Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360470 | XP_003621742.1 | 97.782 | 541 | 12 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360470 | sp|Q9C509|SGPL_ARATH | 80.222 | 541 | 104 | 1 | 1 | 538 | 1 | 541 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360470 | G7KUR3 | 97.782 | 541 | 12 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1101 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1052350 | Msa1360470 | 0.979244 | 1.519083e-147 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360470 | MtrunA17_Chr7g0222381 | 97.782 | 541 | 12 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1101 |
| Msa1360470 | MtrunA17_Chr3g0109901 | 25.549 | 364 | 239 | 12 | 157 | 499 | 81 | 433 | 4.67e-23 | 102 |
| Msa1360470 | MtrunA17_Chr8g0375301 | 26.111 | 360 | 243 | 8 | 157 | 499 | 81 | 434 | 2.03e-22 | 100 |
| Msa1360470 | MtrunA17_Chr5g0433931 | 25.882 | 340 | 228 | 10 | 177 | 499 | 6 | 338 | 6.90e-22 | 98.2 |
| Msa1360470 | MtrunA17_Chr6g0480631 | 26.099 | 364 | 237 | 11 | 157 | 499 | 84 | 436 | 1.28e-19 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360470 | AT1G27980.1 | 80.222 | 541 | 104 | 1 | 1 | 538 | 1 | 541 | 0.0 | 882 |
| Msa1360470 | AT5G17330.1 | 26.111 | 360 | 242 | 10 | 157 | 499 | 81 | 433 | 7.12e-25 | 108 |
| Msa1360470 | AT3G17760.2 | 27.198 | 364 | 233 | 12 | 159 | 501 | 82 | 434 | 1.82e-24 | 107 |
| Msa1360470 | AT3G17760.1 | 27.198 | 364 | 233 | 12 | 159 | 501 | 82 | 434 | 1.82e-24 | 107 |
| Msa1360470 | AT1G65960.2 | 25.245 | 408 | 272 | 13 | 157 | 539 | 80 | 479 | 2.76e-23 | 103 |
| Msa1360470 | AT1G65960.1 | 26.331 | 338 | 222 | 10 | 222 | 539 | 20 | 350 | 3.89e-21 | 95.5 |
| Msa1360470 | AT1G65960.3 | 26.331 | 338 | 222 | 10 | 222 | 539 | 20 | 350 | 3.89e-21 | 95.5 |
| Msa1360470 | AT1G65960.4 | 26.331 | 338 | 222 | 10 | 222 | 539 | 20 | 350 | 3.89e-21 | 95.5 |
| Msa1360470 | AT2G02000.1 | 25.070 | 359 | 247 | 9 | 157 | 499 | 81 | 433 | 2.98e-20 | 94.4 |
| Msa1360470 | AT2G02010.1 | 26.039 | 361 | 241 | 11 | 157 | 499 | 81 | 433 | 7.74e-20 | 93.2 |
| Msa1360470 | AT2G02010.2 | 26.184 | 359 | 239 | 11 | 159 | 499 | 135 | 485 | 1.11e-19 | 92.8 |
Find 149 sgRNAs with CRISPR-Local
Find 739 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTAAATCATATATTATT+TGG | 0.181570 | tig0017080:-15734 | Msa1360470:intergenic |
| GGACTTTCTAAGGGATTTAA+AGG | 0.202629 | tig0017080:+14527 | Msa1360470:CDS |
| GGGTTTGGTAATTCCTTTCT+TGG | 0.208146 | tig0017080:-10062 | Msa1360470:intergenic |
| AATCTGATGGTAAATCTAAA+AGG | 0.217793 | tig0017080:+7594 | Msa1360470:CDS |
| CTCTTACCTTTCTGATTTCA+TGG | 0.219215 | tig0017080:-11318 | Msa1360470:intergenic |
| TCAGTGGATGTGCATAAATA+TGG | 0.239511 | tig0017080:+11256 | Msa1360470:CDS |
| TTATTAGTGGCATACATTTC+GGG | 0.259723 | tig0017080:-10082 | Msa1360470:intergenic |
| GGAAAATACAAAAGCAATTA+TGG | 0.264522 | tig0017080:+14104 | Msa1360470:CDS |
| GGTGCTAGTCCTCCAGTTAT+TGG | 0.290351 | tig0017080:-15548 | Msa1360470:intergenic |
| AGAGCACATAAAATGATAAA+TGG | 0.295408 | tig0017080:-15941 | Msa1360470:intergenic |
| CATTCATTATACAGGTTACT+TGG | 0.296590 | tig0017080:+14083 | Msa1360470:intron |
| GATATGACAATCGTGGCTTT+TGG | 0.313147 | tig0017080:+14269 | Msa1360470:CDS |
| CAGTTATTGAGGACTTTCTA+AGG | 0.314136 | tig0017080:+14517 | Msa1360470:CDS |
| TAAAACAACACTTGTTCCTT+TGG | 0.317168 | tig0017080:-11287 | Msa1360470:intergenic |
| TTTGGAGTTATTCATGATAA+AGG | 0.321605 | tig0017080:+6145 | Msa1360470:CDS |
| TCCTGGACCATTCCTCTATC+TGG | 0.330541 | tig0017080:-15596 | Msa1360470:intergenic |
| CAGTTAGTTGGATCTTCTCC+TGG | 0.331063 | tig0017080:+10460 | Msa1360470:intron |
| CATGTGGACCTTTGCCTTGG+TGG | 0.352680 | tig0017080:+10657 | Msa1360470:CDS |
| ACTGAAGAAACTTACTTTGA+TGG | 0.352789 | tig0017080:-10506 | Msa1360470:intergenic |
| CTTAGAAAGTCCTCAATAAC+TGG | 0.360250 | tig0017080:-14516 | Msa1360470:intergenic |
| GAAAATCCTGGTCCAATAAC+TGG | 0.361743 | tig0017080:+15536 | Msa1360470:CDS |
| CTACAGCATCAATTTGTTGC+AGG | 0.362959 | tig0017080:+13613 | Msa1360470:intron |
| GCACCAGCAATAAGGCTTCC+AGG | 0.364217 | tig0017080:-13882 | Msa1360470:intergenic |
| AAAGATAACGTTGATGGATT+AGG | 0.369255 | tig0017080:-5949 | Msa1360470:intergenic |
| AGTGGCATACATTTCGGGTT+TGG | 0.373722 | tig0017080:-10077 | Msa1360470:intergenic |
| CAATTTCTTCTGTAGGAACT+TGG | 0.377488 | tig0017080:+10603 | Msa1360470:intron |
| AAAACAACACTTGTTCCTTT+GGG | 0.380643 | tig0017080:-11286 | Msa1360470:intergenic |
| AGTAAAATCATAAGGTTGAA+TGG | 0.392890 | tig0017080:-11212 | Msa1360470:intergenic |
| AAATGAAAAGATAACGTTGA+TGG | 0.392911 | tig0017080:-5955 | Msa1360470:intergenic |
| CCAGAGTGTTGTACGCTTTG+AGG | 0.394893 | tig0017080:+9901 | Msa1360470:CDS |
| TGCATTCAGATGCCAACCTT+TGG | 0.395975 | tig0017080:-14336 | Msa1360470:intergenic |
| TCCAGGTCTGCTTCCAGCTA+TGG | 0.397299 | tig0017080:-13865 | Msa1360470:intergenic |
| ACACACCAATCCCTTGCATT+TGG | 0.401416 | tig0017080:+9871 | Msa1360470:CDS |
| GTAAAATCATAAGGTTGAAT+GGG | 0.403589 | tig0017080:-11211 | Msa1360470:intergenic |
| TAAAATCGACCAACAATTCC+TGG | 0.404074 | tig0017080:-15613 | Msa1360470:intergenic |
| GAGTTGCCAAGCATGGGATT+GGG | 0.404828 | tig0017080:+7632 | Msa1360470:CDS |
| CTGAAGAAACTTACTTTGAT+GGG | 0.406395 | tig0017080:-10505 | Msa1360470:intergenic |
| CATTTGATAATGCAGTTAGT+TGG | 0.408051 | tig0017080:+10448 | Msa1360470:intron |
| GGAGGACTAGCACCTATATA+TGG | 0.414884 | tig0017080:+15557 | Msa1360470:CDS |
| AGAGTTGCCAAGCATGGGAT+TGG | 0.420180 | tig0017080:+7631 | Msa1360470:CDS |
| ATTCCCGAGTTGTTTATCAT+TGG | 0.434818 | tig0017080:+14239 | Msa1360470:CDS |
| AGAAAAGAAATGATGCAGTT+TGG | 0.437721 | tig0017080:+7684 | Msa1360470:CDS |
| TACAGGATAATTCCTGAGTC+TGG | 0.443363 | tig0017080:+10168 | Msa1360470:intron |
| GGTAGTAAAGAAAAGACATC+TGG | 0.444723 | tig0017080:+9956 | Msa1360470:CDS |
| ATTCCCCAGTCCAACCTGTT+GGG | 0.447758 | tig0017080:-14368 | Msa1360470:intergenic |
| GCAATGACAGCGGCACTTCT+CGG | 0.448527 | tig0017080:+9935 | Msa1360470:CDS |
| ATCTGATGGTAAATCTAAAA+GGG | 0.450651 | tig0017080:+7595 | Msa1360470:CDS |
| TTCCATGTGGACCTTTGCCT+TGG | 0.452562 | tig0017080:+10654 | Msa1360470:CDS |
| TCTTCTCCTGGGTTTCCACA+TGG | 0.452893 | tig0017080:+10472 | Msa1360470:CDS |
| AAAGCCACGATTGTCATATC+AGG | 0.454248 | tig0017080:-14266 | Msa1360470:intergenic |
| TATGTATCTCCAACCATAGC+TGG | 0.457040 | tig0017080:+13852 | Msa1360470:CDS |
| AGACCTGGAAGCCTTATTGC+TGG | 0.458765 | tig0017080:+13879 | Msa1360470:CDS |
| TTCCCAGCGGCACCATATAT+AGG | 0.459272 | tig0017080:-15569 | Msa1360470:intergenic |
| GAAGCCTTATTGCTGGTGCA+TGG | 0.460232 | tig0017080:+13886 | Msa1360470:CDS |
| GCACCTATATATGGTGCCGC+TGG | 0.468031 | tig0017080:+15566 | Msa1360470:CDS |
| TGAGTAACTTCATACCATAA+TGG | 0.471107 | tig0017080:-10307 | Msa1360470:intergenic |
| CCTTTAACAGTAAAATCATA+AGG | 0.471720 | tig0017080:-11220 | Msa1360470:intergenic |
| GGATGGCACATGCTAGTTTG+TGG | 0.482481 | tig0017080:+15637 | Msa1360470:exon |
| TCGATGCACACACAAAGAAC+AGG | 0.483333 | tig0017080:-15823 | Msa1360470:intergenic |
| AAATCATATATTATTTGGTA+GGG | 0.484080 | tig0017080:-15729 | Msa1360470:intergenic |
| ACCATAGCTGGAAGCAGACC+TGG | 0.488785 | tig0017080:+13864 | Msa1360470:CDS |
| AGGAATGGTCCAGGAATTGT+TGG | 0.489274 | tig0017080:+15604 | Msa1360470:CDS |
| TTTATTTCTTGCAGTTACAT+TGG | 0.490125 | tig0017080:+7876 | Msa1360470:intron |
| TACCCAAGCTCACGAGCAAA+AGG | 0.490497 | tig0017080:-10690 | Msa1360470:intergenic |
| CAGATTGATCCCTGGTGTGA+AGG | 0.491686 | tig0017080:+6367 | Msa1360470:intron |
| TGGGCGGCAATGATATCTCT+AGG | 0.494586 | tig0017080:+13906 | Msa1360470:CDS |
| ATTTCTTGCAGTTACATTGG+AGG | 0.498427 | tig0017080:+7879 | Msa1360470:intron |
| ATGCATTGCAGAGACCCAAC+AGG | 0.508371 | tig0017080:+14354 | Msa1360470:CDS |
| TTGTCAGTTACTGAGTGGTC+CGG | 0.511519 | tig0017080:+13822 | Msa1360470:intron |
| TAAATCATATATTATTTGGT+AGG | 0.514947 | tig0017080:-15730 | Msa1360470:intergenic |
| CTTCTCCTGGGTTTCCACAT+GGG | 0.515573 | tig0017080:+10473 | Msa1360470:CDS |
| TACATCCAAATGCAAGGGAT+TGG | 0.516252 | tig0017080:-9876 | Msa1360470:intergenic |
| AGTTAGTTGGATCTTCTCCT+GGG | 0.517683 | tig0017080:+10461 | Msa1360470:intron |
| TACATTGGAGGAGATGAGTC+TGG | 0.518337 | tig0017080:+7891 | Msa1360470:CDS |
| GGTCAACTAGCATCAAACTT+TGG | 0.523108 | tig0017080:+10624 | Msa1360470:CDS |
| GTAAATCTAAAAGGGATGGT+TGG | 0.524550 | tig0017080:+7603 | Msa1360470:CDS |
| TCTATATAACCCTTCACACC+AGG | 0.526561 | tig0017080:-6377 | Msa1360470:intergenic |
| GCTGTAGTGTCACACAGATA+TGG | 0.531746 | tig0017080:-14488 | Msa1360470:intergenic |
| GTTTGGCAAGGCAAATGCTC+TGG | 0.531950 | tig0017080:+7701 | Msa1360470:CDS |
| AATCATATATTATTTGGTAG+GGG | 0.533301 | tig0017080:-15728 | Msa1360470:intergenic |
| GATGTCCCCAATCCCATGCT+TGG | 0.533655 | tig0017080:-7638 | Msa1360470:intergenic |
| ATGATATCTCTAGGGAAAGA+AGG | 0.534425 | tig0017080:+13915 | Msa1360470:CDS |
| AGTTATTGAGGACTTTCTAA+GGG | 0.535615 | tig0017080:+14518 | Msa1360470:CDS |
| TCATTGCTTTCTTCGCACAA+TGG | 0.537559 | tig0017080:+5988 | Msa1360470:exon |
| ATATGTGGCAACATGACATC+AGG | 0.537825 | tig0017080:+9986 | Msa1360470:CDS |
| AAGACAGAGTTGCCAAGCAT+GGG | 0.538646 | tig0017080:+7626 | Msa1360470:CDS |
| AGATTGATCCCTGGTGTGAA+GGG | 0.540818 | tig0017080:+6368 | Msa1360470:intron |
| GGTCTGCTTCCAGCTATGGT+TGG | 0.541023 | tig0017080:-13861 | Msa1360470:intergenic |
| AGTCCTCCAGTTATTGGACC+AGG | 0.544945 | tig0017080:-15542 | Msa1360470:intergenic |
| GCTGGGAAGATGCCAGATAG+AGG | 0.551836 | tig0017080:+15584 | Msa1360470:CDS |
| GAAGACAGAGTTGCCAAGCA+TGG | 0.552651 | tig0017080:+7625 | Msa1360470:CDS |
| AAGCCTTATTGCTGGTGCAT+GGG | 0.553317 | tig0017080:+13887 | Msa1360470:CDS |
| CACCTATATATGGTGCCGCT+GGG | 0.554355 | tig0017080:+15567 | Msa1360470:CDS |
| AGTTGCCAAGCATGGGATTG+GGG | 0.554863 | tig0017080:+7633 | Msa1360470:CDS |
| CCTCAAAGCGTACAACACTC+TGG | 0.555245 | tig0017080:-9901 | Msa1360470:intergenic |
| GGAACAAGAAGAAGAGTGAG+AGG | 0.555347 | tig0017080:-6082 | Msa1360470:intergenic |
| ACAGCATGTACCAGTTATTG+AGG | 0.558211 | tig0017080:+14506 | Msa1360470:CDS |
| CCTTATTGCTGGTGCATGGG+CGG | 0.558273 | tig0017080:+13890 | Msa1360470:CDS |
| AGGGGTTACTTCAATATCAG+TGG | 0.564171 | tig0017080:+11240 | Msa1360470:CDS |
| ATATCATGTCATCCAAAGGT+TGG | 0.567247 | tig0017080:+14324 | Msa1360470:CDS |
| ATCATATATTATTTGGTAGG+GGG | 0.567253 | tig0017080:-15727 | Msa1360470:intergenic |
| GTGGATAAGTTACAATCTGA+TGG | 0.567660 | tig0017080:+7581 | Msa1360470:CDS |
| CTCATTTGTCAGTTACTGAG+TGG | 0.567882 | tig0017080:+13817 | Msa1360470:intron |
| GCCAGATAGAGGAATGGTCC+AGG | 0.569654 | tig0017080:+15595 | Msa1360470:CDS |
