82.296 1141 184 8 1 1133 1 1131 0.0 1956
Msa1358990 AT1G15750.2 82.296 1141 184 8 1 1133 1 1131 0.0 1956
Msa1358990 AT1G15750.4 82.296 1141 184 8 1 1133 1 1131 0.0 1956
Msa1358990 AT1G80490.1 82.162 1138 179 8 1 1133 1 1119 0.0 1953
Msa1358990 AT3G15880.1 69.538 1126 328 8 1 1116 1 1121 0.0 1644
Msa1358990 AT3G15880.4 69.538 1126 328 8 1 1116 1 1121 0.0 1644
Msa1358990 AT3G15880.2 69.538 1126 328 8 1 1116 1 1121 0.0 1644
Msa1358990 AT3G15880.3 68.739 1126 327 9 1 1116 1 1111 0.0 1615
Msa1358990 AT3G16830.1 63.701 1124 366 20 1 1107 1 1099 0.0 1433
Msa1358990 AT5G27030.1 61.888 1144 389 18 1 1133 1 1108 0.0 1411
Msa1358990 AT5G27030.2 60.513 1170 389 19 1 1133 1 1134 0.0 1394
Msa1358990 AT2G25420.1 39.037 374 214 9 752 1118 368 734 1.70e-71 254
Msa1358990 AT2G25420.1 39.130 161 97 1 6 166 9 168 3.24e-29 126
Msa1358990 AT2G25420.1 28.571 210 104 5 4 211 191 356 3.50e-19 94.0
Msa1358990 AT2G25420.4 38.624 378 211 10 755 1118 371 741 1.80e-70 251
Msa1358990 AT2G25420.4 39.130 161 97 1 6 166 9 168 3.59e-29 125
Msa1358990 AT2G25420.4 28.571 210 104 5 4 211 191 356 3.72e-19 94.0
Msa1358990 AT2G25420.3 37.304 319 190 7 755 1070 371 682 4.03e-56 208
Msa1358990 AT2G25420.3 39.130 161 97 1 6 166 9 168 8.33e-29 124
Msa1358990 AT2G25420.3 28.571 210 104 5 4 211 191 356 5.49e-19 93.2
Msa1358990 AT2G25420.2 36.810 326 189 8 755 1070 371 689 3.39e-55 205
Msa1358990 AT2G25420.2 39.130 161 97 1 6 166 9 168 8.52e-29 124
Msa1358990 AT2G25420.2 28.571 210 104 5 4 211 191 356 5.14e-19 93.2

Find 306 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACCTTTGTCATGGTTTC+TGG 0.049351 tig0016604:-76124 None:intergenic
ATGATTTCTCCATTAAATTT+TGG 0.087917 tig0016604:+75822 Msa1358990:CDS
AGCATGGTTGTATGACAATT+TGG 0.170852 tig0016604:+75453 Msa1358990:CDS
TTGCAATTTGTCGCGAAATA+AGG 0.183504 tig0016604:-72869 None:intergenic
ATCACGCATAGCTGCTTATT+TGG 0.190404 tig0016604:-74998 None:intergenic
ATGTGGCAGACATTGGTTTA+TGG 0.191004 tig0016604:+74390 Msa1358990:CDS
GTCCATATCCCAAAATTTAA+TGG 0.196144 tig0016604:-75831 None:intergenic
TTGGATTCTTCACTTATTCT+AGG 0.250662 tig0016604:-76566 None:intergenic
TGCTTGTTCAATGCCATTTC+AGG 0.256403 tig0016604:+74469 Msa1358990:CDS
TCAGGATCAGTTCCGCTTCT+TGG 0.276059 tig0016604:+77987 Msa1358990:CDS
TAATTCAGGTAATGCTATTC+TGG 0.278445 tig0016604:+76939 Msa1358990:CDS
AGAGTTCGCAAGACTGTCTT+TGG 0.280137 tig0016604:-74182 None:intergenic
AGACATTGGTTTATGGGAAT+TGG 0.280982 tig0016604:+74397 Msa1358990:CDS
AGGATTTCGGAAGCGATCTT+TGG 0.287369 tig0016604:+75751 Msa1358990:CDS
GTGGCACATCCATCAGTTTC+TGG 0.289471 tig0016604:+73666 Msa1358990:CDS
TCTTAAGGAACTTCAAAGTT+TGG 0.291087 tig0016604:+74438 Msa1358990:CDS
ACTGACATGGGATTTATTAT+AGG 0.296114 tig0016604:-76215 None:intergenic
CTGAATGTGCTAGTTTCATC+TGG 0.300977 tig0016604:+77670 Msa1358990:CDS
TGGTGATGATAAAACTATTA+AGG 0.303377 tig0016604:+75027 Msa1358990:CDS
GTTCAACAGACTTTACTTCT+TGG 0.308477 tig0016604:+74245 Msa1358990:CDS
TCACTAAAGTTGATGATAAT+AGG 0.310696 tig0016604:+72372 Msa1358990:CDS
GGCCATACTAAAAGAATAAC+TGG 0.314976 tig0016604:+77628 Msa1358990:CDS
TGCAATTTGTCGCGAAATAA+GGG 0.316525 tig0016604:-72868 None:intergenic
CTTAAGGAACTTCAAAGTTT+GGG 0.328520 tig0016604:+74439 Msa1358990:CDS
ATGAAGTGCATAATGGGAAT+TGG 0.330324 tig0016604:+72321 Msa1358990:CDS
AATAGGCTTGAACAGGAATC+AGG 0.341534 tig0016604:+72269 Msa1358990:intron
TCGTCTGTGGCAGCTATTAC+TGG 0.343379 tig0016604:+76275 Msa1358990:CDS
AATGAACAATTGTCCAAGTA+TGG 0.344972 tig0016604:+72784 Msa1358990:CDS
CTAGGGAACGGTTGGTCTTA+AGG 0.346259 tig0016604:+74423 Msa1358990:CDS
AGCGGCATTGGCACAGGTGC+TGG 0.347399 tig0016604:-73615 None:intergenic
TGTGGCAGACATTGGTTTAT+GGG 0.347766 tig0016604:+74391 Msa1358990:CDS
CCATATCTTTGACTTGTCAT+TGG 0.351700 tig0016604:-76585 None:intergenic
TTTCCTCCTCTTGGTGCACA+TGG 0.357436 tig0016604:+73478 Msa1358990:CDS
TTCGCAACCTTGAGTTCTTA+AGG 0.364400 tig0016604:-72900 None:intergenic
GACATTGGTTTATGGGAATT+GGG 0.365757 tig0016604:+74398 Msa1358990:CDS
AGGTTGATATATACTAATTC+AGG 0.366216 tig0016604:+76925 Msa1358990:CDS
CTTGCTGAGCCATTCTCAAT+AGG 0.369105 tig0016604:-78596 None:intergenic
CCCACGCATCCGTTTCAATA+AGG 0.369287 tig0016604:+75985 Msa1358990:CDS
GTAAAATAATAGGCTTGAAC+AGG 0.370416 tig0016604:+72262 Msa1358990:intron
ACCTCATCAGACATTCCTAT+TGG 0.377602 tig0016604:-73971 None:intergenic
GCATGGTTGTATGACAATTT+GGG 0.379921 tig0016604:+75454 Msa1358990:CDS
AACCTTGAGTTCTTAAGGTT+GGG 0.382232 tig0016604:-72895 None:intergenic
CCTTCTGTTGACTACCCATC+TGG 0.382526 tig0016604:+73917 Msa1358990:CDS
GATAACAATATTATTGCTAT+AGG 0.383840 tig0016604:+77458 Msa1358990:CDS
TTCATTCCATTCAACAATAG+AGG 0.384315 tig0016604:-75699 None:intergenic
TTTAATATCACCTAAGTTCC+GGG 0.388615 tig0016604:-76543 None:intergenic
AGTCCAACAGCAAACTGATT+TGG 0.390926 tig0016604:-78509 None:intergenic
CACTAGTATTTCGACACCCT+TGG 0.392756 tig0016604:-72587 None:intergenic
CAAATGCCATTCATCTTCTC+TGG 0.393392 tig0016604:+76971 Msa1358990:CDS
GTTGGAGGGTTTCCTCCTCT+TGG 0.395717 tig0016604:+73469 Msa1358990:CDS
TGCCAATGCCGCTGGCTGGT+TGG 0.395973 tig0016604:+73625 Msa1358990:CDS
CATTTATGAAGCAACAAAAC+TGG 0.398460 tig0016604:+78032 Msa1358990:CDS
GTTTAATATCACCTAAGTTC+CGG 0.401817 tig0016604:-76544 None:intergenic
TTTGAAGATGAAGTGCATAA+TGG 0.402276 tig0016604:+72314 Msa1358990:CDS
CCAATGACAAGTCAAAGATA+TGG 0.402964 tig0016604:+76585 Msa1358990:CDS
TCACGCATAGCTGCTTATTT+GGG 0.403737 tig0016604:-74997 None:intergenic
GAGAAAGTTGCATGTGATAT+TGG 0.405495 tig0016604:-78175 None:intergenic
AAAGGACATACCAAGGATTT+CGG 0.406182 tig0016604:+75738 Msa1358990:CDS
TTGAAGATGAAGTGCATAAT+GGG 0.407814 tig0016604:+72315 Msa1358990:CDS
TTCATCTGGGGCAGATGGTC+AGG 0.408080 tig0016604:+77684 Msa1358990:CDS
AAGCAATGCGGTAGCTAATT+CGG 0.409432 tig0016604:+78597 Msa1358990:CDS
AGAAGTAAAGTCTGTTGAAC+TGG 0.409751 tig0016604:-74242 None:intergenic
AATTAAATTACAGCTTGAAT+TGG 0.411195 tig0016604:+73311 Msa1358990:intron
GGATTTCGGAAGCGATCTTT+GGG 0.411202 tig0016604:+75752 Msa1358990:CDS
GTCGCTGACAAAACATTAAC+AGG 0.413117 tig0016604:-74110 None:intergenic
TTGACAACTGTTGATGCTGA+TGG 0.418531 tig0016604:+75866 Msa1358990:CDS
TCCGGGTCATGGTCATGGCC+AGG 0.419693 tig0016604:+74136 Msa1358990:CDS
CATTAACGTCATTAGTCATC+AGG 0.424581 tig0016604:-77184 None:intergenic
CAAGAAAGGACAACCTGAAA+TGG 0.425239 tig0016604:-74482 None:intergenic
CACATATTATCATACCTTGC+CGG 0.425601 tig0016604:-77022 None:intergenic
CTTGATCTTGCAGTTTCTTG+AGG 0.426093 tig0016604:+72094 Msa1358990:CDS
TCTAAGAGAACAAGACCAAT+AGG 0.427127 tig0016604:+73956 Msa1358990:CDS
ATGTGGGCAGACAGAATAAA+CGG 0.428344 tig0016604:-75186 None:intergenic
TTCCTCCTCTTGGTGCACAT+GGG 0.431467 tig0016604:+73479 Msa1358990:CDS
GATGGATGTGCCACGGTAGT+AGG 0.432914 tig0016604:-73657 None:intergenic
CCTGCTAATATGCCGCTACT+AGG 0.434461 tig0016604:+73433 Msa1358990:CDS
AGCACCTGTGCCAATGCCGC+TGG 0.436154 tig0016604:+73617 Msa1358990:CDS
CTTCTCACCTTGAAATCCTA+AGG 0.437178 tig0016604:-71653 None:intergenic
TTTGTGACTCTTGCATTCTC+AGG 0.437929 tig0016604:-76656 None:intergenic
TGACAACTGTTGATGCTGAT+GGG 0.439300 tig0016604:+75867 Msa1358990:CDS
TGCATTCTCAGGTAGCTTCA+AGG 0.439961 tig0016604:-76645 None:intergenic
GGAGGAAACCCTCCAACCTT+TGG 0.445438 tig0016604:-73463 None:intergenic
TGAGAATGGAATTAAAATCT+TGG 0.445832 tig0016604:+76036 Msa1358990:CDS
TGAAGTGCATAATGGGAATT+GGG 0.446193 tig0016604:+72322 Msa1358990:CDS
CCTGTGCCAATGCCGCTGGC+TGG 0.448719 tig0016604:+73621 Msa1358990:CDS
AGATTCTTGCAATTTCCTGC+TGG 0.449646 tig0016604:+77922 Msa1358990:CDS
GGAGGAGGAGCTATAGGTCT+TGG 0.449772 tig0016604:+73687 Msa1358990:CDS
AGTCCAGACGGGGCTTTGTT+CGG 0.450542 tig0016604:+74651 Msa1358990:CDS
CTTATCTTTCCGCAAATGTC+AGG 0.453300 tig0016604:+78296 Msa1358990:CDS
TTCATCTGATCCAAGACAAA+GGG 0.454032 tig0016604:+72036 Msa1358990:five_prime_UTR
CAACCTTGAGTTCTTAAGGT+TGG 0.454321 tig0016604:-72896 None:intergenic
ACATGGCAACCCCTTTGTCT+TGG 0.454455 tig0016604:-72046 None:intergenic
ATTTAATGAAGAGTTGTTCA+AGG 0.455292 tig0016604:+72633 Msa1358990:CDS
AAGCTGCTTTGAAGCATCCT+AGG 0.456942 tig0016604:+73879 Msa1358990:intron
GTTTCTGGAGGAGGAGCTAT+AGG 0.457345 tig0016604:+73681 Msa1358990:CDS
TAACCGAACAAAGCCCCGTC+TGG 0.460068 tig0016604:-74654 None:intergenic
AATATGGTACCGGGCATTGA+AGG 0.461655 tig0016604:-73720 None:intergenic
CTCATTAGAATGGGGATGCC+CGG 0.462018 tig0016604:+76525 Msa1358990:intron
GGATTAGTTGGAGGTGTCCT+AGG 0.462477 tig0016604:-73896 None:intergenic
AATGGGGATGCCCGGAACTT+AGG 0.464916 tig0016604:+76533 Msa1358990:CDS
GGTGCTGGAGTTGGCTGAAA+AGG 0.467018 tig0016604:-73600 None:intergenic
GAGATCCTTCCTTATTGAAA+CGG 0.467974 tig0016604:-75994 None:intergenic
GCTGTCTCTGCAAATGAGAA+TGG 0.468958 tig0016604:+76022 Msa1358990:CDS
TTTCTGTCAACCGTGTGACT+TGG 0.470077 tig0016604:+74628 Msa1358990:CDS
