Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361760 | XP_003593709.1 | 94.151 | 701 | 12 | 3 | 1 | 672 | 1 | 701 | 0.0 | 1344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361760 | sp|F4JRJ6|DEAH9_ARATH | 73.082 | 691 | 156 | 5 | 4 | 667 | 3 | 690 | 0.0 | 1047 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361760 | G7IK78 | 94.151 | 701 | 12 | 3 | 1 | 672 | 1 | 701 | 0.0 | 1344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1102220 | Msa1361760 | 0.829539 | 4.865256e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361760 | MtrunA17_Chr2g0283271 | 94.151 | 701 | 12 | 3 | 1 | 672 | 1 | 701 | 0.0 | 1344 |
| Msa1361760 | MtrunA17_Chr1g0211961 | 45.636 | 653 | 307 | 6 | 43 | 669 | 527 | 1157 | 0.0 | 588 |
| Msa1361760 | MtrunA17_Chr1g0156271 | 45.482 | 653 | 308 | 6 | 43 | 669 | 562 | 1192 | 0.0 | 583 |
| Msa1361760 | MtrunA17_Chr3g0086391 | 43.836 | 657 | 309 | 10 | 43 | 666 | 404 | 1033 | 0.0 | 555 |
| Msa1361760 | MtrunA17_Chr1g0194381 | 43.647 | 669 | 309 | 11 | 41 | 665 | 47 | 691 | 0.0 | 544 |
| Msa1361760 | MtrunA17_Chr3g0099251 | 41.007 | 695 | 317 | 11 | 41 | 665 | 45 | 716 | 1.11e-176 | 520 |
| Msa1361760 | MtrunA17_Chr7g0259941 | 38.440 | 705 | 331 | 9 | 44 | 666 | 41 | 724 | 4.83e-168 | 498 |
| Msa1361760 | MtrunA17_Chr8g0359501 | 37.589 | 705 | 337 | 8 | 44 | 666 | 41 | 724 | 7.82e-167 | 495 |
| Msa1361760 | MtrunA17_Chr4g0044491 | 43.046 | 604 | 285 | 9 | 99 | 665 | 78 | 659 | 2.02e-164 | 488 |
| Msa1361760 | MtrunA17_Chr3g0100131 | 38.392 | 659 | 352 | 8 | 43 | 669 | 584 | 1220 | 8.83e-161 | 496 |
| Msa1361760 | MtrunA17_Chr2g0329131 | 38.543 | 659 | 351 | 8 | 43 | 669 | 563 | 1199 | 1.35e-160 | 495 |
| Msa1361760 | MtrunA17_Chr8g0377111 | 37.031 | 667 | 346 | 15 | 51 | 670 | 4 | 643 | 5.81e-138 | 420 |
| Msa1361760 | MtrunA17_Chr5g0432591 | 45.232 | 409 | 195 | 3 | 30 | 426 | 188 | 579 | 5.52e-124 | 381 |
| Msa1361760 | MtrunA17_Chr6g0476001 | 46.648 | 358 | 162 | 2 | 43 | 388 | 246 | 586 | 2.08e-106 | 335 |
| Msa1361760 | MtrunA17_Chr1g0208961 | 30.312 | 706 | 385 | 19 | 48 | 656 | 326 | 1021 | 4.29e-88 | 299 |
| Msa1361760 | MtrunA17_Chr3g0123681 | 32.179 | 693 | 373 | 18 | 38 | 671 | 249 | 903 | 2.63e-87 | 299 |
| Msa1361760 | MtrunA17_Chr3g0082091 | 33.023 | 645 | 348 | 16 | 70 | 660 | 6 | 620 | 5.62e-86 | 295 |
| Msa1361760 | MtrunA17_Chr1g0177141 | 30.484 | 702 | 388 | 15 | 48 | 656 | 265 | 959 | 5.72e-84 | 285 |
| Msa1361760 | MtrunA17_Chr1g0164621 | 32.612 | 647 | 350 | 17 | 70 | 660 | 6 | 622 | 2.15e-83 | 287 |
| Msa1361760 | MtrunA17_Chr8g0392581 | 28.329 | 706 | 402 | 17 | 48 | 656 | 270 | 968 | 1.48e-81 | 280 |
| Msa1361760 | MtrunA17_Chr3g0100151 | 40.506 | 237 | 123 | 3 | 323 | 545 | 36 | 268 | 6.91e-55 | 188 |
| Msa1361760 | MtrunA17_Chr8g0354481 | 41.589 | 214 | 108 | 2 | 140 | 353 | 1 | 197 | 3.80e-52 | 178 |
| Msa1361760 | MtrunA17_Chr5g0432601 | 41.063 | 207 | 117 | 3 | 459 | 663 | 1 | 204 | 1.84e-51 | 177 |
| Msa1361760 | MtrunA17_Chr0c12g0493631 | 28.008 | 482 | 261 | 11 | 256 | 656 | 141 | 617 | 1.19e-47 | 179 |
| Msa1361760 | MtrunA17_Chr6g0475991 | 38.912 | 239 | 110 | 6 | 427 | 663 | 4 | 208 | 5.36e-46 | 163 |
| Msa1361760 | MtrunA17_Chr3g0100171 | 36.255 | 251 | 140 | 4 | 335 | 569 | 25 | 271 | 2.73e-44 | 164 |
| Msa1361760 | MtrunA17_Chr4g0010901 | 35.461 | 282 | 127 | 6 | 39 | 279 | 260 | 527 | 1.23e-42 | 166 |
| Msa1361760 | MtrunA17_Chr4g0010901 | 39.899 | 198 | 103 | 4 | 292 | 474 | 684 | 880 | 2.90e-26 | 115 |
| Msa1361760 | MtrunA17_Chr5g0442401 | 30.488 | 410 | 244 | 12 | 266 | 640 | 554 | 957 | 3.40e-42 | 164 |
| Msa1361760 | MtrunA17_Chr5g0442401 | 34.254 | 181 | 95 | 4 | 48 | 204 | 184 | 364 | 3.73e-26 | 114 |
| Msa1361760 | MtrunA17_Chr8g0359451 | 35.081 | 248 | 90 | 3 | 64 | 257 | 27 | 257 | 1.72e-40 | 149 |
| Msa1361760 | MtrunA17_Chr1g0195601 | 28.761 | 452 | 254 | 13 | 50 | 446 | 29 | 467 | 6.34e-40 | 157 |
| Msa1361760 | MtrunA17_Chr8g0355291 | 26.636 | 428 | 278 | 10 | 259 | 656 | 522 | 943 | 3.59e-38 | 152 |
| Msa1361760 | MtrunA17_Chr8g0355291 | 38.953 | 172 | 90 | 3 | 48 | 204 | 246 | 417 | 9.04e-25 | 110 |
| Msa1361760 | MtrunA17_Chr8g0354491 | 39.869 | 153 | 89 | 3 | 436 | 586 | 1 | 152 | 3.59e-32 | 122 |
| Msa1361760 | MtrunA17_Chr4g0077061 | 31.148 | 305 | 153 | 8 | 256 | 529 | 899 | 1177 | 4.59e-31 | 130 |
| Msa1361760 | MtrunA17_Chr4g0077061 | 35.714 | 182 | 91 | 5 | 48 | 204 | 602 | 782 | 3.56e-22 | 102 |
| Msa1361760 | MtrunA17_Chr8g0354471 | 49.057 | 106 | 54 | 0 | 30 | 135 | 89 | 194 | 1.20e-28 | 113 |
| Msa1361760 | MtrunA17_Chr4g0067511 | 39.899 | 198 | 103 | 4 | 292 | 474 | 333 | 529 | 1.44e-26 | 115 |
| Msa1361760 | MtrunA17_Chr4g0067511 | 32.484 | 157 | 68 | 4 | 147 | 279 | 34 | 176 | 1.31e-14 | 77.8 |
| Msa1361760 | MtrunA17_Chr8g0355531 | 33.333 | 141 | 76 | 3 | 370 | 494 | 3 | 141 | 1.06e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361760 | AT4G18465.1 | 73.082 | 691 | 156 | 5 | 4 | 667 | 3 | 690 | 0.0 | 1047 |
| Msa1361760 | AT1G32490.2 | 44.359 | 647 | 310 | 8 | 48 | 666 | 391 | 1015 | 0.0 | 583 |
| Msa1361760 | AT1G32490.1 | 44.359 | 647 | 310 | 8 | 48 | 666 | 401 | 1025 | 0.0 | 583 |
| Msa1361760 | AT2G35340.2 | 43.279 | 677 | 331 | 9 | 18 | 666 | 236 | 887 | 0.0 | 575 |
| Msa1361760 | AT2G35340.1 | 43.279 | 677 | 331 | 9 | 18 | 666 | 374 | 1025 | 0.0 | 575 |
| Msa1361760 | AT3G26560.1 | 44.564 | 653 | 314 | 6 | 43 | 669 | 507 | 1137 | 0.0 | 573 |
| Msa1361760 | AT3G62310.1 | 44.214 | 674 | 307 | 11 | 41 | 669 | 51 | 700 | 0.0 | 555 |
| Msa1361760 | AT2G47250.1 | 43.620 | 674 | 311 | 12 | 41 | 669 | 55 | 704 | 0.0 | 548 |
| Msa1361760 | AT4G16680.2 | 42.482 | 685 | 334 | 12 | 16 | 666 | 97 | 755 | 0.0 | 546 |
| Msa1361760 | AT1G26370.1 | 38.719 | 718 | 338 | 10 | 28 | 664 | 18 | 714 | 8.51e-166 | 493 |
| Msa1361760 | AT5G13010.1 | 37.785 | 659 | 356 | 8 | 43 | 669 | 550 | 1186 | 2.99e-158 | 489 |
| Msa1361760 | AT3G62310.3 | 45.621 | 491 | 211 | 6 | 41 | 493 | 51 | 523 | 5.54e-139 | 418 |
| Msa1361760 | AT3G62310.2 | 45.510 | 490 | 211 | 6 | 41 | 492 | 51 | 522 | 1.11e-137 | 416 |
| Msa1361760 | AT1G27900.1 | 36.173 | 669 | 354 | 15 | 51 | 670 | 4 | 648 | 1.70e-131 | 404 |
| Msa1361760 | AT4G16680.1 | 44.136 | 469 | 211 | 7 | 16 | 455 | 177 | 623 | 2.99e-121 | 376 |
| Msa1361760 | AT1G27900.3 | 37.251 | 553 | 293 | 9 | 51 | 568 | 4 | 537 | 4.34e-120 | 369 |
| Msa1361760 | AT1G27900.2 | 37.251 | 553 | 293 | 9 | 51 | 568 | 4 | 537 | 1.07e-119 | 369 |
| Msa1361760 | AT2G35920.2 | 31.197 | 702 | 383 | 15 | 48 | 656 | 167 | 861 | 1.62e-95 | 315 |
| Msa1361760 | AT2G35920.1 | 31.197 | 702 | 383 | 15 | 48 | 656 | 225 | 919 | 8.88e-95 | 315 |
| Msa1361760 | AT2G35920.3 | 31.197 | 702 | 383 | 15 | 48 | 656 | 257 | 951 | 1.42e-94 | 315 |
| Msa1361760 | AT2G01130.2 | 28.691 | 718 | 404 | 19 | 39 | 656 | 138 | 847 | 7.49e-83 | 283 |
| Msa1361760 | AT2G01130.1 | 28.691 | 718 | 404 | 19 | 39 | 656 | 203 | 912 | 2.42e-82 | 282 |
| Msa1361760 | AT5G10370.1 | 31.994 | 672 | 363 | 19 | 51 | 662 | 306 | 943 | 2.83e-82 | 285 |
| Msa1361760 | AT4G01020.1 | 31.399 | 672 | 367 | 19 | 51 | 662 | 303 | 940 | 4.15e-80 | 278 |
| Msa1361760 | AT1G48650.2 | 29.887 | 706 | 389 | 20 | 48 | 656 | 296 | 992 | 3.99e-76 | 265 |
| Msa1361760 | AT1G48650.1 | 29.844 | 707 | 388 | 20 | 48 | 656 | 296 | 992 | 4.02e-76 | 265 |
| Msa1361760 | AT5G04895.1 | 28.693 | 704 | 401 | 19 | 48 | 656 | 257 | 954 | 4.94e-68 | 242 |
| Msa1361760 | AT5G14900.1 | 43.426 | 251 | 126 | 7 | 424 | 665 | 25 | 268 | 1.96e-61 | 207 |
| Msa1361760 | AT1G58060.1 | 28.862 | 492 | 265 | 13 | 246 | 656 | 894 | 1381 | 1.39e-47 | 181 |
| Msa1361760 | AT1G58060.1 | 34.737 | 190 | 97 | 4 | 41 | 204 | 604 | 792 | 5.24e-24 | 108 |
| Msa1361760 | AT1G58050.1 | 32.861 | 353 | 195 | 9 | 257 | 571 | 872 | 1220 | 1.56e-44 | 172 |
| Msa1361760 | AT1G58050.1 | 34.759 | 187 | 98 | 5 | 41 | 204 | 587 | 772 | 3.95e-22 | 102 |
| Msa1361760 | AT1G33390.2 | 35.880 | 301 | 132 | 8 | 42 | 301 | 232 | 512 | 3.84e-41 | 162 |
| Msa1361760 | AT1G33390.2 | 27.233 | 459 | 250 | 9 | 290 | 668 | 637 | 1091 | 1.91e-34 | 141 |
| Msa1361760 | AT1G33390.1 | 35.880 | 301 | 132 | 8 | 42 | 301 | 232 | 512 | 3.84e-41 | 162 |
| Msa1361760 | AT1G33390.1 | 27.233 | 459 | 250 | 9 | 290 | 668 | 637 | 1091 | 1.91e-34 | 141 |
| Msa1361760 | AT1G06670.2 | 28.726 | 369 | 224 | 8 | 266 | 601 | 576 | 938 | 8.53e-39 | 155 |
| Msa1361760 | AT1G06670.2 | 35.359 | 181 | 100 | 3 | 41 | 204 | 207 | 387 | 3.02e-27 | 119 |
| Msa1361760 | AT1G06670.1 | 28.726 | 369 | 224 | 8 | 266 | 601 | 576 | 938 | 1.20e-38 | 154 |
| Msa1361760 | AT1G06670.1 | 35.359 | 181 | 100 | 3 | 41 | 204 | 207 | 387 | 3.41e-27 | 119 |
| Msa1361760 | AT2G30800.2 | 27.945 | 365 | 228 | 8 | 266 | 599 | 209 | 569 | 1.85e-38 | 153 |
| Msa1361760 | AT2G30800.1 | 27.945 | 365 | 228 | 8 | 266 | 599 | 552 | 912 | 5.85e-38 | 152 |
| Msa1361760 | AT2G30800.1 | 35.393 | 178 | 98 | 3 | 44 | 204 | 180 | 357 | 1.49e-27 | 119 |
| Msa1361760 | AT2G47680.1 | 30.282 | 426 | 244 | 14 | 51 | 439 | 26 | 435 | 1.14e-36 | 148 |
Find 175 sgRNAs with CRISPR-Local
Find 696 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATGCATACAGTCTATT+TGG | 0.136281 | tig0017613:-14295 | Msa1361760:intron |
| CTGTTCAGGCTGTTTCTTCT+AGG | 0.204165 | tig0017613:-22778 | Msa1361760:CDS |
| GATGTTCTTGTATTCCTTAC+TGG | 0.232908 | tig0017613:-18221 | Msa1361760:CDS |
| TCTTCTTCTTCCTCCGGATA+TGG | 0.237865 | tig0017613:-23093 | Msa1361760:CDS |
| AGTTGAGAATGGCGCAATTC+TGG | 0.261132 | tig0017613:-23197 | Msa1361760:exon |
| TGGTTGTGGCTCCAATTTCT+AGG | 0.265548 | tig0017613:-16970 | Msa1361760:CDS |
| GCTTCGGGTTTCTCTGTTCC+TGG | 0.271519 | tig0017613:+23171 | None:intergenic |
| CTTGCTTGGACTATTGAAAA+AGG | 0.289636 | tig0017613:-21806 | Msa1361760:intron |
| CTAGCAGAAGCCCTAGAAAT+TGG | 0.312284 | tig0017613:+16959 | None:intergenic |
| GATCTCTGATATTGAAAATC+TGG | 0.337569 | tig0017613:-16990 | Msa1361760:CDS |
| TCTCTACTCCCTTGGGATCT+TGG | 0.346905 | tig0017613:-15412 | Msa1361760:CDS |
| ACTATCATTGTCGGCGAAAC+CGG | 0.359000 | tig0017613:-22982 | Msa1361760:CDS |
| TCGTCAACTACCTGTGCTTC+GGG | 0.361670 | tig0017613:+23156 | None:intergenic |
| GTCGTCAACTACCTGTGCTT+CGG | 0.365035 | tig0017613:+23155 | None:intergenic |
| GTAAATTACGGATACAGATT+TGG | 0.375487 | tig0017613:-12670 | Msa1361760:three_prime_UTR |
| ACCAAGACGACTCGCTGTTC+AGG | 0.375838 | tig0017613:-22792 | Msa1361760:CDS |
| CCGCAACGCCATTCTCTACT+TGG | 0.380130 | tig0017613:-23022 | Msa1361760:CDS |
| ACCCTTCATCGGTGCTATTC+AGG | 0.380359 | tig0017613:-13228 | Msa1361760:intron |
| AATAGATCCCTCATGGCTAT+TGG | 0.386520 | tig0017613:-12882 | Msa1361760:CDS |
| TGGAAGTTCTCTACTCCCTT+GGG | 0.390548 | tig0017613:-15419 | Msa1361760:CDS |
| TTGGAAGTTCTCTACTCCCT+TGG | 0.391288 | tig0017613:-15420 | Msa1361760:CDS |
| CAAGGACCTGTTAAAAGAAT+AGG | 0.393647 | tig0017613:-12629 | Msa1361760:three_prime_UTR |
| GTGTTGTTACAGTGTTATAA+TGG | 0.393810 | tig0017613:-21866 | Msa1361760:intron |
| ACCTCGACTGATAAGATTGC+AGG | 0.395827 | tig0017613:+19396 | None:intergenic |
| ATTGAGGCTGGTTGGGCTGC+CGG | 0.396172 | tig0017613:-22839 | Msa1361760:CDS |
| ACTAATCGAAAGCACTCTTC+AGG | 0.396484 | tig0017613:-18149 | Msa1361760:intron |