| GATTATATGAAATCCAAGAA+AGG | 0.570934 | tig0017080:+10049 | Msa1360470:CDS |
| TTTCAGGTGAAAGAAAATCC+TGG | 0.572066 | tig0017080:+15524 | Msa1360470:intron |
| CTGGAATACATCCAAATGCA+AGG | 0.579196 | tig0017080:-9882 | Msa1360470:intergenic |
| CCTCATTTATGACAGAAAAG+TGG | 0.579655 | tig0017080:-7917 | Msa1360470:intergenic |
| AGAAATGATGCAGTTTGGCA+AGG | 0.581484 | tig0017080:+7689 | Msa1360470:CDS |
| GATGGTAAATCTAAAAGGGA+TGG | 0.583846 | tig0017080:+7599 | Msa1360470:CDS |
| CTTTGGCATTTGTTTCCATG+TGG | 0.588327 | tig0017080:+10641 | Msa1360470:CDS |
| CAGTGGATGTGCATAAATAT+GGG | 0.593412 | tig0017080:+11257 | Msa1360470:CDS |
| CAGTTACTGAGTGGTCCGGT+GGG | 0.595469 | tig0017080:+13826 | Msa1360470:intron |
| TATGCTGAGTGACCAGACTC+AGG | 0.595937 | tig0017080:-10180 | Msa1360470:intergenic |
| AATACAAAAGCAATTATGGA+AGG | 0.596677 | tig0017080:+14108 | Msa1360470:CDS |
| TAGGAACCATGAAATCAGAA+AGG | 0.604860 | tig0017080:+11312 | Msa1360470:CDS |
| CACCAAGGCAAAGGTCCACA+TGG | 0.607122 | tig0017080:-10656 | Msa1360470:intergenic |
| TGTACGCTTTGAGGCAGAAG+TGG | 0.608150 | tig0017080:+9910 | Msa1360470:CDS |
| ATTATCCCATGTGGAAACCC+AGG | 0.609396 | tig0017080:-10478 | Msa1360470:intergenic |
| ATACAAAGCCACCAAGGCAA+AGG | 0.612208 | tig0017080:-10665 | Msa1360470:intergenic |
| TGAAGAAACTTACTTTGATG+GGG | 0.614207 | tig0017080:-10504 | Msa1360470:intergenic |
| ACATCTGGAGGACAAATATG+TGG | 0.618907 | tig0017080:+9971 | Msa1360470:CDS |
| TGGAATACATCCAAATGCAA+GGG | 0.618914 | tig0017080:-9881 | Msa1360470:intergenic |
| CTTCCAATGATAAACAACTC+GGG | 0.619254 | tig0017080:-14242 | Msa1360470:intergenic |
| AAATATGGGTTGGCTCCCAA+AGG | 0.620427 | tig0017080:+11271 | Msa1360470:CDS |
| TCTTCCAATGATAAACAACT+CGG | 0.621122 | tig0017080:-14243 | Msa1360470:intergenic |
| AGTAAAGAAAAGACATCTGG+AGG | 0.621210 | tig0017080:+9959 | Msa1360470:CDS |
| AATGATATCATGTCATCCAA+AGG | 0.624476 | tig0017080:+14320 | Msa1360470:CDS |
| TGTGGCAACATGACATCAGG+AGG | 0.628292 | tig0017080:+9989 | Msa1360470:CDS |
| TTCTCTGTTTATCGCAAACG+CGG | 0.629072 | tig0017080:+6111 | Msa1360470:CDS |
| ATGGGGTCTATTATCCCATG+TGG | 0.632533 | tig0017080:-10487 | Msa1360470:intergenic |
| GGGCGGCAATGATATCTCTA+GGG | 0.640005 | tig0017080:+13907 | Msa1360470:CDS |
| TAAAATCATAAGGTTGAATG+GGG | 0.646928 | tig0017080:-11210 | Msa1360470:intergenic |
| CGTCCTTGAGAAAATGAGAG+AGG | 0.649181 | tig0017080:+7661 | Msa1360470:CDS |
| TTATGTTATATGCAGCATAG+AGG | 0.650106 | tig0017080:+14214 | Msa1360470:intron |
| TCTTTGTGTGTGCATCGAAG+AGG | 0.650299 | tig0017080:+15828 | Msa1360470:three_prime_UTR |
| AAGGCAATACAAAGCCACCA+AGG | 0.658638 | tig0017080:-10671 | Msa1360470:intergenic |
| TGGAGATACATACAACCCAC+CGG | 0.659255 | tig0017080:-13841 | Msa1360470:intergenic |
| GAAGATGCCAGATAGAGGAA+TGG | 0.662743 | tig0017080:+15589 | Msa1360470:CDS |
| GGATGTGCATAAATATGGGT+TGG | 0.663951 | tig0017080:+11261 | Msa1360470:CDS |
| CTATATAACCCTTCACACCA+GGG | 0.682886 | tig0017080:-6376 | Msa1360470:intergenic |
| ATTGGAGGAGATGAGTCTGG+TGG | 0.704181 | tig0017080:+7894 | Msa1360470:CDS |
| AATCCTGGTCCAATAACTGG+AGG | 0.704883 | tig0017080:+15539 | Msa1360470:CDS |
| AAGACCTGATATGACAATCG+TGG | 0.707874 | tig0017080:+14262 | Msa1360470:CDS |
| AGAAGTGGTTGCAATGACAG+CGG | 0.708284 | tig0017080:+9925 | Msa1360470:CDS |
| GTGGCAACATGACATCAGGA+GGG | 0.719581 | tig0017080:+9990 | Msa1360470:CDS |
| AGAGAGAAACGAATTCGCAG+TGG | 0.727426 | tig0017080:-6050 | Msa1360460:intergenic |
| TCTATCTGGCATCTTCCCAG+CGG | 0.735851 | tig0017080:-15582 | Msa1360460:intergenic |
| GCGATAAACAGAGAAAACAG+AGG | 0.746093 | tig0017080:-6103 | Msa1360460:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGAGATTTTTTATTTTTT+TGG | + | tig0017080:6339-6358 | Msa1360470:intron | 10.0% |
| !! | TAATAATTCTAAATTTGAAA+TGG | + | tig0017080:6431-6450 | Msa1360470:intron | 10.0% |
| !! | ATTAATAAATGATAAGTTTA+GGG | + | tig0017080:7139-7158 | Msa1360470:intron | 10.0% |
| !!! | AGTTATGTTATTTATTTTTA+GGG | - | tig0017080:8283-8302 | Msa1360470:intergenic | 10.0% |
| !!! | AGTTATGTTATTTATTTTTA+GGG | - | tig0017080:8283-8302 | Msa1360470:intergenic | 10.0% |
| !! | ATTAATGTTAATAAAATTTC+AGG | + | tig0017080:9843-9862 | Msa1360470:intron | 10.0% |
| !!! | AAAATTAATTTTTCAATTAC+AGG | + | tig0017080:10151-10170 | Msa1360470:intron | 10.0% |
| !! | AATAATGAAAAATAAATCAA+AGG | - | tig0017080:10786-10805 | Msa1360470:intergenic | 10.0% |
| !! | TAAAAAAATAGAAATGAAAA+AGG | - | tig0017080:13486-13505 | Msa1360470:intergenic | 10.0% |
| !!! | TTTTCATTTCTATTTTTTTA+TGG | + | tig0017080:13486-13505 | Msa1360470:intron | 10.0% |
| !!! | TTTGAAATTGAATTTGATTA+TGG | + | tig0017080:6496-6515 | Msa1360470:intron | 15.0% |
| !! | TTGAAATTGAATTTGATTAT+GGG | + | tig0017080:6497-6516 | Msa1360470:intron | 15.0% |
| !!! | GTCATTTTTTAAAGTATTAT+CGG | + | tig0017080:6583-6602 | Msa1360470:intron | 15.0% |
| !! | TTATGAGTATTAAAATGATT+TGG | + | tig0017080:6798-6817 | Msa1360470:intron | 15.0% |
| !! | TTAGTAAAATTGTATTGAAA+AGG | + | tig0017080:7115-7134 | Msa1360470:intron | 15.0% |
| !! | TAGTAAAATTGTATTGAAAA+GGG | + | tig0017080:7116-7135 | Msa1360470:intron | 15.0% |
| !! | GATTAATAAATGATAAGTTT+AGG | + | tig0017080:7138-7157 | Msa1360470:intron | 15.0% |
| !!! | CAGTTATGTTATTTATTTTT+AGG | - | tig0017080:8284-8303 | Msa1360470:intergenic | 15.0% |
| !!! | CAGTTATGTTATTTATTTTT+AGG | - | tig0017080:8284-8303 | Msa1360470:intergenic | 15.0% |
| !! | AGTATTAGAACAATATATAT+TGG | + | tig0017080:9058-9077 | Msa1360470:intron | 15.0% |
| !!! | TAATAAAAACTAGTATCTTT+TGG | - | tig0017080:9515-9534 | Msa1360470:intergenic | 15.0% |
| !!! | TTTGGAATTGTTTTAAAATT+AGG | + | tig0017080:9689-9708 | Msa1360470:intron | 15.0% |
| !! | ATATAATACTGAATTATTAG+TGG | - | tig0017080:10098-10117 | Msa1360470:intergenic | 15.0% |
| !!! | ATGATTTTATGTTTTATACT+CGG | - | tig0017080:11063-11082 | Msa1360470:intergenic | 15.0% |
| !! | TAAACATTAATTATTCAAAC+TGG | - | tig0017080:11173-11192 | Msa1360470:intergenic | 15.0% |
| !!! | ATTTTCTGAATAAAGTTTAA+GGG | + | tig0017080:11747-11766 | Msa1360470:intron | 15.0% |
| !! | TAAGTAAGAAAAAATCATAT+TGG | + | tig0017080:11858-11877 | Msa1360470:intron | 15.0% |
| !! | TATAAAATGCACTAAAATAA+GGG | - | tig0017080:12806-12825 | Msa1360470:intergenic | 15.0% |
| !! | ATATAAAATGCACTAAAATA+AGG | - | tig0017080:12807-12826 | Msa1360470:intergenic | 15.0% |
| !!! | TTTATTTCAGATAAATGTTT+TGG | + | tig0017080:13647-13666 | Msa1360470:intron | 15.0% |
| !! | AAAATAAACAAATTATAACC+AGG | - | tig0017080:14591-14610 | Msa1360470:intergenic | 15.0% |
| !! | TAAGTTATAACAACAAAAAA+AGG | + | tig0017080:14785-14804 | Msa1360470:intron | 15.0% |
| !!! | TACAAAAACACTTTTAAAAT+AGG | + | tig0017080:15207-15226 | Msa1360470:intron | 15.0% |
| !!! | ATCTGTAATTTTATTTTTCA+AGG | + | tig0017080:15676-15695 | Msa1360470:three_prime_UTR | 15.0% |
| !!! | TCTGTAATTTTATTTTTCAA+GGG | + | tig0017080:15677-15696 | Msa1360470:three_prime_UTR | 15.0% |
| !! | AAATCATATATTATTTGGTA+GGG | - | tig0017080:15732-15751 | Msa1360470:intergenic | 15.0% |
| !! | TAAATCATATATTATTTGGT+AGG | - | tig0017080:15733-15752 | Msa1360470:intergenic | 15.0% |
| !! | ATAATGAGAAATATTAGTTG+TGG | + | tig0017080:6265-6284 | Msa1360470:intron | 20.0% |
| !!! | AGTTTTTTGTGTTTTTGAAA+TGG | + | tig0017080:6686-6705 | Msa1360470:intron | 20.0% |
| !!! | TCATGTTTTATGCAATTTTT+TGG | + | tig0017080:6739-6758 | Msa1360470:intron | 20.0% |
| !!! | AAAGATATGTAGTATTGATA+TGG | + | tig0017080:6823-6842 | Msa1360470:intron | 20.0% |
| !!! | AAGATATGTAGTATTGATAT+GGG | + | tig0017080:6824-6843 | Msa1360470:intron | 20.0% |
| !!! | ATCTTATTTTTCGTACTTTT+AGG | + | tig0017080:6927-6946 | Msa1360470:intron | 20.0% |
| !!! | ATTTGTTATTTGTTAATGAC+TGG | + | tig0017080:7463-7482 | Msa1360470:intron | 20.0% |
| !!! | TTTGTTATTTGTTAATGACT+GGG | + | tig0017080:7464-7483 | Msa1360470:intron | 20.0% |
| !!! | TACTAATTTTGCTATTAATC+TGG | + | tig0017080:7540-7559 | Msa1360470:intron | 20.0% |
| !!! | CTGTTTTAATACAAAATTCA+AGG | - | tig0017080:8081-8100 | Msa1360470:intergenic | 20.0% |
| !! | TAAAAAATAGAGAAAGGAAA+GGG | - | tig0017080:8259-8278 | Msa1360470:intergenic | 20.0% |
| !! | ATAAAAAATAGAGAAAGGAA+AGG | - | tig0017080:8260-8279 | Msa1360470:intergenic | 20.0% |
| !!! | TTTTCAAGTTCAAACAATAA+GGG | - | tig0017080:8653-8672 | Msa1360470:intergenic | 20.0% |
| !!! | ATTTTCAAGTTCAAACAATA+AGG | - | tig0017080:8654-8673 | Msa1360470:intergenic | 20.0% |
| !! | AGGTATAATGAAATTATACT+CGG | - | tig0017080:8489-8508 | Msa1360470:intergenic | 20.0% |
| !! | AGAACAATATATATTGGATT+TGG | + | tig0017080:9064-9083 | Msa1360470:intron | 20.0% |
| !! | AATTGTTTATCAAATCTACT+TGG | + | tig0017080:9613-9632 | Msa1360470:intron | 20.0% |
| !! | AGATTATTAAAAACGTAATC+TGG | + | tig0017080:9644-9663 | Msa1360470:intron | 20.0% |
| !!! | AGTATTTTAACATCAAACTA+TGG | + | tig0017080:10217-10236 | Msa1360470:CDS | 20.0% |
| !! | CATTAACAAAAATACCATTA+TGG | + | tig0017080:10293-10312 | Msa1360470:CDS | 20.0% |
| !! | TCATTTAAAAGATTCAAACT+TGG | + | tig0017080:10357-10376 | Msa1360470:intron | 20.0% |
| !! | TAATAAGAATTAAAGTTGTG+AGG | - | tig0017080:10410-10429 | Msa1360470:intergenic | 20.0% |
| !! | TAATATAAAACAAGTTGTTC+CGG | - | tig0017080:10719-10738 | Msa1360470:intergenic | 20.0% |
| !! | AGTTATGAAGTAAAAAGTAA+TGG | - | tig0017080:11515-11534 | Msa1360470:intergenic | 20.0% |
| !!! | CATTTTCTGAATAAAGTTTA+AGG | + | tig0017080:11746-11765 | Msa1360470:intron | 20.0% |
| !! | TATAAATCGTTTATTGTGTT+AGG | + | tig0017080:11827-11846 | Msa1360470:intron | 20.0% |
| !!! | ATGATTTTTTCTTACTTACT+TGG | - | tig0017080:11856-11875 | Msa1360470:intergenic | 20.0% |
| !!! | TATTTTTATTCTTCTAACAG+AGG | - | tig0017080:12377-12396 | Msa1360470:intergenic | 20.0% |
| !! | ACACTTAACAATTTAATTGA+CGG | + | tig0017080:12513-12532 | Msa1360470:intron | 20.0% |
| !! | GATTGTATATTCATCATTAA+GGG | - | tig0017080:12728-12747 | Msa1360470:intergenic | 20.0% |
| !! | TGATTGTATATTCATCATTA+AGG | - | tig0017080:12729-12748 | Msa1360470:intergenic | 20.0% |
| !! | CAATTAAAAATTTACTACCA+TGG | + | tig0017080:12859-12878 | Msa1360470:intron | 20.0% |
| !!! | TTTTATGGTGTATAACATTT+GGG | - | tig0017080:12946-12965 | Msa1360470:intergenic | 20.0% |
| !!! | TTTTTATGGTGTATAACATT+TGG | - | tig0017080:12947-12966 | Msa1360470:intergenic | 20.0% |
| !!! | CTTCTTAAACTGTTTTTTTA+TGG | - | tig0017080:12961-12980 | Msa1360470:intergenic | 20.0% |
| !! | TATGTAGCTTATTAAAATTG+CGG | + | tig0017080:13194-13213 | Msa1360470:intron | 20.0% |
| !!! | TCTTATTTAAGTTTTTCCAT+TGG | + | tig0017080:13288-13307 | Msa1360470:intron | 20.0% |
| !!! | ATCATTTTTTGCAGAAAAAT+AGG | - | tig0017080:13412-13431 | Msa1360470:intergenic | 20.0% |