GCTATAGGTCTTGGTGTTGG+TGG 0.470485 tig0016604:+73696 Msa1358990:CDS
GATGGAGCCCGTGCACCATT+TGG 0.471195 tig0016604:-73409 None:intergenic
GTTTATGGGAATTGGGCTCT+AGG 0.471469 tig0016604:+74405 Msa1358990:CDS
TCAGCGACGTTTCCGGGTCA+TGG 0.475007 tig0016604:+74125 Msa1358990:CDS
AGAAAGGTTGCCGCAGGTGG+TGG 0.477176 tig0016604:-77419 None:intergenic
AAGGTTGCCGCAGGTGGTGG+TGG 0.477629 tig0016604:-77416 None:intergenic
TTGCCATGTCATCTCTCAGT+AGG 0.480049 tig0016604:+72060 Msa1358990:exon
TCCTCCTCTTGGTGCACATG+GGG 0.480599 tig0016604:+73480 Msa1358990:CDS
AAACAGGAGTTGCTTATTCA+AGG 0.482442 tig0016604:+74777 Msa1358990:intron
TAGATTGATGCCCATGTTGG+CGG 0.482559 tig0016604:+74950 Msa1358990:intron
GGATGGAAGTCCATGCTCAT+AGG 0.484071 tig0016604:-74221 None:intergenic
CCATTCATCTTCTCTGGAAG+TGG 0.484144 tig0016604:+76977 Msa1358990:CDS
ACTGTCTTTGGCAAGTCATC+CGG 0.486010 tig0016604:-74170 None:intergenic
CGAAATGATCGCAATTCATC+CGG 0.488548 tig0016604:+77003 Msa1358990:CDS
CACTCTTGTGGACAACCAAA+TGG 0.490147 tig0016604:+73394 Msa1358990:CDS
CTAGTTTCATCTGGGGCAGA+TGG 0.490316 tig0016604:+77679 Msa1358990:CDS
TCTTACGTAATGTCGGCATC+GGG 0.492136 tig0016604:+77257 Msa1358990:CDS
TACGTAATGTCGGCATCGGG+TGG 0.492756 tig0016604:+77260 Msa1358990:CDS
GTCATCAGGATGCCACTTGA+AGG 0.493491 tig0016604:-77170 None:intergenic
ATCCAACCAGCCAGCGGCAT+TGG 0.493632 tig0016604:-73627 None:intergenic
CATCAACAGTTGTCAAAAGC+TGG 0.493799 tig0016604:-75859 None:intergenic
GAACCAAATCAGTTTGCTGT+TGG 0.499579 tig0016604:+78487 Msa1358990:CDS
TAATATTGTTATCTTGAGGA+TGG 0.500349 tig0016604:-77448 None:intergenic
TTGAGGATGGAAAGCTAGAA+AGG 0.502387 tig0016604:-77435 None:intergenic
CCTAGTAGCGGCATATTAGC+AGG 0.506765 tig0016604:-73433 None:intergenic
TTCCCAACCTTAAGAACTCA+AGG 0.506767 tig0016604:+72893 Msa1358990:CDS
GATTCTTGCAATTTCCTGCT+GGG 0.506781 tig0016604:+77923 Msa1358990:CDS
TTTATGGGAATTGGGCTCTA+GGG 0.508717 tig0016604:+74406 Msa1358990:CDS
TGGGAGGACTCCACCTGCAC+AGG 0.509164 tig0016604:+77942 Msa1358990:CDS
GGATCCTTGCCAAAGGTTGG+AGG 0.510961 tig0016604:+73454 Msa1358990:CDS
TACACGGGTACAATTTCATC+AGG 0.511842 tig0016604:+77969 Msa1358990:CDS
CTAGGATCCTTGCCAAAGGT+TGG 0.512295 tig0016604:+73451 Msa1358990:CDS
AAAACTGGAATGTTTAAAGC+AGG 0.513670 tig0016604:+78047 Msa1358990:CDS
GGGAATTGGGCTCTAGGGAA+CGG 0.514295 tig0016604:+74411 Msa1358990:CDS
CTTCTGTTGACTACCCATCT+GGG 0.514403 tig0016604:+73918 Msa1358990:CDS
TAGTCAACAGAAGGATTAGT+TGG 0.515083 tig0016604:-73908 None:intergenic
CCAGCCAGCGGCATTGGCAC+AGG 0.515270 tig0016604:-73621 None:intergenic
TTTATATCTGGATTTGGCCG+TGG 0.516685 tig0016604:-73355 None:intergenic
GTGTGACTTGGAGTCCAGAC+GGG 0.517501 tig0016604:+74640 Msa1358990:CDS
GAGGTTGAGAAGTACCTCTC+TGG 0.517841 tig0016604:+72347 Msa1358990:CDS
GCAGAAGTATCTCGAGGCAT+TGG 0.518556 tig0016604:+72427 Msa1358990:CDS
TTCTAGATTGATGCCCATGT+TGG 0.518641 tig0016604:+74947 Msa1358990:intron
TTCTTACGTAATGTCGGCAT+CGG 0.518646 tig0016604:+77256 Msa1358990:CDS
GGATCAGTTCCGCTTCTTGG+TGG 0.519780 tig0016604:+77990 Msa1358990:CDS
GGATGAAGTACGACAGCACT+TGG 0.521704 tig0016604:+74832 Msa1358990:CDS
TGTGGCAGCTATTACTGGAA+TGG 0.523060 tig0016604:+76280 Msa1358990:CDS
AGACTTCGTATCACCATACT+TGG 0.523091 tig0016604:-72797 None:intergenic
GGTACAAATGTGGCAGACAT+TGG 0.523205 tig0016604:+74383 Msa1358990:CDS
GTCATCTCTCAGTAGGGAGT+TGG 0.523496 tig0016604:+72067 Msa1358990:CDS
AAGGTGTGGGATGCTGCAAC+CGG 0.524189 tig0016604:+75128 Msa1358990:intron
GGGAATCCTCTATTGTTGAA+TGG 0.526187 tig0016604:+75693 Msa1358990:CDS
GTGCCTCCACCTATTGAGAA+TGG 0.526497 tig0016604:+78568 Msa1358990:CDS
GTAAAGTCTGTTGAACTGGA+TGG 0.526769 tig0016604:-74238 None:intergenic
CTTATAGTGCTGATGGTACA+AGG 0.527119 tig0016604:+75524 Msa1358990:CDS
TCCTTATTGAAACGGATGCG+TGG 0.527625 tig0016604:-75986 None:intergenic
ACGTTTCCGGGTCATGGTCA+TGG 0.530237 tig0016604:+74131 Msa1358990:CDS
ACCCGTGTATCTGCCTGTGC+AGG 0.531929 tig0016604:-77955 None:intergenic
ATTGGCACAGGTGCTGGAGT+TGG 0.532674 tig0016604:-73609 None:intergenic
GACAACTGTTGATGCTGATG+GGG 0.533126 tig0016604:+75868 Msa1358990:CDS
AGATATACTCTTACCATGGT+GGG 0.533804 tig0016604:+74810 Msa1358990:CDS
GATCCTTGCCAAAGGTTGGA+GGG 0.535297 tig0016604:+73455 Msa1358990:CDS
CTACAAGTCTACCTTTGTCA+TGG 0.538287 tig0016604:-76131 None:intergenic
AAAATCTTGGCCAATGGAGA+TGG 0.538555 tig0016604:+76049 Msa1358990:CDS
TCATGTGGGACTAGCAAGGA+TGG 0.538912 tig0016604:+75671 Msa1358990:CDS
AAAGTGAAGGAGCTGTGAAA+AGG 0.539015 tig0016604:+75720 Msa1358990:CDS
ACATTATAAAGAAAACATTC+AGG 0.540359 tig0016604:+75205 Msa1358990:CDS
CGCATCCGTTTCAATAAGGA+AGG 0.540788 tig0016604:+75989 Msa1358990:CDS
TTGTAGGCATGATCGGTCCA+AGG 0.541396 tig0016604:+72570 Msa1358990:intron
CCCACTTGCCTTCAGACTCA+AGG 0.542684 tig0016604:-78562 None:intergenic
GTGTCATTACCTGACATTTG+CGG 0.542985 tig0016604:-78305 None:intergenic
GTCTTGCGAACTCTAAATCA+AGG 0.546763 tig0016604:+74191 Msa1358990:CDS
GATCATTTACTCCGCCAACA+TGG 0.547140 tig0016604:-74961 None:intergenic
GCAATAATATTGTTATCTTG+AGG 0.547205 tig0016604:-77452 None:intergenic
TGAATGTGCTAGTTTCATCT+GGG 0.547721 tig0016604:+77671 Msa1358990:CDS
GCAGGTGGAGTCCTCCCAGC+AGG 0.549064 tig0016604:-77937 None:intergenic
CGTGTTGATTATGATGCTCC+TGG 0.549370 tig0016604:+75481 Msa1358990:CDS
ATCATTTACTCCGCCAACAT+GGG 0.549862 tig0016604:-74960 None:intergenic
TTTGCTGTTGGACTGTCAGA+TGG 0.550194 tig0016604:+78499 Msa1358990:CDS
CCACTTCCAGAGAAGATGAA+TGG 0.550382 tig0016604:-76977 None:intergenic
CATCCATCAGTTTCTGGAGG+AGG 0.551695 tig0016604:+73672 Msa1358990:CDS
GCGGACATTATATATCTGAA+TGG 0.552985 tig0016604:-77495 None:intergenic
TGATACGGCATCGCAATCGA+AGG 0.553315 tig0016604:-78264 None:intergenic
CAATATTATTGCTATAGGCA+TGG 0.554389 tig0016604:+77463 Msa1358990:CDS
AAATGATTCTTACGTAATGT+CGG 0.554857 tig0016604:+77250 Msa1358990:CDS
TGCCATGTCATCTCTCAGTA+GGG 0.555154 tig0016604:+72061 Msa1358990:exon
GCTCCTCCTCCAGAAACTGA+TGG 0.556151 tig0016604:-73675 None:intergenic
CCTTATTGAAACGGATGCGT+GGG 0.556712 tig0016604:-75985 None:intergenic
CACCTGCACAGGCAGATACA+CGG 0.558462 tig0016604:+77953 Msa1358990:CDS
GGAATTAAAATCTTGGCCAA+TGG 0.559041 tig0016604:+76043 Msa1358990:CDS
TGTGGGCAGACAGAATAAAC+GGG 0.560237 tig0016604:-75185 None:intergenic
CATGTGGGACTAGCAAGGAT+GGG 0.560830 tig0016604:+75672 Msa1358990:CDS
CCCTTGAGTCTGAAGGCAAG+TGG 0.563846 tig0016604:+78542 Msa1358990:CDS
TGTATGGAATACTGATGGGT+GGG 0.564138 tig0016604:+77885 Msa1358990:CDS
AGCGGCATATTAGCAGGTGA+TGG 0.564502 tig0016604:-73427 None:intergenic
GGAGCTATAGGTCTTGGTGT+TGG 0.565862 tig0016604:+73693 Msa1358990:CDS
GTGGACAACCAAATGGTGCA+CGG 0.566954 tig0016604:+73401 Msa1358990:CDS
GGGTGTCGAAATACTAGTGA+AGG 0.567387 tig0016604:+72591 Msa1358990:CDS
TTGGTCTTGGTCTTGTGAAG+TGG 0.568945 tig0016604:+71596 None:intergenic
CTTGAGTCTGAAGGCAAGTG+GGG 0.568985 tig0016604:+78544 Msa1358990:CDS
ACGTAATGTCGGCATCGGGT+GGG 0.569698 tig0016604:+77261 Msa1358990:CDS
TGGACAACCAAATGGTGCAC+GGG 0.570211 tig0016604:+73402 Msa1358990:CDS
GTTCAGATATACTCTTACCA+TGG 0.570969 tig0016604:+74806 Msa1358990:CDS
ATCAACTTTGTAAGAATCCA+CGG 0.573332 tig0016604:+73338 Msa1358990:CDS
CCACTTGCCTTCAGACTCAA+GGG 0.574878 tig0016604:-78561 None:intergenic
CGTGTATCTGCCTGTGCAGG+TGG 0.576717 tig0016604:-77952 None:intergenic
CAAACGAACACCATCTCCAT+TGG 0.576743 tig0016604:-76059 None:intergenic
AAGATCGCTTCCGAAATCCT+TGG 0.577379 tig0016604:-75748 None:intergenic
CATCCGGTGAATTAAAAGCC+TGG 0.579441 tig0016604:-74154 None:intergenic
GATCTTGCAGTTTCTTGAGG+AGG 0.580065 tig0016604:+72097 Msa1358990:CDS
ATTGGGCTCTAGGGAACGGT+TGG 0.580282 tig0016604:+74415 Msa1358990:CDS
AGGCTCTTCTCCTATGAGCA+TGG 0.581418 tig0016604:+74211 Msa1358990:CDS
CCTTGAGTCTGAAGGCAAGT+GGG 0.583616 tig0016604:+78543 Msa1358990:CDS
CTCCCTACTGAGAGATGACA+TGG 0.584173 tig0016604:-72063 None:intergenic
TGTTCTTGATGCATCATATG+AGG 0.584269 tig0016604:-76101 None:intergenic
AAAAGCTTCAAACATGGAGA+AGG 0.584449 tig0016604:-71629 None:intergenic
ACACGGTTGACAGAAACAGC+TGG 0.584813 tig0016604:-74621 None:intergenic
GCTAGAAAGGTTGCCGCAGG+TGG 0.585297 tig0016604:-77422 None:intergenic
CAGGTTAAAAGTAAACTCAA+AGG 0.586719 tig0016604:+77607 Msa1358990:intron
GATAAGCAGAAGGATTGATA+CGG 0.587631 tig0016604:-78279 None:intergenic
TGTAGGCATGATCGGTCCAA+GGG 0.589089 tig0016604:+72571 Msa1358990:intron
ATAGGCTTGAACAGGAATCA+GGG 0.590851 tig0016604:+72270 Msa1358990:intron
CGTGTGACTTGGAGTCCAGA+CGG 0.591857 tig0016604:+74639 Msa1358990:CDS
ATATAATGTCCGCGTAGATG+AGG 0.592887 tig0016604:+77505 Msa1358990:CDS
ACAACTGTTGATGCTGATGG+GGG 0.593368 tig0016604:+75869 Msa1358990:CDS
TTCTGTTGACTACCCATCTG+GGG 0.593485 tig0016604:+73919 Msa1358990:CDS
GTTGGTGGACCTTCAATGCC+CGG 0.593917 tig0016604:+73711 Msa1358990:CDS
ACCATGGCTTATAGTGCTGA+TGG 0.594598 tig0016604:+75517 Msa1358990:CDS
TGCGAACTCTCATCAATCAA+AGG 0.600390 tig0016604:+72917 Msa1358990:CDS