| TTCCTCTTTCCTCTAGGAGT+TGG | 0.396820 | tig0017613:+17757 | None:intergenic |
| AAGCAAGATGTCAGTTGAAA+TGG | 0.399094 | tig0017613:+21822 | None:intergenic |
| ATACAGTCTATTTGGATCTC+AGG | 0.400650 | tig0017613:-14287 | Msa1361760:intron |
| TTCGACCAGGAAAATGTTAC+AGG | 0.403679 | tig0017613:-16910 | Msa1361760:intron |
| CATCTCTCCTGTGTAAATTA+CGG | 0.412103 | tig0017613:-12682 | Msa1361760:three_prime_UTR |
| TGAAGCAATGATCCGAGCTT+TGG | 0.413230 | tig0017613:-15439 | Msa1361760:CDS |
| GTATCTGATTGAGGCTGGTT+GGG | 0.414430 | tig0017613:-22846 | Msa1361760:CDS |
| ATTTCAACTGACATCTTGCT+TGG | 0.417097 | tig0017613:-21820 | Msa1361760:CDS |
| CAAGTGGAATTTCTGCAACT+TGG | 0.419675 | tig0017613:+15355 | None:intergenic |
| GTTAAGAAAGCAGTTATTGC+TGG | 0.420014 | tig0017613:-13466 | Msa1361760:CDS |
| CACGTTTCTTAATGTATACA+AGG | 0.420532 | tig0017613:-13965 | Msa1361760:CDS |
| TTGGCGTTGTTTATCGATGC+TGG | 0.431047 | tig0017613:+23065 | None:intergenic |
| AGATTTGATCTCTGTATCTC+TGG | 0.439451 | tig0017613:+16103 | None:intergenic |
| TCATATCAATGAAGAAGATT+AGG | 0.443820 | tig0017613:+12827 | None:intergenic |
| GCCAAGCTTACTTCACCAAC+TGG | 0.448080 | tig0017613:-15381 | Msa1361760:CDS |
| ATTTGTAACTGCGTAACAAA+AGG | 0.451134 | tig0017613:+12519 | None:intergenic |
| GCCTGAACAGCGAGTCGTCT+TGG | 0.453470 | tig0017613:+22791 | None:intergenic |
| AACAGAGAAACCCGAAGCAC+AGG | 0.453867 | tig0017613:-23166 | Msa1361760:CDS |
| CGGATCATTGCTTCAGGTGA+TGG | 0.454095 | tig0017613:+15447 | None:intergenic |
| TACATCCCATCAGGACTGTA+TGG | 0.461427 | tig0017613:+13286 | None:intergenic |
| CTCTGAACATCCAAGTTGGC+TGG | 0.462620 | tig0017613:+14515 | None:intergenic |
| GGTTGTGGCTCCAATTTCTA+GGG | 0.463394 | tig0017613:-16969 | Msa1361760:CDS |
| TGTTCAGGCTGTTTCTTCTA+GGG | 0.465073 | tig0017613:-22777 | Msa1361760:CDS |
| TTCTAGGGTTGCTCAAGAGA+TGG | 0.466640 | tig0017613:-22762 | Msa1361760:CDS |
| GAATTGAAAATAACCCACTT+TGG | 0.468850 | tig0017613:+12947 | None:intergenic |
| AGACAAAGAGCTGGTAGGGC+TGG | 0.476988 | tig0017613:-16938 | Msa1361760:CDS |
| AGTATCTGATTGAGGCTGGT+TGG | 0.479870 | tig0017613:-22847 | Msa1361760:CDS |
| GGGATGTACAAGACGTTAAG+AGG | 0.481768 | tig0017613:-13271 | Msa1361760:CDS |
| AAAGCTCGGATCATTGCTTC+AGG | 0.483536 | tig0017613:+15441 | None:intergenic |
| TCTTAACCACATGTCTAATG+AGG | 0.484691 | tig0017613:-16131 | Msa1361760:CDS |
| CTCCAACTCCTAGAGGAAAG+AGG | 0.486444 | tig0017613:-17759 | Msa1361760:CDS |
| ACACTCTACAAGGTCCCAAT+TGG | 0.489526 | tig0017613:+23289 | None:intergenic |
| TCTTGTCTCCTGTGTAATCC+AGG | 0.491145 | tig0017613:-16083 | Msa1361760:CDS |
| ACTACTTTCCTCTTTCCTCT+AGG | 0.492137 | tig0017613:+17751 | None:intergenic |
| CAAGAGATGGGAGTTAAACT+TGG | 0.492826 | tig0017613:-22749 | Msa1361760:CDS |
| TACTATTGAAGCAAAATCAA+TGG | 0.493274 | tig0017613:-21633 | Msa1361760:CDS |
| TCTAGGGTTGCTCAAGAGAT+GGG | 0.493990 | tig0017613:-22761 | Msa1361760:CDS |
| GGTTTCGCCGACAATGATAG+TGG | 0.498964 | tig0017613:+22984 | None:intergenic |
| TGGCTGATTTCTTCCGCCCA+AGG | 0.500876 | tig0017613:-21613 | Msa1361760:intron |
| CTCTCTTAATAGGAAACCAC+TGG | 0.504086 | tig0017613:-18245 | Msa1361760:intron |
| TTACCGATGGGGTGCTCCTG+AGG | 0.504557 | tig0017613:-22028 | Msa1361760:CDS |
| TGCTAGACAAAGAGCTGGTA+GGG | 0.508207 | tig0017613:-16942 | Msa1361760:CDS |
| TCCAGTTGGTGAAGTAAGCT+TGG | 0.508830 | tig0017613:+15380 | None:intergenic |
| CATTCCACCACTATCATTGT+CGG | 0.508919 | tig0017613:-22991 | Msa1361760:CDS |
| GCAATAATCAAACGCAACTC+TGG | 0.510658 | tig0017613:+21662 | None:intergenic |
| ACAATTAATTAATAAGACTA+AGG | 0.511391 | tig0017613:+12801 | None:intergenic |
| ATAATAGCGTCCAGCCAACT+TGG | 0.512838 | tig0017613:-14525 | Msa1361760:CDS |
| CGATATCATCTTGACCAGTA+AGG | 0.513614 | tig0017613:+18207 | None:intergenic |
| ATTAATTAATTGTGAGTCTG+AGG | 0.513803 | tig0017613:-12791 | Msa1361760:three_prime_UTR |
| AGGGCTCCCACGTGCTGACC+AGG | 0.515295 | tig0017613:-17901 | Msa1361760:intron |
| ATCTTGCGAAAGTGATATGC+AGG | 0.516796 | tig0017613:-13709 | Msa1361760:intron |
| GCGTTGCGGTATTTGTAGAC+AGG | 0.517253 | tig0017613:+23036 | None:intergenic |
| ATGGCGCAATTCTGGAAGCC+AGG | 0.517729 | tig0017613:-23189 | Msa1361760:CDS |
| AACGTCTTGTACATCCCATC+AGG | 0.518567 | tig0017613:+13277 | None:intergenic |
| CTGCTAGACAAAGAGCTGGT+AGG | 0.518625 | tig0017613:-16943 | Msa1361760:CDS |
| TAAAAGCCATACAGTCCTGA+TGG | 0.520580 | tig0017613:-13292 | Msa1361760:intron |
| TACCTGAATAGCACCGATGA+AGG | 0.520912 | tig0017613:+13226 | None:intergenic |
| CAGCAGCCTGAACATAGTCT+TGG | 0.521541 | tig0017613:+18928 | None:intergenic |
| GATGCTGGCGTAGCCATATC+CGG | 0.522367 | tig0017613:+23080 | None:intergenic |
| GCCTGAACATAGTCTTGGAC+AGG | 0.522736 | tig0017613:+18933 | None:intergenic |
| GAAGGCAAATTACCCGCTCA+TGG | 0.523634 | tig0017613:+18886 | None:intergenic |
| CTTAACCACATGTCTAATGA+GGG | 0.524180 | tig0017613:-16130 | Msa1361760:CDS |
| ACCTGTCCAAGACTATGTTC+AGG | 0.533597 | tig0017613:-18934 | Msa1361760:CDS |
| ATTGTCTATGTTGTTGACAG+TGG | 0.536673 | tig0017613:-17601 | Msa1361760:CDS |
| TTGCAGTATCTGATTGAGGC+TGG | 0.538890 | tig0017613:-22851 | Msa1361760:intron |
| TTTGTAACTGCGTAACAAAA+GGG | 0.539243 | tig0017613:+12520 | None:intergenic |
| TTTCTTTAGAACACTCTACA+AGG | 0.542051 | tig0017613:+23279 | None:intergenic |
| ACTATTGATTTGAAGGGCGG+AGG | 0.544761 | tig0017613:+12488 | None:intergenic |
| TACAGTCTATTTGGATCTCA+GGG | 0.545479 | tig0017613:-14286 | Msa1361760:intron |
| AGATCCCTCATGGCTATTGG+AGG | 0.547377 | tig0017613:-12879 | Msa1361760:CDS |
| GGTTGAGATTCGTCATATGT+AGG | 0.548709 | tig0017613:-12590 | Msa1361760:three_prime_UTR |
| AGAAGAATTGCACAGAGGAT+AGG | 0.551527 | tig0017613:-13744 | Msa1361760:CDS |
| TGCATTGCAGTATCTGATTG+AGG | 0.552532 | tig0017613:-22855 | Msa1361760:intron |
| TACCGATGGGGTGCTCCTGA+GGG | 0.552778 | tig0017613:-22027 | Msa1361760:CDS |
| AAAACAGCGGTTCTACAATC+CGG | 0.553766 | tig0017613:-17572 | Msa1361760:intron |
| CAGGTAGTTGACGACGAAGA+AGG | 0.554742 | tig0017613:-23147 | Msa1361760:CDS |
| TGATATTGAAAATCTGGTTG+TGG | 0.556104 | tig0017613:-16984 | Msa1361760:CDS |
| GAGGCTGGTTGGGCTGCCGG+TGG | 0.563350 | tig0017613:-22836 | Msa1361760:CDS |
| TAATTGTGAGTCTGAGGTGA+AGG | 0.563502 | tig0017613:-12785 | Msa1361760:three_prime_UTR |
| CTCCCTCAGGAGCACCCCAT+CGG | 0.563660 | tig0017613:+22025 | None:intergenic |
| TTGTTACAGTGTTATAATGG+TGG | 0.565300 | tig0017613:-21863 | Msa1361760:intron |
| GAGCAGATTAATCAGTAATG+TGG | 0.570249 | tig0017613:-12725 | Msa1361760:three_prime_UTR |
| GCGGCGAGAACCTGAAAATG+AGG | 0.570614 | tig0017613:-19439 | Msa1361760:CDS |
| GAACCTGAAAATGAGGCGAA+TGG | 0.571890 | tig0017613:-19432 | Msa1361760:CDS |
| AGTTTCAACCAAGTAGAGAA+TGG | 0.573146 | tig0017613:+23014 | None:intergenic |
| ATTGAGATTTGCTGCTGCCG+AGG | 0.574585 | tig0017613:-14231 | Msa1361760:intron |
| ATTCTCTAGTATCAACTGAT+CGG | 0.574959 | tig0017613:-12928 | Msa1361760:CDS |
| TTGCAGAGTAAATCCAAAGT+GGG | 0.575538 | tig0017613:-12960 | Msa1361760:intron |
| ATTTGTAGACAGGTAATCGT+TGG | 0.576280 | tig0017613:+23046 | None:intergenic |
| TCTGCAACTTGGAATCCAGT+TGG | 0.576711 | tig0017613:+15366 | None:intergenic |
| ATAGGTCTACTTACAAGCAA+TGG | 0.577788 | tig0017613:-12611 | Msa1361760:three_prime_UTR |
| GATCATTCATCATCTCCCTC+AGG | 0.579868 | tig0017613:+22012 | None:intergenic |
| TGCTAATGCATGTCGTCTTG+AGG | 0.581633 | tig0017613:-13437 | Msa1361760:intron |
| AAAAGCCATACAGTCCTGAT+GGG | 0.581663 | tig0017613:-13291 | Msa1361760:intron |
| CAAAACCACTCAAATCCCTC+AGG | 0.581786 | tig0017613:-22953 | Msa1361760:intron |
| AGAAACATCACTCACGTTGG+AGG | 0.584237 | tig0017613:-17710 | Msa1361760:intron |
| GAGGTAACGAAAGTTGAGAA+TGG | 0.584611 | tig0017613:-23208 | Msa1361760:exon |
| AGTATATATTCACCCTTCAT+CGG | 0.585718 | tig0017613:-13239 | Msa1361760:CDS |
| ATTGTCGGCGAAACCGGTAG+CGG | 0.585830 | tig0017613:-22976 | Msa1361760:CDS |
| CTCAGGGAGAGGGATACAAA+AGG | 0.587938 | tig0017613:-14270 | Msa1361760:CDS |
| AGTAGAGAACTTCCAAAGCT+CGG | 0.587949 | tig0017613:+15427 | None:intergenic |
| ATCTTCCCTGAGAGCGAGAG+AGG | 0.589015 | tig0017613:-23227 | Msa1361760:intron |
| TTTAAAATTTGTTACCGATG+GGG | 0.589931 | tig0017613:-22039 | Msa1361760:CDS |
| TTTCTAACCTGGTCAGCACG+TGG | 0.590505 | tig0017613:+17894 | None:intergenic |
| CATCATCGTCCAAGATCCCA+AGG | 0.591799 | tig0017613:+15403 | None:intergenic |
| TCTCCTCTGAACATCCAAGT+TGG | 0.594100 | tig0017613:+14511 | None:intergenic |
| TCTATTTGGATCTCAGGGAG+AGG | 0.595728 | tig0017613:-14281 | Msa1361760:CDS |
| CTATTTGGATCTCAGGGAGA+GGG | 0.595788 | tig0017613:-14280 | Msa1361760:CDS |
| TGATGACAATAGATCCCTCA+TGG | 0.595949 | tig0017613:-12889 | Msa1361760:CDS |
| TCAAAATTTGAAGACGAGTG+AGG | 0.596239 | tig0017613:+23256 | None:intergenic |
| AGTACTCTTGATCCATGAGC+GGG | 0.596911 | tig0017613:-18898 | Msa1361760:intron |
| GAGCAAAAGATTTACTTGGA+CGG | 0.597397 | tig0017613:+14464 | None:intergenic |
| GAATTCCCTCATTAGACATG+TGG | 0.597790 | tig0017613:+16125 | None:intergenic |
| GCTTCTGCTAGACAAAGAGC+TGG | 0.603108 | tig0017613:-16947 | Msa1361760:CDS |
| AGGGCTGGACGAGTTCGACC+AGG | 0.603545 | tig0017613:-16923 | Msa1361760:CDS |
| TTTGCAGAGTAAATCCAAAG+TGG | 0.604482 | tig0017613:-12961 | Msa1361760:intron |
| TGGTGGATGAAGCTCATGAA+AGG | 0.604552 | tig0017613:-21846 | Msa1361760:CDS |
| TGCTGTAGCTTGTAGAAGTG+AGG | 0.605035 | tig0017613:+12851 | None:intergenic |
| AACTCATACACACCATGGCA+TGG | 0.607780 | tig0017613:+13887 | None:intergenic |
| ACAAGCAATGAGTCGTCCAC+CGG | 0.610424 | tig0017613:+22820 | None:intergenic |
| ACGTTTCTTAATGTATACAA+GGG | 0.616343 | tig0017613:-13964 | Msa1361760:CDS |
| TTCGTTGAATAAATGAACAG+CGG | 0.620861 | tig0017613:+18181 | None:intergenic |
| GCAGCCTCCAATAGCCATGA+GGG | 0.626820 | tig0017613:+12875 | None:intergenic |
| TTCTAACCTGGTCAGCACGT+GGG | 0.627262 | tig0017613:+17895 | None:intergenic |
| CAGCCAACTTGGATGTTCAG+AGG | 0.629001 | tig0017613:-14514 | Msa1361760:CDS |
| ATTGTGATGATTTACGAGAC+TGG | 0.632482 | tig0017613:+13935 | None:intergenic |
| CCAAGTAGAGAATGGCGTTG+CGG | 0.633612 | tig0017613:+23022 | None:intergenic |
| ACCTGAATAGCACCGATGAA+GGG | 0.634582 | tig0017613:+13227 | None:intergenic |
| ACCTGCAATCTTATCAGTCG+AGG | 0.638844 | tig0017613:-19397 | Msa1361760:intron |
| TCTGTATCCGTAATTTACAC+AGG | 0.642893 | tig0017613:+12675 | None:intergenic |
| TGCAGTTGATAGTAGTCACA+AGG | 0.648939 | tig0017613:-12647 | Msa1361760:three_prime_UTR |
| TTCGCCGACAATGATAGTGG+TGG | 0.649702 | tig0017613:+22987 | None:intergenic |
| AGCAGAAACATCACTCACGT+TGG | 0.650532 | tig0017613:-17713 | Msa1361760:CDS |
| GATTGGACGAAAACCTTGGG+CGG | 0.657330 | tig0017613:+21600 | None:intergenic |
| CGTGGGAGCCCTGAATAGAG+AGG | 0.658763 | tig0017613:+17912 | None:intergenic |
| GGAGATAATTACAATTGCTG+CGG | 0.667691 | tig0017613:-14493 | Msa1361760:CDS |
| ATTACAGACCTGGATTACAC+AGG | 0.669752 | tig0017613:+16075 | None:intergenic |
| TAGAACCTGAGGGATTTGAG+TGG | 0.673826 | tig0017613:+22948 | None:intergenic |
| CAGTACTCTTGATCCATGAG+CGG | 0.675015 | tig0017613:-18899 | Msa1361760:CDS |
| AGCAGCCTCCAATAGCCATG+AGG | 0.682887 | tig0017613:+12874 | None:intergenic |
| GAATACAAGAACATCTCCAG+TGG | 0.693869 | tig0017613:+18229 | None:intergenic |
| ATCATCGTCCAAGATCCCAA+GGG | 0.700022 | tig0017613:+15404 | None:intergenic |