| !! | AAAATAGAAATGAAAAAGGA+GGG | - | tig0017080:13482-13501 | Msa1360470:intergenic | 20.0% |
| !! | AAAAATAGAAATGAAAAAGG+AGG | - | tig0017080:13483-13502 | Msa1360470:intergenic | 20.0% |
| !!! | TTACTAATGTATTTTCTTTG+TGG | + | tig0017080:13580-13599 | Msa1360470:intron | 20.0% |
| !!! | TTAATTTTACTTATATGGTG+AGG | + | tig0017080:13678-13697 | Msa1360470:intron | 20.0% |
| !!! | TAATTTTACTTATATGGTGA+GGG | + | tig0017080:13679-13698 | Msa1360470:intron | 20.0% |
| !!! | GTTTAGATTTTTGAATGTAA+TGG | + | tig0017080:14191-14210 | Msa1360470:intron | 20.0% |
| !!! | TTAGTAAGTTGGAATTTATT+TGG | + | tig0017080:14623-14642 | Msa1360470:intron | 20.0% |
| !!! | TAGTAAGTTGGAATTTATTT+GGG | + | tig0017080:14624-14643 | Msa1360470:intron | 20.0% |
| !! | AATACAAAATTCCTCTAATT+CGG | + | tig0017080:15055-15074 | Msa1360470:intron | 20.0% |
| !! | ATATAATCATAGATCGAATT+AGG | - | tig0017080:15134-15153 | Msa1360470:intergenic | 20.0% |
| !!! | AAAAGTGTTTTTGTAAAGAA+TGG | - | tig0017080:15202-15221 | Msa1360470:intergenic | 20.0% |
| !! | AGATACAAATCAAATTAAGA+TGG | - | tig0017080:15441-15460 | Msa1360470:intergenic | 20.0% |
| !!! | ATCTTCTACTTAACTATTTT+TGG | + | tig0017080:15457-15476 | Msa1360470:intron | 20.0% |
| !! | GAAAAATAAAATTACAGATG+TGG | - | tig0017080:15675-15694 | Msa1360470:intergenic | 20.0% |
| !!! | CTGTAATTTTATTTTTCAAG+GGG | + | tig0017080:15678-15697 | Msa1360470:three_prime_UTR | 20.0% |
| !! | AATCATATATTATTTGGTAG+GGG | - | tig0017080:15731-15750 | Msa1360470:intergenic | 20.0% |
| !! | CGTCTAAATCATATATTATT+TGG | - | tig0017080:15737-15756 | Msa1360470:intergenic | 20.0% |
| !!! | ATAAAAGCCACTTTTTTAAT+TGG | - | tig0017080:15890-15909 | Msa1360470:intergenic | 20.0% |
| ! | AAATGAAAAGATAACGTTGA+TGG | - | tig0017080:5958-5977 | Msa1209510:intergenic | 25.0% |
| !! | TTTGGAGTTATTCATGATAA+AGG | + | tig0017080:6145-6164 | Msa1360470:CDS | 25.0% |
| !! | TGATAGTGACATGTTATTAA+TGG | + | tig0017080:6867-6886 | Msa1360470:intron | 25.0% |
| ! | AATAAGATGAAATGTCTGAA+AGG | - | tig0017080:6915-6934 | Msa1360470:intergenic | 25.0% |
| !!! | ACTTGCACTTTTAAAATTGA+TGG | + | tig0017080:6986-7005 | Msa1360470:intron | 25.0% |
| ! | GAGTGAGAAAATTTATTAGT+AGG | + | tig0017080:7087-7106 | Msa1360470:intron | 25.0% |
| ! | AAGTATTCATATACCACTTA+AGG | - | tig0017080:7408-7427 | Msa1360470:intergenic | 25.0% |
| !!! | AACATTTTGCTGTTTTCTTT+AGG | + | tig0017080:7499-7518 | Msa1360470:intron | 25.0% |
| ! | AATCTGATGGTAAATCTAAA+AGG | + | tig0017080:7594-7613 | Msa1360470:CDS | 25.0% |
| ! | ATCTGATGGTAAATCTAAAA+GGG | + | tig0017080:7595-7614 | Msa1360470:CDS | 25.0% |
| ! | AAATTCTGATCATATGTGTT+TGG | + | tig0017080:7762-7781 | Msa1360470:intron | 25.0% |
| ! | AATTCTGATCATATGTGTTT+GGG | + | tig0017080:7763-7782 | Msa1360470:intron | 25.0% |
| ! | AAATTGGGCAATTTCTAATT+TGG | - | tig0017080:7819-7838 | Msa1360470:intergenic | 25.0% |
| !! | TTTATTTCTTGCAGTTACAT+TGG | + | tig0017080:7876-7895 | Msa1360470:intron | 25.0% |
| ! | CAGTTTCTATAAATGTTCAT+CGG | - | tig0017080:8024-8043 | Msa1360470:intergenic | 25.0% |
| ! | GATAGTTATTGAGTGATAAT+GGG | - | tig0017080:8222-8241 | Msa1360470:intergenic | 25.0% |
| ! | TGATAGTTATTGAGTGATAA+TGG | - | tig0017080:8223-8242 | Msa1360470:intergenic | 25.0% |
| ! | AAAAAATAGAGAAAGGAAAG+GGG | - | tig0017080:8258-8277 | Msa1360470:intergenic | 25.0% |
| ! | TAGGGATAAAAAATAGAGAA+AGG | - | tig0017080:8265-8284 | Msa1360470:intergenic | 25.0% |
| !! | TGAATTATTGTTAGTTTCAG+TGG | + | tig0017080:8455-8474 | Msa1360470:intron | 25.0% |
| ! | TAATGATAGTACTTAACAGT+GGG | - | tig0017080:8560-8579 | Msa1360470:intergenic | 25.0% |
| !! | AATTTTCCTTAAGACTAATC+TGG | + | tig0017080:8588-8607 | Msa1360470:intron | 25.0% |
| !!! | TTTCAAGTTCAAACAATAAG+GGG | - | tig0017080:8652-8671 | Msa1360470:intergenic | 25.0% |
| ! | TAATAATAGTACTTAGCAGT+GGG | - | tig0017080:8867-8886 | Msa1360470:intergenic | 25.0% |
| ! | TTAATAATAGTACTTAGCAG+TGG | - | tig0017080:8868-8887 | Msa1360470:intergenic | 25.0% |
| !! | TAAATTATGCATTTTGCCTT+AGG | + | tig0017080:8885-8904 | Msa1360470:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | tig0017080:9114-9133 | Msa1360470:intergenic | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | tig0017080:9118-9137 | Msa1360470:intergenic | 25.0% |
| ! | GGAGAACTAAAAAATTGTAT+TGG | - | tig0017080:9121-9140 | Msa1360470:intergenic | 25.0% |
| ! | AAAAAAAAGGAAGAAAGAAG+TGG | - | tig0017080:9220-9239 | Msa1360470:intergenic | 25.0% |
| !! | ATTTTCCAGTTCAAACAAAA+AGG | - | tig0017080:9345-9364 | Msa1360470:intergenic | 25.0% |
| ! | TAATAGTAAGTCATAACCAA+AGG | - | tig0017080:9380-9399 | Msa1360470:intergenic | 25.0% |
| ! | ATAATGAAAGTAGGACAATA+TGG | - | tig0017080:9547-9566 | Msa1360470:intergenic | 25.0% |
| ! | TAATTTCGTTTATGATGTTG+AGG | + | tig0017080:9721-9740 | Msa1360470:intron | 25.0% |
| ! | TATTCCATATGCTTATTAGA+TGG | + | tig0017080:9787-9806 | Msa1360470:intron | 25.0% |
| ! | GATTATATGAAATCCAAGAA+AGG | + | tig0017080:10049-10068 | Msa1360470:CDS | 25.0% |
| ! | ATTATTAGTGGCATACATTT+CGG | - | tig0017080:10086-10105 | Msa1360470:intergenic | 25.0% |
| ! | AAAAGATTCAAACTTGGTAT+AGG | + | tig0017080:10363-10382 | Msa1360470:intron | 25.0% |
| ! | AAAGATTCAAACTTGGTATA+GGG | + | tig0017080:10364-10383 | Msa1360470:intron | 25.0% |
| ! | AAAAAATTCATGAATTCAGC+TGG | + | tig0017080:10548-10567 | Msa1360470:intron | 25.0% |
| ! | CTACCATAACATAGATAATT+TGG | + | tig0017080:10580-10599 | Msa1360470:intron | 25.0% |
| ! | TTGCCAAATTATCTATGTTA+TGG | - | tig0017080:10586-10605 | Msa1360470:intergenic | 25.0% |
| ! | CAGATAATTGAGAAATAAGT+TGG | - | tig0017080:10899-10918 | Msa1360470:intergenic | 25.0% |
| !! | CAACTTATTTCTCAATTATC+TGG | + | tig0017080:10897-10916 | Msa1360470:intron | 25.0% |
| !!! | TTTCGCATATTATGTTTTGA+TGG | + | tig0017080:11022-11041 | Msa1360470:intron | 25.0% |
| ! | TAAAATCATAAGGTTGAATG+GGG | - | tig0017080:11213-11232 | Msa1360470:intergenic | 25.0% |
| ! | GTAAAATCATAAGGTTGAAT+GGG | - | tig0017080:11214-11233 | Msa1360470:intergenic | 25.0% |
| ! | AGTAAAATCATAAGGTTGAA+TGG | - | tig0017080:11215-11234 | Msa1360470:intergenic | 25.0% |
| !!! | GAACAAGTGTTGTTTTATAT+AGG | + | tig0017080:11293-11312 | Msa1360470:CDS | 25.0% |
| !! | ATGTAGCTAAAATTTTTCAC+TGG | - | tig0017080:11357-11376 | Msa1360470:intergenic | 25.0% |
| ! | GACAGTAAAATAAATATCCT+AGG | + | tig0017080:11600-11619 | Msa1360470:intron | 25.0% |
| !! | TCTGTTTCTTACTCTTATTT+GGG | + | tig0017080:11656-11675 | Msa1360470:intron | 25.0% |
| ! | CAAAGAAATTATCTTGCATT+AGG | + | tig0017080:11697-11716 | Msa1360470:intron | 25.0% |
| ! | AAACGATTTATATTGCGATT+TGG | - | tig0017080:11819-11838 | Msa1360470:intergenic | 25.0% |
| ! | TTGGATGAAAATTTCATTTG+AGG | + | tig0017080:12163-12182 | Msa1360470:intron | 25.0% |
| ! | AGCAATTCTATATCCAAATA+AGG | + | tig0017080:12329-12348 | Msa1360470:intron | 25.0% |
| ! | TGTTAAGTGTAAATGAACTT+AGG | - | tig0017080:12503-12522 | Msa1360470:intergenic | 25.0% |
| ! | TACAATTGAAATTGTGGATA+TGG | + | tig0017080:12588-12607 | Msa1360470:intron | 25.0% |
| !! | CTAAAATAAGGGTGATTTTA+AGG | - | tig0017080:12795-12814 | Msa1360470:intergenic | 25.0% |
| ! | TATGAAACTCTCAATTATAC+TGG | + | tig0017080:12824-12843 | Msa1360470:intron | 25.0% |
| ! | TCAATTATACTGGAATAGAA+AGG | + | tig0017080:12834-12853 | Msa1360470:intron | 25.0% |
| ! | CAATTATACTGGAATAGAAA+GGG | + | tig0017080:12835-12854 | Msa1360470:intron | 25.0% |
| !! | ATGAAATTTCATGTTTTCCA+TGG | - | tig0017080:12879-12898 | Msa1360470:intergenic | 25.0% |
| !! | CAGAAAGTAGTTTAAACTTT+TGG | + | tig0017080:12906-12925 | Msa1360470:intron | 25.0% |
| ! | TTTATGGTGTATAACATTTG+GGG | - | tig0017080:12945-12964 | Msa1360470:intergenic | 25.0% |
| ! | AAAACAGTTTAAGAAGAGTA+TGG | + | tig0017080:12965-12984 | Msa1360470:intron | 25.0% |
| !!! | TCCTTGTTGTATTTTTAATG+TGG | + | tig0017080:12990-13009 | Msa1360470:intron | 25.0% |
| !!! | CCTTGTTGTATTTTTAATGT+GGG | + | tig0017080:12991-13010 | Msa1360470:intron | 25.0% |
| ! | ATGAAGTGATTAAAACTTTG+TGG | + | tig0017080:13069-13088 | Msa1360470:intron | 25.0% |
| ! | AATACAGATAAAAGAGAACT+AGG | - | tig0017080:13452-13471 | Msa1360470:intergenic | 25.0% |
| !! | AATTTTCCAATAACAAAGGA+AGG | - | tig0017080:13532-13551 | Msa1360470:intergenic | 25.0% |
| !! | AGACAATTTTCCAATAACAA+AGG | - | tig0017080:13536-13555 | Msa1360470:intergenic | 25.0% |
| !! | AATTTTACTTATATGGTGAG+GGG | + | tig0017080:13680-13699 | Msa1360470:intron | 25.0% |
| ! | ATTATTTATTTCAAAGGCTG+TGG | - | tig0017080:13996-14015 | Msa1360470:intergenic | 25.0% |
| ! | AAGTAACCTGTATAATGAAT+GGG | - | tig0017080:14084-14103 | Msa1360470:intergenic | 25.0% |
| ! | GGAAAATACAAAAGCAATTA+TGG | + | tig0017080:14104-14123 | Msa1360470:CDS | 25.0% |
| ! | AATACAAAAGCAATTATGGA+AGG | + | tig0017080:14108-14127 | Msa1360470:CDS | 25.0% |
| ! | GATCAAAAAGACTACAAAAA+GGG | + | tig0017080:14130-14149 | Msa1360470:CDS | 25.0% |
| ! | GAATATCACACTTTCTAATT+AGG | + | tig0017080:14387-14406 | Msa1360470:intron | 25.0% |
| ! | CAAAAACATTCTCACAATTA+AGG | - | tig0017080:14711-14730 | Msa1360470:intergenic | 25.0% |
| !! | GTTTTTGTAAAGAATGGTAA+AGG | - | tig0017080:15196-15215 | Msa1360470:intergenic | 25.0% |
| ! | TTGAGACTTTGGTTATAATT+GGG | + | tig0017080:15368-15387 | Msa1360470:intron | 25.0% |
| ! | ATCATATATTATTTGGTAGG+GGG | - | tig0017080:15730-15749 | Msa1360470:intergenic | 25.0% |
| ! | TACCAAGAACAAAAAATGAT+AGG | - | tig0017080:15855-15874 | Msa1360470:intergenic | 25.0% |
| !!! | AAAAAAGTGGCTTTTATTTG+TGG | + | tig0017080:15893-15912 | Msa1360470:three_prime_UTR | 25.0% |
| ! | AGAGCACATAAAATGATAAA+TGG | - | tig0017080:15944-15963 | Msa1360470:intergenic | 25.0% |
| !! | AAAGATAACGTTGATGGATT+AGG | - | tig0017080:5952-5971 | Msa1209510:intergenic | 30.0% |
| TATAGATGCTGAAAAACAGA+AGG | + | tig0017080:6394-6413 | Msa1360470:CDS | 30.0% | |
| !!! | ATTTTTTGGCTACAAGTGTT+TGG | + | tig0017080:6753-6772 | Msa1360470:intron | 30.0% |
| !! | TAGTATTGATATGGGTATTG+TGG | + | tig0017080:6832-6851 | Msa1360470:intron | 30.0% |
| GAAAGGTGATATTGATCAAA+AGG | - | tig0017080:6898-6917 | Msa1360470:intergenic | 30.0% | |
| TGCAATGAATATCAATCACA+TGG | - | tig0017080:6967-6986 | Msa1360470:intergenic | 30.0% | |
| GTTAGTAGAGTTAAGATTGT+GGG | + | tig0017080:7187-7206 | Msa1360470:intron | 30.0% | |
| TTAGTAGAGTTAAGATTGTG+GGG | + | tig0017080:7188-7207 | Msa1360470:intron | 30.0% | |
| TTAAGGAACAATAACAATGC+CGG | - | tig0017080:7222-7241 | Msa1360470:intergenic | 30.0% | |
| ! | CATTGTTATTGTTCCTTAAG+TGG | + | tig0017080:7223-7242 | Msa1360470:intron | 30.0% |
| CTTAACTCAATAAACACAAC+TGG | - | tig0017080:7350-7369 | Msa1360470:intergenic | 30.0% | |