ATGTGGGACTAGCAAGGATG+GGG 0.600787 tig0016604:+75673 Msa1358990:CDS
ATGTGATCTGAATCCCCAGA+TGG 0.601706 tig0016604:-73932 None:intergenic
TCAACAGAAGGATTAGTTGG+AGG 0.601820 tig0016604:-73905 None:intergenic
GAGCCATTCTCAATAGGTGG+AGG 0.603524 tig0016604:-78590 None:intergenic
ACCTGCACAGGCAGATACAC+GGG 0.604075 tig0016604:+77954 Msa1358990:CDS
GCCTGGCCATGACCATGACC+CGG 0.604620 tig0016604:-74137 None:intergenic
TTTCATCTGATCCAAGACAA+AGG 0.604636 tig0016604:+72035 Msa1358990:five_prime_UTR
ACCCCATGTGCACCAAGAGG+AGG 0.608060 tig0016604:-73481 None:intergenic
CCAGATGGGTAGTCAACAGA+AGG 0.608408 tig0016604:-73917 None:intergenic
CAGATATACTCTTACCATGG+TGG 0.610343 tig0016604:+74809 Msa1358990:CDS
GATATACTCTTACCATGGTG+GGG 0.612351 tig0016604:+74811 Msa1358990:CDS
AAAGCTAGAAAGGTTGCCGC+AGG 0.615725 tig0016604:-77425 None:intergenic
TTGTATGGAATACTGATGGG+TGG 0.616289 tig0016604:+77884 Msa1358990:CDS
TGGTCGGTGGTGTACAACCA+TGG 0.616324 tig0016604:+75501 Msa1358990:CDS
GCAAACTGATTTGGTTCGTG+TGG 0.616553 tig0016604:-78500 None:intergenic
TGTGATCTGAATCCCCAGAT+GGG 0.616881 tig0016604:-73931 None:intergenic
TTTGCGGAAAGATAAGCAGA+AGG 0.618711 tig0016604:-78289 None:intergenic
GTTCATGCCACCACCACCTG+CGG 0.619660 tig0016604:+77409 Msa1358990:CDS
ACTTGAGAGAGCCTCGTCTG+TGG 0.621568 tig0016604:+76262 Msa1358990:CDS
TGTTTCAGTTGGTACAAATG+TGG 0.622944 tig0016604:+74373 Msa1358990:intron
TTTGAGCCCCTTGAGTCTGA+AGG 0.623936 tig0016604:+78535 Msa1358990:CDS
CATTGTTATGACAGATATCG+AGG 0.624982 tig0016604:+76905 Msa1358990:intron
CGTCTGGACTCCAAGTCACA+CGG 0.625414 tig0016604:-74638 None:intergenic
TGAAGTACGACAGCACTTGG+AGG 0.625625 tig0016604:+74835 Msa1358990:CDS
AAACCCTCCAACCTTTGGCA+AGG 0.626023 tig0016604:-73458 None:intergenic
TCTTGCAATTTCCTGCTGGG+AGG 0.626915 tig0016604:+77926 Msa1358990:CDS
ATGGTTGTACACCACCGACC+AGG 0.627314 tig0016604:-75499 None:intergenic
TAAGGTAAAAGCTTCAAACA+TGG 0.627426 tig0016604:-71635 None:intergenic
TTGGTGCAGCAGCATCTCGC+GGG 0.627821 tig0016604:-78156 None:intergenic
TTCAAGGATCTACAATGAGA+CGG 0.628108 tig0016604:-76629 None:intergenic
GCTGAGCCATTCTCAATAGG+TGG 0.629762 tig0016604:-78593 None:intergenic
CTGAGGTGGCACACTAGCAG+TGG 0.630930 tig0016604:-77138 None:intergenic
TGCAGCAGTAGCAACTGACA+TGG 0.631111 tig0016604:-76228 None:intergenic
TTGATTATGATGCTCCTGGT+CGG 0.631347 tig0016604:+75485 Msa1358990:CDS
GCATAATGGGAATTGGGATG+AGG 0.631900 tig0016604:+72328 Msa1358990:CDS
TGATCGCAATTCATCCGGCA+AGG 0.632720 tig0016604:+77008 Msa1358990:CDS
ATTGGTGCAGCAGCATCTCG+CGG 0.634288 tig0016604:-78157 None:intergenic
AGTAATAGCTGCCACAGACG+AGG 0.635280 tig0016604:-76273 None:intergenic
TGAGGAGGAAAAGTTCAAAG+AGG 0.635318 tig0016604:+72112 Msa1358990:CDS
AATGCGGTAGCTAATTCGGT+TGG 0.635786 tig0016604:+78601 Msa1358990:CDS
ACCATCAGCACTATAAGCCA+TGG 0.636737 tig0016604:-75518 None:intergenic
GAAGGTTGCCACAACTGAGG+TGG 0.637425 tig0016604:-77152 None:intergenic
ACCAATAGGAATGTCTGATG+AGG 0.639088 tig0016604:+73970 Msa1358990:CDS
GATGTCAAATCCTACTACCG+TGG 0.640725 tig0016604:+73647 Msa1358990:CDS
ATTATGATGCTCCTGGTCGG+TGG 0.647777 tig0016604:+75488 Msa1358990:CDS
TGTGACTTGGAGTCCAGACG+GGG 0.652419 tig0016604:+74641 Msa1358990:CDS
CAGTTGTGGCAACCTTCAAG+TGG 0.652723 tig0016604:+77158 Msa1358990:CDS
AGAAACTGATGGATGTGCCA+CGG 0.652770 tig0016604:-73664 None:intergenic
TAGATGGAAAGATAAAAGCA+TGG 0.652932 tig0016604:+75437 Msa1358990:CDS
AACACCAGAAACCATGACAA+AGG 0.654122 tig0016604:+76120 Msa1358990:CDS
TTTCATGTACCACCAAGAAG+CGG 0.654482 tig0016604:-77999 None:intergenic
TGAGAATGCAAGAGTCACAA+AGG 0.655072 tig0016604:+76658 Msa1358990:CDS
GTCTGCGAGAGCAATCATGT+TGG 0.656484 tig0016604:+72816 Msa1358990:CDS
GTCGTACTTCATCCCCACCA+TGG 0.666733 tig0016604:-74823 None:intergenic
CACTTGCCTTCAGACTCAAG+GGG 0.667019 tig0016604:-78560 None:intergenic
TCATCTGATCCAAGACAAAG+GGG 0.667441 tig0016604:+72037 Msa1358990:five_prime_UTR
CCCACCCCATGTGCACCAAG+AGG 0.667626 tig0016604:-73484 None:intergenic
GAATGTGCTAGTTTCATCTG+GGG 0.667935 tig0016604:+77672 Msa1358990:CDS
GCAGCAGTAGCAACTGACAT+GGG 0.669717 tig0016604:-76227 None:intergenic
CTAGTGTGCCACCTCAGTTG+TGG 0.670215 tig0016604:+77144 Msa1358990:CDS
GCTACTAGGATCCTTGCCAA+AGG 0.673464 tig0016604:+73447 Msa1358990:CDS
GTTGAATGGAATGAAAGTGA+AGG 0.675322 tig0016604:+75707 Msa1358990:CDS
GCACATCCATCAGTTTCTGG+AGG 0.677395 tig0016604:+73669 Msa1358990:CDS
CTTGAAGGTTGCCACAACTG+AGG 0.682276 tig0016604:-77155 None:intergenic
AAGGAAGCAGAAGTATCTCG+AGG 0.685222 tig0016604:+72421 Msa1358990:CDS
TTTGACATCCAACCAGCCAG+CGG 0.686782 tig0016604:-73633 None:intergenic
TTTGGCAAGGATCCTAGTAG+CGG 0.692097 tig0016604:-73445 None:intergenic
CAGCTATGCGTGATCACCTG+TGG 0.695511 tig0016604:+75007 Msa1358990:CDS
GCTGTGAAAAGGACATACCA+AGG 0.701485 tig0016604:+75731 Msa1358990:CDS
CGTTAATGATAACAATACTG+AGG 0.702656 tig0016604:+77199 Msa1358990:CDS
CAACTTTAGTGAAACCAGAG+AGG 0.724737 tig0016604:-72361 None:intergenic
GGATGTGCAGCAATTACGAG+CGG 0.746163 tig0016604:-78479 None:intergenic
GAATGGCTCAGCAAGCAATG+CGG 0.784613 tig0016604:+78585 Msa1358990:CDS
GCAATGGTACCTCATCTACG+CGG 0.793587 tig0016604:-77514 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATGCTTAATTTTTT+TGG + tig0016604:71840-71859 Msa1358990:intron 10.0%
!!! TTTTTATGCTTAATTTTTTT+GGG + tig0016604:71841-71860 Msa1358990:intron 10.0%
!!! TTTTTTTCTACTTTTTTTTA+GGG + tig0016604:71864-71883 Msa1358990:intron 10.0%
!! AAATAATCAAATAATTTAAC+TGG - tig0016604:71980-71999 None:intergenic 10.0%
!! TTAATAATAAACAGTAAAAT+GGG - tig0016604:72162-72181 None:intergenic 10.0%
!! ATTAATAATAAACAGTAAAA+TGG - tig0016604:72163-72182 None:intergenic 10.0%
!!! TTTTATTAGAAATATAATTC+CGG + tig0016604:75911-75930 Msa1358990:intron 10.0%
!!! GTTTTTTTCTACTTTTTTTT+AGG + tig0016604:71863-71882 Msa1358990:intron 15.0%
!!! TGTTTTTGTTGATTTTTTTT+TGG + tig0016604:71919-71938 Msa1358990:intron 15.0%
!!! ATGTGTTTTTGTAAAATAAT+AGG + tig0016604:72252-72271 Msa1358990:intron 15.0%
!!! TTTTTTTGTTTGATTTTTGT+AGG + tig0016604:72554-72573 Msa1358990:intron 15.0%
!!! ACTCTTATTTTACTTTTAAT+TGG + tig0016604:73111-73130 Msa1358990:intron 15.0%
!! TAAACTAATAGAGTTATATT+AGG - tig0016604:75277-75296 None:intergenic 15.0%
!!! TTTTTGTGTGAATATATTAT+AGG + tig0016604:75642-75661 Msa1358990:intron 15.0%
!! TAATAAAACAATTAAGTTAC+CGG - tig0016604:75899-75918 None:intergenic 15.0%
!!! ATGTTATTTACTTACTAATT+TGG + tig0016604:76682-76701 Msa1358990:intron 15.0%
!! TTAGAATAGAAAAAAAGTAA+TGG - tig0016604:76750-76769 None:intergenic 15.0%
!! TAAGCATAAAAAATGATCAA+AGG - tig0016604:71833-71852 None:intergenic 20.0%
!!! TTGATTTTTTTTTGGTGTTA+TGG + tig0016604:71927-71946 Msa1358990:intron 20.0%
!! AATAACTTTCTTGTAAACTA+TGG + tig0016604:73008-73027 Msa1358990:intron 20.0%
!!! TTTTACTTTTAATTGGTGAT+AGG + tig0016604:73118-73137 Msa1358990:intron 20.0%
!! AATTAAATTACAGCTTGAAT+TGG + tig0016604:73311-73330 Msa1358990:intron 20.0%
!!! ACAAAAAGAGTTTTTATATC+TGG - tig0016604:73370-73389 None:intergenic 20.0%
!!! AGATATAAAAACTCTTTTTG+TGG + tig0016604:73369-73388 Msa1358990:CDS 20.0%
!!! TTATCTTTTGATTCTTACTT+TGG + tig0016604:73547-73566 Msa1358990:intron 20.0%
!! TCAAAAAAACACAATTGAAA+GGG - tig0016604:74288-74307 None:intergenic 20.0%
!!! GATTTATTTTTGCTTACTTT+AGG + tig0016604:74880-74899 Msa1358990:intron 20.0%
!!! GAATGTTTTCTTTATAATGT+GGG - tig0016604:75205-75224 None:intergenic 20.0%
!!! TGAATGTTTTCTTTATAATG+TGG - tig0016604:75206-75225 None:intergenic 20.0%
!! ACATTATAAAGAAAACATTC+AGG + tig0016604:75205-75224 Msa1358990:CDS 20.0%
!!! TATTCAAAGGATTTTATTTG+AGG - tig0016604:75349-75368 None:intergenic 20.0%
!! CTAACTATAAACATATTCAA+AGG - tig0016604:75362-75381 None:intergenic 20.0%
!!! ATGATTTCTCCATTAAATTT+TGG + tig0016604:75822-75841 Msa1358990:CDS 20.0%
!!! TGATTTCTCCATTAAATTTT+GGG + tig0016604:75823-75842 Msa1358990:CDS 20.0%
!! AATAAAACAATTAAGTTACC+GGG - tig0016604:75898-75917 None:intergenic 20.0%
!!! TATTAGGTTTTATTGATAAG+AGG - tig0016604:76169-76188 None:intergenic 20.0%
!!! GTTCATTTTAAACATTCATA+TGG + tig0016604:76704-76723 Msa1358990:intron 20.0%
!! GATAACAATATTATTGCTAT+AGG + tig0016604:77458-77477 Msa1358990:CDS 20.0%
!! AAATTGCTTTCATAATCATA+TGG + tig0016604:77825-77844 Msa1358990:intron 20.0%
!!! ATTCAATTTCAGTTTTATGT+TGG + tig0016604:78077-78096 Msa1358990:intron 20.0%
! AAACAGTAAAATGGGAAAAA+AGG - tig0016604:72154-72173 None:intergenic 25.0%
!!! TCACTAAAGTTGATGATAAT+AGG + tig0016604:72372-72391 Msa1358990:CDS 25.0%
!!! TGAAGATATTTTTCGAGATA+AGG + tig0016604:72402-72421 Msa1358990:CDS 25.0%
! ATTTAATGAAGAGTTGTTCA+AGG + tig0016604:72633-72652 Msa1358990:CDS 25.0%
!! TTTTAACACTGGAGAATTTT+AGG + tig0016604:72668-72687 Msa1358990:CDS 25.0%
!!! TTTTTTTTTTTACTTGAGCG+TGG + tig0016604:72706-72725 Msa1358990:intron 25.0%