| CTTTGTGAACTACCATGCCA+TGG | 0.708432 | tig0017613:-13899 | Msa1361760:intron |
| ACAGTGGATTCTCAAAACAG+CGG | 0.719661 | tig0017613:-17585 | Msa1361760:CDS |
| ATACATTAAGAAACGTGACA+TGG | 0.721612 | tig0017613:+13971 | None:intergenic |
| GCTGGCGTAGCCATATCCGG+AGG | 0.727235 | tig0017613:+23083 | None:intergenic |
| GTAGTTGACGACGAAGAAGG+CGG | 0.730388 | tig0017613:-23144 | Msa1361760:CDS |
| AGTCTCGTAAATCATCACAA+TGG | 0.739888 | tig0017613:-13933 | Msa1361760:CDS |
| AACTCAGAAGAATTGCACAG+AGG | 0.778214 | tig0017613:-13749 | Msa1361760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATATTCATAGAAAA+TGG | - | tig0017613:14499-14518 | Msa1361760:CDS | 10.0% |
| !! | TTAATATAAACTGAATATTA+GGG | + | tig0017613:18642-18661 | None:intergenic | 10.0% |
| !! | ATTAATATAAACTGAATATT+AGG | + | tig0017613:18643-18662 | None:intergenic | 10.0% |
| !! | TTTAGTTAAAAATTATCATA+GGG | + | tig0017613:19973-19992 | None:intergenic | 10.0% |
| !!! | TTTTAGTTAAAAATTATCAT+AGG | + | tig0017613:19974-19993 | None:intergenic | 10.0% |
| !! | AAAAAATCATCAAAATTAAT+TGG | - | tig0017613:19990-20009 | Msa1361760:intron | 10.0% |
| !! | TCAATTATATATTTGTATTT+AGG | - | tig0017613:20851-20870 | Msa1361760:intron | 10.0% |
| !!! | TCTTTTTTAATAATTTATAC+AGG | - | tig0017613:21805-21824 | Msa1361760:intron | 10.0% |
| !!! | CTTTTTTAATAATTTATACA+GGG | - | tig0017613:21806-21825 | Msa1361760:intron | 10.0% |
| !! | TTGAAAATTGAAAATGAAAT+CGG | + | tig0017613:12916-12935 | None:intergenic | 15.0% |
| !! | CATAATAAATTCAATCAAAA+AGG | + | tig0017613:13189-13208 | None:intergenic | 15.0% |
| !!! | TTATTATGTAAAATTGATTC+TGG | - | tig0017613:13201-13220 | Msa1361760:intron | 15.0% |
| !!! | AATAATTTGATGCTTTTATT+GGG | + | tig0017613:13538-13557 | None:intergenic | 15.0% |
| !! | ATTGAAAGTTTATATATCAT+AGG | - | tig0017613:14698-14717 | Msa1361760:intron | 15.0% |
| !! | ATGAAGAAAATATTAATGTT+TGG | - | tig0017613:15463-15482 | Msa1361760:intron | 15.0% |
| !! | ATAGAAGAAAATATTATGTT+TGG | - | tig0017613:15568-15587 | Msa1361760:intron | 15.0% |
| !! | ATAGAAGAAAATATTATGTT+TGG | - | tig0017613:15568-15587 | Msa1361760:intron | 15.0% |
| !! | ATAACAGGTATATTAAAAAT+AGG | + | tig0017613:16158-16177 | None:intergenic | 15.0% |
| !! | TTGAAAAAAAAAAGTAAACA+AGG | + | tig0017613:16618-16637 | None:intergenic | 15.0% |
| !! | ATATTAAAAAGAAATACAAC+AGG | + | tig0017613:16657-16676 | None:intergenic | 15.0% |
| !!! | CAAAATGAAAACTAATATTT+TGG | + | tig0017613:17050-17069 | None:intergenic | 15.0% |
| !! | TAGTTTGATCAAAAATAAAA+TGG | - | tig0017613:17506-17525 | Msa1361760:intron | 15.0% |
| !! | AAAAATAAAATGGAATGTAA+TGG | - | tig0017613:17516-17535 | Msa1361760:intron | 15.0% |
| !!! | AAAATCTTTTTCAATATGTT+CGG | + | tig0017613:17788-17807 | None:intergenic | 15.0% |
| !!! | TTTTTTACTTTCTTTCTATT+AGG | - | tig0017613:18009-18028 | Msa1361760:intron | 15.0% |
| !! | ATTAAGAATACATATAGTAA+TGG | - | tig0017613:18273-18292 | Msa1361760:intron | 15.0% |
| !! | TTAAGAATACATATAGTAAT+GGG | - | tig0017613:18274-18293 | Msa1361760:intron | 15.0% |
| !! | AAATTACATTTATAAACAAC+AGG | + | tig0017613:18316-18335 | None:intergenic | 15.0% |
| !! | TTCAAAAATTACTTGTAATT+AGG | + | tig0017613:18594-18613 | None:intergenic | 15.0% |
| !!! | TAATTTTACTAGAAGATATT+CGG | + | tig0017613:19133-19152 | None:intergenic | 15.0% |
| !! | TTAGTTAAAAATTATCATAG+GGG | + | tig0017613:19972-19991 | None:intergenic | 15.0% |
| !! | ACAATTAATTAATAAGACTA+AGG | + | tig0017613:23005-23024 | None:intergenic | 15.0% |
| !! | ACTAGTAAAACAATTTAACA+TGG | + | tig0017613:13424-13443 | None:intergenic | 20.0% |
| !!! | CAATAATTTGATGCTTTTAT+TGG | + | tig0017613:13539-13558 | None:intergenic | 20.0% |
| !! | CTTAAAGTGAAAATCAATTA+TGG | - | tig0017613:13559-13578 | Msa1361760:intron | 20.0% |
| !! | AATAAAACAATAGCTTAAAG+TGG | - | tig0017613:13588-13607 | Msa1361760:intron | 20.0% |
| !!! | AATTTTGTTTTCTCAAAAAG+TGG | - | tig0017613:13650-13669 | Msa1361760:intron | 20.0% |
| !!! | ATTAACTTCTTTTTGGTTTT+TGG | - | tig0017613:13722-13741 | Msa1361760:CDS | 20.0% |
| !!! | TTTTAAAATTTGTTACCGAT+GGG | - | tig0017613:13763-13782 | Msa1361760:CDS | 20.0% |
| !!! | ATCCTCTTTTAACAAAATAT+AGG | - | tig0017613:13811-13830 | Msa1361760:intron | 20.0% |
| !!! | TACCTATATTTTGTTAAAAG+AGG | + | tig0017613:13816-13835 | None:intergenic | 20.0% |
| !!! | ATAAATTTTATAGATAGCGA+GGG | + | tig0017613:14487-14506 | None:intergenic | 20.0% |
| !!! | TATAAATTTTATAGATAGCG+AGG | + | tig0017613:14488-14507 | None:intergenic | 20.0% |
| !! | TAAAACATGTAAACAACAAA+AGG | - | tig0017613:14591-14610 | Msa1361760:intron | 20.0% |
| !! | TTTACAAGACATCATTATAA+TGG | + | tig0017613:15409-15428 | None:intergenic | 20.0% |
| !!! | TTTTGTTAAATCTTAGATCT+GGG | + | tig0017613:15499-15518 | None:intergenic | 20.0% |
| !! | ATGGTTTATCATATATTTAG+CGG | - | tig0017613:15851-15870 | Msa1361760:intron | 20.0% |
| !! | GTACTATACATGTTATTATA+TGG | - | tig0017613:16229-16248 | Msa1361760:intron | 20.0% |
| !! | AAAATTAAAATCTGAGTACT+CGG | + | tig0017613:16318-16337 | None:intergenic | 20.0% |
| !!! | ACCAATTCGTTATATTTTTT+AGG | - | tig0017613:16960-16979 | Msa1361760:CDS | 20.0% |
| !!! | AGTATTTTATTGAAAGATTG+CGG | - | tig0017613:17169-17188 | Msa1361760:intron | 20.0% |
| !! | TTTAAATAAAACAAGGATGA+AGG | + | tig0017613:17338-17357 | None:intergenic | 20.0% |
| !! | GTGCATATTTAAATAAAACA+AGG | + | tig0017613:17345-17364 | None:intergenic | 20.0% |
| !! | CTATTAATAAGGTTTATGTT+AGG | + | tig0017613:17409-17428 | None:intergenic | 20.0% |
| !! | CTAACATAAACCTTATTAAT+AGG | - | tig0017613:17407-17426 | Msa1361760:intron | 20.0% |
| !!! | CCAAATAAGAAATATTTTGT+GGG | + | tig0017613:17684-17703 | None:intergenic | 20.0% |
| !!! | TCCAAATAAGAAATATTTTG+TGG | + | tig0017613:17685-17704 | None:intergenic | 20.0% |
| !!! | TATTTCTTATTTGGACTATT+AGG | - | tig0017613:17690-17709 | Msa1361760:intron | 20.0% |
| !! | ATATGTCTGATATTAATTAG+AGG | - | tig0017613:18132-18151 | Msa1361760:intron | 20.0% |
| !!! | TTTTATTTTTCTAATTGTGC+AGG | - | tig0017613:18177-18196 | Msa1361760:CDS | 20.0% |
| !!! | TTTATTTTTCTAATTGTGCA+GGG | - | tig0017613:18178-18197 | Msa1361760:CDS | 20.0% |
| !! | ATTCTTAATAAGAAACAGAA+TGG | + | tig0017613:18262-18281 | None:intergenic | 20.0% |
| !!! | TTCTTTGTAAATTTTCCATA+TGG | - | tig0017613:18492-18511 | Msa1361760:intron | 20.0% |
| !!! | CAAATACATAGGAATTTTTA+AGG | + | tig0017613:18560-18579 | None:intergenic | 20.0% |
| !! | CTTAAAAATTCCTATGTATT+TGG | - | tig0017613:18558-18577 | Msa1361760:intron | 20.0% |
| !!! | TTAAAAACATTTTCTTGAAG+AGG | - | tig0017613:18948-18967 | Msa1361760:CDS | 20.0% |
| !! | AGATATTTATAGATTAACAG+TGG | + | tig0017613:19009-19028 | None:intergenic | 20.0% |
| !! | AAAGTTTCAGTTAAGAAAAA+TGG | - | tig0017613:19231-19250 | Msa1361760:intron | 20.0% |
| !! | ATCATAAATCACAAAGAATT+GGG | + | tig0017613:19342-19361 | None:intergenic | 20.0% |
| !! | AATCATAAATCACAAAGAAT+TGG | + | tig0017613:19343-19362 | None:intergenic | 20.0% |
| !! | TTTATACACATCCATATAAA+GGG | + | tig0017613:19523-19542 | None:intergenic | 20.0% |
| !! | ACTAAAATTGAAATTGCAAT+TGG | - | tig0017613:19560-19579 | Msa1361760:intron | 20.0% |
| !!! | TAAGACTATCTTTTTTGTTA+TGG | - | tig0017613:19784-19803 | Msa1361760:intron | 20.0% |
| !! | TAGTTAAAAATTATCATAGG+GGG | + | tig0017613:19971-19990 | None:intergenic | 20.0% |
| !! | AAATTAATTGGAGATAGAAA+AGG | - | tig0017613:20002-20021 | Msa1361760:intron | 20.0% |
| !!! | TTCCTTATTTGATTAGAATT+AGG | - | tig0017613:20209-20228 | Msa1361760:intron | 20.0% |
| !!! | TCCTTATTTGATTAGAATTA+GGG | - | tig0017613:20210-20229 | Msa1361760:intron | 20.0% |
| !! | TTATTTGTAGAATACTAAAG+AGG | - | tig0017613:20528-20547 | Msa1361760:intron | 20.0% |
| !! | TGTATAGTAAAATTCAGATT+AGG | + | tig0017613:21084-21103 | None:intergenic | 20.0% |
| !! | AATGTAATCTGATTTATTAC+AGG | - | tig0017613:21235-21254 | Msa1361760:intron | 20.0% |
| !!! | TTATCATTTTTGAGATCATA+GGG | + | tig0017613:21262-21281 | None:intergenic | 20.0% |
| !!! | ATTATCATTTTTGAGATCAT+AGG | + | tig0017613:21263-21282 | None:intergenic | 20.0% |
| !!! | TTTCTTTGTCAAACTTTTAT+CGG | - | tig0017613:21695-21714 | Msa1361760:intron | 20.0% |
| !! | TGTTTAAATTGCATAGAAAA+AGG | - | tig0017613:22013-22032 | Msa1361760:CDS | 20.0% |
| !! | ACAGCAAATAATAAATAAGA+TGG | + | tig0017613:22176-22195 | None:intergenic | 20.0% |
| !!! | TAATTTTGATTTACTGATAG+CGG | - | tig0017613:22210-22229 | Msa1361760:intron | 20.0% |
| !!! | ATATTAGTTTTTTTCAACTG+TGG | - | tig0017613:22440-22459 | Msa1361760:intron | 20.0% |
| !! | TAGAAGATTAACAAGTTATA+TGG | - | tig0017613:22670-22689 | Msa1361760:intron | 20.0% |
| !!! | ATCAAGTTGGTTATACTATT+AGG | - | tig0017613:13079-13098 | Msa1361760:intron | 25.0% |
| !!! | TTGCTTCTTCAATTGATTTT+TGG | + | tig0017613:13303-13322 | None:intergenic | 25.0% |
| ! | GTATGTGGATATAAACAATA+GGG | - | tig0017613:13374-13393 | Msa1361760:intron | 25.0% |
| ! | ACTTCATCGTTACAAAATAT+AGG | - | tig0017613:13446-13465 | Msa1361760:CDS | 25.0% |
| ! | CTTCATCGTTACAAAATATA+GGG | - | tig0017613:13447-13466 | Msa1361760:CDS | 25.0% |
| ! | AGCTTAAAGTTTATAAAGAG+TGG | + | tig0017613:13478-13497 | None:intergenic | 25.0% |
| ! | ACTCTTTATAAACTTTAAGC+TGG | - | tig0017613:13477-13496 | Msa1361760:intron | 25.0% |
| ! | AAAGTGAAAATCAATTATGG+AGG | - | tig0017613:13562-13581 | Msa1361760:intron | 25.0% |
| !!! | GTTTTAAAATTTGTTACCGA+TGG | - | tig0017613:13762-13781 | Msa1361760:CDS | 25.0% |
| !!! | TTTAAAATTTGTTACCGATG+GGG | - | tig0017613:13764-13783 | Msa1361760:CDS | 25.0% |
| ! | TACTATTGAAGCAAAATCAA+TGG | - | tig0017613:14170-14189 | Msa1361760:intron | 25.0% |
| !! | TAAATTTTATAGATAGCGAG+GGG | + | tig0017613:14486-14505 | None:intergenic | 25.0% |
| ! | AAATGGCACTATAGTTTATT+TGG | - | tig0017613:14516-14535 | Msa1361760:CDS | 25.0% |
| ! | AGTTTATATATCATAGGCAA+TGG | - | tig0017613:14704-14723 | Msa1361760:intron | 25.0% |
| !!! | TATTGATGCACTTTGTTTTT+TGG | + | tig0017613:14985-15004 | None:intergenic | 25.0% |
| ! | TGGTTTCCATTATAATGATA+TGG | - | tig0017613:15205-15224 | Msa1361760:intron | 25.0% |
| ! | GGTTTCCATTATAATGATAT+GGG | - | tig0017613:15206-15225 | Msa1361760:intron | 25.0% |
| ! | ATAGTACAAGTTAAAGTAGA+TGG | - | tig0017613:15434-15453 | Msa1361760:CDS | 25.0% |
| !! | CTTTTGTTAAATCTTAGATC+TGG | + | tig0017613:15500-15519 | None:intergenic | 25.0% |
| ! | ATTTAACAAAAGAAAAGCAG+CGG | - | tig0017613:15508-15527 | Msa1361760:intron | 25.0% |
| !! | TTTTGTTGAATCTTAGATCT+GGG | + | tig0017613:15604-15623 | None:intergenic | 25.0% |
| !! | TTTTGTTGAATCTTAGATCT+GGG | + | tig0017613:15604-15623 | None:intergenic | 25.0% |
| !! | TTTTTGTTGAATCTTAGATC+TGG | + | tig0017613:15710-15729 | None:intergenic | 25.0% |
| !!! | AAAAAAATATGGTGTTGTTG+AGG | - | tig0017613:15749-15768 | Msa1361760:intron | 25.0% |
| !! | TCTGAAATTCTAAGAAAAGA+AGG | + | tig0017613:15807-15826 | None:intergenic | 25.0% |
| ! | TGGTTTATCATATATTTAGC+GGG | - | tig0017613:15852-15871 | Msa1361760:intron | 25.0% |
| ! | AGAGATGATCTATATGATAT+AGG | + | tig0017613:15951-15970 | None:intergenic | 25.0% |
| !!! | TATTTGTCACTTTTCTCATT+TGG | - | tig0017613:16097-16116 | Msa1361760:CDS | 25.0% |
| !!! | ATTTGTCACTTTTCTCATTT+GGG | - | tig0017613:16098-16117 | Msa1361760:CDS | 25.0% |