| TGGTATATGAATACTTGAGT+TGG | + | tig0017080:7412-7431 | Msa1360470:intron | 30.0% | |
| !!! | GGAATTGTCACTTTTTAACA+AGG | + | tig0017080:7433-7452 | Msa1360470:intron | 30.0% |
| AGAAAAGAAATGATGCAGTT+TGG | + | tig0017080:7684-7703 | Msa1360470:CDS | 30.0% | |
| ATTCTGATCATATGTGTTTG+GGG | + | tig0017080:7764-7783 | Msa1360470:intron | 30.0% | |
| GTCAGTCATAAGTACAAATT+GGG | - | tig0017080:7834-7853 | Msa1360470:intergenic | 30.0% | |
| AATTCAACTGAAAACTCTAC+AGG | - | tig0017080:7963-7982 | Msa1360470:intergenic | 30.0% | |
| CGATGAACATTTATAGAAAC+TGG | + | tig0017080:8022-8041 | Msa1360470:intron | 30.0% | |
| TTGTATTAAAACAGAACCAG+TGG | + | tig0017080:8087-8106 | Msa1360470:intron | 30.0% | |
| ! | TTTCTTGGAAGGGAATTTTA+TGG | - | tig0017080:8176-8195 | Msa1360470:intergenic | 30.0% |
| AAAAATAGAGAAAGGAAAGG+GGG | - | tig0017080:8257-8276 | Msa1360470:intergenic | 30.0% | |
| CTAATGATAGTACTTAACAG+TGG | - | tig0017080:8561-8580 | Msa1360470:intergenic | 30.0% | |
| AAATGTTCAAAGCAAACCTA+TGG | + | tig0017080:8670-8689 | Msa1360470:intron | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | - | tig0017080:9115-9134 | Msa1360470:intergenic | 30.0% | |
| !!! | TTTTTTAGTTCTCCCAAGTT+AGG | + | tig0017080:9127-9146 | Msa1360470:intron | 30.0% |
| !!! | TTTTTAGTTCTCCCAAGTTA+GGG | + | tig0017080:9128-9147 | Msa1360470:intron | 30.0% |
| AAATGTTCAATGCAAACCTT+TGG | + | tig0017080:9361-9380 | Msa1360470:intron | 30.0% | |
| !! | CATGAGCTTTATTCTATGAT+AGG | - | tig0017080:9573-9592 | Msa1360470:intergenic | 30.0% |
| ! | GTTCTAATGTTTGTGTCTTT+TGG | + | tig0017080:9671-9690 | Msa1360470:intron | 30.0% |
| TTAATGAATTTGACGTCCTA+AGG | + | tig0017080:9763-9782 | Msa1360470:intron | 30.0% | |
| TAAGCATATGGAATAACCTT+AGG | - | tig0017080:9782-9801 | Msa1360470:intergenic | 30.0% | |
| CAAACCATCTAATAAGCATA+TGG | - | tig0017080:9794-9813 | Msa1360470:intergenic | 30.0% | |
| TTATTAGTGGCATACATTTC+GGG | - | tig0017080:10085-10104 | Msa1360470:intergenic | 30.0% | |
| ! | GCTTGAAAATTTTTGTCAAC+TGG | - | tig0017080:10249-10268 | Msa1360470:intergenic | 30.0% |
| TGAGTAACTTCATACCATAA+TGG | - | tig0017080:10310-10329 | Msa1360470:intergenic | 30.0% | |
| !! | CATTTGATAATGCAGTTAGT+TGG | + | tig0017080:10448-10467 | Msa1360470:intron | 30.0% |
| TGAAGAAACTTACTTTGATG+GGG | - | tig0017080:10507-10526 | Msa1360470:intergenic | 30.0% | |
| CTGAAGAAACTTACTTTGAT+GGG | - | tig0017080:10508-10527 | Msa1360470:intergenic | 30.0% | |
| ACTGAAGAAACTTACTTTGA+TGG | - | tig0017080:10509-10528 | Msa1360470:intergenic | 30.0% | |
| AATTTGGCAATTTCTTCTGT+AGG | + | tig0017080:10596-10615 | Msa1360470:intron | 30.0% | |
| AAAACAACACTTGTTCCTTT+GGG | - | tig0017080:11289-11308 | Msa1360470:intergenic | 30.0% | |
| TAAAACAACACTTGTTCCTT+TGG | - | tig0017080:11290-11309 | Msa1360470:intergenic | 30.0% | |
| GAAAAAGCGGATATGAAAAA+AGG | - | tig0017080:11432-11451 | Msa1360470:intergenic | 30.0% | |
| ! | CTTCATAACTTGATGTTTTC+CGG | + | tig0017080:11525-11544 | Msa1360470:intron | 30.0% |
| TGTCAATGTATTCATATTCC+AGG | - | tig0017080:11584-11603 | Msa1360470:intergenic | 30.0% | |
| ! | CTCTGTTTCTTACTCTTATT+TGG | + | tig0017080:11655-11674 | Msa1360470:intron | 30.0% |
| TTGCATTAGGTTATTGTCAA+TGG | + | tig0017080:11710-11729 | Msa1360470:intron | 30.0% | |
| CTGAATAAAGTTTAAGGGAA+AGG | + | tig0017080:11752-11771 | Msa1360470:intron | 30.0% | |
| AGAAGAGGAACTATATAACA+TGG | + | tig0017080:11779-11798 | Msa1360470:intron | 30.0% | |
| TATATAACATGGCAAGTGAA+TGG | + | tig0017080:11790-11809 | Msa1360470:intron | 30.0% | |
| !! | AATAGATTGTTTCTGGCAAA+GGG | - | tig0017080:11994-12013 | Msa1360470:intergenic | 30.0% |
| CAAGAACAATACAATGTTCT+CGG | + | tig0017080:12199-12218 | Msa1360470:intron | 30.0% | |
| TTCCATTTCATCTTTGTCAT+AGG | + | tig0017080:12256-12275 | Msa1360470:intron | 30.0% | |
| ! | GTTTTTGTTCTATAACACAC+AGG | - | tig0017080:12307-12326 | Msa1360470:intergenic | 30.0% |
| AAAGTATGAAACAGCCAATT+AGG | + | tig0017080:12405-12424 | Msa1360470:intron | 30.0% | |
| GTGCATAAGAATAGTCAAAT+AGG | + | tig0017080:12466-12485 | Msa1360470:intron | 30.0% | |
| ACAATTTAATTGACGGAAGT+TGG | + | tig0017080:12520-12539 | Msa1360470:intron | 30.0% | |
| GAATCGTACAATTGAAATTG+TGG | + | tig0017080:12582-12601 | Msa1360470:intron | 30.0% | |
| AATAGTACAAATCCATGTCA+TGG | - | tig0017080:12667-12686 | Msa1360470:intergenic | 30.0% | |
| !! | ATAAGGGTGATTTTAAGGAT+TGG | - | tig0017080:12790-12809 | Msa1360470:intergenic | 30.0% |
| CCCACATTAAAAATACAACA+AGG | - | tig0017080:12994-13013 | Msa1360470:intergenic | 30.0% | |
| AAAAAATTGCTGCAAAGTAG+AGG | - | tig0017080:13022-13041 | Msa1360470:intergenic | 30.0% | |
| TATTAAAATTGCGGTGGAAT+CGG | + | tig0017080:13203-13222 | Msa1360470:intron | 30.0% | |
| ! | AAAATGCGAGATTGGTAATT+TGG | + | tig0017080:13230-13249 | Msa1360470:intron | 30.0% |
| CAATCTAGATTAATACACCA+GGG | - | tig0017080:13354-13373 | Msa1360470:intergenic | 30.0% | |
| ACAATCTAGATTAATACACC+AGG | - | tig0017080:13355-13374 | Msa1360470:intergenic | 30.0% | |
| GAGAACTAGGTTATATCTAT+AGG | - | tig0017080:13439-13458 | Msa1360470:intergenic | 30.0% | |
| GTTATTGGAAAATTGTCTGT+TGG | + | tig0017080:13538-13557 | Msa1360470:intron | 30.0% | |
| ! | ATTTTACTTATATGGTGAGG+GGG | + | tig0017080:13681-13700 | Msa1360470:intron | 30.0% |
| ATGGTATTAATCCCAATAAC+AGG | - | tig0017080:13777-13796 | Msa1360470:intergenic | 30.0% | |
| !! | TTAGCCTTACATGATACATT+GGG | - | tig0017080:14053-14072 | Msa1360470:intergenic | 30.0% |
| !! | ATTAGCCTTACATGATACAT+TGG | - | tig0017080:14054-14073 | Msa1360470:intergenic | 30.0% |
| TATCATGTAAGGCTAATTGA+TGG | + | tig0017080:14057-14076 | Msa1360470:intron | 30.0% | |
| CAAGTAACCTGTATAATGAA+TGG | - | tig0017080:14085-14104 | Msa1360470:intergenic | 30.0% | |
| CATTCATTATACAGGTTACT+TGG | + | tig0017080:14083-14102 | Msa1360470:intron | 30.0% | |
| GGATCAAAAAGACTACAAAA+AGG | + | tig0017080:14129-14148 | Msa1360470:CDS | 30.0% | |
| TTATGTTATATGCAGCATAG+AGG | + | tig0017080:14214-14233 | Msa1360470:intron | 30.0% | |
| TCTTCCAATGATAAACAACT+CGG | - | tig0017080:14246-14265 | Msa1360470:intergenic | 30.0% | |
| AATGATATCATGTCATCCAA+AGG | + | tig0017080:14320-14339 | Msa1360470:CDS | 30.0% | |
| AGTTATTGAGGACTTTCTAA+GGG | + | tig0017080:14518-14537 | Msa1360470:CDS | 30.0% | |
| TGTTCACTTATATAGAATCC+TGG | + | tig0017080:14570-14589 | Msa1360470:intron | 30.0% | |
| ATAGGCAAATGTTAGTAAGT+TGG | + | tig0017080:14612-14631 | Msa1360470:intron | 30.0% | |
| TTGGAATTTATTTGGGAGTT+TGG | + | tig0017080:14631-14650 | Msa1360470:intron | 30.0% | |
| AAACATTCTCACAATTAAGG+TGG | - | tig0017080:14708-14727 | Msa1360470:intergenic | 30.0% | |
| AACTCAAAAACTGTATTGGA+GGG | - | tig0017080:14843-14862 | Msa1360470:intergenic | 30.0% | |
| AAGTAGTCTTTCAACTGATA+TGG | - | tig0017080:14868-14887 | Msa1360470:intergenic | 30.0% | |
| GAGGAACTAAAAAATTGCAT+TGG | + | tig0017080:15077-15096 | Msa1360470:intron | 30.0% | |
| GAACTAAAAAATTGCATTGG+AGG | + | tig0017080:15080-15099 | Msa1360470:intron | 30.0% | |
| AACTACTAGCATTATGACTT+TGG | - | tig0017080:15271-15290 | Msa1360470:intergenic | 30.0% | |
| TCATAATGCTAGTAGTTATC+AGG | + | tig0017080:15274-15293 | Msa1360470:intron | 30.0% | |
| CATAATGCTAGTAGTTATCA+GGG | + | tig0017080:15275-15294 | Msa1360470:intron | 30.0% | |
| TAGTTATCAGGGTTTAATTC+TGG | + | tig0017080:15286-15305 | Msa1360470:intron | 30.0% | |
| CTTGAGACTTTGGTTATAAT+TGG | + | tig0017080:15367-15386 | Msa1360470:intron | 30.0% | |
| !!! | ACTATTTTTGGTGTTTTGTG+TGG | + | tig0017080:15469-15488 | Msa1360470:intron | 30.0% |
| ! | GATTTTCTTTCACCTGAAAT+TGG | - | tig0017080:15523-15542 | Msa1360470:intergenic | 30.0% |
| !!! | GTCCTATCATTTTTTGTTCT+TGG | + | tig0017080:15850-15869 | Msa1360470:three_prime_UTR | 30.0% |
| ! | TTTTGTTCTTGGTATGAACT+CGG | + | tig0017080:15861-15880 | Msa1360470:three_prime_UTR | 30.0% |
| TCGGTATCCAATTAAAAAAG+TGG | + | tig0017080:15880-15899 | Msa1360470:three_prime_UTR | 30.0% | |
| ! | GACTCAAAGCTACTCTTTTA+GGG | + | tig0017080:6167-6186 | Msa1360470:CDS | 35.0% |
| TCATAAGTGTAGGTGCTAAT+AGG | - | tig0017080:6538-6557 | Msa1360470:intergenic | 35.0% | |
| ! | GTTTGGTAACATGTAGTATG+TGG | + | tig0017080:6770-6789 | Msa1360470:intron | 35.0% |
| ! | ATTTTATCCCCATACCAAAC+TGG | - | tig0017080:7055-7074 | Msa1360470:intergenic | 35.0% |
| ! | AAATGATAAGTTTAGGGTCC+TGG | + | tig0017080:7145-7164 | Msa1360470:intron | 35.0% |
| GGTTAGTAGAGTTAAGATTG+TGG | + | tig0017080:7186-7205 | Msa1360470:intron | 35.0% | |
| CACTTAAGGAACAACAACAA+TGG | - | tig0017080:7394-7413 | Msa1360470:intergenic | 35.0% | |
| ! | CATTGTTGTTGTTCCTTAAG+TGG | + | tig0017080:7392-7411 | Msa1360470:intron | 35.0% |
| AATCTGGTCATTGATCATAC+AGG | + | tig0017080:7556-7575 | Msa1360470:intron | 35.0% | |
| GTGGATAAGTTACAATCTGA+TGG | + | tig0017080:7581-7600 | Msa1360470:CDS | 35.0% | |
| GATGGTAAATCTAAAAGGGA+TGG | + | tig0017080:7599-7618 | Msa1360470:CDS | 35.0% | |
| GTAAATCTAAAAGGGATGGT+TGG | + | tig0017080:7603-7622 | Msa1360470:CDS | 35.0% | |
| CGTCAGTCATAAGTACAAAT+TGG | - | tig0017080:7835-7854 | Msa1360470:intergenic | 35.0% | |
| ATTTCTTGCAGTTACATTGG+AGG | + | tig0017080:7879-7898 | Msa1360470:intron | 35.0% | |
| CCTCATTTATGACAGAAAAG+TGG | - | tig0017080:7920-7939 | Msa1360470:intergenic | 35.0% | |
| !! | CCACTTTTCTGTCATAAATG+AGG | + | tig0017080:7917-7936 | Msa1360470:CDS | 35.0% |
| TAGAGACACTAAGAACAGAT+TGG | + | tig0017080:8140-8159 | Msa1360470:intron | 35.0% | |
| !! | GTTATTGAGTGATAATGGGA+GGG | - | tig0017080:8218-8237 | Msa1360470:intergenic | 35.0% |
| !! | AGTTATTGAGTGATAATGGG+AGG | - | tig0017080:8219-8238 | Msa1360470:intergenic | 35.0% |
| TCATTGGAAGTCATAACCAT+AGG | - | tig0017080:8689-8708 | Msa1360470:intergenic | 35.0% | |
| ATGTCAACTCTAATGCTCAT+TGG | - | tig0017080:8705-8724 | Msa1360470:intergenic | 35.0% | |
| AAAAGCAAACAAACATGGGT+AGG | - | tig0017080:8830-8849 | Msa1360470:intergenic | 35.0% | |
| ! | TACCCATGTTTGTTTGCTTT+TGG | + | tig0017080:8829-8848 | Msa1360470:intron | 35.0% |
| CTCCAAAAGCAAACAAACAT+GGG | - | tig0017080:8834-8853 | Msa1360470:intergenic | 35.0% | |
| !!! | ATTTTGCCTTAGGCTTTGTT+TGG | + | tig0017080:8895-8914 | Msa1360470:intron | 35.0% |
| !!! | TTTTGCCTTAGGCTTTGTTT+GGG | + | tig0017080:8896-8915 | Msa1360470:intron | 35.0% |
| ! | CTTTGTTTGGGAGTTTAGAA+GGG | + | tig0017080:8908-8927 | Msa1360470:intron | 35.0% |
| !! | AGTGTTTTTCTAGTGAACGA+TGG | + | tig0017080:8998-9017 | Msa1360470:intron | 35.0% |
| !!! | TTTTAGTTCTCCCAAGTTAG+GGG | + | tig0017080:9129-9148 | Msa1360470:intron | 35.0% |
| ATACAAAATCCCCCTAACTT+GGG | - | tig0017080:9142-9161 | Msa1360470:intergenic | 35.0% | |
| AATACAAAATCCCCCTAACT+TGG | - | tig0017080:9143-9162 | Msa1360470:intergenic | 35.0% | |
| GAAGAAAGAAGTGGAAAGAA+TGG | - | tig0017080:9211-9230 | Msa1360470:intergenic | 35.0% | |
| !! | GCTTTCCTTTTTGTTTGAAC+TGG | + | tig0017080:9337-9356 | Msa1360470:intron | 35.0% |
| !!! | GTATCTTTTGGTTTCACTGA+AGG | - | tig0017080:9503-9522 | Msa1360470:intergenic | 35.0% |
| GTAGGACAATATGGAACAAA+AGG | - | tig0017080:9538-9557 | Msa1360470:intergenic | 35.0% | |
| GATAGGTGCATAATGAAAGT+AGG | - | tig0017080:9556-9575 | Msa1360470:intergenic | 35.0% | |
| TGGAATACATCCAAATGCAA+GGG | - | tig0017080:9884-9903 | Msa1360470:intergenic | 35.0% | |
| GGTAGTAAAGAAAAGACATC+TGG | + | tig0017080:9956-9975 | Msa1360470:CDS | 35.0% | |
| AGTAAAGAAAAGACATCTGG+AGG | + | tig0017080:9959-9978 | Msa1360470:CDS | 35.0% | |
| CAATTTCTTCTGTAGGAACT+TGG | + | tig0017080:10603-10622 | Msa1360470:intron | 35.0% | |
| TCATACGAAAATTTGACCTG+TGG | + | tig0017080:10821-10840 | Msa1360470:intron | 35.0% | |
| ATTGACAGATTTATCTCCAC+AGG | - | tig0017080:10840-10859 | Msa1360470:intergenic | 35.0% | |
| AGTTGGAATATGTTGTCAGA+TGG | - | tig0017080:10882-10901 | Msa1360470:intergenic | 35.0% | |
| AACATCTTTCCAAGCATTAG+AGG | + | tig0017080:10924-10943 | Msa1360470:intron | 35.0% | |
| TCAGTGGATGTGCATAAATA+TGG | + | tig0017080:11256-11275 | Msa1360470:CDS | 35.0% | |
| CAGTGGATGTGCATAAATAT+GGG | + | tig0017080:11257-11276 | Msa1360470:CDS | 35.0% | |
| TAGGAACCATGAAATCAGAA+AGG | + | tig0017080:11312-11331 | Msa1360470:CDS | 35.0% | |
| CTCTTACCTTTCTGATTTCA+TGG | - | tig0017080:11321-11340 | Msa1360470:intergenic | 35.0% | |
| ACAGATATATGCTTCATTCC+TGG | + | tig0017080:11563-11582 | Msa1360470:intron | 35.0% | |
| AGGTTATTGTCAATGGAGAT+AGG | + | tig0017080:11717-11736 | Msa1360470:intron | 35.0% | |
| AGCTTAAAGTTCCCATAGAA+AGG | + | tig0017080:11963-11982 | Msa1360470:intron | 35.0% | |
| !! | CAATAGATTGTTTCTGGCAA+AGG | - | tig0017080:11995-12014 | Msa1360470:intergenic | 35.0% |
| AGGAAGCAATAGATTGTTTC+TGG | - | tig0017080:12001-12020 | Msa1360470:intergenic | 35.0% | |
| AGGGAATGATGATCACATTA+GGG | - | tig0017080:12033-12052 | Msa1360470:intergenic | 35.0% | |
| ! | AGAGAAAATGTGTTGCTAGT+GGG | - | tig0017080:12064-12083 | Msa1360470:intergenic | 35.0% |
| TGGAATTAGAAGGTTAGTGT+AGG | - | tig0017080:12113-12132 | Msa1360470:intergenic | 35.0% | |
| ATGTCAACAAAGATTGTGAC+AGG | - | tig0017080:12144-12163 | Msa1360470:intergenic | 35.0% | |
| GTCACAATCTTTGTTGACAT+TGG | + | tig0017080:12144-12163 | Msa1360470:intron | 35.0% | |
| GACAAAGATGAAATGGAAGA+AGG | - | tig0017080:12254-12273 | Msa1360470:intergenic | 35.0% | |
| CTCCTATGACAAAGATGAAA+TGG | - | tig0017080:12261-12280 | Msa1360470:intergenic | 35.0% | |
| TGGATATGGAATTTCACCAA+CGG | + | tig0017080:12602-12621 | Msa1360470:intron | 35.0% | |
| !! | GTTTTGAACTGCAATACATG+TGG | - | tig0017080:12628-12647 | Msa1360470:intergenic | 35.0% |
| ! | TCATGGATATGGATTGCAAA+TGG | - | tig0017080:12650-12669 | Msa1360470:intergenic | 35.0% |
| ACAAATCCATGTCATGGATA+TGG | - | tig0017080:12661-12680 | Msa1360470:intergenic | 35.0% | |
| TATTCATCATTAAGGGTCTC+AGG | - | tig0017080:12721-12740 | Msa1360470:intergenic | 35.0% | |
| ATACAGTCCTTTGTTGCATT+TGG | + | tig0017080:13103-13122 | Msa1360470:intron | 35.0% | |
| AGTCAAACCAAATGCAACAA+AGG | - | tig0017080:13113-13132 | Msa1360470:intergenic | 35.0% | |
| ! | GGTTTGACTTATAGAGTGTT+TGG | + | tig0017080:13124-13143 | Msa1360470:intron | 35.0% |
| GTAGCTTATTAAAATTGCGG+TGG | + | tig0017080:13197-13216 | Msa1360470:intron | 35.0% | |
| TGATCTTATCCCACAACTTT+AGG | - | tig0017080:13317-13336 | Msa1360470:intergenic | 35.0% | |
| ! | TCTAGATTGTTTTCTCCTGT+AGG | + | tig0017080:13365-13384 | Msa1360470:intron | 35.0% |
| TAAATAGAAATAGCGCCTAC+AGG | - | tig0017080:13383-13402 | Msa1360470:intergenic | 35.0% | |
| TAGAAATGAAAAAGGAGGGA+AGG | - | tig0017080:13478-13497 | Msa1360470:intergenic | 35.0% | |
| ! | TGTATTTTCTTTGTGGCTTC+TGG | + | tig0017080:13587-13606 | Msa1360470:intron | 35.0% |
| ATGAGCAACCACAAAGAAAA+CGG | - | tig0017080:13802-13821 | Msa1360470:intergenic | 35.0% | |
| ! | ATGATATCTCTAGGGAAAGA+AGG | + | tig0017080:13915-13934 | Msa1360470:CDS | 35.0% |
| ATCCGTGTATTGTCTGTTAT+TGG | + | tig0017080:13962-13981 | Msa1360470:intron | 35.0% | |
| TCCGTGTATTGTCTGTTATT+GGG | + | tig0017080:13963-13982 | Msa1360470:intron | 35.0% | |
| TCCCAATAACAGACAATACA+CGG | - | tig0017080:13967-13986 | Msa1360470:intergenic | 35.0% | |
| TGCATAAGAGTTAACAGCAA+GGG | - | tig0017080:14025-14044 | Msa1360470:intergenic | 35.0% | |
| TTGCATAAGAGTTAACAGCA+AGG | - | tig0017080:14026-14045 | Msa1360470:intergenic | 35.0% | |
| ! | CTACAAAAAGGGTACAGATA+CGG | + | tig0017080:14141-14160 | Msa1360470:intron | 35.0% |
| ATTCCCGAGTTGTTTATCAT+TGG | + | tig0017080:14239-14258 | Msa1360470:CDS | 35.0% | |
| CTTCCAATGATAAACAACTC+GGG | - | tig0017080:14245-14264 | Msa1360470:intergenic | 35.0% | |
| ! | GGCTTTTGGATCAAATGTTT+TGG | + | tig0017080:14283-14302 | Msa1360470:CDS | 35.0% |
| ATATCATGTCATCCAAAGGT+TGG | + | tig0017080:14324-14343 | Msa1360470:CDS | 35.0% | |
| AGTAAGCCATAATCCTCAAT+TGG | - | tig0017080:14420-14439 | Msa1360470:intergenic | 35.0% | |
| CTTAGAAAGTCCTCAATAAC+TGG | - | tig0017080:14519-14538 | Msa1360470:intergenic | 35.0% | |
| CAGTTATTGAGGACTTTCTA+AGG | + | tig0017080:14517-14536 | Msa1360470:CDS | 35.0% | |
| ! | GGACTTTCTAAGGGATTTAA+AGG | + | tig0017080:14527-14546 | Msa1360470:CDS | 35.0% |
| ATTTATTTGGGAGTTTGGAG+AGG | + | tig0017080:14636-14655 | Msa1360470:intron | 35.0% | |
| ACTCAAAAACTGTATTGGAG+GGG | - | tig0017080:14842-14861 | Msa1360470:intergenic | 35.0% | |
| GAACTCAAAAACTGTATTGG+AGG | - | tig0017080:14844-14863 | Msa1360470:intergenic | 35.0% | |
| GGAGAACTCAAAAACTGTAT+TGG | - | tig0017080:14847-14866 | Msa1360470:intergenic | 35.0% | |
| TAAACTCTTTGGCAGTGTTT+GGG | + | tig0017080:14925-14944 | Msa1360470:intron | 35.0% | |
| AATGAGAGGGTTTGAAAGAA+AGG | + | tig0017080:14965-14984 | Msa1360470:intron | 35.0% | |
| ACAAAATTCCTCTAATTCGG+AGG | + | tig0017080:15058-15077 | Msa1360470:intron | 35.0% | |
| !!! | TTTTAGTTCCTCCGAATTAG+AGG | - | tig0017080:15069-15088 | Msa1360470:intergenic | 35.0% |
| CTAAAAAATTGCATTGGAGG+AGG | + | tig0017080:15083-15102 | Msa1360470:intron | 35.0% | |
| ACTAGCATTATGACTTTGGA+GGG | - | tig0017080:15267-15286 | Msa1360470:intergenic | 35.0% | |
| TACTAGCATTATGACTTTGG+AGG | - | tig0017080:15268-15287 | Msa1360470:intergenic | 35.0% | |
| !!! | AGACAGAAGGTGTTTTAAGT+GGG | - | tig0017080:15314-15333 | Msa1360470:intergenic | 35.0% |
| CTAAGAGATTAAGAGACAGA+AGG | - | tig0017080:15327-15346 | Msa1360470:intergenic | 35.0% | |
| AAAGTCTCAAGTAGATAGCT+TGG | - | tig0017080:15358-15377 | Msa1360470:intergenic | 35.0% | |
| AAGCTATCTACTTGAGACTT+TGG | + | tig0017080:15357-15376 | Msa1360470:intron | 35.0% | |
| ! | ACAGTTGATGTTAGAGTTCA+GGG | + | tig0017080:15405-15424 | Msa1360470:intron | 35.0% |
| TTCAATCTTTGTGTCTTGTG+TGG | + | tig0017080:15494-15513 | Msa1360470:intron | 35.0% | |
| ! | TTTCAGGTGAAAGAAAATCC+TGG | + | tig0017080:15524-15543 | Msa1360470:intron | 35.0% |
| TAAAATCGACCAACAATTCC+TGG | - | tig0017080:15616-15635 | Msa1360470:intergenic | 35.0% | |
| !! | GGAATTGTTGGTCGATTTTA+TGG | + | tig0017080:15616-15635 | Msa1360470:CDS | 35.0% |
| !! | TTGTTGGTCGATTTTATGGA+TGG | + | tig0017080:15620-15639 | Msa1360470:CDS | 35.0% |
| TCATTGCTTTCTTCGCACAA+TGG | + | tig0017080:5988-6007 | Msa1360470:exon | 40.0% | |
| GCGATAAACAGAGAAAACAG+AGG | - | tig0017080:6106-6125 | Msa1360470:intergenic | 40.0% | |
| TTCTCTGTTTATCGCAAACG+CGG | + | tig0017080:6111-6130 | Msa1360470:CDS | 40.0% | |
| ! | GGACTCAAAGCTACTCTTTT+AGG | + | tig0017080:6166-6185 | Msa1360470:CDS | 40.0% |
| !! | TGGTTTTACAGATTGATCCC+TGG | + | tig0017080:6359-6378 | Msa1360470:intron | 40.0% |
| CTATATAACCCTTCACACCA+GGG | - | tig0017080:6379-6398 | Msa1360470:intergenic | 40.0% | |
| TCTATATAACCCTTCACACC+AGG | - | tig0017080:6380-6399 | Msa1360470:intergenic | 40.0% | |
| ACCTACACTTATGATCGATC+AGG | + | tig0017080:6544-6563 | Msa1360470:intron | 40.0% | |
| ACCTGATCGATCATAAGTGT+AGG | - | tig0017080:6548-6567 | Msa1360470:intergenic | 40.0% | |
| AAGGGTGAAGGTAAAGTTGA+CGG | - | tig0017080:7028-7047 | Msa1360470:intergenic | 40.0% | |
| TCAACTTTACCTTCACCCTT+GGG | + | tig0017080:7028-7047 | Msa1360470:intron | 40.0% | |
| ! | AGATTGTGGGGTTCATTTTC+CGG | + | tig0017080:7200-7219 | Msa1360470:intron | 40.0% |
| AGTGGATAAGTACTAGTACC+AGG | + | tig0017080:7272-7291 | Msa1360470:intron | 40.0% | |
| GTCATTGATCATACAGGTTG+TGG | + | tig0017080:7562-7581 | Msa1360470:intron | 40.0% | |
| ! | CTCTCTCATTTTCTCAAGGA+CGG | - | tig0017080:7663-7682 | Msa1360470:intergenic | 40.0% |
| ! | TCTCCTCTCTCATTTTCTCA+AGG | - | tig0017080:7667-7686 | Msa1360470:intergenic | 40.0% |
| AGAAATGATGCAGTTTGGCA+AGG | + | tig0017080:7689-7708 | Msa1360470:CDS | 40.0% | |
| !! | TGGGGTGCTTTTATTGATTG+TGG | + | tig0017080:7782-7801 | Msa1360470:intron | 40.0% |
| !! | GGGGTGCTTTTATTGATTGT+GGG | + | tig0017080:7783-7802 | Msa1360470:intron | 40.0% |
| !! | GGGTGCTTTTATTGATTGTG+GGG | + | tig0017080:7784-7803 | Msa1360470:intron | 40.0% |
| !! | TGCTTTTATTGATTGTGGGG+TGG | + | tig0017080:7787-7806 | Msa1360470:intron | 40.0% |
| !! | GCTTTTATTGATTGTGGGGT+GGG | + | tig0017080:7788-7807 | Msa1360470:intron | 40.0% |
| !! | CTTTTATTGATTGTGGGGTG+GGG | + | tig0017080:7789-7808 | Msa1360470:intron | 40.0% |
| !! | TTTTATTGATTGTGGGGTGG+GGG | + | tig0017080:7790-7809 | Msa1360470:intron | 40.0% |
| GTGATATTCTGTAGATCCAC+TGG | - | tig0017080:8106-8125 | Msa1360470:intergenic | 40.0% | |
| AGTGTCTCTATGTCAGTTAC+TGG | - | tig0017080:8130-8149 | Msa1360470:intergenic | 40.0% | |
| GAAACTCGGATTTCTTGGAA+GGG | - | tig0017080:8186-8205 | Msa1360470:intergenic | 40.0% | |
| AGAAACTCGGATTTCTTGGA+AGG | - | tig0017080:8187-8206 | Msa1360470:intergenic | 40.0% | |
| TCCAAGAAATCCGAGTTTCT+TGG | + | tig0017080:8187-8206 | Msa1360470:intron | 40.0% | |
| ACCAAGAAACTCGGATTTCT+TGG | - | tig0017080:8191-8210 | Msa1360470:intergenic | 40.0% | |
| ! | CCTTAAGACTAATCTGGCTT+CGG | + | tig0017080:8594-8613 | Msa1360470:intron | 40.0% |
| ATAATATGCCCCAGGCTTAT+AGG | + | tig0017080:8619-8638 | Msa1360470:intron | 40.0% | |
| !! | ATGGGTAGGCACTTTAAAGT+AGG | - | tig0017080:8816-8835 | Msa1360470:intergenic | 40.0% |
| GCTCCAAAAGCAAACAAACA+TGG | - | tig0017080:8835-8854 | Msa1360470:intergenic | 40.0% | |
| !!! | TGTTTGTTTGCTTTTGGAGC+TGG | + | tig0017080:8835-8854 | Msa1360470:intron | 40.0% |
| AAACTCCCAAACAAAGCCTA+AGG | - | tig0017080:8904-8923 | Msa1360470:intergenic | 40.0% | |