!! AGAGTTTTTATATCTGGATT+TGG - tig0016604:73364-73383 None:intergenic 25.0%
! TTTAAACCAAATCAGTTTAG+TGG - tig0016604:73510-73529 None:intergenic 25.0%
!!! CTAAACTGATTTGGTTTAAA+AGG + tig0016604:73510-73529 Msa1358990:intron 25.0%
! TAACAGAAAGCAAAAGAATA+TGG - tig0016604:73739-73758 None:intergenic 25.0%
! GTAATCTGCTATATCATTTA+TGG + tig0016604:73992-74011 Msa1358990:intron 25.0%
! ATGATAACAAAAACTCACAT+GGG - tig0016604:74047-74066 None:intergenic 25.0%
! AATGATAACAAAAACTCACA+TGG - tig0016604:74048-74067 None:intergenic 25.0%
! GTCAAAAAAACACAATTGAA+AGG - tig0016604:74289-74308 None:intergenic 25.0%
! AAAATAATCATGACCATTTC+AGG + tig0016604:74581-74600 Msa1358990:intron 25.0%
!! TCAACATAACTGATTTCTAA+TGG + tig0016604:74739-74758 Msa1358990:intron 25.0%
!! TGGTGATGATAAAACTATTA+AGG + tig0016604:75027-75046 Msa1358990:CDS 25.0%
!!! AAAAGTGTACTGTTTTATAC+CGG - tig0016604:75150-75169 None:intergenic 25.0%
!! ATAAAACAGTACACTTTTGA+AGG + tig0016604:75152-75171 Msa1358990:CDS 25.0%
!! TAACTCTATTAGTTTAGTTC+TGG + tig0016604:75281-75300 Msa1358990:intron 25.0%
! AATTTGATACGACCAAAAAT+CGG + tig0016604:75783-75802 Msa1358990:CDS 25.0%
! TAGTACCTTATCTGAATTAT+AGG + tig0016604:75958-75977 Msa1358990:intron 25.0%
! TGAGAATGGAATTAAAATCT+TGG + tig0016604:76036-76055 Msa1358990:CDS 25.0%
!! TATCTTGCATTTTTATCAGA+AGG + tig0016604:76309-76328 Msa1358990:intron 25.0%
! TACATTATAACATTCACAGT+GGG - tig0016604:76451-76470 None:intergenic 25.0%
! ATACATTATAACATTCACAG+TGG - tig0016604:76452-76471 None:intergenic 25.0%
! ATTTAATTGGACAGCAAAAA+GGG + tig0016604:76788-76807 Msa1358990:intron 25.0%
!!! AGGTTGATATATACTAATTC+AGG + tig0016604:76925-76944 Msa1358990:CDS 25.0%
!! CTATTCCAATTTTGTGATTA+GGG - tig0016604:77076-77095 None:intergenic 25.0%
!! TCTATTCCAATTTTGTGATT+AGG - tig0016604:77077-77096 None:intergenic 25.0%
!! CATTACGTAAGAATCATTTT+TGG - tig0016604:77249-77268 None:intergenic 25.0%
! AAATGATTCTTACGTAATGT+CGG + tig0016604:77250-77269 Msa1358990:CDS 25.0%
!! GTTCAATATGATGACTTTTA+AGG + tig0016604:77295-77314 Msa1358990:CDS 25.0%
! TAATATTGTTATCTTGAGGA+TGG - tig0016604:77451-77470 None:intergenic 25.0%
! GCAATAATATTGTTATCTTG+AGG - tig0016604:77455-77474 None:intergenic 25.0%
!!! ACACAATTTTTTTTCTTTGC+AGG + tig0016604:77588-77607 Msa1358990:intron 25.0%
! TAGATGCAATTTAATACCAA+AGG - tig0016604:77734-77753 None:intergenic 25.0%
! TTGGTATTAAATTGCATCTA+AGG + tig0016604:77734-77753 Msa1358990:intron 25.0%
!! CTATTGTACAGATTTTTGTA+TGG + tig0016604:77869-77888 Msa1358990:intron 25.0%
!! ATTTTTGTATGGAATACTGA+TGG + tig0016604:77880-77899 Msa1358990:CDS 25.0%
!! TTTTTGTATGGAATACTGAT+GGG + tig0016604:77881-77900 Msa1358990:CDS 25.0%
! AAACGTTAATAACTTGAAAC+AGG - tig0016604:78330-78349 None:intergenic 25.0%
! CAACAAGAAGTAATACATAA+AGG - tig0016604:78396-78415 None:intergenic 25.0%
TAAGGTAAAAGCTTCAAACA+TGG - tig0016604:71638-71657 None:intergenic 30.0%
!! ATGTTTGAAGCTTTTACCTT+AGG + tig0016604:71637-71656 Msa1358990:five_prime_UTR 30.0%
GATTCTGCAAAAAAGAGAAA+TGG - tig0016604:71697-71716 None:intergenic 30.0%
! TTTTTCTCTGTTTTGCATCT+TGG + tig0016604:71769-71788 Msa1358990:intron 30.0%
! TGCATCTTGGATTCTTTTTA+AGG + tig0016604:71782-71801 Msa1358990:intron 30.0%
! GCATCTTGGATTCTTTTTAA+GGG + tig0016604:71783-71802 Msa1358990:intron 30.0%
!! CATCTTGGATTCTTTTTAAG+GGG + tig0016604:71784-71803 Msa1358990:intron 30.0%
GTAAAATAATAGGCTTGAAC+AGG + tig0016604:72262-72281 Msa1358990:intron 30.0%
TTTGAAGATGAAGTGCATAA+TGG + tig0016604:72314-72333 Msa1358990:CDS 30.0%
TTGAAGATGAAGTGCATAAT+GGG + tig0016604:72315-72334 Msa1358990:CDS 30.0%
!!! CTAGTATAACCACTGATTTT+TGG + tig0016604:72527-72546 Msa1358990:intron 30.0%
AAAAAACAGCCAAAAATCAG+TGG - tig0016604:72539-72558 None:intergenic 30.0%
! TTGATTTTTGTAGGCATGAT+CGG + tig0016604:72563-72582 Msa1358990:intron 30.0%
AATGAACAATTGTCCAAGTA+TGG + tig0016604:72784-72803 Msa1358990:CDS 30.0%
! TGAACTCAAAAAGTTGATTG+AGG + tig0016604:72840-72859 Msa1358990:CDS 30.0%
AGATACTAAAAGCAAATCGA+TGG - tig0016604:73034-73053 None:intergenic 30.0%
TAAAATAAGAGTTCAGCGAT+TGG - tig0016604:73103-73122 None:intergenic 30.0%
! TTTAATTGGTGATAGGAGTT+AGG + tig0016604:73125-73144 Msa1358990:intron 30.0%
ATCAACTTTGTAAGAATCCA+CGG + tig0016604:73338-73357 Msa1358990:CDS 30.0%
AAAGCAAAAGAATATGGTAC+CGG - tig0016604:73733-73752 None:intergenic 30.0%
AGCTTAAGAAGGCAATAAAA+TGG - tig0016604:73864-73883 None:intergenic 30.0%
TCTTAAGGAACTTCAAAGTT+TGG + tig0016604:74438-74457 Msa1358990:CDS 30.0%
CTTAAGGAACTTCAAAGTTT+GGG + tig0016604:74439-74458 Msa1358990:CDS 30.0%
TGTTCATCAAGAACATCAAT+GGG - tig0016604:74514-74533 None:intergenic 30.0%
TTGTTCATCAAGAACATCAA+TGG - tig0016604:74515-74534 None:intergenic 30.0%
AAACCCTGAATCTTGTAATT+CGG + tig0016604:74542-74561 Msa1358990:intron 30.0%
AATCTAGAAATGGAGTTCAT+AGG - tig0016604:74936-74955 None:intergenic 30.0%
!!! AATAGTTTTATCATCACCAC+AGG - tig0016604:75026-75045 None:intergenic 30.0%
GAAAACATTCAGGTATTTGT+TGG + tig0016604:75215-75234 Msa1358990:intron 30.0%
!! AGTTTAGTTCTGGAAAATGT+TGG + tig0016604:75291-75310 Msa1358990:intron 30.0%
! CTTTAAGAAAACTGAGCTAA+CGG - tig0016604:75324-75343 None:intergenic 30.0%
TAGATGGAAAGATAAAAGCA+TGG + tig0016604:75437-75456 Msa1358990:CDS 30.0%
! TATTATAGGCTCTTTTCATG+TGG + tig0016604:75656-75675 Msa1358990:intron 30.0%
! ATTATAGGCTCTTTTCATGT+GGG + tig0016604:75657-75676 Msa1358990:intron 30.0%
TTCATTCCATTCAACAATAG+AGG - tig0016604:75702-75721 None:intergenic 30.0%
!!! CTCCATTAAATTTTGGGATA+TGG + tig0016604:75829-75848 Msa1358990:CDS 30.0%
GTCCATATCCCAAAATTTAA+TGG - tig0016604:75834-75853 None:intergenic 30.0%
TGGCATATGTCAGAAATATT+AGG - tig0016604:76185-76204 None:intergenic 30.0%
ACTGACATGGGATTTATTAT+AGG - tig0016604:76218-76237 None:intergenic 30.0%
AACGACAAACAGTTAATTGA+CGG - tig0016604:76500-76519 None:intergenic 30.0%
! TCGTTTTCAACTCATTAGAA+TGG + tig0016604:76515-76534 Msa1358990:intron 30.0%
! CGTTTTCAACTCATTAGAAT+GGG + tig0016604:76516-76535 Msa1358990:intron 30.0%
! GTTTTCAACTCATTAGAATG+GGG + tig0016604:76517-76536 Msa1358990:intron 30.0%
TTTAATATCACCTAAGTTCC+GGG - tig0016604:76546-76565 None:intergenic 30.0%
GTTTAATATCACCTAAGTTC+CGG - tig0016604:76547-76566 None:intergenic 30.0%
TTGGATTCTTCACTTATTCT+AGG - tig0016604:76569-76588 None:intergenic 30.0%
TCAACGAACTGAGATTTAAT+TGG + tig0016604:76775-76794 Msa1358990:intron 30.0%
GATTTAATTGGACAGCAAAA+AGG + tig0016604:76787-76806 Msa1358990:intron 30.0%
CATGCAATTACAATAATCGA+AGG - tig0016604:76858-76877 None:intergenic 30.0%
GATATCTGTCATAACAATGA+TGG - tig0016604:76904-76923 None:intergenic 30.0%
TAATTCAGGTAATGCTATTC+TGG + tig0016604:76939-76958 Msa1358990:CDS 30.0%
TTGTTCCCTAATCACAAAAT+TGG + tig0016604:77068-77087 Msa1358990:intron 30.0%
TGTTTATATTATGTTCCTGC+AGG + tig0016604:77115-77134 Msa1358990:intron 30.0%
CGTTAATGATAACAATACTG+AGG + tig0016604:77199-77218 Msa1358990:CDS 30.0%
CAATATTATTGCTATAGGCA+TGG + tig0016604:77463-77482 Msa1358990:CDS 30.0%
CAGGTTAAAAGTAAACTCAA+AGG + tig0016604:77607-77626 Msa1358990:intron 30.0%
! GACCAGTTATTCTTTTAGTA+TGG - tig0016604:77633-77652 None:intergenic 30.0%
ATCAAGTGTAAATTTGCCTT+TGG + tig0016604:77715-77734 Msa1358990:intron 30.0%
!!! CAGTTTTGTTGCTTCATAAA+TGG - tig0016604:78034-78053 None:intergenic 30.0%
CATTTATGAAGCAACAAAAC+TGG + tig0016604:78032-78051 Msa1358990:CDS 30.0%
! AAAACTGGAATGTTTAAAGC+AGG + tig0016604:78047-78066 Msa1358990:CDS 30.0%
AAAAGCTTCAAACATGGAGA+AGG - tig0016604:71632-71651 None:intergenic 35.0%
! GCTTTTACCTTAGGATTTCA+AGG + tig0016604:71646-71665 Msa1358990:five_prime_UTR 35.0%
!! TTAACTGGCAAAAGCACTTA+TGG - tig0016604:71965-71984 None:intergenic 35.0%
TTTCATCTGATCCAAGACAA+AGG + tig0016604:72035-72054 Msa1358990:five_prime_UTR 35.0%
TTCATCTGATCCAAGACAAA+GGG + tig0016604:72036-72055 Msa1358990:five_prime_UTR 35.0%
! ATGAAGTGCATAATGGGAAT+TGG + tig0016604:72321-72340 Msa1358990:CDS 35.0%
! TGAAGTGCATAATGGGAATT+GGG + tig0016604:72322-72341 Msa1358990:CDS 35.0%
TGCAATTTGTCGCGAAATAA+GGG - tig0016604:72871-72890 None:intergenic 35.0%
TTGCAATTTGTCGCGAAATA+AGG - tig0016604:72872-72891 None:intergenic 35.0%
AACCTTGAGTTCTTAAGGTT+GGG - tig0016604:72898-72917 None:intergenic 35.0%
CTTAACTGAAGTAGCTCATA+CGG + tig0016604:73052-73071 Msa1358990:intron 35.0%
! GCATCTTTTCAGCTAAATGA+TGG + tig0016604:73215-73234 Msa1358990:intron 35.0%
GCAGCTCTACTATATAACAA+TGG - tig0016604:73242-73261 None:intergenic 35.0%
AAGCAAAAGAATATGGTACC+GGG - tig0016604:73732-73751 None:intergenic 35.0%
! TACGTAATCATAGTGCCATT+AGG - tig0016604:73808-73827 None:intergenic 35.0%
TAATGGCACTATGATTACGT+AGG + tig0016604:73807-73826 Msa1358990:intron 35.0%
! TAGTCAACAGAAGGATTAGT+TGG - tig0016604:73911-73930 None:intergenic 35.0%
TCTAAGAGAACAAGACCAAT+AGG + tig0016604:73956-73975 Msa1358990:CDS 35.0%