| ! | CAGGTATATTAAAAATAGGT+TGG | + | tig0017613:16154-16173 | None:intergenic | 25.0% |
| ! | AAATTAAAATCTGAGTACTC+GGG | + | tig0017613:16317-16336 | None:intergenic | 25.0% |
| ! | CTTACAGAAGAAAAATTTAG+GGG | + | tig0017613:16502-16521 | None:intergenic | 25.0% |
| ! | CCTTACAGAAGAAAAATTTA+GGG | + | tig0017613:16503-16522 | None:intergenic | 25.0% |
| ! | ACCTTACAGAAGAAAAATTT+AGG | + | tig0017613:16504-16523 | None:intergenic | 25.0% |
| !! | AAACGTGCTTTATAATTTTC+AGG | - | tig0017613:16809-16828 | Msa1361760:intron | 25.0% |
| !! | AACGTGCTTTATAATTTTCA+GGG | - | tig0017613:16810-16829 | Msa1361760:intron | 25.0% |
| ! | GCCTAAAAAATATAACGAAT+TGG | + | tig0017613:16964-16983 | None:intergenic | 25.0% |
| ! | TAATGATATATGTTGTTCCA+TGG | - | tig0017613:16997-17016 | Msa1361760:intron | 25.0% |
| ! | TTGATCCTTATAAGAAATTC+TGG | - | tig0017613:17067-17086 | Msa1361760:intron | 25.0% |
| ! | TGATCCTTATAAGAAATTCT+GGG | - | tig0017613:17068-17087 | Msa1361760:intron | 25.0% |
| ! | ACATAAACCTTATTAATAGG+AGG | - | tig0017613:17410-17429 | Msa1361760:intron | 25.0% |
| ! | CCCACAAAATATTTCTTATT+TGG | - | tig0017613:17681-17700 | Msa1361760:intron | 25.0% |
| !!! | TTTTTAGTTGTAAGAAGTTG+TGG | + | tig0017613:17725-17744 | None:intergenic | 25.0% |
| !! | GCAACATAAGTATAGAATTT+TGG | - | tig0017613:17752-17771 | Msa1361760:CDS | 25.0% |
| ! | AAGGAAATTCCATGTATTAA+AGG | + | tig0017613:17848-17867 | None:intergenic | 25.0% |
| ! | GATTGTTTAAATATGCCATA+TGG | + | tig0017613:18510-18529 | None:intergenic | 25.0% |
| !!! | AATGTTTTTAAATCAGCTGA+AGG | + | tig0017613:18939-18958 | None:intergenic | 25.0% |
| ! | ACTTTCTTCCATGAATTAAT+TGG | + | tig0017613:18985-19004 | None:intergenic | 25.0% |
| ! | TCATAAATCACAAAGAATTG+GGG | + | tig0017613:19341-19360 | None:intergenic | 25.0% |
| ! | CAAAAAAGAAAAACGAGTAA+AGG | + | tig0017613:19463-19482 | None:intergenic | 25.0% |
| !!! | CTTTACTCGTTTTTCTTTTT+TGG | - | tig0017613:19461-19480 | Msa1361760:intron | 25.0% |
| ! | GTTTATACACATCCATATAA+AGG | + | tig0017613:19524-19543 | None:intergenic | 25.0% |
| !!! | TTAGTTTTTCTCATAGCAAT+AGG | - | tig0017613:20123-20142 | Msa1361760:intron | 25.0% |
| !! | TAGTTTTTCTCATAGCAATA+GGG | - | tig0017613:20124-20143 | Msa1361760:intron | 25.0% |
| ! | ACCCTAATTCTAATCAAATA+AGG | + | tig0017613:20214-20233 | None:intergenic | 25.0% |
| ! | AATAAGAGTTCGTGTAAATA+AGG | - | tig0017613:20248-20267 | Msa1361760:intron | 25.0% |
| !!! | TTTTGATGATTTCCAGTTAA+AGG | - | tig0017613:20289-20308 | Msa1361760:intron | 25.0% |
| ! | TATTTAGTAGACCAATTCTA+TGG | + | tig0017613:20721-20740 | None:intergenic | 25.0% |
| !!! | AATAATTGTTTTGTTCACTG+TGG | - | tig0017613:20737-20756 | Msa1361760:intron | 25.0% |
| !!! | ATAATTGTTTTGTTCACTGT+GGG | - | tig0017613:20738-20757 | Msa1361760:intron | 25.0% |
| ! | AGACATAAATTCTATTACAC+TGG | - | tig0017613:20924-20943 | Msa1361760:intron | 25.0% |
| !!! | AGGATTTTTTTTGTTATGTC+AGG | - | tig0017613:21139-21158 | Msa1361760:intron | 25.0% |
| !! | AAAATTAACCTAAAGTACCT+CGG | + | tig0017613:21592-21611 | None:intergenic | 25.0% |
| ! | ACGTTTCTTAATGTATACAA+GGG | - | tig0017613:21839-21858 | Msa1361760:CDS | 25.0% |
| !!! | GTTTTTTTTTATACTCATGC+CGG | - | tig0017613:22120-22139 | Msa1361760:intron | 25.0% |
| !!! | TTATTTGCTGTATGCTATTA+TGG | - | tig0017613:22185-22204 | Msa1361760:intron | 25.0% |
| ! | CATCAAATCACAACAAAAAA+GGG | + | tig0017613:22765-22784 | None:intergenic | 25.0% |
| ! | TCATATCAATGAAGAAGATT+AGG | + | tig0017613:22979-22998 | None:intergenic | 25.0% |
| ! | ATTAATTAATTGTGAGTCTG+AGG | - | tig0017613:23012-23031 | Msa1361760:CDS | 25.0% |
| !! | AATATTCACTGTTTTCAACA+AGG | - | tig0017613:23243-23262 | Msa1361760:intron | 25.0% |
| !! | ATATTCACTGTTTTCAACAA+GGG | - | tig0017613:23244-23263 | Msa1361760:intron | 25.0% |
| !! | TTTCTTTAGAACACTCTACA+AGG | + | tig0017613:12527-12546 | None:intergenic | 30.0% |
| TGAATAGTAATAGAACCTGA+GGG | + | tig0017613:12868-12887 | None:intergenic | 30.0% | |
| ATGAATAGTAATAGAACCTG+AGG | + | tig0017613:12869-12888 | None:intergenic | 30.0% | |
| ACAGTAAACGAGTAATAGAA+AGG | + | tig0017613:13142-13161 | None:intergenic | 30.0% | |
| !! | ATAGTTCAACTCACTTTTAC+AGG | + | tig0017613:13270-13289 | None:intergenic | 30.0% |
| GGTATGTGGATATAAACAAT+AGG | - | tig0017613:13373-13392 | Msa1361760:intron | 30.0% | |
| CCTACCTTGATAAAAAGATA+AGG | + | tig0017613:13503-13522 | None:intergenic | 30.0% | |
| ! | CCTTATCTTTTTATCAAGGT+AGG | - | tig0017613:13500-13519 | Msa1361760:intron | 30.0% |
| ! | TTTTTATCAAGGTAGGACTT+GGG | - | tig0017613:13507-13526 | Msa1361760:intron | 30.0% |
| GAACTAAACATACACGTATA+TGG | - | tig0017613:13672-13691 | Msa1361760:intron | 30.0% | |
| ! | CACACACATTAACTTCTTTT+TGG | - | tig0017613:13715-13734 | Msa1361760:CDS | 30.0% |
| !! | AATATAGGTACTGACTTCAA+AGG | - | tig0017613:13826-13845 | Msa1361760:intron | 30.0% |
| ! | GTGTTGTTACAGTGTTATAA+TGG | - | tig0017613:13937-13956 | Msa1361760:CDS | 30.0% |
| TTGTTACAGTGTTATAATGG+TGG | - | tig0017613:13940-13959 | Msa1361760:CDS | 30.0% | |
| TACAATCTGCACTGTATTTA+TGG | - | tig0017613:14036-14055 | Msa1361760:intron | 30.0% | |
| CAACTGAAATAAAGCAAGAT+TGG | + | tig0017613:14223-14242 | None:intergenic | 30.0% | |
| AATTTATAAAAAGGGCAACC+CGG | - | tig0017613:14298-14317 | Msa1361760:intron | 30.0% | |
| TGATTGCCTAGTTCATATTT+AGG | - | tig0017613:14564-14583 | Msa1361760:intron | 30.0% | |
| !!! | TTTTTTTTCTACCAGTCCAA+AGG | - | tig0017613:14618-14637 | Msa1361760:intron | 30.0% |
| CGATGAAAAAATGTTGTGTA+CGG | + | tig0017613:14760-14779 | None:intergenic | 30.0% | |
| GGAAAACATTCAGTGTAATA+GGG | + | tig0017613:14817-14836 | None:intergenic | 30.0% | |
| AGGAAAACATTCAGTGTAAT+AGG | + | tig0017613:14818-14837 | None:intergenic | 30.0% | |
| TCTTCAAGAATATAGCAACA+AGG | - | tig0017613:14843-14862 | Msa1361760:intron | 30.0% | |
| AAGTGCATCAATACTCAAAA+AGG | - | tig0017613:14992-15011 | Msa1361760:intron | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | + | tig0017613:15311-15330 | None:intergenic | 30.0% | |
| ! | ACATCATTATAATGGAAGAG+GGG | + | tig0017613:15401-15420 | None:intergenic | 30.0% |
| ! | GACATCATTATAATGGAAGA+GGG | + | tig0017613:15402-15421 | None:intergenic | 30.0% |
| ! | AGACATCATTATAATGGAAG+AGG | + | tig0017613:15403-15422 | None:intergenic | 30.0% |
| TTTAACAAAAGAAAAGCAGC+GGG | - | tig0017613:15509-15528 | Msa1361760:intron | 30.0% | |
| !! | AAAAAAATATGGTGTTGTCG+AGG | - | tig0017613:15533-15552 | Msa1361760:intron | 30.0% |
| ! | CTTTTGTTGAATCTTAGATC+TGG | + | tig0017613:15605-15624 | None:intergenic | 30.0% |
| ATTCAACAAAAGAAAAGCAG+TGG | - | tig0017613:15613-15632 | Msa1361760:intron | 30.0% | |
| TTCAACAAAAGAAAAGCAGT+GGG | - | tig0017613:15614-15633 | Msa1361760:intron | 30.0% | |
| AAGCAGTGGGTAAAAAAATA+TGG | - | tig0017613:15627-15646 | Msa1361760:intron | 30.0% | |
| !! | AAAAAAATATGGTGTTGTCG+AGG | - | tig0017613:15533-15552 | Msa1361760:intron | 30.0% |
| AAGCAGCGAGTAAAAAAATA+TGG | - | tig0017613:15738-15757 | Msa1361760:intron | 30.0% | |
| AGAAAAGAAGGTTCATTCTT+GGG | + | tig0017613:15795-15814 | None:intergenic | 30.0% | |
| AAGAAAAGAAGGTTCATTCT+TGG | + | tig0017613:15796-15815 | None:intergenic | 30.0% | |
| GGGTAAAAATCTAGTACATA+TGG | - | tig0017613:15832-15851 | Msa1361760:intron | 30.0% | |
| GGTTTATCATATATTTAGCG+GGG | - | tig0017613:15853-15872 | Msa1361760:intron | 30.0% | |
| TCAAGATTAACGTCTTATGT+TGG | - | tig0017613:16021-16040 | Msa1361760:intron | 30.0% | |
| GAGAAAAGTGACAAATAAAC+TGG | + | tig0017613:16094-16113 | None:intergenic | 30.0% | |
| GCTACGTAACATATAATAAC+AGG | + | tig0017613:16173-16192 | None:intergenic | 30.0% | |
| ! | CCCTAAATTTTTCTTCTGTA+AGG | - | tig0017613:16500-16519 | Msa1361760:intron | 30.0% |
| ACCTGAACTACATTATCATT+TGG | - | tig0017613:16718-16737 | Msa1361760:intron | 30.0% | |
| ! | TCCAAATGATAATGTAGTTC+AGG | + | tig0017613:16722-16741 | None:intergenic | 30.0% |
| ! | TTTGGAAGTACAGTATATTG+AGG | - | tig0017613:16736-16755 | Msa1361760:intron | 30.0% |
| ATTGAACCTATAAAGCACAA+AGG | + | tig0017613:16772-16791 | None:intergenic | 30.0% | |
| !! | CTTTATAATTTTCAGGGTAG+AGG | - | tig0017613:16816-16835 | Msa1361760:intron | 30.0% |
| ! | TGTTCAACTTAATTTTGCTG+TGG | - | tig0017613:16845-16864 | Msa1361760:intron | 30.0% |
| ! | TAATTTGCCTTCATTGAGAT+AGG | - | tig0017613:16928-16947 | Msa1361760:CDS | 30.0% |
| AAATTGTCCTATCTCAATGA+AGG | + | tig0017613:16938-16957 | None:intergenic | 30.0% | |
| GATCCTTATAAGAAATTCTG+GGG | - | tig0017613:17069-17088 | Msa1361760:intron | 30.0% | |
| TGCAGTAAATATGTAGAAAG+AGG | - | tig0017613:17129-17148 | Msa1361760:intron | 30.0% | |
| GTAAATATGTAGAAAGAGGA+TGG | - | tig0017613:17133-17152 | Msa1361760:intron | 30.0% | |
| ! | ATCAGTTGGTTATTTGGTTT+GGG | + | tig0017613:17308-17327 | None:intergenic | 30.0% |
| AACTTGATCAGTTGGTTATT+TGG | + | tig0017613:17314-17333 | None:intergenic | 30.0% | |
| TAGTAGACCTCCTATTAATA+AGG | + | tig0017613:17420-17439 | None:intergenic | 30.0% | |
| ! | ATGGAATGTAATGGTGATTT+TGG | - | tig0017613:17525-17544 | Msa1361760:intron | 30.0% |
| TCTATCCTATCTCTCTTAAT+AGG | - | tig0017613:17548-17567 | Msa1361760:intron | 30.0% | |
| TTCGTTGAATAAATGAACAG+CGG | + | tig0017613:17625-17644 | None:intergenic | 30.0% | |
| ACAGATACTCCTTTAATACA+TGG | - | tig0017613:17836-17855 | Msa1361760:intron | 30.0% | |
| !! | TTGTTTTACCTCTCTATTCA+GGG | - | tig0017613:17883-17902 | Msa1361760:intron | 30.0% |
| AAGAAACAGAATGGAAATAC+CGG | + | tig0017613:18253-18272 | None:intergenic | 30.0% | |
| TCAATGCAAGCATAAATAGA+AGG | + | tig0017613:18390-18409 | None:intergenic | 30.0% | |
| GTGTTAGATGAAACATACAT+AGG | + | tig0017613:18425-18444 | None:intergenic | 30.0% | |
| AAACTTGCATCCAAATACAT+AGG | + | tig0017613:18571-18590 | None:intergenic | 30.0% | |
| GATCTCTGATATTGAAAATC+TGG | - | tig0017613:18813-18832 | Msa1361760:intron | 30.0% | |
| TGATATTGAAAATCTGGTTG+TGG | - | tig0017613:18819-18838 | Msa1361760:intron | 30.0% | |
| TTTCGCTTCCAATTAATTCA+TGG | - | tig0017613:18974-18993 | Msa1361760:CDS | 30.0% | |
| ! | GTGCAGTTTGTACTAATTTT+TGG | - | tig0017613:19261-19280 | Msa1361760:intron | 30.0% |
| AAAGAAAAACGAGTAAAGGA+AGG | + | tig0017613:19459-19478 | None:intergenic | 30.0% | |
| ! | ATGTGTATAAACTGATAGTG+TGG | - | tig0017613:19532-19551 | Msa1361760:intron | 30.0% |
| ! | TGTGTATAAACTGATAGTGT+GGG | - | tig0017613:19533-19552 | Msa1361760:intron | 30.0% |
| AAATTCTTCTGTATATAGCC+TGG | + | tig0017613:19650-19669 | None:intergenic | 30.0% | |
| ! | ACTAGTGATTTATTAGTCTC+CGG | - | tig0017613:19820-19839 | Msa1361760:intron | 30.0% |
| GTTATCTTAGAGTATATGCT+AGG | - | tig0017613:20148-20167 | Msa1361760:intron | 30.0% | |
| TTTGGGGATCGATAATATAT+TGG | - | tig0017613:20313-20332 | Msa1361760:intron | 30.0% | |
| TTGGGGATCGATAATATATT+GGG | - | tig0017613:20314-20333 | Msa1361760:intron | 30.0% | |
| ! | ATAATATATTGGGCTTTGAC+TGG | - | tig0017613:20324-20343 | Msa1361760:intron | 30.0% |
| ! | TGGTTTTCAAAACATACAAG+TGG | + | tig0017613:20467-20486 | None:intergenic | 30.0% |
| CAACAAATGAATGAAACACA+GGG | + | tig0017613:20496-20515 | None:intergenic | 30.0% | |
| TCAACAAATGAATGAAACAC+AGG | + | tig0017613:20497-20516 | None:intergenic | 30.0% | |
| TAGATCAAATGAGATACGAT+GGG | + | tig0017613:20628-20647 | None:intergenic | 30.0% | |
| !! | TTACTTTTGCACCATAGAAT+TGG | - | tig0017613:20707-20726 | Msa1361760:intron | 30.0% |
| !! | TAATTGTTTTGTTCACTGTG+GGG | - | tig0017613:20739-20758 | Msa1361760:intron | 30.0% |
| ACTAGAGCAAAAGATTTACT+TGG | + | tig0017613:21346-21365 | None:intergenic | 30.0% | |
| ! | TTAAGTTTTCATGCTGATGA+TGG | - | tig0017613:21394-21413 | Msa1361760:intron | 30.0% |
| ! | TAAGTTTTCATGCTGATGAT+GGG | - | tig0017613:21395-21414 | Msa1361760:intron | 30.0% |
| ATCTATGCATACAGTCTATT+TGG | - | tig0017613:21508-21527 | Msa1361760:intron | 30.0% | |
| TTGACAAAGAAATAATGCAG+AGG | + | tig0017613:21687-21706 | None:intergenic | 30.0% | |
| ATACATTAAGAAACGTGACA+TGG | + | tig0017613:21835-21854 | None:intergenic | 30.0% | |
| CACGTTTCTTAATGTATACA+AGG | - | tig0017613:21838-21857 | Msa1361760:CDS | 30.0% | |
| CTGAAAAGGACAAATTGAAA+TGG | + | tig0017613:21963-21982 | None:intergenic | 30.0% | |
| !!! | TAGAAGTGCTTTTTCTAAAC+CGG | + | tig0017613:22142-22161 | None:intergenic | 30.0% |
| ! | TTTAAACGTTACACCTTTTC+AGG | - | tig0017613:22312-22331 | Msa1361760:intron | 30.0% |
| AGTATATATTCACCCTTCAT+CGG | - | tig0017613:22564-22583 | Msa1361760:intron | 30.0% | |
| AACTTTATCTAACTATGTGC+TGG | - | tig0017613:22623-22642 | Msa1361760:intron | 30.0% | |
| GCATCAAATCACAACAAAAA+AGG | + | tig0017613:22766-22785 | None:intergenic | 30.0% | |
| GAATTGAAAATAACCCACTT+TGG | + | tig0017613:22859-22878 | None:intergenic | 30.0% | |
| ATTCTCTAGTATCAACTGAT+CGG | - | tig0017613:22875-22894 | Msa1361760:intron | 30.0% | |
| GTAAATTACGGATACAGATT+TGG | - | tig0017613:23133-23152 | Msa1361760:CDS | 30.0% | |
| ! | AGTAGACCTATTCTTTTAAC+AGG | + | tig0017613:23183-23202 | None:intergenic | 30.0% |
| TTTGTAACTGCGTAACAAAA+GGG | + | tig0017613:23286-23305 | None:intergenic | 30.0% | |
| ATTTGTAACTGCGTAACAAA+AGG | + | tig0017613:23287-23306 | None:intergenic | 30.0% | |
| TCAAAATTTGAAGACGAGTG+AGG | + | tig0017613:12550-12569 | None:intergenic | 35.0% | |
| ! | TCACTCGTCTTCAAATTTTG+AGG | - | tig0017613:12549-12568 | Msa1361760:three_prime_UTR | 35.0% |
| AAGAAGAAGAAGAAGCAGAA+GGG | + | tig0017613:12697-12716 | None:intergenic | 35.0% | |
| ATTTGTAGACAGGTAATCGT+TGG | + | tig0017613:12760-12779 | None:intergenic | 35.0% | |
| AGTTTCAACCAAGTAGAGAA+TGG | + | tig0017613:12792-12811 | None:intergenic | 35.0% | |
| ! | GTTAAACTTGGTGATCAAGT+TGG | - | tig0017613:13066-13085 | Msa1361760:intron | 35.0% |
| !!! | CTGGCCTTATCTTTTTATCA+AGG | - | tig0017613:13496-13515 | Msa1361760:intron | 35.0% |
| ! | CTTTTTATCAAGGTAGGACT+TGG | - | tig0017613:13506-13525 | Msa1361760:intron | 35.0% |
| !!! | TTTTTGGTTTTTGGCAGTGT+AGG | - | tig0017613:13731-13750 | Msa1361760:CDS | 35.0% |
| AAGCAAGATGTCAGTTGAAA+TGG | + | tig0017613:13984-14003 | None:intergenic | 35.0% | |
| ATTTCAACTGACATCTTGCT+TGG | - | tig0017613:13983-14002 | Msa1361760:intron | 35.0% | |
| CTTGCTTGGACTATTGAAAA+AGG | - | tig0017613:13997-14016 | Msa1361760:intron | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | + | tig0017613:14390-14409 | None:intergenic | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | tig0017613:14390-14409 | Msa1361760:intron | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | tig0017613:14395-14414 | None:intergenic | 35.0% | |
| TAGCTGCCTAAATATGAACT+AGG | + | tig0017613:14573-14592 | None:intergenic | 35.0% | |
| TATATCATAGGCAATGGCTA+TGG | - | tig0017613:14710-14729 | Msa1361760:intron | 35.0% | |
| CTATATTCTTGAAGATGACG+AGG | + | tig0017613:14838-14857 | None:intergenic | 35.0% | |
| TCAGTGGAGTAAGAATACAA+GGG | + | tig0017613:14944-14963 | None:intergenic | 35.0% | |
| ATCAGTGGAGTAAGAATACA+AGG | + | tig0017613:14945-14964 | None:intergenic | 35.0% | |
| TTGTATTCTTACTCCACTGA+TGG | - | tig0017613:14944-14963 | Msa1361760:intron | 35.0% | |
| AAGTAAATGAACTCCATCAG+TGG | + | tig0017613:14960-14979 | None:intergenic | 35.0% | |
| TGCATCAATACTCAAAAAGG+AGG | - | tig0017613:14995-15014 | Msa1361760:intron | 35.0% | |
| TGAGGTGACTATTGCTATAA+AGG | + | tig0017613:15043-15062 | None:intergenic | 35.0% | |
| TTATAGCAATAGTCACCTCA+TGG | - | tig0017613:15043-15062 | Msa1361760:intron | 35.0% | |
| CGTACAATACACTAATTGGT+GGG | + | tig0017613:15280-15299 | None:intergenic | 35.0% | |
| CAACCTCTTGTGTAAAAAAC+AGG | + | tig0017613:15312-15331 | None:intergenic | 35.0% | |
| ! | CATCATTATAATGGAAGAGG+GGG | + | tig0017613:15400-15419 | None:intergenic | 35.0% |
| AAATCTTAGATCTGGGAGAT+AGG | + | tig0017613:15492-15511 | None:intergenic | 35.0% | |
| AAGCAGCGGGTAAAAAAATA+TGG | - | tig0017613:15522-15541 | Msa1361760:intron | 35.0% | |
| !! | AAATATGGTGTTGTTGAGGT+TGG | - | tig0017613:15753-15772 | Msa1361760:intron | 35.0% |
| TTCTTAGAATTTCAGACGAG+TGG | - | tig0017613:15811-15830 | Msa1361760:intron | 35.0% | |
| TCTTAGAATTTCAGACGAGT+GGG | - | tig0017613:15812-15831 | Msa1361760:intron | 35.0% | |
| !! | GAAATTGAAAGTCTTGTTCC+TGG | - | tig0017613:16283-16302 | Msa1361760:intron | 35.0% |
| ! | TGCCGTTTAACAGAAAAAAG+CGG | - | tig0017613:16345-16364 | Msa1361760:intron | 35.0% |
| GCAAAACACATGCAAATTGA+AGG | - | tig0017613:16458-16477 | Msa1361760:intron | 35.0% | |
| AGAAGAAAAATTTAGGGGCA+AGG | + | tig0017613:16497-16516 | None:intergenic | 35.0% | |
| ACTATGCCTTTGTGCTTTAT+AGG | - | tig0017613:16763-16782 | Msa1361760:intron | 35.0% | |
| GATCAGTTGGTTATTTGGTT+TGG | + | tig0017613:17309-17328 | None:intergenic | 35.0% | |
| ATGAAGGAAACTTGATCAGT+TGG | + | tig0017613:17322-17341 | None:intergenic | 35.0% | |
| TGCACACCTACTTACATAAT+TGG | - | tig0017613:17360-17379 | Msa1361760:intron | 35.0% | |
| GCACACCTACTTACATAATT+GGG | - | tig0017613:17361-17380 | Msa1361760:intron | 35.0% | |
| ATAGGCCCAATTATGTAAGT+AGG | + | tig0017613:17369-17388 | None:intergenic | 35.0% | |
| ATAAGGTTTATGTTAGGCGT+AGG | + | tig0017613:17403-17422 | None:intergenic | 35.0% | |
| GGTTTCCTATTAAGAGAGAT+AGG | + | tig0017613:17556-17575 | None:intergenic | 35.0% | |
| GATGTTCTTGTATTCCTTAC+TGG | - | tig0017613:17582-17601 | Msa1361760:CDS | 35.0% | |
| ! | ATGGAATTTCCTTTTGTTCC+AGG | - | tig0017613:17855-17874 | Msa1361760:intron | 35.0% |
| ! | ATTTCCTTTTGTTCCAGGAT+TGG | - | tig0017613:17860-17879 | Msa1361760:intron | 35.0% |
| !! | GTTGTTTTACCTCTCTATTC+AGG | - | tig0017613:17882-17901 | Msa1361760:intron | 35.0% |
| ATTGTCTATGTTGTTGACAG+TGG | - | tig0017613:18202-18221 | Msa1361760:CDS | 35.0% | |
| ! | CTATAAAAGCACATGCGAAA+CGG | - | tig0017613:18351-18370 | Msa1361760:intron | 35.0% |
| CAAGCATAAATAGAAGGTTG+GGG | + | tig0017613:18384-18403 | None:intergenic | 35.0% | |
| GCAAGCATAAATAGAAGGTT+GGG | + | tig0017613:18385-18404 | None:intergenic | 35.0% | |
| TGCAAGCATAAATAGAAGGT+TGG | + | tig0017613:18386-18405 | None:intergenic | 35.0% | |
| ! | TGCTTGCATTGAATTTTGTC+TGG | - | tig0017613:18398-18417 | Msa1361760:intron | 35.0% |
| ATCTAACACTTCCATTGCAA+AGG | - | tig0017613:18436-18455 | Msa1361760:intron | 35.0% | |
| TCTAACACTTCCATTGCAAA+GGG | - | tig0017613:18437-18456 | Msa1361760:intron | 35.0% | |
| !! | AATCCACTGTTGATTCATGA+AGG | - | tig0017613:18526-18545 | Msa1361760:intron | 35.0% |
| AATCCTTCATGAATCAACAG+TGG | + | tig0017613:18532-18551 | None:intergenic | 35.0% | |
| AAGCGAAAAAGAGTTGAGAA+GGG | + | tig0017613:18737-18756 | None:intergenic | 35.0% | |
| GATATCAAGATGACTGAGAA+AGG | + | tig0017613:18760-18779 | None:intergenic | 35.0% | |
| !! | GAAAGTGTCATCAGATATTC+AGG | + | tig0017613:19068-19087 | None:intergenic | 35.0% |
| CTGATGACACTTTCAACAAA+AGG | - | tig0017613:19074-19093 | Msa1361760:intron | 35.0% | |
| AAGAACTAATTACACTGCTG+AGG | - | tig0017613:19208-19227 | Msa1361760:intron | 35.0% | |
| ! | TTTTGTTAGTGTTCTGCTCA+TGG | - | tig0017613:19361-19380 | Msa1361760:intron | 35.0% |
| !!! | ATCAAGGTCGTTTTTTCTCT+TGG | + | tig0017613:19425-19444 | None:intergenic | 35.0% |
| GAAGGATAAAGAATGCATCA+AGG | + | tig0017613:19441-19460 | None:intergenic | 35.0% | |
| AAGCATCCTTACCCTTTATA+TGG | - | tig0017613:19509-19528 | Msa1361760:intron | 35.0% | |
| ACACATCCATATAAAGGGTA+AGG | + | tig0017613:19518-19537 | None:intergenic | 35.0% | |
| TGGTAAGTAGAGAATTGTTG+TGG | + | tig0017613:19605-19624 | None:intergenic | 35.0% | |
| TCTTAACCACATGTCTAATG+AGG | - | tig0017613:19672-19691 | Msa1361760:intron | 35.0% | |
| CTTAACCACATGTCTAATGA+GGG | - | tig0017613:19673-19692 | Msa1361760:intron | 35.0% | |
| AGATTTGATCTCTGTATCTC+TGG | + | tig0017613:19703-19722 | None:intergenic | 35.0% | |
| ! | ATCCAGGTCTGTAATTTTTG+TGG | - | tig0017613:19736-19755 | Msa1361760:intron | 35.0% |
| TTCCACAAAAATTACAGACC+TGG | + | tig0017613:19741-19760 | None:intergenic | 35.0% | |
| TGATTTCCAGTTAAAGGCTT+TGG | - | tig0017613:20295-20314 | Msa1361760:intron | 35.0% | |
| GATTTCCAGTTAAAGGCTTT+GGG | - | tig0017613:20296-20315 | Msa1361760:intron | 35.0% | |
| ATTTCCAGTTAAAGGCTTTG+GGG | - | tig0017613:20297-20316 | Msa1361760:intron | 35.0% | |
| !! | AATGAAACACAGGGTTTTAG+TGG | + | tig0017613:20487-20506 | None:intergenic | 35.0% |
| GTAGATCAAATGAGATACGA+TGG | + | tig0017613:20629-20648 | None:intergenic | 35.0% | |
| TCGTATCTCATTTGATCTAC+TGG | - | tig0017613:20629-20648 | Msa1361760:intron | 35.0% | |
| ! | ATTACACTGGTTGACACAAA+TGG | - | tig0017613:20937-20956 | Msa1361760:intron | 35.0% |
| TTGTCGTTGTACTACTGTTA+AGG | - | tig0017613:21119-21138 | Msa1361760:intron | 35.0% | |
| TTGTTATGTCAGGCAATTGT+TGG | - | tig0017613:21149-21168 | Msa1361760:intron | 35.0% | |
| GGAGATAATTACAATTGCTG+CGG | - | tig0017613:21310-21329 | Msa1361760:intron | 35.0% | |
| GAGCAAAAGATTTACTTGGA+CGG | + | tig0017613:21342-21361 | None:intergenic | 35.0% | |
| ATACAGTCTATTTGGATCTC+AGG | - | tig0017613:21516-21535 | Msa1361760:intron | 35.0% | |
| TACAGTCTATTTGGATCTCA+GGG | - | tig0017613:21517-21536 | Msa1361760:intron | 35.0% | |
| AGAGGAAATTACAGCTATAC+AGG | + | tig0017613:21669-21688 | None:intergenic | 35.0% | |
| ATTGTGATGATTTACGAGAC+TGG | + | tig0017613:21871-21890 | None:intergenic | 35.0% | |
| AGTCTCGTAAATCATCACAA+TGG | - | tig0017613:21870-21889 | Msa1361760:intron | 35.0% | |
| TGGTGAAAACTGAACTGAAA+AGG | + | tig0017613:21977-21996 | None:intergenic | 35.0% | |
| TTCACCAATTCATGTTGACA+CGG | - | tig0017613:21990-22009 | Msa1361760:intron | 35.0% | |
| GCTCCTTGATTTAGTTACTA+AGG | - | tig0017613:22276-22295 | Msa1361760:intron | 35.0% | |
| TCGCCTTAGTAACTAAATCA+AGG | + | tig0017613:22282-22301 | None:intergenic | 35.0% | |
| GCTTTCTTAACAACCTGAAA+AGG | + | tig0017613:22328-22347 | None:intergenic | 35.0% | |
| GTTAAGAAAGCAGTTATTGC+TGG | - | tig0017613:22337-22356 | Msa1361760:intron | 35.0% | |
| !! | GGACTGTATGGCTTTTAAAA+AGG | + | tig0017613:22508-22527 | None:intergenic | 35.0% |
| TCTTCCAGCATTTGAATTTC+TGG | - | tig0017613:22715-22734 | Msa1361760:intron | 35.0% | |
| AACACCAGAAATTCAAATGC+TGG | + | tig0017613:22722-22741 | None:intergenic | 35.0% | |
| !! | GCATTTGAATTTCTGGTGTT+TGG | - | tig0017613:22722-22741 | Msa1361760:intron | 35.0% |
| TTTGCAGAGTAAATCCAAAG+TGG | - | tig0017613:22842-22861 | Msa1361760:CDS | 35.0% | |
| TTGCAGAGTAAATCCAAAGT+GGG | - | tig0017613:22843-22862 | Msa1361760:CDS | 35.0% | |
| GAGCAGATTAATCAGTAATG+TGG | - | tig0017613:23078-23097 | Msa1361760:CDS | 35.0% | |
| CATCTCTCCTGTGTAAATTA+CGG | - | tig0017613:23121-23140 | Msa1361760:CDS | 35.0% | |
| TCTGTATCCGTAATTTACAC+AGG | + | tig0017613:23131-23150 | None:intergenic | 35.0% | |
| CAAGGACCTGTTAAAAGAAT+AGG | - | tig0017613:23174-23193 | Msa1361760:CDS | 35.0% | |
| ATAGGTCTACTTACAAGCAA+TGG | - | tig0017613:23192-23211 | Msa1361760:CDS | 35.0% | |
| GAGGTAACGAAAGTTGAGAA+TGG | - | tig0017613:12595-12614 | Msa1361760:three_prime_UTR | 40.0% | |
| GAAGAAGAAGAAGAAGCAGA+AGG | + | tig0017613:12698-12717 | None:intergenic | 40.0% | |
| TCTTCTTCTTCTTCTTCCTC+CGG | - | tig0017613:12704-12723 | Msa1361760:three_prime_UTR | 40.0% | |
| CATTCCACCACTATCATTGT+CGG | - | tig0017613:12812-12831 | Msa1361760:three_prime_UTR | 40.0% | |
| TGCATTGCAGTATCTGATTG+AGG | - | tig0017613:12948-12967 | Msa1361760:CDS | 40.0% | |
| !! | TGTTCAGGCTGTTTCTTCTA+GGG | - | tig0017613:13026-13045 | Msa1361760:intron | 40.0% |
| CAAGAGATGGGAGTTAAACT+TGG | - | tig0017613:13054-13073 | Msa1361760:intron | 40.0% | |
| ATACCAAGCCCAATAGAGTT+GGG | + | tig0017613:13358-13377 | None:intergenic | 40.0% | |
| AATAGGGTTCCCAGAACAAT+AGG | - | tig0017613:13390-13409 | Msa1361760:intron | 40.0% | |
| GTAGAAGAGCCTATTGTTCT+GGG | + | tig0017613:13402-13421 | None:intergenic | 40.0% | |
| GCAATAATCAAACGCAACTC+TGG | + | tig0017613:14144-14163 | None:intergenic | 40.0% | |
| CAAGATTGGACGAAAACCTT+GGG | + | tig0017613:14209-14228 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | tig0017613:14364-14383 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | tig0017613:14396-14415 | None:intergenic | 40.0% | |
| TTTGATCAGTGCAATGCCTT+TGG | + | tig0017613:14637-14656 | None:intergenic | 40.0% | |
| AGTGGAGTAAGAATACAAGG+GGG | + | tig0017613:14942-14961 | None:intergenic | 40.0% | |
| CAGTGGAGTAAGAATACAAG+GGG | + | tig0017613:14943-14962 | None:intergenic | 40.0% | |
| CCAAACTCACAAAGTTATGC+AGG | + | tig0017613:15074-15093 | None:intergenic | 40.0% | |
| CCTGCATAACTTTGTGAGTT+TGG | - | tig0017613:15071-15090 | Msa1361760:intron | 40.0% | |
| TGGAAACCACTAGATCTGAA+GGG | + | tig0017613:15194-15213 | None:intergenic | 40.0% | |
| ATGGAAACCACTAGATCTGA+AGG | + | tig0017613:15195-15214 | None:intergenic | 40.0% | |
| GGCTGCCCATATCATTATAA+TGG | + | tig0017613:15214-15233 | None:intergenic | 40.0% | |
| TTATAATGATATGGGCAGCC+TGG | - | tig0017613:15214-15233 | Msa1361760:intron | 40.0% | |
| GCGTACAATACACTAATTGG+TGG | + | tig0017613:15281-15300 | None:intergenic | 40.0% | |
| GCTGCGTACAATACACTAAT+TGG | + | tig0017613:15284-15303 | None:intergenic | 40.0% | |
| CTTGTGTAAAAAACAGGGCA+AGG | + | tig0017613:15306-15325 | None:intergenic | 40.0% | |
| !!! | TGCCCTGTTTTTTACACAAG+AGG | - | tig0017613:15306-15325 | Msa1361760:intron | 40.0% |
| !! | AAATATGGTGTTGTCGAGGT+TGG | - | tig0017613:15537-15556 | Msa1361760:intron | 40.0% |
| GAATCTTAGATCTGGGAGAT+AGG | + | tig0017613:15597-15616 | None:intergenic | 40.0% | |
| !! | AAATATGGTGTTGTCGAGGT+TGG | - | tig0017613:15537-15556 | Msa1361760:intron | 40.0% |
| GAATCTTAGATCTGGGAGAT+AGG | + | tig0017613:15597-15616 | None:intergenic | 40.0% | |
| !!! | TGTCACTTTTCTCATTTGGG+CGG | - | tig0017613:16101-16120 | Msa1361760:CDS | 40.0% |
| GGTTGGATTGAAAGTGAAAC+AGG | + | tig0017613:16137-16156 | None:intergenic | 40.0% | |
| !!! | CGCCGCTTTTTTCTGTTAAA+CGG | + | tig0017613:16350-16369 | None:intergenic | 40.0% |
| TGTTCCATGGTGTTTGCATT+AGG | - | tig0017613:17010-17029 | Msa1361760:intron | 40.0% | |
| TAAGCCTAATGCAAACACCA+TGG | + | tig0017613:17017-17036 | None:intergenic | 40.0% | |
| GTTTGCATTAGGCTTACTCA+TGG | - | tig0017613:17021-17040 | Msa1361760:intron | 40.0% | |
| GAGCCCCAGAATTTCTTATA+AGG | + | tig0017613:17075-17094 | None:intergenic | 40.0% | |
| ATTGCGGTTATGTTTCCAAC+AGG | - | tig0017613:17185-17204 | Msa1361760:intron | 40.0% | |
| TTGCGGTTATGTTTCCAACA+GGG | - | tig0017613:17186-17205 | Msa1361760:intron | 40.0% | |
| CAATTCTATAACTGCCCTGT+TGG | + | tig0017613:17203-17222 | None:intergenic | 40.0% | |
| CTAGAACTAACTACACCTCT+AGG | - | tig0017613:17262-17281 | Msa1361760:intron | 40.0% | |
| !! | TATTTGGTTTGGGAGAGACT+AGG | + | tig0017613:17298-17317 | None:intergenic | 40.0% |
| CTCTCTTAATAGGAAACCAC+TGG | - | tig0017613:17558-17577 | Msa1361760:intron | 40.0% | |
| GAATACAAGAACATCTCCAG+TGG | + | tig0017613:17577-17596 | None:intergenic | 40.0% | |
| CGATATCATCTTGACCAGTA+AGG | + | tig0017613:17599-17618 | None:intergenic | 40.0% | |
| !! | ACTAATCGAAAGCACTCTTC+AGG | - | tig0017613:17654-17673 | Msa1361760:intron | 40.0% |
| ACAACCAATCCTGGAACAAA+AGG | + | tig0017613:17867-17886 | None:intergenic | 40.0% | |
| AGAGGTAAAACAACCAATCC+TGG | + | tig0017613:17876-17895 | None:intergenic | 40.0% | |
| ! | CCACAGATGTATTTCTAACC+TGG | + | tig0017613:17923-17942 | None:intergenic | 40.0% |
| CCAGGTTAGAAATACATCTG+TGG | - | tig0017613:17920-17939 | Msa1361760:CDS | 40.0% | |
| ACTACTTTCCTCTTTCCTCT+AGG | + | tig0017613:18055-18074 | None:intergenic | 40.0% | |
| ! | ACAGTGGATTCTCAAAACAG+CGG | - | tig0017613:18218-18237 | Msa1361760:CDS | 40.0% |
| AAAACAGCGGTTCTACAATC+CGG | - | tig0017613:18231-18250 | Msa1361760:CDS | 40.0% | |
| CTAACACTTCCATTGCAAAG+GGG | - | tig0017613:18438-18457 | Msa1361760:intron | 40.0% | |
| GAAGCGAAAAAGAGTTGAGA+AGG | + | tig0017613:18738-18757 | None:intergenic | 40.0% | |
| TTCGACCAGGAAAATGTTAC+AGG | - | tig0017613:18893-18912 | Msa1361760:intron | 40.0% | |
| ! | AGTCACCTGTAACATTTTCC+TGG | + | tig0017613:18901-18920 | None:intergenic | 40.0% |
| AGATATTCAGGCATTCGCAA+AGG | + | tig0017613:19056-19075 | None:intergenic | 40.0% | |
| ! | GTATAAACTGATAGTGTGGG+TGG | - | tig0017613:19536-19555 | Msa1361760:intron | 40.0% |
| GAATTCCCTCATTAGACATG+TGG | + | tig0017613:19681-19700 | None:intergenic | 40.0% | |
| ATTACAGACCTGGATTACAC+AGG | + | tig0017613:19731-19750 | None:intergenic | 40.0% | |
| AGTAGAGAACTTCCAAAGCT+CGG | + | tig0017613:20379-20398 | None:intergenic | 40.0% | |
| CAAGTGGAATTTCTGCAACT+TGG | + | tig0017613:20451-20470 | None:intergenic | 40.0% | |
| ! | CACAAATTAGTTTCCACCAC+TGG | + | tig0017613:20669-20688 | None:intergenic | 40.0% |
| TAACAACCAGTGTGAGTAGA+AGG | + | tig0017613:20968-20987 | None:intergenic | 40.0% | |
| CAAATCCGAAATCTCCTTGT+TGG | - | tig0017613:20996-21015 | Msa1361760:intron | 40.0% | |
| TATATCGTCAATCCTCACTG+AGG | - | tig0017613:21040-21059 | Msa1361760:intron | 40.0% | |
| AGAAATGCATGATAGAGCAC+CGG | + | tig0017613:21192-21211 | None:intergenic | 40.0% | |
| AGTACCATTGTGTGTGAAAG+AGG | + | tig0017613:21629-21648 | None:intergenic | 40.0% | |
| AACACCGTGTCAACATGAAT+TGG | + | tig0017613:21997-22016 | None:intergenic | 40.0% | |
| AACTCAGAAGAATTGCACAG+AGG | - | tig0017613:22054-22073 | Msa1361760:intron | 40.0% | |
| AGAAGAATTGCACAGAGGAT+AGG | - | tig0017613:22059-22078 | Msa1361760:intron | 40.0% | |
| ATCTTGCGAAAGTGATATGC+AGG | - | tig0017613:22094-22113 | Msa1361760:intron | 40.0% | |
| AGGTGAGTACTCGAGATAAT+AGG | - | tig0017613:22386-22405 | Msa1361760:intron | 40.0% | |
| TAAAAGCCATACAGTCCTGA+TGG | - | tig0017613:22511-22530 | Msa1361760:intron | 40.0% | |
| AAAAGCCATACAGTCCTGAT+GGG | - | tig0017613:22512-22531 | Msa1361760:intron | 40.0% | |
| CAAATGCTGGAAGAGACTAT+GGG | + | tig0017613:22709-22728 | None:intergenic | 40.0% | |
| TCAAATGCTGGAAGAGACTA+TGG | + | tig0017613:22710-22729 | None:intergenic | 40.0% | |
| TGTGATTTGATGCCAAACCT+TGG | - | tig0017613:22773-22792 | Msa1361760:CDS | 40.0% | |
| ATTTGATGCCAAACCTTGGA+TGG | - | tig0017613:22777-22796 | Msa1361760:CDS | 40.0% | |
| TGATGACAATAGATCCCTCA+TGG | - | tig0017613:22914-22933 | Msa1361760:intron | 40.0% | |
| AATAGATCCCTCATGGCTAT+TGG | - | tig0017613:22921-22940 | Msa1361760:intron | 40.0% | |
| ! | TAATTGTGAGTCTGAGGTGA+AGG | - | tig0017613:23018-23037 | Msa1361760:CDS | 40.0% |
| !! | TGCAGTTGATAGTAGTCACA+AGG | - | tig0017613:23156-23175 | Msa1361760:CDS | 40.0% |
| GGTTGAGATTCGTCATATGT+AGG | - | tig0017613:23213-23232 | Msa1361760:five_prime_UTR | 40.0% | |
| ACACTCTACAAGGTCCCAAT+TGG | + | tig0017613:12517-12536 | None:intergenic | 45.0% | |
| AGTTGAGAATGGCGCAATTC+TGG | - | tig0017613:12606-12625 | Msa1361760:three_prime_UTR | 45.0% | |
| TCTTCTTCTTCCTCCGGATA+TGG | - | tig0017613:12710-12729 | Msa1361760:three_prime_UTR | 45.0% | |
| TTGGCGTTGTTTATCGATGC+TGG | + | tig0017613:12741-12760 | None:intergenic | 45.0% | |
| ACTATCATTGTCGGCGAAAC+CGG | - | tig0017613:12821-12840 | Msa1361760:exon | 45.0% | |
| CAAAACCACTCAAATCCCTC+AGG | - | tig0017613:12850-12869 | Msa1361760:CDS | 45.0% | |
| TAGAACCTGAGGGATTTGAG+TGG | + | tig0017613:12858-12877 | None:intergenic | 45.0% | |
| TTGCAGTATCTGATTGAGGC+TGG | - | tig0017613:12952-12971 | Msa1361760:CDS | 45.0% | |
| AGTATCTGATTGAGGCTGGT+TGG | - | tig0017613:12956-12975 | Msa1361760:CDS | 45.0% | |
| ! | GTATCTGATTGAGGCTGGTT+GGG | - | tig0017613:12957-12976 | Msa1361760:CDS | 45.0% |
| !! | CTGTTCAGGCTGTTTCTTCT+AGG | - | tig0017613:13025-13044 | Msa1361760:intron | 45.0% |
| !! | TTCTAGGGTTGCTCAAGAGA+TGG | - | tig0017613:13041-13060 | Msa1361760:intron | 45.0% |
| ! | TCTAGGGTTGCTCAAGAGAT+GGG | - | tig0017613:13042-13061 | Msa1361760:intron | 45.0% |
| CATACCAAGCCCAATAGAGT+TGG | + | tig0017613:13359-13378 | None:intergenic | 45.0% | |
| ! | ACTCTATTGGGCTTGGTATG+TGG | - | tig0017613:13359-13378 | Msa1361760:intron | 45.0% |
| GGTAGAAGAGCCTATTGTTC+TGG | + | tig0017613:13403-13422 | None:intergenic | 45.0% | |
| GATCATTCATCATCTCCCTC+AGG | + | tig0017613:13794-13813 | None:intergenic | 45.0% | |
| ! | TGGTGGATGAAGCTCATGAA+AGG | - | tig0017613:13957-13976 | Msa1361760:CDS | 45.0% |
| GCAAGATTGGACGAAAACCT+TGG | + | tig0017613:14210-14229 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | tig0017613:14365-14384 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | tig0017613:14368-14387 | None:intergenic | 45.0% | |
| AACTTGAACCCGTGACCTTT+CGG | - | tig0017613:14423-14442 | Msa1361760:intron | 45.0% | |
| GTTGTTGTCATGTGACCGAA+AGG | + | tig0017613:14441-14460 | None:intergenic | 45.0% | |
| CAACTTTACCAGTTGCACCA+AGG | - | tig0017613:14457-14476 | Msa1361760:intron | 45.0% | |
| CTATGGTGCACAAGCTAGAT+GGG | - | tig0017613:14727-14746 | Msa1361760:intron | 45.0% | |
| AGTAAGAATACAAGGGGGAG+GGG | + | tig0017613:14937-14956 | None:intergenic | 45.0% | |
| GAGTAAGAATACAAGGGGGA+GGG | + | tig0017613:14938-14957 | None:intergenic | 45.0% | |
| GTTATGCAGGAATGACCATG+AGG | + | tig0017613:15061-15080 | None:intergenic | 45.0% | |
| TGTTTCCCCTTCAGATCTAG+TGG | - | tig0017613:15185-15204 | Msa1361760:intron | 45.0% | |
| GGAAACCACTAGATCTGAAG+GGG | + | tig0017613:15193-15212 | None:intergenic | 45.0% | |
| GTTGTTGTCACCTGACTGAA+AGG | + | tig0017613:15357-15376 | None:intergenic | 45.0% | |
| ACAACTTTACTGTTGCGCCA+AGG | - | tig0017613:15372-15391 | Msa1361760:CDS | 45.0% | |
| AGCGGGGCTCTATTATTCAA+TGG | - | tig0017613:15869-15888 | Msa1361760:intron | 45.0% | |
| AGTACTCGGGATGAAAAACC+AGG | + | tig0017613:16304-16323 | None:intergenic | 45.0% | |
| GAACCTGAAAATGAGGCGAA+TGG | - | tig0017613:16371-16390 | Msa1361760:intron | 45.0% | |
| ! | AGTCCATTCGCCTCATTTTC+AGG | + | tig0017613:16377-16396 | None:intergenic | 45.0% |
| ACCTGCAATCTTATCAGTCG+AGG | - | tig0017613:16406-16425 | Msa1361760:intron | 45.0% | |
| ACCTCGACTGATAAGATTGC+AGG | + | tig0017613:16410-16429 | None:intergenic | 45.0% | |
| ATCAGTCGAGGTACGAATTC+TGG | - | tig0017613:16418-16437 | Msa1361760:intron | 45.0% | |
| TACCCCCTTGGAATAACCAT+GGG | + | tig0017613:16555-16574 | None:intergenic | 45.0% | |
| ATACCCCCTTGGAATAACCA+TGG | + | tig0017613:16556-16575 | None:intergenic | 45.0% | |
| TTGCAAATCAGATACCCCCT+TGG | + | tig0017613:16567-16586 | None:intergenic | 45.0% | |
| !! | GGGGGTATCTGATTTGCAAT+TGG | - | tig0017613:16568-16587 | Msa1361760:intron | 45.0% |
| ACCTGTCCAAGACTATGTTC+AGG | - | tig0017613:16869-16888 | Msa1361760:intron | 45.0% | |
| CAGTACTCTTGATCCATGAG+CGG | - | tig0017613:16904-16923 | Msa1361760:intron | 45.0% | |
| AGTACTCTTGATCCATGAGC+GGG | - | tig0017613:16905-16924 | Msa1361760:intron | 45.0% | |
| !! | GAAATTCTGGGGCTCTTCAT+TGG | - | tig0017613:17080-17099 | Msa1361760:intron | 45.0% |
| CTAGGTTCTCTGATTCCTAG+AGG | + | tig0017613:17280-17299 | None:intergenic | 45.0% | |
| GCGTAGGCGCAATAATCAAT+AGG | + | tig0017613:17387-17406 | None:intergenic | 45.0% | |
| ! | GTGTTTTCTCCAACTCCTAG+AGG | - | tig0017613:18037-18056 | Msa1361760:intron | 45.0% |
| ! | TTCCTCTTTCCTCTAGGAGT+TGG | + | tig0017613:18049-18068 | None:intergenic | 45.0% |
| AGCAGAAACATCACTCACGT+TGG | - | tig0017613:18090-18109 | Msa1361760:intron | 45.0% | |
| AGAAACATCACTCACGTTGG+AGG | - | tig0017613:18093-18112 | Msa1361760:intron | 45.0% | |
| TGAGTACAACCCCTTTGCAA+TGG | + | tig0017613:18450-18469 | None:intergenic | 45.0% | |
| TGGTTGTGGCTCCAATTTCT+AGG | - | tig0017613:18833-18852 | Msa1361760:intron | 45.0% | |
| GGTTGTGGCTCCAATTTCTA+GGG | - | tig0017613:18834-18853 | Msa1361760:intron | 45.0% | |
| CTAGCAGAAGCCCTAGAAAT+TGG | + | tig0017613:18847-18866 | None:intergenic | 45.0% | |
| TGCTAGACAAAGAGCTGGTA+GGG | - | tig0017613:18861-18880 | Msa1361760:intron | 45.0% | |
| ! | CAGGCATTCGCAAAGGATTT+TGG | + | tig0017613:19049-19068 | None:intergenic | 45.0% |
| AAGGATGCTTCAGAGTGAAC+TGG | + | tig0017613:19499-19518 | None:intergenic | 45.0% | |
| GCAGTCATGTGCACAATGAA+TGG | + | tig0017613:19625-19644 | None:intergenic | 45.0% | |
| TCTTGTCTCCTGTGTAATCC+AGG | - | tig0017613:19720-19739 | Msa1361760:intron | 45.0% | |
| AAAGCTCGGATCATTGCTTC+AGG | + | tig0017613:20365-20384 | None:intergenic | 45.0% | |
| TGAAGCAATGATCCGAGCTT+TGG | - | tig0017613:20364-20383 | Msa1361760:intron | 45.0% | |
| TTGGAAGTTCTCTACTCCCT+TGG | - | tig0017613:20383-20402 | Msa1361760:intron | 45.0% | |
| TGGAAGTTCTCTACTCCCTT+GGG | - | tig0017613:20384-20403 | Msa1361760:intron | 45.0% | |
| ATCATCGTCCAAGATCCCAA+GGG | + | tig0017613:20402-20421 | None:intergenic | 45.0% | |
| !! | TCCAGTTGGTGAAGTAAGCT+TGG | + | tig0017613:20426-20445 | None:intergenic | 45.0% |
| TCTGCAACTTGGAATCCAGT+TGG | + | tig0017613:20440-20459 | None:intergenic | 45.0% | |
| !! | GATGGGACTTACTGGTTCAA+TGG | + | tig0017613:20611-20630 | None:intergenic | 45.0% |
| TGAGATACGATGGGACTTAC+TGG | + | tig0017613:20619-20638 | None:intergenic | 45.0% | |
| GGTGAGACTTATTGATCCAG+TGG | - | tig0017613:20650-20669 | Msa1361760:intron | 45.0% | |
| GAGACTTATTGATCCAGTGG+TGG | - | tig0017613:20653-20672 | Msa1361760:intron | 45.0% | |
| ! | TTTTGTTCACTGTGGGGACT+GGG | - | tig0017613:20745-20764 | Msa1361760:intron | 45.0% |
| TGGGTTATTCTAAGTGCACC+AGG | - | tig0017613:20764-20783 | Msa1361760:intron | 45.0% | |
| TGTGCTATCTGCTATATGCC+TGG | + | tig0017613:20785-20804 | None:intergenic | 45.0% | |
| ! | CACTGGTTGACACAAATGGT+TGG | - | tig0017613:20941-20960 | Msa1361760:intron | 45.0% |
| TCCGAAATCTCCTTGTTGGT+AGG | - | tig0017613:21000-21019 | Msa1361760:intron | 45.0% | |
| GCCTACCAACAAGGAGATTT+CGG | + | tig0017613:21004-21023 | None:intergenic | 45.0% | |
| ! | AATCTCCTTGTTGGTAGGCT+AGG | - | tig0017613:21005-21024 | Msa1361760:intron | 45.0% |
| AATAGCCTAGCCTACCAACA+AGG | + | tig0017613:21013-21032 | None:intergenic | 45.0% | |
| GTCAATCCTCACTGAGGTTA+TGG | - | tig0017613:21046-21065 | Msa1361760:intron | 45.0% | |
| ACACTTCCATAACCTCAGTG+AGG | + | tig0017613:21055-21074 | None:intergenic | 45.0% | |
| ATAATAGCGTCCAGCCAACT+TGG | - | tig0017613:21278-21297 | Msa1361760:intron | 45.0% | |
| TCTCCTCTGAACATCCAAGT+TGG | + | tig0017613:21295-21314 | None:intergenic | 45.0% | |
| TCTATTTGGATCTCAGGGAG+AGG | - | tig0017613:21522-21541 | Msa1361760:intron | 45.0% | |
| CTATTTGGATCTCAGGGAGA+GGG | - | tig0017613:21523-21542 | Msa1361760:intron | 45.0% | |
| CTCTCCTCTTTCACACACAA+TGG | - | tig0017613:21622-21641 | Msa1361760:CDS | 45.0% | |
| CTTTGTGAACTACCATGCCA+TGG | - | tig0017613:21904-21923 | Msa1361760:intron | 45.0% | |
| AACTCATACACACCATGGCA+TGG | + | tig0017613:21919-21938 | None:intergenic | 45.0% | |
| TGCTGAACTCATACACACCA+TGG | + | tig0017613:21924-21943 | None:intergenic | 45.0% | |
| TGCGAAAGTGATATGCAGGT+TGG | - | tig0017613:22098-22117 | Msa1361760:intron | 45.0% | |
| ACAAGCGAAAAGCCAGAGAA+GGG | + | tig0017613:22245-22264 | None:intergenic | 45.0% | |
| AACAAGCGAAAAGCCAGAGA+AGG | + | tig0017613:22246-22265 | None:intergenic | 45.0% | |
| TGCTAATGCATGTCGTCTTG+AGG | - | tig0017613:22366-22385 | Msa1361760:intron | 45.0% | |
| TACATCCCATCAGGACTGTA+TGG | + | tig0017613:22520-22539 | None:intergenic | 45.0% | |
| AACGTCTTGTACATCCCATC+AGG | + | tig0017613:22529-22548 | None:intergenic | 45.0% | |
| GGGATGTACAAGACGTTAAG+AGG | - | tig0017613:22532-22551 | Msa1361760:intron | 45.0% | |
| !! | ACCTGAATAGCACCGATGAA+GGG | + | tig0017613:22579-22598 | None:intergenic | 45.0% |
| !! | TACCTGAATAGCACCGATGA+AGG | + | tig0017613:22580-22599 | None:intergenic | 45.0% |
| ! | TGCTGTAGCTTGTAGAAGTG+AGG | + | tig0017613:22955-22974 | None:intergenic | 45.0% |
| !! | TATCTATAAAATTTATAAAA+AGG | - | tig0017613:14289-14308 | Msa1361760:intron | 5.0% |
| !! | ATCTATAAAATTTATAAAAA+GGG | - | tig0017613:14290-14309 | Msa1361760:intron | 5.0% |
| !!! | AAGTTTATTTATTTTATTTT+TGG | + | tig0017613:15156-15175 | None:intergenic | 5.0% |
| !!! | GAAATTTAATTTAAATAATA+CGG | + | tig0017613:17966-17985 | None:intergenic | 5.0% |
| !! | AAAAATAAAAATATATAAAG+AGG | + | tig0017613:18167-18186 | None:intergenic | 5.0% |
| AACAGAGAAACCCGAAGCAC+AGG | - | tig0017613:12637-12656 | Msa1361760:three_prime_UTR | 50.0% | |
| TCGTCAACTACCTGTGCTTC+GGG | + | tig0017613:12650-12669 | None:intergenic | 50.0% | |
| GTCGTCAACTACCTGTGCTT+CGG | + | tig0017613:12651-12670 | None:intergenic | 50.0% | |
| CAGGTAGTTGACGACGAAGA+AGG | - | tig0017613:12656-12675 | Msa1361760:three_prime_UTR | 50.0% | |
| GTAGTTGACGACGAAGAAGG+CGG | - | tig0017613:12659-12678 | Msa1361760:three_prime_UTR | 50.0% | |
| GCGTTGCGGTATTTGTAGAC+AGG | + | tig0017613:12770-12789 | None:intergenic | 50.0% | |
| CCAAGTAGAGAATGGCGTTG+CGG | + | tig0017613:12784-12803 | None:intergenic | 50.0% | |
| !! | TTCGCCGACAATGATAGTGG+TGG | + | tig0017613:12819-12838 | None:intergenic | 50.0% |
| GGTTTCGCCGACAATGATAG+TGG | + | tig0017613:12822-12841 | None:intergenic | 50.0% | |
| !! | TTGAGTGGTTTTGCCGCTAC+CGG | + | tig0017613:12843-12862 | None:intergenic | 50.0% |
| ACAAGCAATGAGTCGTCCAC+CGG | + | tig0017613:12986-13005 | None:intergenic | 50.0% | |
| GATTGGACGAAAACCTTGGG+CGG | + | tig0017613:14206-14225 | None:intergenic | 50.0% | |
| ! | AAGGTCACGGGTTCAAGTTC+TGG | + | tig0017613:14422-14441 | None:intergenic | 50.0% |
| TCATGTGACCGAAAGGTCAC+GGG | + | tig0017613:14434-14453 | None:intergenic | 50.0% | |
| GTCATGTGACCGAAAGGTCA+CGG | + | tig0017613:14435-14454 | None:intergenic | 50.0% | |
| TAGATAGCGAGGGGTAACCT+TGG | + | tig0017613:14477-14496 | None:intergenic | 50.0% | |
| TCAGTGCAATGCCTTTGGAC+TGG | + | tig0017613:14632-14651 | None:intergenic | 50.0% | |
| GCTATGGTGCACAAGCTAGA+TGG | - | tig0017613:14726-14745 | Msa1361760:intron | 50.0% | |
| TGTGTCTCAGTAGCCAACAG+TGG | + | tig0017613:14887-14906 | None:intergenic | 50.0% | |
| GTTGGCTACTGAGACACAAC+TGG | - | tig0017613:14889-14908 | Msa1361760:intron | 50.0% | |
| GGAGTAAGAATACAAGGGGG+AGG | + | tig0017613:14939-14958 | None:intergenic | 50.0% | |
| CACTAAAGCTCCCACATACG+CGG | - | tig0017613:15239-15258 | Msa1361760:intron | 50.0% | |
| ACTAAAGCTCCCACATACGC+GGG | - | tig0017613:15240-15259 | Msa1361760:intron | 50.0% | |
| TCACCTGACTGAAAGGTCAC+GGG | + | tig0017613:15350-15369 | None:intergenic | 50.0% | |
| GTCACCTGACTGAAAGGTCA+CGG | + | tig0017613:15351-15370 | None:intergenic | 50.0% | |
| !! | GGTGTTGTTGAGGTTGGAGA+AGG | - | tig0017613:15759-15778 | Msa1361760:intron | 50.0% |
| TTCTCTACAGTTCCAGCCCA+TGG | - | tig0017613:16536-16555 | Msa1361760:intron | 50.0% | |
| TCCAGCCCATGGTTATTCCA+AGG | - | tig0017613:16547-16566 | Msa1361760:intron | 50.0% | |
| CCAGCCCATGGTTATTCCAA+GGG | - | tig0017613:16548-16567 | Msa1361760:intron | 50.0% | |
| CAGCCCATGGTTATTCCAAG+GGG | - | tig0017613:16549-16568 | Msa1361760:intron | 50.0% | |
| AGCCCATGGTTATTCCAAGG+GGG | - | tig0017613:16550-16569 | Msa1361760:intron | 50.0% | |
| ! | GCCTGAACATAGTCTTGGAC+AGG | + | tig0017613:16873-16892 | None:intergenic | 50.0% |
| CAGCAGCCTGAACATAGTCT+TGG | + | tig0017613:16878-16897 | None:intergenic | 50.0% | |
| GAAGGCAAATTACCCGCTCA+TGG | + | tig0017613:16920-16939 | None:intergenic | 50.0% | |
| TTCTAACCTGGTCAGCACGT+GGG | + | tig0017613:17911-17930 | None:intergenic | 50.0% | |
| TTTCTAACCTGGTCAGCACG+TGG | + | tig0017613:17912-17931 | None:intergenic | 50.0% | |
| CTCCAACTCCTAGAGGAAAG+AGG | - | tig0017613:18044-18063 | Msa1361760:intron | 50.0% | |
| GCTTCTGCTAGACAAAGAGC+TGG | - | tig0017613:18856-18875 | Msa1361760:intron | 50.0% | |
| CTGCTAGACAAAGAGCTGGT+AGG | - | tig0017613:18860-18879 | Msa1361760:intron | 50.0% | |
| TTGTGCACATGACTGCAACC+AGG | - | tig0017613:19629-19648 | Msa1361760:intron | 50.0% | |
| TACAAGTCGAAGCATGCGAC+CGG | + | tig0017613:19842-19861 | None:intergenic | 50.0% | |
| CGATCCCCAAAGCCTTTAAC+TGG | + | tig0017613:20304-20323 | None:intergenic | 50.0% | |
| CGGATCATTGCTTCAGGTGA+TGG | + | tig0017613:20359-20378 | None:intergenic | 50.0% | |
| TCTCTACTCCCTTGGGATCT+TGG | - | tig0017613:20391-20410 | Msa1361760:intron | 50.0% | |
| CATCATCGTCCAAGATCCCA+AGG | + | tig0017613:20403-20422 | None:intergenic | 50.0% | |
| GCCAAGCTTACTTCACCAAC+TGG | - | tig0017613:20422-20441 | Msa1361760:intron | 50.0% | |
| !! | GTTTTGTTCACTGTGGGGAC+TGG | - | tig0017613:20744-20763 | Msa1361760:intron | 50.0% |
| GTTGGACCTTCTACTCACAC+TGG | - | tig0017613:20959-20978 | Msa1361760:intron | 50.0% | |
| GGTCCATCCTTTGCTCATTC+CGG | - | tig0017613:21170-21189 | Msa1361760:intron | 50.0% | |
| !! | TAGAGCACCGGAATGAGCAA+AGG | + | tig0017613:21180-21199 | None:intergenic | 50.0% |
| ! | CTCTGAACATCCAAGTTGGC+TGG | + | tig0017613:21291-21310 | None:intergenic | 50.0% |
| CAGCCAACTTGGATGTTCAG+AGG | - | tig0017613:21289-21308 | Msa1361760:intron | 50.0% | |
| CTCAGGGAGAGGGATACAAA+AGG | - | tig0017613:21533-21552 | Msa1361760:intron | 50.0% | |
| !! | ATTGAGATTTGCTGCTGCCG+AGG | - | tig0017613:21572-21591 | Msa1361760:intron | 50.0% |
| !! | ACCCTTCATCGGTGCTATTC+AGG | - | tig0017613:22575-22594 | Msa1361760:intron | 50.0% |
| AGATCCCTCATGGCTATTGG+AGG | - | tig0017613:22924-22943 | Msa1361760:intron | 50.0% | |
| ATCTTCCCTGAGAGCGAGAG+AGG | - | tig0017613:12576-12595 | Msa1361760:three_prime_UTR | 55.0% | |
| CGTTACCTCTCTCGCTCTCA+GGG | + | tig0017613:12584-12603 | None:intergenic | 55.0% | |
| TCGTTACCTCTCTCGCTCTC+AGG | + | tig0017613:12585-12604 | None:intergenic | 55.0% | |
| ! | ATGGCGCAATTCTGGAAGCC+AGG | - | tig0017613:12614-12633 | Msa1361760:three_prime_UTR | 55.0% |
| ! | GCTTCGGGTTTCTCTGTTCC+TGG | + | tig0017613:12635-12654 | None:intergenic | 55.0% |
| GATGCTGGCGTAGCCATATC+CGG | + | tig0017613:12726-12745 | None:intergenic | 55.0% | |
| CCGCAACGCCATTCTCTACT+TGG | - | tig0017613:12781-12800 | Msa1361760:three_prime_UTR | 55.0% | |
| ATTGTCGGCGAAACCGGTAG+CGG | - | tig0017613:12827-12846 | Msa1361760:exon | 55.0% | |
| ACCAAGACGACTCGCTGTTC+AGG | - | tig0017613:13011-13030 | Msa1361760:intron | 55.0% | |
| CAATAGAGTTGGGCGTGAGG+GGG | + | tig0017613:13348-13367 | None:intergenic | 55.0% | |
| CCAATAGAGTTGGGCGTGAG+GGG | + | tig0017613:13349-13368 | None:intergenic | 55.0% | |
| CCCAATAGAGTTGGGCGTGA+GGG | + | tig0017613:13350-13369 | None:intergenic | 55.0% | |
| CCCTCACGCCCAACTCTATT+GGG | - | tig0017613:13347-13366 | Msa1361760:intron | 55.0% | |
| ACGCCCAACTCTATTGGGCT+TGG | - | tig0017613:13352-13371 | Msa1361760:intron | 55.0% | |
| ! | TGGCTGATTTCTTCCGCCCA+AGG | - | tig0017613:14190-14209 | Msa1361760:intron | 55.0% |
| ACTGAAGCTCCCGCATATGC+AGG | - | tig0017613:14324-14343 | Msa1361760:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | tig0017613:14325-14344 | Msa1361760:intron | 55.0% | |
| ! | AGGGGTAACCTTGGTGCAAC+TGG | + | tig0017613:14468-14487 | None:intergenic | 55.0% |
| CCAACAGTGGAGGTGGAAGT+GGG | + | tig0017613:14874-14893 | None:intergenic | 55.0% | |
| TCAGTAGCCAACAGTGGAGG+TGG | + | tig0017613:14881-14900 | None:intergenic | 55.0% | |
| GTCTCAGTAGCCAACAGTGG+AGG | + | tig0017613:14884-14903 | None:intergenic | 55.0% | |
| AATACAAGGGGGAGGGGAGA+AGG | + | tig0017613:14931-14950 | None:intergenic | 55.0% | |
| ! | TGTGGGAGCTTTAGTGCACC+AGG | + | tig0017613:15235-15254 | None:intergenic | 55.0% |
| CTAAAGCTCCCACATACGCG+GGG | - | tig0017613:15241-15260 | Msa1361760:intron | 55.0% | |
| TAATTGGTGGGACCCCTTCC+CGG | + | tig0017613:15268-15287 | None:intergenic | 55.0% | |
| AAGGTCACGGGTGCAAGTCT+TGG | + | tig0017613:15338-15357 | None:intergenic | 55.0% | |
| TAATGGAAGAGGGGGAGCCT+TGG | + | tig0017613:15392-15411 | None:intergenic | 55.0% | |
| ! | GGTGTTGTCGAGGTTGGAGA+AGG | - | tig0017613:15543-15562 | Msa1361760:intron | 55.0% |
| ! | GGTGTTGTCGAGGTTGGAGA+AGG | - | tig0017613:15543-15562 | Msa1361760:intron | 55.0% |
| GCGGCGAGAACCTGAAAATG+AGG | - | tig0017613:16364-16383 | Msa1361760:intron | 55.0% | |
| CCCTTGGAATAACCATGGGC+TGG | + | tig0017613:16551-16570 | None:intergenic | 55.0% | |
| AGACAAAGAGCTGGTAGGGC+TGG | - | tig0017613:18865-18884 | Msa1361760:intron | 55.0% | |
| !! | GCTTCAGGTGATGGAGATGC+TGG | + | tig0017613:20350-20369 | None:intergenic | 55.0% |
| GCACCGGAATGAGCAAAGGA+TGG | + | tig0017613:21176-21195 | None:intergenic | 55.0% | |
| ! | TGCTGCTGCCGAGGTACTTT+AGG | - | tig0017613:21581-21600 | Msa1361760:intron | 55.0% |
| TGCCAAACCTTGGATGGACG+AGG | - | tig0017613:22783-22802 | Msa1361760:CDS | 55.0% | |
| GCCAAACCTTGGATGGACGA+GGG | - | tig0017613:22784-22803 | Msa1361760:CDS | 55.0% | |
| ACCCTCGTCCATCCAAGGTT+TGG | + | tig0017613:22788-22807 | None:intergenic | 55.0% | |
| GCAGCCTCCAATAGCCATGA+GGG | + | tig0017613:22931-22950 | None:intergenic | 55.0% | |
| AGCAGCCTCCAATAGCCATG+AGG | + | tig0017613:22932-22951 | None:intergenic | 55.0% | |
| ! | ATTGAGGCTGGTTGGGCTGC+CGG | - | tig0017613:12964-12983 | Msa1361760:intron | 60.0% |
| GCCTGAACAGCGAGTCGTCT+TGG | + | tig0017613:13015-13034 | None:intergenic | 60.0% | |
| ! | TTGGGCGTGAGGGGGTGTAT+TGG | + | tig0017613:13340-13359 | None:intergenic | 60.0% |
| CCCCTCACGCCCAACTCTAT+TGG | - | tig0017613:13346-13365 | Msa1361760:intron | 60.0% | |
| GCCCAATAGAGTTGGGCGTG+AGG | + | tig0017613:13351-13370 | None:intergenic | 60.0% | |
| ! | TTACCGATGGGGTGCTCCTG+AGG | - | tig0017613:13775-13794 | Msa1361760:CDS | 60.0% |
| ! | TACCGATGGGGTGCTCCTGA+GGG | - | tig0017613:13776-13795 | Msa1361760:CDS | 60.0% |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | tig0017613:14320-14339 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | tig0017613:14336-14355 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | tig0017613:14337-14356 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | tig0017613:14336-14355 | Msa1361760:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | tig0017613:14337-14356 | Msa1361760:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | tig0017613:14352-14371 | None:intergenic | 60.0% |
| CCCACTTCCACCTCCACTGT+TGG | - | tig0017613:14871-14890 | Msa1361760:intron | 60.0% | |
| GCCAACAGTGGAGGTGGAAG+TGG | + | tig0017613:14875-14894 | None:intergenic | 60.0% | |
| GCACCCGTGACCTTTCAGTC+AGG | - | tig0017613:15344-15363 | Msa1361760:intron | 60.0% | |
| CGTGGGAGCCCTGAATAGAG+AGG | + | tig0017613:17894-17913 | None:intergenic | 60.0% | |
| CGGCACTGCATTCCCTTCTC+TGG | - | tig0017613:22230-22249 | Msa1361760:intron | 60.0% | |
| GCTGGCGTAGCCATATCCGG+AGG | + | tig0017613:12723-12742 | None:intergenic | 65.0% | |
| !! | CTCCCTCAGGAGCACCCCAT+CGG | + | tig0017613:13781-13800 | None:intergenic | 65.0% |
| TGCGGGAGCTTCAGTGCACC+GGG | + | tig0017613:14319-14338 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | tig0017613:14330-14349 | Msa1361760:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | tig0017613:14331-14350 | Msa1361760:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | tig0017613:14335-14354 | Msa1361760:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | tig0017613:14350-14369 | Msa1361760:intron | 65.0% | |
| TTCCCGGACCCCGCGTATGT+GGG | + | tig0017613:15252-15271 | None:intergenic | 65.0% | |
| ACATACGCGGGGTCCGGGAA+GGG | - | tig0017613:15252-15271 | Msa1361760:intron | 65.0% | |
| AGGGCTGGACGAGTTCGACC+AGG | - | tig0017613:18880-18899 | Msa1361760:intron | 65.0% | |
| CAGCGACCCTCGTCCATCCA+AGG | + | tig0017613:22793-22812 | None:intergenic | 65.0% | |
| GCTCCCACATACGCGGGGTC+CGG | - | tig0017613:15246-15265 | Msa1361760:intron | 70.0% | |
| CTCCCACATACGCGGGGTCC+GGG | - | tig0017613:15247-15266 | Msa1361760:intron | 70.0% | |
| CTTCCCGGACCCCGCGTATG+TGG | + | tig0017613:15253-15272 | None:intergenic | 70.0% | |
| CACATACGCGGGGTCCGGGA+AGG | - | tig0017613:15251-15270 | Msa1361760:intron | 70.0% | |
| CATACGCGGGGTCCGGGAAG+GGG | - | tig0017613:15253-15272 | Msa1361760:intron | 70.0% | |
| ! | AGGGCTCCCACGTGCTGACC+AGG | - | tig0017613:17902-17921 | Msa1361760:CDS | 70.0% |
| ! | GAGGCTGGTTGGGCTGCCGG+TGG | - | tig0017613:12967-12986 | Msa1361760:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017613 | gene | 12502 | 23323 | 12502 | ID=Msa1361760;Name=Msa1361760 |
| tig0017613 | mRNA | 12502 | 23323 | 12502 | ID=Msa1361760-mRNA-1;Parent=Msa1361760;Name=Msa1361760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=92|0.90|0.86|1|0.85|0.81|22|330|672 |
| tig0017613 | exon | 12502 | 12976 | 12502 | ID=Msa1361760-mRNA-1:exon:12638;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 13229 | 13308 | 13229 | ID=Msa1361760-mRNA-1:exon:12637;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 13438 | 13491 | 13438 | ID=Msa1361760-mRNA-1:exon:12636;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 13710 | 13796 | 13710 | ID=Msa1361760-mRNA-1:exon:12635;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 13900 | 13998 | 13900 | ID=Msa1361760-mRNA-1:exon:12634;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 14232 | 14303 | 14232 | ID=Msa1361760-mRNA-1:exon:12633;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 14479 | 14568 | 14479 | ID=Msa1361760-mRNA-1:exon:12632;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 15356 | 15474 | 15356 | ID=Msa1361760-mRNA-1:exon:12631;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 16080 | 16174 | 16080 | ID=Msa1361760-mRNA-1:exon:12630;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 16911 | 17011 | 16911 | ID=Msa1361760-mRNA-1:exon:12629;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 17573 | 17626 | 17573 | ID=Msa1361760-mRNA-1:exon:12628;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 17711 | 17794 | 17711 | ID=Msa1361760-mRNA-1:exon:12627;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 17902 | 17948 | 17902 | ID=Msa1361760-mRNA-1:exon:12626;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 18150 | 18255 | 18150 | ID=Msa1361760-mRNA-1:exon:12625;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 18899 | 18994 | 18899 | ID=Msa1361760-mRNA-1:exon:12624;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 19398 | 19467 | 19398 | ID=Msa1361760-mRNA-1:exon:12623;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 21614 | 21699 | 21614 | ID=Msa1361760-mRNA-1:exon:12622;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 21807 | 21876 | 21807 | ID=Msa1361760-mRNA-1:exon:12621;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 21993 | 22072 | 21993 | ID=Msa1361760-mRNA-1:exon:12620;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 22742 | 22867 | 22742 | ID=Msa1361760-mRNA-1:exon:12619;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 22954 | 23239 | 22954 | ID=Msa1361760-mRNA-1:exon:12618;Parent=Msa1361760-mRNA-1 |
| tig0017613 | exon | 23260 | 23323 | 23260 | ID=Msa1361760-mRNA-1:exon:12617;Parent=Msa1361760-mRNA-1 |
| tig0017613 | five_prime_UTR | 23260 | 23323 | 23260 | ID=Msa1361760-mRNA-1:five_prime_utr;Parent=Msa1361760-mRNA-1 |
| tig0017613 | five_prime_UTR | 23212 | 23239 | 23212 | ID=Msa1361760-mRNA-1:five_prime_utr;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 22954 | 23211 | 22954 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 22742 | 22867 | 22742 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 21993 | 22072 | 21993 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 21807 | 21876 | 21807 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 21614 | 21699 | 21614 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 19398 | 19467 | 19398 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 18899 | 18994 | 18899 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 18150 | 18255 | 18150 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 17902 | 17948 | 17902 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 17711 | 17794 | 17711 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 17573 | 17626 | 17573 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 16911 | 17011 | 16911 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 16080 | 16174 | 16080 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 15356 | 15474 | 15356 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 14479 | 14568 | 14479 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 14232 | 14303 | 14232 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 13900 | 13998 | 13900 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 13710 | 13796 | 13710 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 13438 | 13491 | 13438 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 13229 | 13308 | 13229 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | CDS | 12832 | 12976 | 12832 | ID=Msa1361760-mRNA-1:cds;Parent=Msa1361760-mRNA-1 |
| tig0017613 | three_prime_UTR | 12502 | 12831 | 12502 | ID=Msa1361760-mRNA-1:three_prime_utr;Parent=Msa1361760-mRNA-1 |
| Gene Sequence |
| Protein sequence |