| !! | GCTTTGTTTGGGAGTTTAGA+AGG | + | tig0017080:8907-8926 | Msa1360470:intron | 40.0% |
| TTTGGGAGTTTAGAAGGGAA+GGG | + | tig0017080:8913-8932 | Msa1360470:intron | 40.0% | |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | tig0017080:9108-9127 | Msa1360470:intergenic | 40.0% |
| !! | TTTAGTTCTCCCAAGTTAGG+GGG | + | tig0017080:9130-9149 | Msa1360470:intron | 40.0% |
| TGGAAAGAATGGAGAGCTTT+GGG | - | tig0017080:9200-9219 | Msa1360470:intergenic | 40.0% | |
| TTGACGTTAAGGCTCTGTTT+GGG | - | tig0017080:9274-9293 | Msa1360470:intergenic | 40.0% | |
| TTTGACGTTAAGGCTCTGTT+TGG | - | tig0017080:9275-9294 | Msa1360470:intergenic | 40.0% | |
| TACATCCAAATGCAAGGGAT+TGG | - | tig0017080:9879-9898 | Msa1360470:intergenic | 40.0% | |
| CTGGAATACATCCAAATGCA+AGG | - | tig0017080:9885-9904 | Msa1360470:intergenic | 40.0% | |
| ACATCTGGAGGACAAATATG+TGG | + | tig0017080:9971-9990 | Msa1360470:CDS | 40.0% | |
| ATATGTGGCAACATGACATC+AGG | + | tig0017080:9986-10005 | Msa1360470:CDS | 40.0% | |
| ! | GGGTTTGGTAATTCCTTTCT+TGG | - | tig0017080:10065-10084 | Msa1360470:intergenic | 40.0% |
| TACAGGATAATTCCTGAGTC+TGG | + | tig0017080:10168-10187 | Msa1360470:intron | 40.0% | |
| AGTTAGTTGGATCTTCTCCT+GGG | + | tig0017080:10461-10480 | Msa1360470:intron | 40.0% | |
| GGTCAACTAGCATCAAACTT+TGG | + | tig0017080:10624-10643 | Msa1360470:CDS | 40.0% | |
| CTTTGGCATTTGTTTCCATG+TGG | + | tig0017080:10641-10660 | Msa1360470:CDS | 40.0% | |
| GTTGTAGTTCCTCTAATGCT+TGG | - | tig0017080:10936-10955 | Msa1360470:intergenic | 40.0% | |
| ! | CACTATTCCCATTTTGTGTG+GGG | - | tig0017080:11095-11114 | Msa1360470:intergenic | 40.0% |
| ! | CCACTATTCCCATTTTGTGT+GGG | - | tig0017080:11096-11115 | Msa1360470:intergenic | 40.0% |
| ! | AATGTTTACCTTTTCCTCCC+AGG | + | tig0017080:11185-11204 | Msa1360470:intron | 40.0% |
| GGATGTGCATAAATATGGGT+TGG | + | tig0017080:11261-11280 | Msa1360470:CDS | 40.0% | |
| CTGTGAAAAATCACTTGCTC+CGG | - | tig0017080:11547-11566 | Msa1360470:intergenic | 40.0% | |
| TCCTAGGCTACACAAACAAA+TGG | + | tig0017080:11616-11635 | Msa1360470:intron | 40.0% | |
| TCCATTTGTTTGTGTAGCCT+AGG | - | tig0017080:11620-11639 | Msa1360470:intergenic | 40.0% | |
| TAAGGGAAAGGAGATAGAAG+AGG | + | tig0017080:11764-11783 | Msa1360470:intron | 40.0% | |
| CTATGGGAACTTTAAGCTCT+GGG | - | tig0017080:11961-11980 | Msa1360470:intergenic | 40.0% | |
| TCTATGGGAACTTTAAGCTC+TGG | - | tig0017080:11962-11981 | Msa1360470:intergenic | 40.0% | |
| AAAGGGCTGAACCTTTCTAT+GGG | - | tig0017080:11977-11996 | Msa1360470:intergenic | 40.0% | |
| TCACATTAGGGGTAGAACTT+AGG | - | tig0017080:12021-12040 | Msa1360470:intergenic | 40.0% | |
| GGGAATGATGATCACATTAG+GGG | - | tig0017080:12032-12051 | Msa1360470:intergenic | 40.0% | |
| GAGGGAATGATGATCACATT+AGG | - | tig0017080:12034-12053 | Msa1360470:intergenic | 40.0% | |
| !! | TGTGTTGCTAGTGGGTTATT+GGG | - | tig0017080:12056-12075 | Msa1360470:intergenic | 40.0% |
| !! | ATGTGTTGCTAGTGGGTTAT+TGG | - | tig0017080:12057-12076 | Msa1360470:intergenic | 40.0% |
| ! | GAGAGAAAATGTGTTGCTAG+TGG | - | tig0017080:12065-12084 | Msa1360470:intergenic | 40.0% |
| TCAACAAAGATTGTGACAGG+AGG | - | tig0017080:12141-12160 | Msa1360470:intergenic | 40.0% | |
| CTTCATGCAACCACTTTATG+TGG | - | tig0017080:12284-12303 | Msa1360470:intergenic | 40.0% | |
| CACTGTACATGCACCTTATT+TGG | - | tig0017080:12345-12364 | Msa1360470:intergenic | 40.0% | |
| CACTCTCAATGCAACCTAAT+TGG | - | tig0017080:12422-12441 | Msa1360470:intergenic | 40.0% | |
| !! | AATTGACGGAAGTTGGTGAA+AGG | + | tig0017080:12527-12546 | Msa1360470:intron | 40.0% |
| TGCAATCCATATCCATGACA+TGG | + | tig0017080:12652-12671 | Msa1360470:intron | 40.0% | |
| ! | TTATAGAGTGTTTGGTCCAG+CGG | + | tig0017080:13132-13151 | Msa1360470:intron | 40.0% |
| TCGGCATTAAAATGCGAGAT+TGG | + | tig0017080:13222-13241 | Msa1360470:intron | 40.0% | |
| TCTTATCCCACAACTTTAGG+AGG | - | tig0017080:13314-13333 | Msa1360470:intergenic | 40.0% | |
| GTGGGATAAGATCACACTTA+TGG | + | tig0017080:13323-13342 | Msa1360470:intron | 40.0% | |
| AAATGAAAAAGGAGGGAAGG+AGG | - | tig0017080:13475-13494 | Msa1360470:intergenic | 40.0% | |
| TGGATTAACTTCTCTGCATC+CGG | + | tig0017080:13506-13525 | Msa1360470:intron | 40.0% | |
| TTCCAATAACAAAGGAAGGC+CGG | - | tig0017080:13528-13547 | Msa1360470:intergenic | 40.0% | |
| !! | CTACAGCATCAATTTGTTGC+AGG | + | tig0017080:13613-13632 | Msa1360470:intron | 40.0% |
| AATGAAGCATGAGAGTTGAG+AGG | + | tig0017080:13712-13731 | Msa1360470:intron | 40.0% | |
| ACCACTTACTTGCCTGTTAT+TGG | + | tig0017080:13762-13781 | Msa1360470:intron | 40.0% | |
| CCACTTACTTGCCTGTTATT+GGG | + | tig0017080:13763-13782 | Msa1360470:intron | 40.0% | |
| CTCATTTGTCAGTTACTGAG+TGG | + | tig0017080:13817-13836 | Msa1360470:intron | 40.0% | |
| TATGTATCTCCAACCATAGC+TGG | + | tig0017080:13852-13871 | Msa1360470:CDS | 40.0% | |
| TACACTTAGAGGTTACAGAC+AGG | - | tig0017080:13943-13962 | Msa1360470:intergenic | 40.0% | |
| CAATACACGGATACACTTAG+AGG | - | tig0017080:13954-13973 | Msa1360470:intergenic | 40.0% | |
| CAGTCCCAATGTATCATGTA+AGG | + | tig0017080:14046-14065 | Msa1360470:intron | 40.0% | |
| GATGGTCCCATTCATTATAC+AGG | + | tig0017080:14075-14094 | Msa1360470:intron | 40.0% | |
| AAGACCTGATATGACAATCG+TGG | + | tig0017080:14262-14281 | Msa1360470:CDS | 40.0% | |
| AAAGCCACGATTGTCATATC+AGG | - | tig0017080:14269-14288 | Msa1360470:intergenic | 40.0% | |
| ! | GATATGACAATCGTGGCTTT+TGG | + | tig0017080:14269-14288 | Msa1360470:CDS | 40.0% |
| ATTAGGATTCCGACCAATTG+AGG | + | tig0017080:14404-14423 | Msa1360470:intron | 40.0% | |
| TTCCGACCAATTGAGGATTA+TGG | + | tig0017080:14411-14430 | Msa1360470:intron | 40.0% | |
| AGCCATAATCCTCAATTGGT+CGG | - | tig0017080:14416-14435 | Msa1360470:intergenic | 40.0% | |
| ACAGCATGTACCAGTTATTG+AGG | + | tig0017080:14506-14525 | Msa1360470:CDS | 40.0% | |
| CAAACACTGCCAAAGAGTTT+AGG | - | tig0017080:14926-14945 | Msa1360470:intergenic | 40.0% | |
| CTAAACTCTTTGGCAGTGTT+TGG | + | tig0017080:14924-14943 | Msa1360470:intron | 40.0% | |
| CAGTGTTTGGGAGTTTAGAA+GGG | + | tig0017080:14937-14956 | Msa1360470:intron | 40.0% | |
| AGTGTTTGGGAGTTTAGAAG+GGG | + | tig0017080:14938-14957 | Msa1360470:intron | 40.0% | |
| AGAGGGTTTGAAAGAAAGGA+AGG | + | tig0017080:14969-14988 | Msa1360470:intron | 40.0% | |
| TTGAAAGAAAGGAAGGACGA+AGG | + | tig0017080:14976-14995 | Msa1360470:intron | 40.0% | |
| TGAAAGAAAGGAAGGACGAA+GGG | + | tig0017080:14977-14996 | Msa1360470:intron | 40.0% | |
| GGAAAAGAATGGAGAGCTTT+GGG | + | tig0017080:14998-15017 | Msa1360470:intron | 40.0% | |
| ! | ATTGCATTGGAGGAGGATTT+TGG | + | tig0017080:15090-15109 | Msa1360470:intron | 40.0% |
| !!! | GACAGAAGGTGTTTTAAGTG+GGG | - | tig0017080:15313-15332 | Msa1360470:intergenic | 40.0% |
| !!! | GAGACAGAAGGTGTTTTAAG+TGG | - | tig0017080:15315-15334 | Msa1360470:intergenic | 40.0% |
| ! | GACAGTTGATGTTAGAGTTC+AGG | + | tig0017080:15404-15423 | Msa1360470:intron | 40.0% |
| GAAAATCCTGGTCCAATAAC+TGG | + | tig0017080:15536-15555 | Msa1360470:CDS | 40.0% | |
| AGAGAGAAACGAATTCGCAG+TGG | - | tig0017080:6053-6072 | Msa1360470:intergenic | 45.0% | |
| GGAACAAGAAGAAGAGTGAG+AGG | - | tig0017080:6085-6104 | Msa1360470:intergenic | 45.0% | |
| !!! | AACGCGGTTCGTTCGTTTTT+TGG | + | tig0017080:6127-6146 | Msa1360470:CDS | 45.0% |
| AGATTGATCCCTGGTGTGAA+GGG | + | tig0017080:6368-6387 | Msa1360470:intron | 45.0% | |
| AGGGTGAAGGTAAAGTTGAC+GGG | - | tig0017080:7027-7046 | Msa1360470:intergenic | 45.0% | |
| GTCAACTTTACCTTCACCCT+TGG | + | tig0017080:7027-7046 | Msa1360470:intron | 45.0% | |
| ! | TGATAAGTTTAGGGTCCTGG+TGG | + | tig0017080:7148-7167 | Msa1360470:intron | 45.0% |
| ! | TGGTGGTGAAAAAACCAGCT+GGG | + | tig0017080:7165-7184 | Msa1360470:intron | 45.0% |
| CTTAACTCTACTAACCCAGC+TGG | - | tig0017080:7182-7201 | Msa1360470:intergenic | 45.0% | |
| ACGCGTGGATACTTGTAAAG+TGG | + | tig0017080:7254-7273 | Msa1360470:intron | 45.0% | |
| AGGTGTACGACGATACTCAT+TGG | + | tig0017080:7320-7339 | Msa1360470:intron | 45.0% | |
| AAGACAGAGTTGCCAAGCAT+GGG | + | tig0017080:7626-7645 | Msa1360470:CDS | 45.0% | |
| CGTCCTTGAGAAAATGAGAG+AGG | + | tig0017080:7661-7680 | Msa1360470:CDS | 45.0% | |
| ! | TTTATTGATTGTGGGGTGGG+GGG | + | tig0017080:7791-7810 | Msa1360470:intron | 45.0% |
| TACATTGGAGGAGATGAGTC+TGG | + | tig0017080:7891-7910 | Msa1360470:CDS | 45.0% | |
| !! | CAGGGTAAGTACTCTGAAGT+AGG | - | tig0017080:8509-8528 | Msa1360470:intergenic | 45.0% |
| ! | CTACTTCAGAGTACTTACCC+TGG | + | tig0017080:8507-8526 | Msa1360470:intron | 45.0% |
| !!! | TACCCTGGCTTGTTTGCTTT+TGG | + | tig0017080:8522-8541 | Msa1360470:intron | 45.0% |
| CTCCAAAAGCAAACAAGCCA+GGG | - | tig0017080:8527-8546 | Msa1360470:intergenic | 45.0% | |
| !! | CCGAAGCCAGATTAGTCTTA+AGG | - | tig0017080:8597-8616 | Msa1360470:intergenic | 45.0% |
| GAACACTTCCTATAAGCCTG+GGG | - | tig0017080:8630-8649 | Msa1360470:intergenic | 45.0% | |
| GGAACACTTCCTATAAGCCT+GGG | - | tig0017080:8631-8650 | Msa1360470:intergenic | 45.0% | |
| GTTTGGGAGTTTAGAAGGGA+AGG | + | tig0017080:8912-8931 | Msa1360470:intron | 45.0% | |
| !!! | TATTGGAGGAGGGTTTTGGA+GGG | - | tig0017080:9104-9123 | Msa1360470:intergenic | 45.0% |
| !! | AAGAATGGAGAGCTTTGGGA+GGG | - | tig0017080:15002-15021 | Msa1360470:intergenic | 45.0% |
| !! | AAAGAATGGAGAGCTTTGGG+AGG | - | tig0017080:15001-15020 | Msa1360470:intergenic | 45.0% |
| GTGGAAAGAATGGAGAGCTT+TGG | - | tig0017080:9201-9220 | Msa1360470:intergenic | 45.0% | |
| GGGGAGGGTTTGGAAAAAAA+AGG | - | tig0017080:9233-9252 | Msa1360470:intergenic | 45.0% | |
| TAAGGCTCTGTTTGGGAGTT+TGG | - | tig0017080:9267-9286 | Msa1360470:intergenic | 45.0% | |
| ACAGAGCCTTAACGTCAAAC+TGG | + | tig0017080:9276-9295 | Msa1360470:intron | 45.0% | |
| CAGAAGCCAGTTTGACGTTA+AGG | - | tig0017080:9285-9304 | Msa1360470:intergenic | 45.0% | |
| ! | AACTGGCTTCTGACATAGTC+TGG | + | tig0017080:9293-9312 | Msa1360470:intron | 45.0% |
| ! | ACTGGCTTCTGACATAGTCT+GGG | + | tig0017080:9294-9313 | Msa1360470:intron | 45.0% |
| TGACATAGTCTGGGCGTTAT+AGG | + | tig0017080:9303-9322 | Msa1360470:intron | 45.0% | |
| GTTGCTATCGAGATCGTGTT+CGG | + | tig0017080:9419-9438 | Msa1360470:intron | 45.0% | |
| ACACACCAATCCCTTGCATT+TGG | + | tig0017080:9871-9890 | Msa1360470:CDS | 45.0% | |
| AGAAGTGGTTGCAATGACAG+CGG | + | tig0017080:9925-9944 | Msa1360470:CDS | 45.0% | |
| !! | AGTGGCATACATTTCGGGTT+TGG | - | tig0017080:10080-10099 | Msa1360470:intergenic | 45.0% |
| CAGTTAGTTGGATCTTCTCC+TGG | + | tig0017080:10460-10479 | Msa1360470:intron | 45.0% | |
| ATTATCCCATGTGGAAACCC+AGG | - | tig0017080:10481-10500 | Msa1360470:intergenic | 45.0% | |
| ATGGGGTCTATTATCCCATG+TGG | - | tig0017080:10490-10509 | Msa1360470:intergenic | 45.0% | |
| ATACAAAGCCACCAAGGCAA+AGG | - | tig0017080:10668-10687 | Msa1360470:intergenic | 45.0% | |
| AAGGCAATACAAAGCCACCA+AGG | - | tig0017080:10674-10693 | Msa1360470:intergenic | 45.0% | |
| CCCACACAAAATGGGAATAG+TGG | + | tig0017080:11093-11112 | Msa1360470:intron | 45.0% | |
| ! | GCCACTATTCCCATTTTGTG+TGG | - | tig0017080:11097-11116 | Msa1360470:intergenic | 45.0% |
| ! | TAAGGTTGAATGGGGTACCT+GGG | - | tig0017080:11205-11224 | Msa1360470:intergenic | 45.0% |
| ! | ATAAGGTTGAATGGGGTACC+TGG | - | tig0017080:11206-11225 | Msa1360470:intergenic | 45.0% |
| !! | AAATATGGGTTGGCTCCCAA+AGG | + | tig0017080:11271-11290 | Msa1360470:CDS | 45.0% |
| !!! | TCCGCTTTTTCCCTTCCTTT+CGG | + | tig0017080:11441-11460 | Msa1360470:intron | 45.0% |
| ACCGAAAGGAAGGGAAAAAG+CGG | - | tig0017080:11445-11464 | Msa1360470:intergenic | 45.0% | |
| CAAAGGGCTGAACCTTTCTA+TGG | - | tig0017080:11978-11997 | Msa1360470:intergenic | 45.0% | |
| !! | TTGCTAGTGGGTTATTGGGA+GGG | - | tig0017080:12052-12071 | Msa1360470:intergenic | 45.0% |
| TTAGTGTAGGAGAGATGGCA+AGG | - | tig0017080:12100-12119 | Msa1360470:intergenic | 45.0% | |
| GAAGGTTAGTGTAGGAGAGA+TGG | - | tig0017080:12105-12124 | Msa1360470:intergenic | 45.0% | |
| GTCATAGGAGCCACATAAAG+TGG | + | tig0017080:12271-12290 | Msa1360470:intron | 45.0% | |
| TGTGCTTCACACTAAACGCA+CGG | - | tig0017080:13172-13191 | Msa1360470:intergenic | 45.0% | |
| ATTCTAGCCTAACAGCATGC+TGG | - | tig0017080:13264-13283 | Msa1360470:intergenic | 45.0% | |
| AGCATGCTGTTAGGCTAGAA+TGG | + | tig0017080:13263-13282 | Msa1360470:intron | 45.0% | |
| ! | CATTGGCCTCCTAAAGTTGT+GGG | + | tig0017080:13305-13324 | Msa1360470:intron | 45.0% |
| ! | ATCCGGCCTTCCTTTGTTAT+TGG | + | tig0017080:13523-13542 | Msa1360470:intron | 45.0% |
| CCCAATAACAGGCAAGTAAG+TGG | - | tig0017080:13766-13785 | Msa1360470:intergenic | 45.0% | |
| !! | TACCATCGCCGTTTTCTTTG+TGG | + | tig0017080:13791-13810 | Msa1360470:intron | 45.0% |
| AACCACAAAGAAAACGGCGA+TGG | - | tig0017080:13796-13815 | Msa1360470:intergenic | 45.0% | |
| TTGTCAGTTACTGAGTGGTC+CGG | + | tig0017080:13822-13841 | Msa1360470:intron | 45.0% | |
| TGGAGATACATACAACCCAC+CGG | - | tig0017080:13844-13863 | Msa1360470:intergenic | 45.0% | |
| !! | AAGCCTTATTGCTGGTGCAT+GGG | + | tig0017080:13887-13906 | Msa1360470:CDS | 45.0% |
| TGCATTCAGATGCCAACCTT+TGG | - | tig0017080:14339-14358 | Msa1360470:intergenic | 45.0% | |
| GCTGTAGTGTCACACAGATA+TGG | - | tig0017080:14491-14510 | Msa1360470:intergenic | 45.0% | |
| TATTTGGGAGTTTGGAGAGG+AGG | + | tig0017080:14639-14658 | Msa1360470:intron | 45.0% | |
| ATTTGGGAGTTTGGAGAGGA+GGG | + | tig0017080:14640-14659 | Msa1360470:intron | 45.0% | |
| AACTGTATTGGAGGGGTTTC+TGG | - | tig0017080:14835-14854 | Msa1360470:intergenic | 45.0% | |
| ACTGCCAAAGAGTTTAGGAG+GGG | - | tig0017080:14921-14940 | Msa1360470:intergenic | 45.0% | |
| CACTGCCAAAGAGTTTAGGA+GGG | - | tig0017080:14922-14941 | Msa1360470:intergenic | 45.0% | |
| ACACTGCCAAAGAGTTTAGG+AGG | - | tig0017080:14923-14942 | Msa1360470:intergenic | 45.0% | |
| GCAGTGTTTGGGAGTTTAGA+AGG | + | tig0017080:14936-14955 | Msa1360470:intron | 45.0% | |
| TTAGAAGGGGAGAGAATGAG+AGG | + | tig0017080:14951-14970 | Msa1360470:intron | 45.0% | |
| TAGAAGGGGAGAGAATGAGA+GGG | + | tig0017080:14952-14971 | Msa1360470:intron | 45.0% | |
| GAAGGACGAAGGGAAAAGAA+TGG | + | tig0017080:14987-15006 | Msa1360470:intron | 45.0% | |
| GGGAAAAGAATGGAGAGCTT+TGG | + | tig0017080:14997-15016 | Msa1360470:intron | 45.0% | |
| !! | AAAGAATGGAGAGCTTTGGG+AGG | + | tig0017080:15001-15020 | Msa1360470:intron | 45.0% |
| TTTGGGAGGCGATGACTTTA+AGG | + | tig0017080:15015-15034 | Msa1360470:intron | 45.0% | |
| ! | GCATTATGACTTTGGAGGGA+GGG | - | tig0017080:15263-15282 | Msa1360470:intergenic | 45.0% |
| ! | AGCATTATGACTTTGGAGGG+AGG | - | tig0017080:15264-15283 | Msa1360470:intergenic | 45.0% |
| CTTGTGTGGTGTCCAATTTC+AGG | + | tig0017080:15508-15527 | Msa1360470:intron | 45.0% | |
| AATCCTGGTCCAATAACTGG+AGG | + | tig0017080:15539-15558 | Msa1360470:CDS | 45.0% | |
| ! | GGAGGACTAGCACCTATATA+TGG | + | tig0017080:15557-15576 | Msa1360470:CDS | 45.0% |
| GAAGATGCCAGATAGAGGAA+TGG | + | tig0017080:15589-15608 | Msa1360470:CDS | 45.0% | |
| AGGAATGGTCCAGGAATTGT+TGG | + | tig0017080:15604-15623 | Msa1360470:CDS | 45.0% | |
| TCGATGCACACACAAAGAAC+AGG | - | tig0017080:15826-15845 | Msa1360470:intergenic | 45.0% | |
| TCTTTGTGTGTGCATCGAAG+AGG | + | tig0017080:15828-15847 | Msa1360470:three_prime_UTR | 45.0% | |
| !! | AAATAATTTATAAGAAAATA+AGG | - | tig0017080:7859-7878 | Msa1360470:intergenic | 5.0% |
| !!! | ATTTTTTAATTTTACTTATA+TGG | + | tig0017080:13673-13692 | Msa1360470:intron | 5.0% |
| !! | AATAAAATTATTTATTTCAA+AGG | - | tig0017080:14002-14021 | Msa1360470:intergenic | 5.0% |
| !!! | TATAATTTGTTTATTTTTAT+AGG | + | tig0017080:14594-14613 | Msa1360470:intron | 5.0% |
| CAGATTGATCCCTGGTGTGA+AGG | + | tig0017080:6367-6386 | Msa1360470:intron | 50.0% | |
| CCATACCAAACTGGTCCCAA+GGG | - | tig0017080:7046-7065 | Msa1360470:intergenic | 50.0% | |
| CCTTGGGACCAGTTTGGTAT+GGG | + | tig0017080:7044-7063 | Msa1360470:intron | 50.0% | |
| CTTGGGACCAGTTTGGTATG+GGG | + | tig0017080:7045-7064 | Msa1360470:intron | 50.0% | |
| !!! | CAGCTGGTTTTTTCACCACC+AGG | - | tig0017080:7166-7185 | Msa1360470:intergenic | 50.0% |
| ! | CTGGTGGTGAAAAAACCAGC+TGG | + | tig0017080:7164-7183 | Msa1360470:intron | 50.0% |
| ACGTACCCTGTACCTTGTAC+CGG | + | tig0017080:7296-7315 | Msa1360470:intron | 50.0% | |
| ACCTACCGGTACAAGGTACA+GGG | - | tig0017080:7304-7323 | Msa1360470:intergenic | 50.0% | |
| ! | GAGTATCGTCGTACACCTAC+CGG | - | tig0017080:7318-7337 | Msa1360470:intergenic | 50.0% |
| GAAGACAGAGTTGCCAAGCA+TGG | + | tig0017080:7625-7644 | Msa1360470:CDS | 50.0% | |
| AGAGTTGCCAAGCATGGGAT+TGG | + | tig0017080:7631-7650 | Msa1360470:CDS | 50.0% | |
| GAGTTGCCAAGCATGGGATT+GGG | + | tig0017080:7632-7651 | Msa1360470:CDS | 50.0% | |
| AGTTGCCAAGCATGGGATTG+GGG | + | tig0017080:7633-7652 | Msa1360470:CDS | 50.0% | |
| GTTTGGCAAGGCAAATGCTC+TGG | + | tig0017080:7701-7720 | Msa1360470:CDS | 50.0% | |
| ! | TTATTGATTGTGGGGTGGGG+GGG | + | tig0017080:7792-7811 | Msa1360470:intron | 50.0% |
| ATTGGAGGAGATGAGTCTGG+TGG | + | tig0017080:7894-7913 | Msa1360470:CDS | 50.0% | |
| GAGGGAGAGACCAAGAAACT+CGG | - | tig0017080:8200-8219 | Msa1360470:intergenic | 50.0% | |
| AGAGAAAGGAAAGGGGGAAG+TGG | - | tig0017080:8251-8270 | Msa1360470:intergenic | 50.0% | |
| GCTCCAAAAGCAAACAAGCC+AGG | - | tig0017080:8528-8547 | Msa1360470:intergenic | 50.0% | |
| CTTCGGACATAATATGCCCC+AGG | + | tig0017080:8611-8630 | Msa1360470:intron | 50.0% | |
| GGGAACACTTCCTATAAGCC+TGG | - | tig0017080:8632-8651 | Msa1360470:intergenic | 50.0% | |
| GGAGTTTAGAAGGGAAGGGA+GGG | + | tig0017080:8917-8936 | Msa1360470:intron | 50.0% | |
| GAGTTTAGAAGGGAAGGGAG+GGG | + | tig0017080:8918-8937 | Msa1360470:intron | 50.0% | |
| !!! | AGGAGGGTTTTGGAGGGTTT+GGG | - | tig0017080:9098-9117 | Msa1360470:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+AGG | - | tig0017080:9105-9124 | Msa1360470:intergenic | 50.0% |
| !! | TGGGAGGGGAGGGTTTTAAT+GGG | - | tig0017080:9181-9200 | Msa1360470:intergenic | 50.0% |
| !! | TTGGGAGGGGAGGGTTTTAA+TGG | - | tig0017080:9182-9201 | Msa1360470:intergenic | 50.0% |
| !! | AGAATGGAGAGCTTTGGGAG+GGG | - | tig0017080:15003-15022 | Msa1360470:intergenic | 50.0% |
| CTCTGTTTGGGAGTTTGGAG+GGG | - | tig0017080:9262-9281 | Msa1360470:intergenic | 50.0% | |
| GCTCTGTTTGGGAGTTTGGA+GGG | - | tig0017080:9263-9282 | Msa1360470:intergenic | 50.0% | |
| GTCTGGGCGTTATAGGAACT+AGG | + | tig0017080:9310-9329 | Msa1360470:intron | 50.0% | |
| CCTCAAAGCGTACAACACTC+TGG | - | tig0017080:9904-9923 | Msa1360470:intergenic | 50.0% | |
| !! | CCAGAGTGTTGTACGCTTTG+AGG | + | tig0017080:9901-9920 | Msa1360470:CDS | 50.0% |
| !! | TGTACGCTTTGAGGCAGAAG+TGG | + | tig0017080:9910-9929 | Msa1360470:CDS | 50.0% |
| TGTGGCAACATGACATCAGG+AGG | + | tig0017080:9989-10008 | Msa1360470:CDS | 50.0% | |
| GTGGCAACATGACATCAGGA+GGG | + | tig0017080:9990-10009 | Msa1360470:CDS | 50.0% | |
| TATGCTGAGTGACCAGACTC+AGG | - | tig0017080:10183-10202 | Msa1360470:intergenic | 50.0% | |
| TCTTCTCCTGGGTTTCCACA+TGG | + | tig0017080:10472-10491 | Msa1360470:CDS | 50.0% | |
| CTTCTCCTGGGTTTCCACAT+GGG | + | tig0017080:10473-10492 | Msa1360470:CDS | 50.0% | |
| TTCCATGTGGACCTTTGCCT+TGG | + | tig0017080:10654-10673 | Msa1360470:CDS | 50.0% | |
| ! | TTGCCTTTTGCTCGTGAGCT+TGG | + | tig0017080:10687-10706 | Msa1360470:CDS | 50.0% |
| ! | TGCCTTTTGCTCGTGAGCTT+GGG | + | tig0017080:10688-10707 | Msa1360470:CDS | 50.0% |
| TACCCAAGCTCACGAGCAAA+AGG | - | tig0017080:10693-10712 | Msa1360470:intergenic | 50.0% | |
| AATCCCAGCCCCACACAAAA+TGG | + | tig0017080:11084-11103 | Msa1360470:intron | 50.0% | |
| ATCCCAGCCCCACACAAAAT+GGG | + | tig0017080:11085-11104 | Msa1360470:intron | 50.0% | |
| ! | TTCCCATTTTGTGTGGGGCT+GGG | - | tig0017080:11090-11109 | Msa1360470:intergenic | 50.0% |
| ! | ATTCCCATTTTGTGTGGGGC+TGG | - | tig0017080:11091-11110 | Msa1360470:intergenic | 50.0% |
| TGCATCTCGACCGAAAGGAA+GGG | - | tig0017080:11454-11473 | Msa1360470:intergenic | 50.0% | |
| ATGCATCTCGACCGAAAGGA+AGG | - | tig0017080:11455-11474 | Msa1360470:intergenic | 50.0% | |
| ACTGATGCATCTCGACCGAA+AGG | - | tig0017080:11459-11478 | Msa1360470:intergenic | 50.0% | |
| !! | GTTGCTAGTGGGTTATTGGG+AGG | - | tig0017080:12053-12072 | Msa1360470:intergenic | 50.0% |
| TAGGAGAGATGGCAAGGAGT+GGG | - | tig0017080:12094-12113 | Msa1360470:intergenic | 50.0% | |
| GGAGGCAGCATGGAATTAGA+AGG | - | tig0017080:12123-12142 | Msa1360470:intergenic | 50.0% | |
| ACTGCAATACATGTGGCCGT+TGG | - | tig0017080:12621-12640 | Msa1360470:intergenic | 50.0% | |
| ! | CCACAACTTTAGGAGGCCAA+TGG | - | tig0017080:13307-13326 | Msa1360470:intergenic | 50.0% |
| ! | CCATTGGCCTCCTAAAGTTG+TGG | + | tig0017080:13304-13323 | Msa1360470:intron | 50.0% |
| !! | AGACCTGGAAGCCTTATTGC+TGG | + | tig0017080:13879-13898 | Msa1360470:CDS | 50.0% |
| !! | GAAGCCTTATTGCTGGTGCA+TGG | + | tig0017080:13886-13905 | Msa1360470:CDS | 50.0% |
| TGGGCGGCAATGATATCTCT+AGG | + | tig0017080:13906-13925 | Msa1360470:CDS | 50.0% | |
| GGGCGGCAATGATATCTCTA+GGG | + | tig0017080:13907-13926 | Msa1360470:CDS | 50.0% | |
| ATGCATTGCAGAGACCCAAC+AGG | + | tig0017080:14354-14373 | Msa1360470:CDS | 50.0% | |
| ATTGCAGAGACCCAACAGGT+TGG | + | tig0017080:14358-14377 | Msa1360470:intron | 50.0% | |
| ATTCCCCAGTCCAACCTGTT+GGG | - | tig0017080:14371-14390 | Msa1360470:intergenic | 50.0% | |
| TATTCCCCAGTCCAACCTGT+TGG | - | tig0017080:14372-14391 | Msa1360470:intergenic | 50.0% | |
| ! | TGTATTGGAGGGGTTTCTGG+AGG | - | tig0017080:14832-14851 | Msa1360470:intergenic | 50.0% |
| CAAAGAGTTTAGGAGGGGAG+GGG | - | tig0017080:14916-14935 | Msa1360470:intergenic | 50.0% | |
| CCAAAGAGTTTAGGAGGGGA+GGG | - | tig0017080:14917-14936 | Msa1360470:intergenic | 50.0% | |
| ! | GCATTGGAGGAGGATTTTGG+AGG | + | tig0017080:15093-15112 | Msa1360470:intron | 50.0% |
| TTTGGAGGGAGGGAAGTTGA+GGG | - | tig0017080:15253-15272 | Msa1360470:intergenic | 50.0% | |
| AGTCCTCCAGTTATTGGACC+AGG | - | tig0017080:15545-15564 | Msa1360470:intergenic | 50.0% | |
| GGTGCTAGTCCTCCAGTTAT+TGG | - | tig0017080:15551-15570 | Msa1360470:intergenic | 50.0% | |
| !! | CACCTATATATGGTGCCGCT+GGG | + | tig0017080:15567-15586 | Msa1360470:CDS | 50.0% |
| TTCCCAGCGGCACCATATAT+AGG | - | tig0017080:15572-15591 | Msa1360470:intergenic | 50.0% | |
| TCTATCTGGCATCTTCCCAG+CGG | - | tig0017080:15585-15604 | Msa1360470:intergenic | 50.0% | |
| TCCTGGACCATTCCTCTATC+TGG | - | tig0017080:15599-15618 | Msa1360470:intergenic | 50.0% | |
| ! | GGATGGCACATGCTAGTTTG+TGG | + | tig0017080:15637-15656 | Msa1360470:exon | 50.0% |
| CAAACTGGTCCCAAGGGTGA+AGG | - | tig0017080:7040-7059 | Msa1360470:intergenic | 55.0% | |
| CTTCACCCTTGGGACCAGTT+TGG | + | tig0017080:7038-7057 | Msa1360470:intron | 55.0% | |
| CCCTTGGGACCAGTTTGGTA+TGG | + | tig0017080:7043-7062 | Msa1360470:intron | 55.0% | |
| CCCATACCAAACTGGTCCCA+AGG | - | tig0017080:7047-7066 | Msa1360470:intergenic | 55.0% | |
| CGCGTCGAGTCTACCACTTA+AGG | - | tig0017080:7239-7258 | Msa1360470:intergenic | 55.0% | |
| TAAGTGGTAGACTCGACGCG+TGG | + | tig0017080:7239-7258 | Msa1360470:intron | 55.0% | |
| CAAGGTACAGGGTACGTACC+TGG | - | tig0017080:7293-7312 | Msa1360470:intergenic | 55.0% | |
| ! | ACCCTGTACCTTGTACCGGT+AGG | + | tig0017080:7300-7319 | Msa1360470:intron | 55.0% |
| CACCTACCGGTACAAGGTAC+AGG | - | tig0017080:7305-7324 | Msa1360470:intergenic | 55.0% | |
| GTCGTACACCTACCGGTACA+AGG | - | tig0017080:7311-7330 | Msa1360470:intergenic | 55.0% | |
| GATGTCCCCAATCCCATGCT+TGG | - | tig0017080:7641-7660 | Msa1360470:intergenic | 55.0% | |
| GGGAGTTTAGAAGGGAAGGG+AGG | + | tig0017080:8916-8935 | Msa1360470:intron | 55.0% | |
| TTTAGAAGGGAAGGGAGGGG+AGG | + | tig0017080:8921-8940 | Msa1360470:intron | 55.0% | |
| TTAGAAGGGAAGGGAGGGGA+GGG | + | tig0017080:8922-8941 | Msa1360470:intron | 55.0% | |
| !!! | GAGGAGGGTTTTGGAGGGTT+TGG | - | tig0017080:9099-9118 | Msa1360470:intergenic | 55.0% |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | tig0017080:9257-9276 | Msa1360470:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | tig0017080:9258-9277 | Msa1360470:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | tig0017080:9259-9278 | Msa1360470:intergenic | 55.0% | |
| GGCTCTGTTTGGGAGTTTGG+AGG | - | tig0017080:9264-9283 | Msa1360470:intergenic | 55.0% | |
| GCAATGACAGCGGCACTTCT+CGG | + | tig0017080:9935-9954 | Msa1360470:CDS | 55.0% | |
| CACCAAGGCAAAGGTCCACA+TGG | - | tig0017080:10659-10678 | Msa1360470:intergenic | 55.0% | |
| CATGTGGACCTTTGCCTTGG+TGG | + | tig0017080:10657-10676 | Msa1360470:CDS | 55.0% | |
| CTCGTGAGCTTGGGTATAGC+CGG | + | tig0017080:10697-10716 | Msa1360470:intron | 55.0% | |
| ! | ATGGGGTACCTGGGAGGAAA+AGG | - | tig0017080:11196-11215 | Msa1360470:intergenic | 55.0% |
| !! | GATGGCAAGGAGTGGGTTAG+AGG | - | tig0017080:12087-12106 | Msa1360470:intergenic | 55.0% |
| GTAGGAGAGATGGCAAGGAG+TGG | - | tig0017080:12095-12114 | Msa1360470:intergenic | 55.0% | |
| GATTGTGACAGGAGGCAGCA+TGG | - | tig0017080:12133-12152 | Msa1360470:intergenic | 55.0% | |
| ! | TAGAGTGTTTGGTCCAGCGG+TGG | + | tig0017080:13135-13154 | Msa1360470:intron | 55.0% |
| CGCGTAACCAGCATGCTGTT+AGG | + | tig0017080:13254-13273 | Msa1360470:intron | 55.0% | |
| TCACACTTATGGCGTCTCCC+TGG | + | tig0017080:13334-13353 | Msa1360470:intron | 55.0% | |
| TCAGTTACTGAGTGGTCCGG+TGG | + | tig0017080:13825-13844 | Msa1360470:intron | 55.0% | |
| CAGTTACTGAGTGGTCCGGT+GGG | + | tig0017080:13826-13845 | Msa1360470:intron | 55.0% | |
| GGTCTGCTTCCAGCTATGGT+TGG | - | tig0017080:13864-13883 | Msa1360470:intergenic | 55.0% | |
| ACCATAGCTGGAAGCAGACC+TGG | + | tig0017080:13864-13883 | Msa1360470:CDS | 55.0% | |
| TCCAGGTCTGCTTCCAGCTA+TGG | - | tig0017080:13868-13887 | Msa1360470:intergenic | 55.0% | |
| GCACCAGCAATAAGGCTTCC+AGG | - | tig0017080:13885-13904 | Msa1360470:intergenic | 55.0% | |
| CCTTATTGCTGGTGCATGGG+CGG | + | tig0017080:13890-13909 | Msa1360470:CDS | 55.0% | |
| ! | AGAGACCCAACAGGTTGGAC+TGG | + | tig0017080:14363-14382 | Msa1360470:intron | 55.0% |
| ! | GAGACCCAACAGGTTGGACT+GGG | + | tig0017080:14364-14383 | Msa1360470:intron | 55.0% |
| ! | AGACCCAACAGGTTGGACTG+GGG | + | tig0017080:14365-14384 | Msa1360470:intron | 55.0% |
| TGGAGAGGAGGGAAGGACTT+CGG | + | tig0017080:14651-14670 | Msa1360470:intron | 55.0% | |
| AAGGACTTCGGTGGGAGAAG+AGG | + | tig0017080:14663-14682 | Msa1360470:intron | 55.0% | |
| AGGACTTCGGTGGGAGAAGA+GGG | + | tig0017080:14664-14683 | Msa1360470:intron | 55.0% | |
| CCCTCCCCTCCTAAACTCTT+TGG | + | tig0017080:14914-14933 | Msa1360470:intron | 55.0% | |
| GCCAAAGAGTTTAGGAGGGG+AGG | - | tig0017080:14918-14937 | Msa1360470:intergenic | 55.0% | |
| TTGGAGGGAGGGAAGTTGAG+GGG | - | tig0017080:15252-15271 | Msa1360470:intergenic | 55.0% | |
| ! | CTTTGGAGGGAGGGAAGTTG+AGG | - | tig0017080:15254-15273 | Msa1360470:intergenic | 55.0% |
| !! | GCACCTATATATGGTGCCGC+TGG | + | tig0017080:15566-15585 | Msa1360470:CDS | 55.0% |
| GCTGGGAAGATGCCAGATAG+AGG | + | tig0017080:15584-15603 | Msa1360470:CDS | 55.0% | |
| GCCAGATAGAGGAATGGTCC+AGG | + | tig0017080:15595-15614 | Msa1360470:CDS | 55.0% | |
| !! | TGGAGAGCTTTGGGAGGGGA+GGG | - | tig0017080:9191-9210 | Msa1360470:intergenic | 60.0% |
| !! | ATGGAGAGCTTTGGGAGGGG+AGG | - | tig0017080:9192-9211 | Msa1360470:intergenic | 60.0% |
| ! | GGTTGAATGGGGTACCTGGG+AGG | - | tig0017080:11202-11221 | Msa1360470:intergenic | 60.0% |
| CCGCCCATGCACCAGCAATA+AGG | - | tig0017080:13893-13912 | Msa1360470:intergenic | 60.0% | |
| GGGAGTTTGGAGAGGAGGGA+AGG | + | tig0017080:14644-14663 | Msa1360470:intron | 60.0% | |
| AGAGGAGGGAAGGACTTCGG+TGG | + | tig0017080:14654-14673 | Msa1360470:intron | 60.0% | |
| GAGGAGGGAAGGACTTCGGT+GGG | + | tig0017080:14655-14674 | Msa1360470:intron | 60.0% | |
| GGACTTCGGTGGGAGAAGAG+GGG | + | tig0017080:14665-14684 | Msa1360470:intron | 60.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+AGG | + | tig0017080:8931-8950 | Msa1360470:intron | 65.0% |
| !! | AGGGAGGGGAGGGCTTTGGA+GGG | + | tig0017080:8932-8951 | Msa1360470:intron | 65.0% |
| GAGTTTGGAGGGGAGGGGAG+GGG | - | tig0017080:9252-9271 | Msa1360470:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | tig0017080:9253-9272 | Msa1360470:intergenic | 65.0% | |
| GGATGCGTTCACACCACCGC+TGG | - | tig0017080:13151-13170 | Msa1360470:intergenic | 65.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | + | tig0017080:8928-8947 | Msa1360470:intron | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | - | tig0017080:9248-9267 | Msa1360470:intergenic | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | - | tig0017080:9249-9268 | Msa1360470:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | tig0017080:9254-9273 | Msa1360470:intergenic | 70.0% | |
| GGGGAGGGGAGGGGAGGGTT+TGG | - | tig0017080:9243-9262 | Msa1360470:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017080 | gene | 5942 | 15992 | 5942 | ID=Msa1360470;Name=Msa1360470 |
| tig0017080 | mRNA | 5942 | 15992 | 5942 | ID=Msa1360470-mRNA-1;Parent=Msa1360470;Name=Msa1360470-mRNA-1;_AED=0.27;_eAED=0.27;_QI=65|1|1|1|1|1|15|340|541 |
| tig0017080 | exon | 5942 | 6209 | 5942 | ID=Msa1360470-mRNA-1:exon:11961;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 6370 | 6415 | 6370 | ID=Msa1360470-mRNA-1:exon:11962;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 7578 | 7729 | 7578 | ID=Msa1360470-mRNA-1:exon:11963;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 7890 | 7949 | 7890 | ID=Msa1360470-mRNA-1:exon:11964;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 9865 | 10089 | 9865 | ID=Msa1360470-mRNA-1:exon:11965;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 10173 | 10314 | 10173 | ID=Msa1360470-mRNA-1:exon:11966;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 10463 | 10513 | 10463 | ID=Msa1360470-mRNA-1:exon:11967;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 10618 | 10709 | 10618 | ID=Msa1360470-mRNA-1:exon:11968;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 11207 | 11333 | 11207 | ID=Msa1360470-mRNA-1:exon:11969;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 13619 | 13634 | 13619 | ID=Msa1360470-mRNA-1:exon:11970;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 13829 | 13936 | 13829 | ID=Msa1360470-mRNA-1:exon:11971;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 14097 | 14151 | 14097 | ID=Msa1360470-mRNA-1:exon:11972;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 14229 | 14375 | 14229 | ID=Msa1360470-mRNA-1:exon:11973;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 14485 | 14563 | 14485 | ID=Msa1360470-mRNA-1:exon:11974;Parent=Msa1360470-mRNA-1 |
| tig0017080 | exon | 15530 | 15992 | 15530 | ID=Msa1360470-mRNA-1:exon:11975;Parent=Msa1360470-mRNA-1 |
| tig0017080 | five_prime_UTR | 5942 | 6006 | 5942 | ID=Msa1360470-mRNA-1:five_prime_utr;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 6007 | 6209 | 6007 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 6370 | 6415 | 6370 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 7578 | 7729 | 7578 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 7890 | 7949 | 7890 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 9865 | 10089 | 9865 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 10173 | 10314 | 10173 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 10463 | 10513 | 10463 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 10618 | 10709 | 10618 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 11207 | 11333 | 11207 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 13619 | 13634 | 13619 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 13829 | 13936 | 13829 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 14097 | 14151 | 14097 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 14229 | 14375 | 14229 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 14485 | 14563 | 14485 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | CDS | 15530 | 15652 | 15530 | ID=Msa1360470-mRNA-1:cds;Parent=Msa1360470-mRNA-1 |
| tig0017080 | three_prime_UTR | 15653 | 15992 | 15653 | ID=Msa1360470-mRNA-1:three_prime_utr;Parent=Msa1360470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