AGAAGTAAAGTCTGTTGAAC+TGG - tig0016604:74245-74264 None:intergenic 35.0%
GTTCAACAGACTTTACTTCT+TGG + tig0016604:74245-74264 Msa1358990:CDS 35.0%
CAGTCAATTGACAGCAAAAA+TGG - tig0016604:74334-74353 None:intergenic 35.0%
! TGTTTCAGTTGGTACAAATG+TGG + tig0016604:74373-74392 Msa1358990:intron 35.0%
!! AGACATTGGTTTATGGGAAT+TGG + tig0016604:74397-74416 Msa1358990:CDS 35.0%
!! GACATTGGTTTATGGGAATT+GGG + tig0016604:74398-74417 Msa1358990:CDS 35.0%
GAATTACAAGATTCAGGGTT+TGG - tig0016604:74543-74562 None:intergenic 35.0%
! GTTGAGCTTGTTTGATAAAC+AGG + tig0016604:74761-74780 Msa1358990:intron 35.0%
AAACAGGAGTTGCTTATTCA+AGG + tig0016604:74777-74796 Msa1358990:intron 35.0%
GTTCAGATATACTCTTACCA+TGG + tig0016604:74806-74825 Msa1358990:CDS 35.0%
AGATATACTCTTACCATGGT+GGG + tig0016604:74810-74829 Msa1358990:CDS 35.0%
GGTATGCACACATACATATA+TGG + tig0016604:74856-74875 Msa1358990:intron 35.0%
ATGGCTTAGTTAGCAACATA+TGG - tig0016604:75097-75116 None:intergenic 35.0%
TAAGCCATCTAATGTAACGA+AGG + tig0016604:75109-75128 Msa1358990:intron 35.0%
! ATCTAATGTAACGAAGGTGT+GGG + tig0016604:75115-75134 Msa1358990:intron 35.0%
!! ATTCAGGTATTTGTTGGCTT+TGG + tig0016604:75221-75240 Msa1358990:intron 35.0%
! GTTCCAGTTCATCTTTTCAA+CGG + tig0016604:75411-75430 Msa1358990:intron 35.0%
! ATCTTTTCAACGGCATTAGA+TGG + tig0016604:75421-75440 Msa1358990:CDS 35.0%
AGCATGGTTGTATGACAATT+TGG + tig0016604:75453-75472 Msa1358990:CDS 35.0%
GCATGGTTGTATGACAATTT+GGG + tig0016604:75454-75473 Msa1358990:CDS 35.0%
ATTAAGAACACAAGTAGCCA+TGG - tig0016604:75563-75582 None:intergenic 35.0%
GTTGAATGGAATGAAAGTGA+AGG + tig0016604:75707-75726 Msa1358990:CDS 35.0%
AAAGGACATACCAAGGATTT+CGG + tig0016604:75738-75757 Msa1358990:CDS 35.0%
CAACTACAATTTCAAGAGAC+CGG - tig0016604:75933-75952 None:intergenic 35.0%
GCTTGCCTATAATTCAGATA+AGG - tig0016604:75966-75985 None:intergenic 35.0%
GAGATCCTTCCTTATTGAAA+CGG - tig0016604:75997-76016 None:intergenic 35.0%
GGAATTAAAATCTTGGCCAA+TGG + tig0016604:76043-76062 Msa1358990:CDS 35.0%
TGTTCTTGATGCATCATATG+AGG - tig0016604:76104-76123 None:intergenic 35.0%
! TAGACTTGTAGATCTTTTCC+TGG + tig0016604:76143-76162 Msa1358990:intron 35.0%
! TTTCTGACATATGCCATTTG+TGG + tig0016604:76189-76208 Msa1358990:intron 35.0%
TTATTATAGGCTGCCACAAA+TGG - tig0016604:76205-76224 None:intergenic 35.0%
!! CCATATCTTTGACTTGTCAT+TGG - tig0016604:76588-76607 None:intergenic 35.0%
CCAATGACAAGTCAAAGATA+TGG + tig0016604:76585-76604 Msa1358990:CDS 35.0%
TTCAAGGATCTACAATGAGA+CGG - tig0016604:76632-76651 None:intergenic 35.0%
! ATCGAAGGCATACATAAACA+AGG - tig0016604:76843-76862 None:intergenic 35.0%
CATTGTTATGACAGATATCG+AGG + tig0016604:76905-76924 Msa1358990:intron 35.0%
CACATATTATCATACCTTGC+CGG - tig0016604:77025-77044 None:intergenic 35.0%
GCAAGGTATGATAATATGTG+AGG + tig0016604:77025-77044 Msa1358990:intron 35.0%
CATTAACGTCATTAGTCATC+AGG - tig0016604:77187-77206 None:intergenic 35.0%
!! TTTTGGAAAGAGCAAAGCAT+GGG - tig0016604:77232-77251 None:intergenic 35.0%
!! TTTTTGGAAAGAGCAAAGCA+TGG - tig0016604:77233-77252 None:intergenic 35.0%
TCACTATTCAAGTGTGGATT+TGG + tig0016604:77335-77354 Msa1358990:intron 35.0%
CTAACCAACTTCAATCTTCT+TGG + tig0016604:77365-77384 Msa1358990:intron 35.0%
GCGGACATTATATATCTGAA+TGG - tig0016604:77498-77517 None:intergenic 35.0%
TACCATTGCATTGTTGTCTA+TGG + tig0016604:77528-77547 Msa1358990:intron 35.0%
ATCCATAGACAACAATGCAA+TGG - tig0016604:77533-77552 None:intergenic 35.0%
GGCCATACTAAAAGAATAAC+TGG + tig0016604:77628-77647 Msa1358990:CDS 35.0%
! TGAATGTGCTAGTTTCATCT+GGG + tig0016604:77671-77690 Msa1358990:CDS 35.0%
TTTGTCTGATGTATGATGCT+TGG + tig0016604:78121-78140 Msa1358990:intron 35.0%
GAGAAAGTTGCATGTGATAT+TGG - tig0016604:78178-78197 None:intergenic 35.0%
GATTGTTGCATCTAAAAAGC+TGG - tig0016604:78224-78243 None:intergenic 35.0%
GATAAGCAGAAGGATTGATA+CGG - tig0016604:78282-78301 None:intergenic 35.0%
CTTCTCACCTTGAAATCCTA+AGG - tig0016604:71656-71675 None:intergenic 40.0%
TCATCTGATCCAAGACAAAG+GGG + tig0016604:72037-72056 Msa1358990:five_prime_UTR 40.0%
CTTGATCTTGCAGTTTCTTG+AGG + tig0016604:72094-72113 Msa1358990:CDS 40.0%
TGAGGAGGAAAAGTTCAAAG+AGG + tig0016604:72112-72131 Msa1358990:CDS 40.0%
AATAGGCTTGAACAGGAATC+AGG + tig0016604:72269-72288 Msa1358990:intron 40.0%
ATAGGCTTGAACAGGAATCA+GGG + tig0016604:72270-72289 Msa1358990:intron 40.0%
CAACTTTAGTGAAACCAGAG+AGG - tig0016604:72364-72383 None:intergenic 40.0%
! GATCACACAGCTTTTAACAC+TGG + tig0016604:72657-72676 Msa1358990:CDS 40.0%
AGACTTCGTATCACCATACT+TGG - tig0016604:72800-72819 None:intergenic 40.0%
TTCCCAACCTTAAGAACTCA+AGG + tig0016604:72893-72912 Msa1358990:CDS 40.0%
CAACCTTGAGTTCTTAAGGT+TGG - tig0016604:72899-72918 None:intergenic 40.0%
TTCGCAACCTTGAGTTCTTA+AGG - tig0016604:72903-72922 None:intergenic 40.0%
TGCGAACTCTCATCAATCAA+AGG + tig0016604:72917-72936 Msa1358990:CDS 40.0%
TACAACACGAGGCAAATTTG+CGG - tig0016604:73158-73177 None:intergenic 40.0%
TTTGCCTCGTGTTGTAACTT+TGG + tig0016604:73162-73181 Msa1358990:intron 40.0%
ATGACCAAAGTTACAACACG+AGG - tig0016604:73169-73188 None:intergenic 40.0%
!! AGAGCTGCTGCATTTGTTTT+TGG + tig0016604:73254-73273 Msa1358990:intron 40.0%
TTTATATCTGGATTTGGCCG+TGG - tig0016604:73358-73377 None:intergenic 40.0%
! CTTTTTGTGGATCACTCTTG+TGG + tig0016604:73382-73401 Msa1358990:CDS 40.0%
CTCTACTTCTTCATGCCTAA+TGG + tig0016604:73790-73809 Msa1358990:intron 40.0%
TGCTTCAAAGCAGCTTAAGA+AGG - tig0016604:73875-73894 None:intergenic 40.0%
!! TCAACAGAAGGATTAGTTGG+AGG - tig0016604:73908-73927 None:intergenic 40.0%
ACCAATAGGAATGTCTGATG+AGG + tig0016604:73970-73989 Msa1358990:CDS 40.0%
ACCTCATCAGACATTCCTAT+TGG - tig0016604:73974-73993 None:intergenic 40.0%
!! ATCTTGCGTCATTTTGTGCA+GGG + tig0016604:74080-74099 Msa1358990:intron 40.0%
GTCGCTGACAAAACATTAAC+AGG - tig0016604:74113-74132 None:intergenic 40.0%
GTCTTGCGAACTCTAAATCA+AGG + tig0016604:74191-74210 Msa1358990:CDS 40.0%
GTAAAGTCTGTTGAACTGGA+TGG - tig0016604:74241-74260 None:intergenic 40.0%
CAACTGAAACATTCCATCGA+GGG - tig0016604:74364-74383 None:intergenic 40.0%
!! ATGTGGCAGACATTGGTTTA+TGG + tig0016604:74390-74409 Msa1358990:CDS 40.0%
!! TGTGGCAGACATTGGTTTAT+GGG + tig0016604:74391-74410 Msa1358990:CDS 40.0%
TTTATGGGAATTGGGCTCTA+GGG + tig0016604:74406-74425 Msa1358990:CDS 40.0%
! TGCTTGTTCAATGCCATTTC+AGG + tig0016604:74469-74488 Msa1358990:CDS 40.0%
CAAGAAAGGACAACCTGAAA+TGG - tig0016604:74485-74504 None:intergenic 40.0%
!! CATTTCAGGTTGTCCTTTCT+TGG + tig0016604:74483-74502 Msa1358990:intron 40.0%
TCAATGGGTATAGCCAAGAA+AGG - tig0016604:74499-74518 None:intergenic 40.0%
GTGCCGAATTACAAGATTCA+GGG - tig0016604:74548-74567 None:intergenic 40.0%
! AGTGCCGAATTACAAGATTC+AGG - tig0016604:74549-74568 None:intergenic 40.0%
CAGATATACTCTTACCATGG+TGG + tig0016604:74809-74828 Msa1358990:CDS 40.0%
GATATACTCTTACCATGGTG+GGG + tig0016604:74811-74830 Msa1358990:CDS 40.0%
CATGGGCATCAATCTAGAAA+TGG - tig0016604:74946-74965 None:intergenic 40.0%
TTCTAGATTGATGCCCATGT+TGG + tig0016604:74947-74966 Msa1358990:intron 40.0%
ATCATTTACTCCGCCAACAT+GGG - tig0016604:74963-74982 None:intergenic 40.0%
TCACGCATAGCTGCTTATTT+GGG - tig0016604:75000-75019 None:intergenic 40.0%
ATCACGCATAGCTGCTTATT+TGG - tig0016604:75001-75020 None:intergenic 40.0%
CACACCTTCGTTACATTAGA+TGG - tig0016604:75116-75135 None:intergenic 40.0%
CATCTAATGTAACGAAGGTG+TGG + tig0016604:75114-75133 Msa1358990:intron 40.0%
!! GTACACTTTTGAAGGTCATG+AGG + tig0016604:75160-75179 Msa1358990:CDS 40.0%
ATGTGGGCAGACAGAATAAA+CGG - tig0016604:75189-75208 None:intergenic 40.0%
ATGCCGTTGAAAAGATGAAC+TGG - tig0016604:75417-75436 None:intergenic 40.0%
TTGATTATGATGCTCCTGGT+CGG + tig0016604:75485-75504 Msa1358990:CDS 40.0%
!! CTTATAGTGCTGATGGTACA+AGG + tig0016604:75524-75543 Msa1358990:CDS 40.0%
AAGGTCCATATTCTGAACCA+TGG + tig0016604:75543-75562 Msa1358990:intron 40.0%
AGTAGCCATGGTTCAGAATA+TGG - tig0016604:75551-75570 None:intergenic 40.0%
GGGAATCCTCTATTGTTGAA+TGG + tig0016604:75693-75712 Msa1358990:CDS 40.0%
AAAGTGAAGGAGCTGTGAAA+AGG + tig0016604:75720-75739 Msa1358990:CDS 40.0%
TACGACCAAAAATCGGTATC+TGG + tig0016604:75790-75809 Msa1358990:CDS 40.0%
CATCAACAGTTGTCAAAAGC+TGG - tig0016604:75862-75881 None:intergenic 40.0%
TTGACAACTGTTGATGCTGA+TGG + tig0016604:75866-75885 Msa1358990:CDS 40.0%
TGACAACTGTTGATGCTGAT+GGG + tig0016604:75867-75886 Msa1358990:CDS 40.0%
AAAATCTTGGCCAATGGAGA+TGG + tig0016604:76049-76068 Msa1358990:CDS 40.0%
AACACCAGAAACCATGACAA+AGG + tig0016604:76120-76139 Msa1358990:CDS 40.0%
TCTACCTTTGTCATGGTTTC+TGG - tig0016604:76127-76146 None:intergenic 40.0%
CTACAAGTCTACCTTTGTCA+TGG - tig0016604:76134-76153 None:intergenic 40.0%
!!! GGTTTTATTGATAAGAGGCC+AGG - tig0016604:76164-76183 None:intergenic 40.0%
CGTTGTGAGATGATGTATCT+TGG + tig0016604:76404-76423 Msa1358990:intron 40.0%
GATGATGTATCTTGGAGAAG+AGG + tig0016604:76412-76431 Msa1358990:intron 40.0%
TTTGTGACTCTTGCATTCTC+AGG - tig0016604:76659-76678 None:intergenic 40.0%
TGAGAATGCAAGAGTCACAA+AGG + tig0016604:76658-76677 Msa1358990:CDS 40.0%
CAAATGCCATTCATCTTCTC+TGG + tig0016604:76971-76990 Msa1358990:CDS 40.0%
CGAAATGATCGCAATTCATC+CGG + tig0016604:77003-77022 Msa1358990:CDS 40.0%
ATTAGGGAACAATAGTAGCG+AGG - tig0016604:77060-77079 None:intergenic 40.0%
TTCTTACGTAATGTCGGCAT+CGG + tig0016604:77256-77275 Msa1358990:CDS 40.0%
!!! TGACTTTTAAGGTGAGCTGT+TGG + tig0016604:77306-77325 Msa1358990:intron 40.0%
CCACACTTGAATAGTGACTT+AGG - tig0016604:77332-77351 None:intergenic 40.0%
CCTAAGTCACTATTCAAGTG+TGG + tig0016604:77329-77348 Msa1358990:intron 40.0%
TTGGCCAAGAAGATTGAAGT+TGG - tig0016604:77372-77391 None:intergenic 40.0%
ACGTTGTCATTGTCTGCATT+TGG - tig0016604:77391-77410 None:intergenic 40.0%
TTGAGGATGGAAAGCTAGAA+AGG - tig0016604:77438-77457 None:intergenic 40.0%
ATATAATGTCCGCGTAGATG+AGG + tig0016604:77505-77524 Msa1358990:CDS 40.0%
! CTGAATGTGCTAGTTTCATC+TGG + tig0016604:77670-77689 Msa1358990:CDS 40.0%
! GAATGTGCTAGTTTCATCTG+GGG + tig0016604:77672-77691 Msa1358990:CDS 40.0%
!! ATGCCTTTTGAGTATGCTGT+TGG + tig0016604:77796-77815 Msa1358990:intron 40.0%
ATGCCAACAGCATACTCAAA+AGG - tig0016604:77802-77821 None:intergenic 40.0%
TTGTATGGAATACTGATGGG+TGG + tig0016604:77884-77903 Msa1358990:CDS 40.0%
! TGTATGGAATACTGATGGGT+GGG + tig0016604:77885-77904 Msa1358990:CDS 40.0%
AGATTCTTGCAATTTCCTGC+TGG + tig0016604:77922-77941 Msa1358990:CDS 40.0%
GATTCTTGCAATTTCCTGCT+GGG + tig0016604:77923-77942 Msa1358990:CDS 40.0%
TACACGGGTACAATTTCATC+AGG + tig0016604:77969-77988 Msa1358990:CDS 40.0%
TTTCATGTACCACCAAGAAG+CGG - tig0016604:78002-78021 None:intergenic 40.0%
! CTGGAATGTTTAAAGCAGGT+TGG + tig0016604:78051-78070 Msa1358990:intron 40.0%
TTTGCGGAAAGATAAGCAGA+AGG - tig0016604:78292-78311 None:intergenic 40.0%
CTTATCTTTCCGCAAATGTC+AGG + tig0016604:78296-78315 Msa1358990:CDS 40.0%
! GTGTCATTACCTGACATTTG+CGG - tig0016604:78308-78327 None:intergenic 40.0%
!! GAACCAAATCAGTTTGCTGT+TGG + tig0016604:78487-78506 Msa1358990:CDS 40.0%
AGTCCAACAGCAAACTGATT+TGG - tig0016604:78493-78512 None:intergenic 40.0%
AAGCAATGCGGTAGCTAATT+CGG + tig0016604:78597-78616 Msa1358990:CDS 40.0%
TTGCCATGTCATCTCTCAGT+AGG + tig0016604:72060-72079 Msa1358990:exon 45.0%
TGCCATGTCATCTCTCAGTA+GGG + tig0016604:72061-72080 Msa1358990:exon 45.0%
GATCTTGCAGTTTCTTGAGG+AGG + tig0016604:72097-72116 Msa1358990:CDS 45.0%
! GCATAATGGGAATTGGGATG+AGG + tig0016604:72328-72347 Msa1358990:CDS 45.0%
!! AAGGAAGCAGAAGTATCTCG+AGG + tig0016604:72421-72440 Msa1358990:CDS 45.0%
!! CTTGCTTGTTTGGTAGTGTC+TGG - tig0016604:72489-72508 None:intergenic 45.0%
GCAACACTCACTTGCTTGTT+TGG - tig0016604:72499-72518 None:intergenic 45.0%
CACTAGTATTTCGACACCCT+TGG - tig0016604:72590-72609 None:intergenic 45.0%
!! GGGTGTCGAAATACTAGTGA+AGG + tig0016604:72591-72610 Msa1358990:CDS 45.0%
ACAACACGAGGCAAATTTGC+GGG - tig0016604:73157-73176 None:intergenic 45.0%
CACTCTTGTGGACAACCAAA+TGG + tig0016604:73394-73413 Msa1358990:CDS 45.0%
TTTGGCAAGGATCCTAGTAG+CGG - tig0016604:73448-73467 None:intergenic 45.0%
GATGTCAAATCCTACTACCG+TGG + tig0016604:73647-73666 Msa1358990:CDS 45.0%
! AGAAACTGATGGATGTGCCA+CGG - tig0016604:73667-73686 None:intergenic 45.0%
!! AATATGGTACCGGGCATTGA+AGG - tig0016604:73723-73742 None:intergenic 45.0%
!! AAGCTGCTTTGAAGCATCCT+AGG + tig0016604:73879-73898 Msa1358990:intron 45.0%
! CTTCTGTTGACTACCCATCT+GGG + tig0016604:73918-73937 Msa1358990:CDS 45.0%
! TTCTGTTGACTACCCATCTG+GGG + tig0016604:73919-73938 Msa1358990:CDS 45.0%
TGTGATCTGAATCCCCAGAT+GGG - tig0016604:73934-73953 None:intergenic 45.0%
ATGTGATCTGAATCCCCAGA+TGG - tig0016604:73935-73954 None:intergenic 45.0%
GGAAACATCATGCATGATCG+CGG + tig0016604:74013-74032 Msa1358990:intron 45.0%
!! GATCTTGCGTCATTTTGTGC+AGG + tig0016604:74079-74098 Msa1358990:intron 45.0%
! TGTTTTGTCAGCGACGTTTC+CGG + tig0016604:74118-74137 Msa1358990:CDS 45.0%
!! TGGCCAGGCTTTTAATTCAC+CGG + tig0016604:74151-74170 Msa1358990:CDS 45.0%
CATCCGGTGAATTAAAAGCC+TGG - tig0016604:74157-74176 None:intergenic 45.0%
ACTGTCTTTGGCAAGTCATC+CGG - tig0016604:74173-74192 None:intergenic 45.0%
AGAGTTCGCAAGACTGTCTT+TGG - tig0016604:74185-74204 None:intergenic 45.0%
CCAACTGAAACATTCCATCG+AGG - tig0016604:74365-74384 None:intergenic 45.0%
CCTCGATGGAATGTTTCAGT+TGG + tig0016604:74362-74381 Msa1358990:intron 45.0%
GGTACAAATGTGGCAGACAT+TGG + tig0016604:74383-74402 Msa1358990:CDS 45.0%
GTTTATGGGAATTGGGCTCT+AGG + tig0016604:74405-74424 Msa1358990:CDS 45.0%
TTGACAAGAGCAGCCTGAAA+TGG - tig0016604:74597-74616 None:intergenic 45.0%
TTTCTGTCAACCGTGTGACT+TGG + tig0016604:74628-74647 Msa1358990:CDS 45.0%
TAGATTGATGCCCATGTTGG+CGG + tig0016604:74950-74969 Msa1358990:intron 45.0%
GATCATTTACTCCGCCAACA+TGG - tig0016604:74964-74983 None:intergenic 45.0%
TGTGGGCAGACAGAATAAAC+GGG - tig0016604:75188-75207 None:intergenic 45.0%
!! CGTGTTGATTATGATGCTCC+TGG + tig0016604:75481-75500 Msa1358990:CDS 45.0%
! ACCATGGCTTATAGTGCTGA+TGG + tig0016604:75517-75536 Msa1358990:CDS 45.0%
ACCATCAGCACTATAAGCCA+TGG - tig0016604:75521-75540 None:intergenic 45.0%
!! CTTTTCATGTGGGACTAGCA+AGG + tig0016604:75667-75686 Msa1358990:CDS 45.0%
GCTGTGAAAAGGACATACCA+AGG + tig0016604:75731-75750 Msa1358990:CDS 45.0%
AAGATCGCTTCCGAAATCCT+TGG - tig0016604:75751-75770 None:intergenic 45.0%
AGGATTTCGGAAGCGATCTT+TGG + tig0016604:75751-75770 Msa1358990:CDS 45.0%
GGATTTCGGAAGCGATCTTT+GGG + tig0016604:75752-75771 Msa1358990:CDS 45.0%
!!! AGCAGCCAGATACCGATTTT+TGG - tig0016604:75798-75817 None:intergenic 45.0%
AAAAATCGGTATCTGGCTGC+TGG + tig0016604:75797-75816 Msa1358990:CDS 45.0%
GACAACTGTTGATGCTGATG+GGG + tig0016604:75868-75887 Msa1358990:CDS 45.0%
ACAACTGTTGATGCTGATGG+GGG + tig0016604:75869-75888 Msa1358990:CDS 45.0%
CCTTATTGAAACGGATGCGT+GGG - tig0016604:75988-76007 None:intergenic 45.0%
TCCTTATTGAAACGGATGCG+TGG - tig0016604:75989-76008 None:intergenic 45.0%
CGCATCCGTTTCAATAAGGA+AGG + tig0016604:75989-76008 Msa1358990:CDS 45.0%
GCTGTCTCTGCAAATGAGAA+TGG + tig0016604:76022-76041 Msa1358990:CDS 45.0%
CAAACGAACACCATCTCCAT+TGG - tig0016604:76062-76081 None:intergenic 45.0%
TGTGGCAGCTATTACTGGAA+TGG + tig0016604:76280-76299 Msa1358990:CDS 45.0%
TGCATTCTCAGGTAGCTTCA+AGG - tig0016604:76648-76667 None:intergenic 45.0%
ATTGGACAGCAAAAAGGGCT+AGG + tig0016604:76793-76812 Msa1358990:intron 45.0%
CCACTTCCAGAGAAGATGAA+TGG - tig0016604:76980-76999 None:intergenic 45.0%
! CCATTCATCTTCTCTGGAAG+TGG + tig0016604:76977-76996 Msa1358990:CDS 45.0%
TCTTACGTAATGTCGGCATC+GGG + tig0016604:77257-77276 Msa1358990:CDS 45.0%
GTATGATGCTTGGATTGCAG+TGG + tig0016604:78131-78150 Msa1358990:intron 45.0%
!! GCAAACTGATTTGGTTCGTG+TGG - tig0016604:78484-78503 None:intergenic 45.0%
!! TTTGCTGTTGGACTGTCAGA+TGG + tig0016604:78499-78518 Msa1358990:CDS 45.0%
CTTGCTGAGCCATTCTCAAT+AGG - tig0016604:78580-78599 None:intergenic 45.0%
AATGCGGTAGCTAATTCGGT+TGG + tig0016604:78601-78620 Msa1358990:CDS 45.0%
GGAACTGGATCGATCATCTT+TGG - tig0016604:78645-78664 None:intergenic 45.0%
!!! TGTTTTTTTAATTATATTAT+AGG + tig0016604:72758-72777 Msa1358990:intron 5.0%
!!! GTTTTTTTAATTATATTATA+GGG + tig0016604:72759-72778 Msa1358990:intron 5.0%
ACATGGCAACCCCTTTGTCT+TGG - tig0016604:72049-72068 None:intergenic 50.0%
CTCCCTACTGAGAGATGACA+TGG - tig0016604:72066-72085 None:intergenic 50.0%
GTCATCTCTCAGTAGGGAGT+TGG + tig0016604:72067-72086 Msa1358990:CDS 50.0%
!! GAGGTTGAGAAGTACCTCTC+TGG + tig0016604:72347-72366 Msa1358990:CDS 50.0%
!! GCAGAAGTATCTCGAGGCAT+TGG + tig0016604:72427-72446 Msa1358990:CDS 50.0%
TTGTAGGCATGATCGGTCCA+AGG + tig0016604:72570-72589 Msa1358990:intron 50.0%
TGTAGGCATGATCGGTCCAA+GGG + tig0016604:72571-72590 Msa1358990:intron 50.0%
GTCTGCGAGAGCAATCATGT+TGG + tig0016604:72816-72835 Msa1358990:CDS 50.0%
CAACACGAGGCAAATTTGCG+GGG - tig0016604:73156-73175 None:intergenic 50.0%
GTGGACAACCAAATGGTGCA+CGG + tig0016604:73401-73420 Msa1358990:CDS 50.0%
TGGACAACCAAATGGTGCAC+GGG + tig0016604:73402-73421 Msa1358990:CDS 50.0%
AGCGGCATATTAGCAGGTGA+TGG - tig0016604:73430-73449 None:intergenic 50.0%
CCTAGTAGCGGCATATTAGC+AGG - tig0016604:73436-73455 None:intergenic 50.0%
CCTGCTAATATGCCGCTACT+AGG + tig0016604:73433-73452 Msa1358990:CDS 50.0%
GCTACTAGGATCCTTGCCAA+AGG + tig0016604:73447-73466 Msa1358990:CDS 50.0%
CTAGGATCCTTGCCAAAGGT+TGG + tig0016604:73451-73470 Msa1358990:CDS 50.0%
GATCCTTGCCAAAGGTTGGA+GGG + tig0016604:73455-73474 Msa1358990:CDS 50.0%
AAACCCTCCAACCTTTGGCA+AGG - tig0016604:73461-73480 None:intergenic 50.0%
! TTTCCTCCTCTTGGTGCACA+TGG + tig0016604:73478-73497 Msa1358990:CDS 50.0%
! TTCCTCCTCTTGGTGCACAT+GGG + tig0016604:73479-73498 Msa1358990:CDS 50.0%
GGTGGGCCACTAAACTGATT+TGG + tig0016604:73501-73520 Msa1358990:intron 50.0%
TTTGACATCCAACCAGCCAG+CGG - tig0016604:73636-73655 None:intergenic 50.0%
GTGGCACATCCATCAGTTTC+TGG + tig0016604:73666-73685 Msa1358990:CDS 50.0%
! GCACATCCATCAGTTTCTGG+AGG + tig0016604:73669-73688 Msa1358990:CDS 50.0%
! CATCCATCAGTTTCTGGAGG+AGG + tig0016604:73672-73691 Msa1358990:CDS 50.0%
! GTTTCTGGAGGAGGAGCTAT+AGG + tig0016604:73681-73700 Msa1358990:CDS 50.0%
! GGAGCTATAGGTCTTGGTGT+TGG + tig0016604:73693-73712 Msa1358990:CDS 50.0%
!! GCTATAGGTCTTGGTGTTGG+TGG + tig0016604:73696-73715 Msa1358990:CDS 50.0%
!! GGATTAGTTGGAGGTGTCCT+AGG - tig0016604:73899-73918 None:intergenic 50.0%
CCAGATGGGTAGTCAACAGA+AGG - tig0016604:73920-73939 None:intergenic 50.0%
! CCTTCTGTTGACTACCCATC+TGG + tig0016604:73917-73936 Msa1358990:CDS 50.0%
! GTTTTGTCAGCGACGTTTCC+GGG + tig0016604:74119-74138 Msa1358990:CDS 50.0%
AGGCTCTTCTCCTATGAGCA+TGG + tig0016604:74211-74230 Msa1358990:CDS 50.0%
GGATGGAAGTCCATGCTCAT+AGG - tig0016604:74224-74243 None:intergenic 50.0%
TGACTGATCTTCTCCCTCGA+TGG + tig0016604:74348-74367 Msa1358990:intron 50.0%
!! CTAGGGAACGGTTGGTCTTA+AGG + tig0016604:74423-74442 Msa1358990:CDS 50.0%
ACACGGTTGACAGAAACAGC+TGG - tig0016604:74624-74643 None:intergenic 50.0%
GGATGAAGTACGACAGCACT+TGG + tig0016604:74832-74851 Msa1358990:CDS 50.0%
TGAAGTACGACAGCACTTGG+AGG + tig0016604:74835-74854 Msa1358990:CDS 50.0%
ATTATGATGCTCCTGGTCGG+TGG + tig0016604:75488-75507 Msa1358990:CDS 50.0%
! TCATGTGGGACTAGCAAGGA+TGG + tig0016604:75671-75690 Msa1358990:CDS 50.0%
! CATGTGGGACTAGCAAGGAT+GGG + tig0016604:75672-75691 Msa1358990:CDS 50.0%
! ATGTGGGACTAGCAAGGATG+GGG + tig0016604:75673-75692 Msa1358990:CDS 50.0%
CCCACGCATCCGTTTCAATA+AGG + tig0016604:75985-76004 Msa1358990:CDS 50.0%
GCAGCAGTAGCAACTGACAT+GGG - tig0016604:76230-76249 None:intergenic 50.0%
TGCAGCAGTAGCAACTGACA+TGG - tig0016604:76231-76250 None:intergenic 50.0%
AGTAATAGCTGCCACAGACG+AGG - tig0016604:76276-76295 None:intergenic 50.0%
TCGTCTGTGGCAGCTATTAC+TGG + tig0016604:76275-76294 Msa1358990:CDS 50.0%
CTCATTAGAATGGGGATGCC+CGG + tig0016604:76525-76544 Msa1358990:intron 50.0%
TGATCGCAATTCATCCGGCA+AGG + tig0016604:77008-77027 Msa1358990:CDS 50.0%
CTTGAAGGTTGCCACAACTG+AGG - tig0016604:77158-77177 None:intergenic 50.0%
CAGTTGTGGCAACCTTCAAG+TGG + tig0016604:77158-77177 Msa1358990:CDS 50.0%
! GTCATCAGGATGCCACTTGA+AGG - tig0016604:77173-77192 None:intergenic 50.0%
AAAGCTAGAAAGGTTGCCGC+AGG - tig0016604:77428-77447 None:intergenic 50.0%
GCAATGGTACCTCATCTACG+CGG - tig0016604:77517-77536 None:intergenic 50.0%
! CTAGTTTCATCTGGGGCAGA+TGG + tig0016604:77679-77698 Msa1358990:CDS 50.0%
TCTTGCAATTTCCTGCTGGG+AGG + tig0016604:77926-77945 Msa1358990:CDS 50.0%
TCAGGATCAGTTCCGCTTCT+TGG + tig0016604:77987-78006 Msa1358990:CDS 50.0%
TGATACGGCATCGCAATCGA+AGG - tig0016604:78267-78286 None:intergenic 50.0%
GGATGTGCAGCAATTACGAG+CGG - tig0016604:78463-78482 None:intergenic 50.0%
TTTGAGCCCCTTGAGTCTGA+AGG + tig0016604:78535-78554 Msa1358990:CDS 50.0%
CACTTGCCTTCAGACTCAAG+GGG - tig0016604:78544-78563 None:intergenic 50.0%
CCACTTGCCTTCAGACTCAA+GGG - tig0016604:78545-78564 None:intergenic 50.0%
CCTTGAGTCTGAAGGCAAGT+GGG + tig0016604:78543-78562 Msa1358990:CDS 50.0%
CTTGAGTCTGAAGGCAAGTG+GGG + tig0016604:78544-78563 Msa1358990:CDS 50.0%
GTGCCTCCACCTATTGAGAA+TGG + tig0016604:78568-78587 Msa1358990:CDS 50.0%
GAGCCATTCTCAATAGGTGG+AGG - tig0016604:78574-78593 None:intergenic 50.0%
GCTGAGCCATTCTCAATAGG+TGG - tig0016604:78577-78596 None:intergenic 50.0%
GAATGGCTCAGCAAGCAATG+CGG + tig0016604:78585-78604 Msa1358990:CDS 50.0%
GGATCCTTGCCAAAGGTTGG+AGG + tig0016604:73454-73473 Msa1358990:CDS 55.0%
GGAGGAAACCCTCCAACCTT+TGG - tig0016604:73466-73485 None:intergenic 55.0%
GTTGGAGGGTTTCCTCCTCT+TGG + tig0016604:73469-73488 Msa1358990:CDS 55.0%
! TCCTCCTCTTGGTGCACATG+GGG + tig0016604:73480-73499 Msa1358990:CDS 55.0%
! GGTGCTGGAGTTGGCTGAAA+AGG - tig0016604:73603-73622 None:intergenic 55.0%
!! ATTGGCACAGGTGCTGGAGT+TGG - tig0016604:73612-73631 None:intergenic 55.0%
GATGGATGTGCCACGGTAGT+AGG - tig0016604:73660-73679 None:intergenic 55.0%
GCTCCTCCTCCAGAAACTGA+TGG - tig0016604:73678-73697 None:intergenic 55.0%
GGAGGAGGAGCTATAGGTCT+TGG + tig0016604:73687-73706 Msa1358990:CDS 55.0%
! GTTGGTGGACCTTCAATGCC+CGG + tig0016604:73711-73730 Msa1358990:CDS 55.0%
ACGTTTCCGGGTCATGGTCA+TGG + tig0016604:74131-74150 Msa1358990:CDS 55.0%
!! GGGAATTGGGCTCTAGGGAA+CGG + tig0016604:74411-74430 Msa1358990:CDS 55.0%
!! ATTGGGCTCTAGGGAACGGT+TGG + tig0016604:74415-74434 Msa1358990:CDS 55.0%
CGTCTGGACTCCAAGTCACA+CGG - tig0016604:74641-74660 None:intergenic 55.0%
! CGTGTGACTTGGAGTCCAGA+CGG + tig0016604:74639-74658 Msa1358990:CDS 55.0%
! GTGTGACTTGGAGTCCAGAC+GGG + tig0016604:74640-74659 Msa1358990:CDS 55.0%
! TGTGACTTGGAGTCCAGACG+GGG + tig0016604:74641-74660 Msa1358990:CDS 55.0%
!! AGTCCAGACGGGGCTTTGTT+CGG + tig0016604:74651-74670 Msa1358990:CDS 55.0%
TAACCGAACAAAGCCCCGTC+TGG - tig0016604:74657-74676 None:intergenic 55.0%
GTCGTACTTCATCCCCACCA+TGG - tig0016604:74826-74845 None:intergenic 55.0%
CAGCTATGCGTGATCACCTG+TGG + tig0016604:75007-75026 Msa1358990:CDS 55.0%
AAGGTGTGGGATGCTGCAAC+CGG + tig0016604:75128-75147 Msa1358990:intron 55.0%
ATGGTTGTACACCACCGACC+AGG - tig0016604:75502-75521 None:intergenic 55.0%
TGGTCGGTGGTGTACAACCA+TGG + tig0016604:75501-75520 Msa1358990:CDS 55.0%
ACTTGAGAGAGCCTCGTCTG+TGG + tig0016604:76262-76281 Msa1358990:CDS 55.0%
AATGGGGATGCCCGGAACTT+AGG + tig0016604:76533-76552 Msa1358990:CDS 55.0%
CTAGTGTGCCACCTCAGTTG+TGG + tig0016604:77144-77163 Msa1358990:CDS 55.0%
GAAGGTTGCCACAACTGAGG+TGG - tig0016604:77155-77174 None:intergenic 55.0%
! TACGTAATGTCGGCATCGGG+TGG + tig0016604:77260-77279 Msa1358990:CDS 55.0%
! ACGTAATGTCGGCATCGGGT+GGG + tig0016604:77261-77280 Msa1358990:CDS 55.0%
! TTCATCTGGGGCAGATGGTC+AGG + tig0016604:77684-77703 Msa1358990:CDS 55.0%
CACCTGCACAGGCAGATACA+CGG + tig0016604:77953-77972 Msa1358990:CDS 55.0%
ACCTGCACAGGCAGATACAC+GGG + tig0016604:77954-77973 Msa1358990:CDS 55.0%
GGATCAGTTCCGCTTCTTGG+TGG + tig0016604:77990-78009 Msa1358990:CDS 55.0%
ATTGGTGCAGCAGCATCTCG+CGG - tig0016604:78160-78179 None:intergenic 55.0%
CCCTTGAGTCTGAAGGCAAG+TGG + tig0016604:78542-78561 Msa1358990:CDS 55.0%
CCCACTTGCCTTCAGACTCA+AGG - tig0016604:78546-78565 None:intergenic 55.0%
GATGGAGCCCGTGCACCATT+TGG - tig0016604:73412-73431 None:intergenic 60.0%
ACCCCATGTGCACCAAGAGG+AGG - tig0016604:73484-73503 None:intergenic 60.0%
! TCCTCTTGGTGCACATGGGG+TGG + tig0016604:73483-73502 Msa1358990:intron 60.0%
! CCTCTTGGTGCACATGGGGT+GGG + tig0016604:73484-73503 Msa1358990:intron 60.0%
ATCCAACCAGCCAGCGGCAT+TGG - tig0016604:73630-73649 None:intergenic 60.0%
TCAGCGACGTTTCCGGGTCA+TGG + tig0016604:74125-74144 Msa1358990:CDS 60.0%
TGATGCTGATGGGGGTCTCC+CGG + tig0016604:75877-75896 Msa1358990:CDS 60.0%
CTGAGGTGGCACACTAGCAG+TGG - tig0016604:77141-77160 None:intergenic 60.0%
GTTCATGCCACCACCACCTG+CGG + tig0016604:77409-77428 Msa1358990:CDS 60.0%
AGAAAGGTTGCCGCAGGTGG+TGG - tig0016604:77422-77441 None:intergenic 60.0%
GCTAGAAAGGTTGCCGCAGG+TGG - tig0016604:77425-77444 None:intergenic 60.0%
CGTGTATCTGCCTGTGCAGG+TGG - tig0016604:77955-77974 None:intergenic 60.0%
ACCCGTGTATCTGCCTGTGC+AGG - tig0016604:77958-77977 None:intergenic 60.0%
TTGGTGCAGCAGCATCTCGC+GGG - tig0016604:78159-78178 None:intergenic 60.0%
CCCACCCCATGTGCACCAAG+AGG - tig0016604:73487-73506 None:intergenic 65.0%
!! AGCGGCATTGGCACAGGTGC+TGG - tig0016604:73618-73637 None:intergenic 65.0%
AGCACCTGTGCCAATGCCGC+TGG + tig0016604:73617-73636 Msa1358990:CDS 65.0%
! TGCCAATGCCGCTGGCTGGT+TGG + tig0016604:73625-73644 Msa1358990:CDS 65.0%
TCCGGGTCATGGTCATGGCC+AGG + tig0016604:74136-74155 Msa1358990:CDS 65.0%
GCCTGGCCATGACCATGACC+CGG - tig0016604:74140-74159 None:intergenic 65.0%
GCACACTAGCAGTGGCCTGC+AGG - tig0016604:77133-77152 None:intergenic 65.0%
! AAGGTTGCCGCAGGTGGTGG+TGG - tig0016604:77419-77438 None:intergenic 65.0%
TGGGAGGACTCCACCTGCAC+AGG + tig0016604:77942-77961 Msa1358990:CDS 65.0%
!! CCAGCCAGCGGCATTGGCAC+AGG - tig0016604:73624-73643 None:intergenic 70.0%
CCTGTGCCAATGCCGCTGGC+TGG + tig0016604:73621-73640 Msa1358990:CDS 70.0%
GCAGGTGGAGTCCTCCCAGC+AGG - tig0016604:77940-77959 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0016604 gene 71605 78667 71605 ID=Msa1358990;Name=Msa1358990
tig0016604 mRNA 71605 78667 71605 ID=Msa1358990-mRNA-1;Parent=Msa1358990;Name=Msa1358990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=121|1|1|1|0.96|1|26|16|1133
tig0016604 exon 71605 71667 71605 ID=Msa1358990-mRNA-1:exon:11123;Parent=Msa1358990-mRNA-1
tig0016604 exon 72007 72144 72007 ID=Msa1358990-mRNA-1:exon:11124;Parent=Msa1358990-mRNA-1
tig0016604 exon 72274 72453 72274 ID=Msa1358990-mRNA-1:exon:11125;Parent=Msa1358990-mRNA-1
tig0016604 exon 72576 72689 72576 ID=Msa1358990-mRNA-1:exon:11126;Parent=Msa1358990-mRNA-1
tig0016604 exon 72780 72938 72780 ID=Msa1358990-mRNA-1:exon:11127;Parent=Msa1358990-mRNA-1
tig0016604 exon 73324 73501 73324 ID=Msa1358990-mRNA-1:exon:11128;Parent=Msa1358990-mRNA-1
tig0016604 exon 73600 73732 73600 ID=Msa1358990-mRNA-1:exon:11129;Parent=Msa1358990-mRNA-1
tig0016604 exon 73882 73991 73882 ID=Msa1358990-mRNA-1:exon:11130;Parent=Msa1358990-mRNA-1
tig0016604 exon 74101 74266 74101 ID=Msa1358990-mRNA-1:exon:11131;Parent=Msa1358990-mRNA-1
tig0016604 exon 74381 74490 74381 ID=Msa1358990-mRNA-1:exon:11132;Parent=Msa1358990-mRNA-1
tig0016604 exon 74603 74672 74603 ID=Msa1358990-mRNA-1:exon:11133;Parent=Msa1358990-mRNA-1
tig0016604 exon 74783 74856 74783 ID=Msa1358990-mRNA-1:exon:11134;Parent=Msa1358990-mRNA-1
tig0016604 exon 74953 75048 74953 ID=Msa1358990-mRNA-1:exon:11135;Parent=Msa1358990-mRNA-1
tig0016604 exon 75131 75226 75131 ID=Msa1358990-mRNA-1:exon:11136;Parent=Msa1358990-mRNA-1
tig0016604 exon 75418 75545 75418 ID=Msa1358990-mRNA-1:exon:11137;Parent=Msa1358990-mRNA-1
tig0016604 exon 75664 75898 75664 ID=Msa1358990-mRNA-1:exon:11138;Parent=Msa1358990-mRNA-1
tig0016604 exon 75980 76141 75980 ID=Msa1358990-mRNA-1:exon:11139;Parent=Msa1358990-mRNA-1
tig0016604 exon 76215 76301 76215 ID=Msa1358990-mRNA-1:exon:11140;Parent=Msa1358990-mRNA-1
tig0016604 exon 76533 76679 76533 ID=Msa1358990-mRNA-1:exon:11141;Parent=Msa1358990-mRNA-1
tig0016604 exon 76919 77029 76919 ID=Msa1358990-mRNA-1:exon:11142;Parent=Msa1358990-mRNA-1
tig0016604 exon 77137 77316 77137 ID=Msa1358990-mRNA-1:exon:11143;Parent=Msa1358990-mRNA-1
tig0016604 exon 77398 77526 77398 ID=Msa1358990-mRNA-1:exon:11144;Parent=Msa1358990-mRNA-1
tig0016604 exon 77610 77705 77610 ID=Msa1358990-mRNA-1:exon:11145;Parent=Msa1358990-mRNA-1
tig0016604 exon 77880 78068 77880 ID=Msa1358990-mRNA-1:exon:11146;Parent=Msa1358990-mRNA-1
tig0016604 exon 78151 78317 78151 ID=Msa1358990-mRNA-1:exon:11147;Parent=Msa1358990-mRNA-1
tig0016604 exon 78447 78667 78447 ID=Msa1358990-mRNA-1:exon:11148;Parent=Msa1358990-mRNA-1
tig0016604 five_prime_UTR 71605 71667 71605 ID=Msa1358990-mRNA-1:five_prime_utr;Parent=Msa1358990-mRNA-1
tig0016604 five_prime_UTR 72007 72064 72007 ID=Msa1358990-mRNA-1:five_prime_utr;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72065 72144 72065 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72274 72453 72274 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72576 72689 72576 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 72780 72938 72780 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 73324 73501 73324 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 73600 73732 73600 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 73882 73991 73882 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74101 74266 74101 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74381 74490 74381 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74603 74672 74603 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74783 74856 74783 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 74953 75048 74953 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75131 75226 75131 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75418 75545 75418 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75664 75898 75664 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 75980 76141 75980 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 76215 76301 76215 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 76533 76679 76533 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 76919 77029 76919 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77137 77316 77137 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77398 77526 77398 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77610 77705 77610 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 77880 78068 77880 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 78151 78317 78151 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 CDS 78447 78651 78447 ID=Msa1358990-mRNA-1:cds;Parent=Msa1358990-mRNA-1
tig0016604 three_prime_UTR 78652 78667 78652 ID=Msa1358990-mRNA-1:three_prime_utr;Parent=Msa1358990-mRNA-1
Gene Sequence

>Msa1358990

ATGTCATCTCTCAGTAGGGAGTTGGTGTTCTTGATCTTGCAGTTTCTTGAGGAGGAAAAGTTCAAAGAGGCTGTTCATAAGCTTGAACAGGAATCAGGGTTTTACTTCAACATGAAGTACTTTGAAGATGAAGTGCATAATGGGAATTGGGATGAGGTTGAGAAGTACCTCTCTGGTTTCACTAAAGTTGATGATAATAGGTATTCTATGAAGATATTTTTCGAGATAAGGAAGCAGAAGTATCTCGAGGCATTGGACAAGCATGATCGGTCCAAGGGTGTCGAAATACTAGTGAAGGATTTGAAAGTGTTTTCTACATTTAATGAAGAGTTGTTCAAGGAGATCACACAGCTTTTAACACTGGAGAATTTTAGGGAAAATGAACAATTGTCCAAGTATGGTGATACGAAGTCTGCGAGAGCAATCATGTTGGTTGAACTCAAAAAGTTGATTGAGGCAAATCCCTTATTTCGCGACAAATTGCAATTTCCCAACCTTAAGAACTCAAGGTTGCGAACTCTCATCAATCAAAGCTTGAATTGGCAGCATCAACTTTGTAAGAATCCACGGCCAAATCCAGATATAAAAACTCTTTTTGTGGATCACTCTTGTGGACAACCAAATGGTGCACGGGCTCCATCACCTGCTAATATGCCGCTACTAGGATCCTTGCCAAAGGTTGGAGGGTTTCCTCCTCTTGGTGCACATGGGCCTTTTCAGCCAACTCCAGCACCTGTGCCAATGCCGCTGGCTGGTTGGATGTCAAATCCTACTACCGTGGCACATCCATCAGTTTCTGGAGGAGGAGCTATAGGTCTTGGTGTTGGTGGACCTTCAATGCCCGCTGCTTTGAAGCATCCTAGGACACCTCCAACTAATCCTTCTGTTGACTACCCATCTGGGGATTCAGATCACATTTCTAAGAGAACAAGACCAATAGGAATGTCTGATGAGGGAAATCTACCTGTTAATGTTTTGTCAGCGACGTTTCCGGGTCATGGTCATGGCCAGGCTTTTAATTCACCGGATGACTTGCCAAAGACAGTCTTGCGAACTCTAAATCAAGGCTCTTCTCCTATGAGCATGGACTTCCATCCAGTTCAACAGACTTTACTTCTTGTTGGTACAAATGTGGCAGACATTGGTTTATGGGAATTGGGCTCTAGGGAACGGTTGGTCTTAAGGAACTTCAAAGTTTGGGATCTGAGTGCTTGTTCAATGCCATTTCAGGCTGCTCTTGTCAAAGATCCAGCTGTTTCTGTCAACCGTGTGACTTGGAGTCCAGACGGGGCTTTGTTCGGAGTTGCTTATTCAAGGCACATTGTTCAGATATACTCTTACCATGGTGGGGATGAAGTACGACAGCACTTGGAGATTGATGCCCATGTTGGCGGAGTAAATGATCTAGCATTTTCTCACCCAAATAAGCAGCTATGCGTGATCACCTGTGGTGATGATAAAACTATTAAGGTGTGGGATGCTGCAACCGGTATAAAACAGTACACTTTTGAAGGTCATGAGGCTCCCGTTTATTCTGTCTGCCCACATTATAAAGAAAACATTCAGTTCATCTTTTCAACGGCATTAGATGGAAAGATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGATTATGATGCTCCTGGTCGGTGGTGTACAACCATGGCTTATAGTGCTGATGGTACAAGGCTCTTTTCATGTGGGACTAGCAAGGATGGGGAATCCTCTATTGTTGAATGGAATGAAAGTGAAGGAGCTGTGAAAAGGACATACCAAGGATTTCGGAAGCGATCTTTGGGTGTTGTACAATTTGATACGACCAAAAATCGGTATCTGGCTGCTGGTGATGATTTCTCCATTAAATTTTGGGATATGGACAATATCCAGCTTTTGACAACTGTTGATGCTGATGGGGGTCTCCCGGCAAGCCCACGCATCCGTTTCAATAAGGAAGGATCTCTTTTAGCTGTCTCTGCAAATGAGAATGGAATTAAAATCTTGGCCAATGGAGATGGTGTTCGTTTGTTGCGCTCGTTAGAGAATTCCTCATATGATGCATCAAGAACACCAGAAACCATGACAAAGCCTATAATAAATCCCATGTCAGTTGCTACTGCTGCAACTAGTGCTGCACTTGAGAGAGCCTCGTCTGTGGCAGCTATTACTGGAATGAATGGGGATGCCCGGAACTTAGGTGATATTAAACCTAGAATAAGTGAAGAATCCAATGACAAGTCAAAGATATGGAAGCTCACTGAAATCAATGAACCGTCTCATTGTAGATCCTTGAAGCTACCTGAGAATGCAAGAGTCACAAAGATATCGAGGTTGATATATACTAATTCAGGTAATGCTATTCTGGCATTAGCTTCAAATGCCATTCATCTTCTCTGGAAGTGGCAACGAAATGATCGCAATTCATCCGGCAAGGCCACTGCTAGTGTGCCACCTCAGTTGTGGCAACCTTCAAGTGGCATCCTGATGACTAATGACGTTAATGATAACAATACTGAGGATGCAGTCCCATGCTTTGCTCTTTCCAAAAATGATTCTTACGTAATGTCGGCATCGGGTGGGAAGATTTCTCTGTTCAATATGATGACTTTTAAGACAATGACAACGTTCATGCCACCACCACCTGCGGCAACCTTTCTAGCTTTCCATCCTCAAGATAACAATATTATTGCTATAGGCATGGATGATTCTTCCATTCAGATATATAATGTCCGCGTAGATGAGGTTAAAAGTAAACTCAAAGGCCATACTAAAAGAATAACTGGTCTTGCATTTTCTCATGTACTGAATGTGCTAGTTTCATCTGGGGCAGATGGTCAGATTTTTGTATGGAATACTGATGGGTGGGAGAAGCAGAAGAATAGATTCTTGCAATTTCCTGCTGGGAGGACTCCACCTGCACAGGCAGATACACGGGTACAATTTCATCAGGATCAGTTCCGCTTCTTGGTGGTACATGAAACTCAGCTTGCCATTTATGAAGCAACAAAACTGGAATGTTTAAAGCAGTGGTTCCCGCGAGATGCTGCTGCACCAATATCACATGCAACTTTCTCATGTGATAGCAACTTGATATTTGCCAGCTTTTTAGATGCAACAATCTGTGTGTTCAGTGCTTCAAACCTTCGATTGCGATGCCGTATCAATCCTTCTGCTTATCTTTCCGCAAATGTCAGTTCTAACATTCAACCGCTCGTAATTGCTGCACATCCACACGAACCAAATCAGTTTGCTGTTGGACTGTCAGATGGCATAGTTCATGTGTTTGAGCCCCTTGAGTCTGAAGGCAAGTGGGGTGTGCCTCCACCTATTGAGAATGGCTCAGCAAGCAATGCGGTAGCTAATTCGGTTGGTGCTTCTTCTGATGAAGTCCAAAGATGA

Protein sequence

>Msa1358990

MSSLSRELVFLILQFLEEEKFKEAVHKLEQESGFYFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKGVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANMPLLGSLPKVGGFPPLGAHGPFQPTPAPVPMPLAGWMSNPTTVAHPSVSGGGAIGLGVGGPSMPAALKHPRTPPTNPSVDYPSGDSDHISKRTRPIGMSDEGNLPVNVLSATFPGHGHGQAFNSPDDLPKTVLRTLNQGSSPMSMDFHPVQQTLLLVGTNVADIGLWELGSRERLVLRNFKVWDLSACSMPFQAALVKDPAVSVNRVTWSPDGALFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGIKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDNIQLLTTVDADGGLPASPRIRFNKEGSLLAVSANENGIKILANGDGVRLLRSLENSSYDASRTPETMTKPIINPMSVATAATSAALERASSVAAITGMNGDARNLGDIKPRISEESNDKSKIWKLTEINEPSHCRSLKLPENARVTKISRLIYTNSGNAILALASNAIHLLWKWQRNDRNSSGKATASVPPQLWQPSSGILMTNDVNDNNTEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRITGLAFSHVLNVLVSSGADGQIFVWNTDGWEKQKNRFLQFPAGRTPPAQADTRVQFHQDQFRFLVVHETQLAIYEATKLECLKQWFPRDAAAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLSANVSSNIQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENGSASNAVANSVGASSDEVQR*