Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361900 | XP_003625970.1 | 96.622 | 740 | 24 | 1 | 1 | 740 | 1 | 739 | 0.0 | 1477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361900 | sp|Q8VZF3|CGEP_ARATH | 74.668 | 754 | 171 | 6 | 1 | 741 | 1 | 747 | 0.0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361900 | G7KST7 | 96.622 | 740 | 24 | 1 | 1 | 740 | 1 | 739 | 0.0 | 1477 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1082390 | Msa1361900 | 0.867009 | 1.876533e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361900 | MtrunA17_Chr7g0269971 | 96.622 | 740 | 24 | 1 | 1 | 740 | 1 | 739 | 0.0 | 1477 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361900 | AT2G47390.1 | 74.801 | 754 | 171 | 5 | 1 | 741 | 1 | 748 | 0.0 | 1157 |
Find 223 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTGAGTTTCAAATATT+TGG | 0.145695 | tig0017690:-388 | Msa1361900:three_prime_UTR |
| GATGGTACTACAAAGGATTT+TGG | 0.176444 | tig0017690:-2920 | Msa1361900:CDS |
| CGCACACTATTGGATGTAAT+TGG | 0.187206 | tig0017690:+2713 | None:intergenic |
| CTCCATAACTCTACCTTCTT+TGG | 0.204039 | tig0017690:+2791 | None:intergenic |
| GCTATTAAGCCTATTAATTA+TGG | 0.223515 | tig0017690:+297 | None:intergenic |
| GCCAACTAATAAAATTATAT+TGG | 0.224218 | tig0017690:+1012 | None:intergenic |
| ATGTCATTCTACACAGGTTT+AGG | 0.225078 | tig0017690:-3409 | Msa1361900:CDS |
| AAGGGATGCGTTCTATTAAT+TGG | 0.232507 | tig0017690:-2688 | Msa1361900:CDS |
| CCCTTCTTTGGCTGGCTAAA+AGG | 0.247608 | tig0017690:-725 | Msa1361900:intron |
| ATGTTAGATGATTCAGCTTT+AGG | 0.249725 | tig0017690:-3631 | Msa1361900:intron |
| CCAGGAACCAAAGGTTTCTT+TGG | 0.255796 | tig0017690:+3076 | None:intergenic |
| AAATTTATCTTCGCACCTTC+AGG | 0.267105 | tig0017690:+3328 | None:intergenic |
| CATCCCTTTCCGCACACTAT+TGG | 0.287295 | tig0017690:+2703 | None:intergenic |
| GTTCCACGTCAGCCCTTCTT+TGG | 0.290086 | tig0017690:-737 | Msa1361900:CDS |
| AGATGGTCCTTTGCCATGTT+TGG | 0.293337 | tig0017690:-841 | Msa1361900:CDS |
| CCAAAGAAACCTTTGGTTCC+TGG | 0.299895 | tig0017690:-3076 | Msa1361900:CDS |
| ATACTAGCAAACTCAGAGTA+TGG | 0.302841 | tig0017690:-3240 | Msa1361900:CDS |
| AATCATACTCCATAATTAAT+AGG | 0.304144 | tig0017690:-306 | Msa1361900:three_prime_UTR |
| GGCTCTCCAAATGAATTTGC+AGG | 0.321351 | tig0017690:-765 | Msa1361900:CDS |
| ATAAGCCATCAACGCTTTAC+TGG | 0.328861 | tig0017690:-2658 | Msa1361900:intron |
| GTATATACAGAGGAATTTCT+TGG | 0.338627 | tig0017690:-1557 | Msa1361900:intron |
| CCGATCCCTGCAAATTCATT+TGG | 0.345807 | tig0017690:+759 | None:intergenic |
| CACGTCAGCCCTTCTTTGGC+TGG | 0.352807 | tig0017690:-733 | Msa1361900:CDS |
| AAGGAGATTTACAGTTAGAT+AGG | 0.354368 | tig0017690:-1076 | Msa1361900:CDS |
| TGTCATTCTACACAGGTTTA+GGG | 0.359434 | tig0017690:-3408 | Msa1361900:CDS |
| TGTTCCTCCACCTGAGATTA+GGG | 0.366278 | tig0017690:-3596 | Msa1361900:CDS |
| CAGGTAGTAAGGAACGAATC+TGG | 0.368966 | tig0017690:-1157 | Msa1361900:CDS |
| GTGTTCCTCCACCTGAGATT+AGG | 0.373890 | tig0017690:-3597 | Msa1361900:CDS |
| TGCAGGTTTGCAATCCTATC+TGG | 0.374422 | tig0017690:-569 | Msa1361900:intron |
| GTCCTTTGCCATGTTTGGTT+TGG | 0.378878 | tig0017690:-836 | Msa1361900:CDS |
| GGCCCAACCATTCCTATTAT+CGG | 0.383067 | tig0017690:-548 | Msa1361900:CDS |
| CCAACTAATAAAATTATATT+GGG | 0.389207 | tig0017690:+1013 | None:intergenic |
| CAGCAGTGAGAGGTGCTAAA+TGG | 0.390176 | tig0017690:+4397 | None:intergenic |
| ATCATAATGTACTTCTCATC+TGG | 0.396199 | tig0017690:+2863 | None:intergenic |
| AGGAATGGAACGTTCCCTTC+TGG | 0.397491 | tig0017690:+1285 | None:intergenic |
| TATTCAAGTAAGAACATTCC+AGG | 0.401088 | tig0017690:-3017 | Msa1361900:CDS |
| CAAGGTACAATAAAAGAGTA+TGG | 0.402576 | tig0017690:+2824 | None:intergenic |
| GGTGGAGCTCCACGAGTTGA+TGG | 0.405378 | tig0017690:+3097 | None:intergenic |
| TTCTTGGTGTGATGATTCAC+TGG | 0.405757 | tig0017690:-1541 | Msa1361900:CDS |
| GGTGGACATGGAGGCGAAGT+TGG | 0.411211 | tig0017690:+4431 | None:intergenic |
| TGGGTTGCAGATGTGAAAAC+AGG | 0.413872 | tig0017690:-3220 | Msa1361900:CDS |
| CTGCCACAGGTGCAAAACTT+AGG | 0.416895 | tig0017690:+235 | None:intergenic |
| CTATACCAGTAAAGCGTTGA+TGG | 0.417274 | tig0017690:+2653 | None:intergenic |
| AAGGATAAATGCCGAGCATC+AGG | 0.417827 | tig0017690:+3292 | None:intergenic |
| TTGGCTGGTTTACGTGTTGA+TGG | 0.419115 | tig0017690:-3454 | Msa1361900:CDS |
| TGAGGCTTAGGTTTCTTCTT+CGG | 0.420974 | tig0017690:-351 | Msa1361900:three_prime_UTR |
| TTCCAAAGAAGGTAGAGTTA+TGG | 0.426707 | tig0017690:-2793 | Msa1361900:CDS |
| TGCCACAGGTGCAAAACTTA+GGG | 0.426891 | tig0017690:+236 | None:intergenic |
| CCAAAATGTTGCAGAAATAC+AGG | 0.431225 | tig0017690:-1176 | Msa1361900:intron |
| GTGAAGTAGAGGCTAATGAT+AGG | 0.437329 | tig0017690:-520 | Msa1361900:CDS |
| GTGCCGATGGAAAATTTGTC+AGG | 0.439578 | tig0017690:-2769 | Msa1361900:CDS |
| GATGATTCAGCTTTAGGAGT+AGG | 0.439917 | tig0017690:-3625 | Msa1361900:CDS |
| TCTTTGCTCTTAAATTCTCC+AGG | 0.440008 | tig0017690:+807 | None:intergenic |
| CATTGCAGAAAGAGATGATC+AGG | 0.442100 | tig0017690:-932 | Msa1361900:CDS |
| CATCCAATAGTGTGCGGAAA+GGG | 0.446479 | tig0017690:-2706 | Msa1361900:CDS |
| GGATGTAATTGGAATGTCTT+CGG | 0.447416 | tig0017690:+2724 | None:intergenic |
| TAGGAATGGTTGGGCCAGAT+AGG | 0.452751 | tig0017690:+555 | None:intergenic |
| TCCAGCTGTTTATACCTCTC+TGG | 0.453194 | tig0017690:-2894 | Msa1361900:CDS |
| ATGATTCAGCTTTAGGAGTA+GGG | 0.458381 | tig0017690:-3624 | Msa1361900:CDS |
| ATTATTGCAAAGATAAAGAA+AGG | 0.459801 | tig0017690:-1354 | Msa1361900:CDS |
| TTACTTGGTCTCCTGATGCT+CGG | 0.460788 | tig0017690:-3303 | Msa1361900:CDS |
| CTCCGCAGCATGGGAGAGCC+AGG | 0.464233 | tig0017690:+1396 | None:intergenic |
| GGAAGAAGAGAAGGGTTGGA+AGG | 0.465107 | tig0017690:+4498 | None:intergenic |
| AGAACATGGGTAGTCTCTCC+TGG | 0.466637 | tig0017690:-1480 | Msa1361900:CDS |
| GCGAAAGCGGGAGGTGGACA+TGG | 0.468667 | tig0017690:+4419 | None:intergenic |
| AGCTCCACCAAAGAAACCTT+TGG | 0.469543 | tig0017690:-3083 | Msa1361900:CDS |
| AATTTATCTTCGCACCTTCA+GGG | 0.471722 | tig0017690:+3329 | None:intergenic |
| TACCATCAGGAAGAATTTCA+TGG | 0.472908 | tig0017690:+3383 | None:intergenic |
| TTGCAGAAATACAGGTAGTA+AGG | 0.474978 | tig0017690:-1168 | Msa1361900:intron |
| CACAAGCTTGATCTTCGCTA+TGG | 0.475270 | tig0017690:-1888 | Msa1361900:CDS |
| CAACCTGCTGAAGCACTAGA+AGG | 0.477242 | tig0017690:-1930 | Msa1361900:CDS |
| GGAACCAAAGGTTTCTTTGG+TGG | 0.480140 | tig0017690:+3079 | None:intergenic |
| GAGAGGAAGAAGAGAAGGGT+TGG | 0.483248 | tig0017690:+4494 | None:intergenic |
| GAAGAAGAGAAGGGTTGGAA+GGG | 0.484033 | tig0017690:+4499 | None:intergenic |
| GGCAAAGGACCATCTGTTGA+TGG | 0.484226 | tig0017690:+849 | None:intergenic |
| GAGAAATGGGACTGAAGATA+AGG | 0.485132 | tig0017690:+414 | None:intergenic |
| GGAGTCACGTCTTCAGATCC+AGG | 0.487309 | tig0017690:+1462 | None:intergenic |
| ACTGCATTCAAATATACATC+AGG | 0.492336 | tig0017690:+3172 | None:intergenic |
| CATTTGGAGAGCCTCGAACT+TGG | 0.492581 | tig0017690:+775 | None:intergenic |
| GGAGCCGTTGACGGCTCCAC+CGG | 0.497877 | tig0017690:+4356 | None:intergenic |
| TCCAGAGAGGTATAAACAGC+TGG | 0.498640 | tig0017690:+2893 | None:intergenic |
| CGCCGATAATAGGAATGGTT+GGG | 0.499826 | tig0017690:+546 | None:intergenic |
| TTGTGGAAGATTTCCAAAGA+AGG | 0.500118 | tig0017690:-2804 | Msa1361900:CDS |
| GGAAGATATATCATACTGAA+TGG | 0.500785 | tig0017690:-1321 | Msa1361900:CDS |
| TCGCCGATAATAGGAATGGT+TGG | 0.501910 | tig0017690:+545 | None:intergenic |
| TCACCTTCTAGTGCTTCAGC+AGG | 0.501916 | tig0017690:+1927 | None:intergenic |
| ACATCAGGCGACTGAAACAA+AGG | 0.502417 | tig0017690:+3187 | None:intergenic |
| CCAAATGAATTTGCAGGGAT+CGG | 0.502710 | tig0017690:-759 | Msa1361900:CDS |
| CTTACATGTCAAACAGATCA+AGG | 0.506519 | tig0017690:+1265 | None:intergenic |
| GAAAATGACAATGCAGGAAC+TGG | 0.507346 | tig0017690:+3556 | None:intergenic |
| GAAAGTATCGGCGGTGGCGG+AGG | 0.507654 | tig0017690:+4326 | None:intergenic |
| AATTGGAATGTCTTCGGCAA+GGG | 0.512994 | tig0017690:+2730 | None:intergenic |
| GGGTTGGAAGGGAACGATGA+TGG | 0.513085 | tig0017690:+4510 | None:intergenic |
| ATTCATCCTTCAGCAAATCC+TGG | 0.513530 | tig0017690:+2999 | None:intergenic |
| GGCGGTGGCGGAGGAAGAAA+CGG | 0.519648 | tig0017690:+4335 | None:intergenic |
| TGTTTGGTTTGGTCTTACCC+TGG | 0.521641 | tig0017690:-825 | Msa1361900:CDS |
| TTATTGCAAAGATAAAGAAA+GGG | 0.522628 | tig0017690:-1353 | Msa1361900:CDS |
| TCCACTGAAGACGGCGCCGG+TGG | 0.524227 | tig0017690:-4372 | Msa1361900:CDS |
| GAAGATGCATACTCTGATCC+TGG | 0.524865 | tig0017690:-1414 | Msa1361900:CDS |
| GGAGCGAGAGGAAGAAGAGA+AGG | 0.525317 | tig0017690:+4489 | None:intergenic |
| GGAAGAAACGGAGCCGTTGA+CGG | 0.527449 | tig0017690:+4347 | None:intergenic |
| GTCTCCACTGAAGACGGCGC+CGG | 0.530072 | tig0017690:-4375 | Msa1361900:CDS |
| ACGAATCTGGGAGAGTGATA+AGG | 0.530372 | tig0017690:-1144 | Msa1361900:CDS |
| GAGCGAGAGGAAGAAGAGAA+GGG | 0.533453 | tig0017690:+4490 | None:intergenic |
| ATCAGGTATCAAAGAAAAGA+CGG | 0.533863 | tig0017690:-915 | Msa1361900:CDS |
| ATGCTGCGGAGAACTCAAGC+TGG | 0.533979 | tig0017690:-1384 | Msa1361900:CDS |
| TAACCGTGTATCTCAACCTC+GGG | 0.534160 | tig0017690:+3352 | None:intergenic |
| AGGTAGTAAGGAACGAATCT+GGG | 0.534241 | tig0017690:-1156 | Msa1361900:CDS |
| AGCTTGAGTTCTCCGCAGCA+TGG | 0.535748 | tig0017690:+1386 | None:intergenic |
| AGCAAGGCCGGAGGAAAAGT+TGG | 0.536064 | tig0017690:-3473 | Msa1361900:CDS |
| GATGCTGCTAGCCAAGTTCG+AGG | 0.536673 | tig0017690:-786 | Msa1361900:CDS |
| GAAGATAAGGAGATTTCTCT+AGG | 0.536789 | tig0017690:+427 | None:intergenic |
| AGGCCGGAGGAAAAGTTGGC+TGG | 0.537462 | tig0017690:-3469 | Msa1361900:CDS |
| ATGTACTTCTCATCTGGAGA+AGG | 0.539513 | tig0017690:+2869 | None:intergenic |
| TCAGGTATCAAAGAAAAGAC+GGG | 0.540145 | tig0017690:-914 | Msa1361900:CDS |
| AGGAAACGCGGAGGAGCGAG+AGG | 0.540689 | tig0017690:+4477 | None:intergenic |
| TCAACGATGTCCCTAATCTC+AGG | 0.541316 | tig0017690:+3586 | None:intergenic |
| TTGATGGATACTGCAATTCA+AGG | 0.541814 | tig0017690:-3438 | Msa1361900:CDS |
| ATCCATGAAATTCTTCCTGA+TGG | 0.542749 | tig0017690:-3385 | Msa1361900:CDS |
| CTTCAGCATTCGTGTGAATG+AGG | 0.543585 | tig0017690:-3272 | Msa1361900:CDS |
| GTAGAAAGTATCGGCGGTGG+CGG | 0.543658 | tig0017690:+4323 | None:intergenic |
| GTCTGTTGTTGCTCTAATGT+CGG | 0.544230 | tig0017690:-1108 | Msa1361900:CDS |
| AGGTGCTAAATGGCGAAAGC+GGG | 0.548042 | tig0017690:+4407 | None:intergenic |
| GGCGCCGGTGGAGCCGTCAA+CGG | 0.553933 | tig0017690:-4360 | Msa1361900:CDS |
| GGAAGTGGTGCAACACCAGA+AGG | 0.554759 | tig0017690:-1300 | Msa1361900:CDS |
| CTCATTCACACGAATGCTGA+AGG | 0.555075 | tig0017690:+3273 | None:intergenic |
| AATGATGCAAGCTGAGGGTA+TGG | 0.556434 | tig0017690:+951 | None:intergenic |
| TGCTGCGGAGAACTCAAGCT+GGG | 0.556558 | tig0017690:-1383 | Msa1361900:CDS |
| CTTCTGAAGATCGATCGAAT+AGG | 0.557238 | tig0017690:+1433 | None:intergenic |
| TGCACCATTCCATCAACTCG+TGG | 0.559943 | tig0017690:-3106 | Msa1361900:CDS |
| ACTGACTGAATTAGCAAGGC+CGG | 0.560409 | tig0017690:-3485 | Msa1361900:CDS |
| ACCATTCCTATTATCGGCGA+GGG | 0.560652 | tig0017690:-542 | Msa1361900:CDS |
| TATATCATACTGAATGGAAG+TGG | 0.560960 | tig0017690:-1315 | Msa1361900:CDS |
| TCGGGTCCTAGTGTACCATC+AGG | 0.560994 | tig0017690:+3370 | None:intergenic |
| AGTTGGCAGCGGTTCTGCGA+CGG | 0.561939 | tig0017690:+4448 | None:intergenic |
| AGACGGAGGTGATGCAAAAG+TGG | 0.567125 | tig0017690:-1982 | Msa1361900:CDS |
| CATGGAGGCGAAGTTGGCAG+CGG | 0.568057 | tig0017690:+4437 | None:intergenic |
| AACATTCCAGGATTTGCTGA+AGG | 0.568306 | tig0017690:-3005 | Msa1361900:CDS |
| AATGGTGAAAATGACAATGC+AGG | 0.568762 | tig0017690:+3550 | None:intergenic |
| TACTAGCAAACTCAGAGTAT+GGG | 0.569662 | tig0017690:-3239 | Msa1361900:CDS |
| ACAAGCTTGATCTTCGCTAT+GGG | 0.571598 | tig0017690:-1887 | Msa1361900:intron |
| TTATGATTGATTCAATGCAT+AGG | 0.573141 | tig0017690:-2847 | Msa1361900:CDS |
| GCTTGAGTTCTCCGCAGCAT+GGG | 0.573335 | tig0017690:+1387 | None:intergenic |
| GCAAGCTGAGGGTATGGATG+AGG | 0.573988 | tig0017690:+957 | None:intergenic |
| CTAATGTCGGATCAAGAAGA+AGG | 0.574175 | tig0017690:-1095 | Msa1361900:CDS |
| CGGTTCTGCGACGGAGAGTG+AGG | 0.574207 | tig0017690:+4457 | None:intergenic |
| TTTGGCCCACCAGGAACCAA+AGG | 0.575186 | tig0017690:+3067 | None:intergenic |
| TCAAGCTTGTGTAATATCAC+CGG | 0.578428 | tig0017690:+1900 | None:intergenic |
| ATTCTTCCTGATGGTACACT+AGG | 0.579690 | tig0017690:-3376 | Msa1361900:CDS |
| CTTTGCTCTTAAATTCTCCA+GGG | 0.584326 | tig0017690:+808 | None:intergenic |
| TTCTGCAATGATGCAAGCTG+AGG | 0.585378 | tig0017690:+945 | None:intergenic |
| GGGTAAGACCAAACCAAACA+TGG | 0.586048 | tig0017690:+828 | None:intergenic |
| TCCACCGGCGCCGTCTTCAG+TGG | 0.590068 | tig0017690:+4371 | None:intergenic |
| ACATCCAATAGTGTGCGGAA+AGG | 0.590918 | tig0017690:-2707 | Msa1361900:CDS |
| AAACAAGGCGAATAAGAACA+TGG | 0.592184 | tig0017690:-1494 | Msa1361900:CDS |
| TAATTGGAATGTCTTCGGCA+AGG | 0.592215 | tig0017690:+2729 | None:intergenic |
| AGCACTAGAAGGTGAACAGC+CGG | 0.592501 | tig0017690:-1919 | Msa1361900:CDS |
| TGCTAAATGGCGAAAGCGGG+AGG | 0.593580 | tig0017690:+4410 | None:intergenic |
| TGTACTTCTCATCTGGAGAA+GGG | 0.596924 | tig0017690:+2870 | None:intergenic |
| AAGAAACCTTTGGTTCCTGG+TGG | 0.598314 | tig0017690:-3073 | Msa1361900:CDS |
| ATCCTGGCTCTCCCATGCTG+CGG | 0.599321 | tig0017690:-1398 | Msa1361900:CDS |
| TATCGGCGAGGGTGAAGTAG+AGG | 0.599867 | tig0017690:-531 | Msa1361900:CDS |
| CAAGCTGAGGGTATGGATGA+GGG | 0.601512 | tig0017690:+958 | None:intergenic |
| ATCTTTAGATGGTACTACAA+AGG | 0.605083 | tig0017690:-2927 | Msa1361900:CDS |
| ATTGGAATGTCTTCGGCAAG+GGG | 0.607891 | tig0017690:+2731 | None:intergenic |
| TAAATGGCGAAAGCGGGAGG+TGG | 0.609491 | tig0017690:+4413 | None:intergenic |
| CAGCCAAAGAAGGGCTGACG+TGG | 0.610071 | tig0017690:+734 | None:intergenic |
| GGCCTTGCTAATTCAGTCAG+TGG | 0.610175 | tig0017690:+3487 | None:intergenic |
| GGAGAGTGGAGCGATGCCGA+TGG | 0.610352 | tig0017690:+4547 | None:intergenic |
| ATGTCCCTAATCTCAGGTGG+AGG | 0.612231 | tig0017690:+3592 | None:intergenic |
| TTCGTAATCGTAGAAAGTAT+CGG | 0.612481 | tig0017690:+4314 | None:intergenic |
| GAGATACACGGTTACCCTGA+AGG | 0.612554 | tig0017690:-3343 | Msa1361900:CDS |
| ACCCTCGCCGATAATAGGAA+TGG | 0.613412 | tig0017690:+541 | None:intergenic |
| TTCTTTGGAAATCTTCCACA+AGG | 0.616835 | tig0017690:+2806 | None:intergenic |
| AGAAACCTTTGGTTCCTGGT+GGG | 0.619335 | tig0017690:-3072 | Msa1361900:CDS |
| AACCATTCCTATTATCGGCG+AGG | 0.620784 | tig0017690:-543 | Msa1361900:CDS |
| ATGTCAAACAGATCAAGGAA+TGG | 0.625170 | tig0017690:+1270 | None:intergenic |
| GTAGAGTTATGGAGTGCCGA+TGG | 0.625317 | tig0017690:-2782 | Msa1361900:CDS |
| AAAGCGGGAGGTGGACATGG+AGG | 0.626615 | tig0017690:+4422 | None:intergenic |
| CTCCACTGACTGAATTAGCA+AGG | 0.626819 | tig0017690:-3489 | Msa1361900:CDS |
| ATCGTAGAAAGTATCGGCGG+TGG | 0.627429 | tig0017690:+4320 | None:intergenic |
| TCTGCAATGATGCAAGCTGA+GGG | 0.627483 | tig0017690:+946 | None:intergenic |
| GCTCTCCAAATGAATTTGCA+GGG | 0.628844 | tig0017690:-764 | Msa1361900:CDS |
| GACCAAACCAAACATGGCAA+AGG | 0.629767 | tig0017690:+834 | None:intergenic |
| ACTGCTGTCTCCACTGAAGA+CGG | 0.630271 | tig0017690:-4381 | Msa1361900:CDS |
| TATTGCAAAGATAAAGAAAG+GGG | 0.630329 | tig0017690:-1352 | Msa1361900:CDS |
| TGCCGATGGAAAATTTGTCA+GGG | 0.632234 | tig0017690:-2768 | Msa1361900:CDS |
| AATGACAATGCAGGAACTGG+CGG | 0.634984 | tig0017690:+3559 | None:intergenic |
| ACGAATCTTGGTATAAAACA+AGG | 0.635100 | tig0017690:-1509 | Msa1361900:CDS |
| TCTGTTGATGGATTGTAACC+TGG | 0.635244 | tig0017690:+861 | None:intergenic |
| GAGGTGCTAAATGGCGAAAG+CGG | 0.635693 | tig0017690:+4406 | None:intergenic |
| GATCGATCGAATAGGATGCG+TGG | 0.639019 | tig0017690:+1441 | None:intergenic |
| AGTCGCATGTCATTCTACAC+AGG | 0.641450 | tig0017690:-3415 | Msa1361900:CDS |
| GCCACAGGTGCAAAACTTAG+GGG | 0.641611 | tig0017690:+237 | None:intergenic |
| TCAGTGGAGACAGCAGTGAG+AGG | 0.642945 | tig0017690:+4387 | None:intergenic |
| AGCTCCACGAGTTGATGGAA+TGG | 0.642993 | tig0017690:+3102 | None:intergenic |
| GATACTTTCTACGATTACGA+AGG | 0.643647 | tig0017690:-4312 | Msa1361900:intron |
| GGATACACAAACTATACCAT+CGG | 0.646424 | tig0017690:-4563 | Msa1361900:CDS |
| GAAGTGGTGCAACACCAGAA+GGG | 0.651059 | tig0017690:-1299 | Msa1361900:CDS |
| ACGATGTCCCTAATCTCAGG+TGG | 0.651459 | tig0017690:+3589 | None:intergenic |
| CGACGGAGAGTGAGGAAACG+CGG | 0.652672 | tig0017690:+4465 | None:intergenic |
| GGTTACAATCCATCAACAGA+TGG | 0.653997 | tig0017690:-858 | Msa1361900:CDS |
| GCTACATTATACTTGCCACC+AGG | 0.654717 | tig0017690:-879 | Msa1361900:CDS |
| CAGCATTCGTGTGAATGAGG+AGG | 0.655496 | tig0017690:-3269 | Msa1361900:CDS |
| AACAAGGCGAATAAGAACAT+GGG | 0.658049 | tig0017690:-1493 | Msa1361900:CDS |
| GGACCCGAGGTTGAGATACA+CGG | 0.659143 | tig0017690:-3355 | Msa1361900:CDS |
| CCACAGGTGCAAAACTTAGG+GGG | 0.663040 | tig0017690:+238 | None:intergenic |
| CAGGTATCAAAGAAAAGACG+GGG | 0.665680 | tig0017690:-913 | Msa1361900:CDS |
| CAATTACATCCAATAGTGTG+CGG | 0.671738 | tig0017690:-2712 | Msa1361900:CDS |
| AGAGAGGTATAAACAGCTGG+AGG | 0.671888 | tig0017690:+2896 | None:intergenic |
| TGATGGTACACTAGGACCCG+AGG | 0.674670 | tig0017690:-3368 | Msa1361900:CDS |
| CTTGCTAATTCAGTCAGTGG+AGG | 0.677968 | tig0017690:+3490 | None:intergenic |
| AGATGCTAAAACAAGCTGAG+AGG | 0.680936 | tig0017690:+2946 | None:intergenic |
| GACTGAATTAGCAAGGCCGG+AGG | 0.685598 | tig0017690:-3482 | Msa1361900:CDS |
| CGGAGAGTGAGGAAACGCGG+AGG | 0.690767 | tig0017690:+4468 | None:intergenic |
| GGGTTGCAGATGTGAAAACA+GGG | 0.702873 | tig0017690:-3219 | Msa1361900:CDS |
| TCTAGGGTAGAAACTCAAGA+CGG | 0.706858 | tig0017690:-1999 | Msa1361900:intron |
| ATTGCAAAGATAAAGAAAGG+GGG | 0.711082 | tig0017690:-1351 | Msa1361900:CDS |
| ATCTGGAGAAGGGTCCAGAG+AGG | 0.721369 | tig0017690:+2880 | None:intergenic |
| AGGGTAGAAACTCAAGACGG+AGG | 0.724058 | tig0017690:-1996 | Msa1361900:CDS |
| TGTGAGTAGATTATATCACG+AGG | 0.743851 | tig0017690:+1951 | None:intergenic |
| GTTGATGGATTGTAACCTGG+TGG | 0.754696 | tig0017690:+864 | None:intergenic |
| GTAATCGTAGAAAGTATCGG+CGG | 0.776533 | tig0017690:+4317 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATAAATTAAAAACT+TGG | + | tig0017690:2233-2252 | None:intergenic | 10.0% |
| !!! | TTTTGTATTTTTTTTTCTTA+GGG | + | tig0017690:4597-4616 | None:intergenic | 10.0% |
| !! | AAAATACTATACAAAGAAAA+TGG | + | tig0017690:635-654 | None:intergenic | 15.0% |
| !!! | AAAATAATTTTGTCTCTAAA+TGG | + | tig0017690:1329-1348 | None:intergenic | 15.0% |
| !!! | TTTTAATTTATATTTCTTCC+TGG | - | tig0017690:2236-2255 | Msa1361900:intron | 15.0% |
| !!! | TTTAATTTATATTTCTTCCT+GGG | - | tig0017690:2237-2256 | Msa1361900:intron | 15.0% |
| !! | CAAAAAAATATAAAAATGCA+AGG | + | tig0017690:2774-2793 | None:intergenic | 15.0% |
| !! | CCAACTAATAAAATTATATT+GGG | + | tig0017690:3848-3867 | None:intergenic | 15.0% |
| !!! | ATATTTTGTATTAAATTAGC+TGG | - | tig0017690:4241-4260 | Msa1361900:intron | 15.0% |
| !! | AAAATTGAGTTTCAAATATT+TGG | - | tig0017690:4470-4489 | Msa1361900:CDS | 15.0% |
| !!! | TTTGTATTTTTTTTTCTTAG+GGG | + | tig0017690:4596-4615 | None:intergenic | 15.0% |
| !!! | GTTTTGTATTTTTTTTTCTT+AGG | + | tig0017690:4598-4617 | None:intergenic | 15.0% |
| !!! | AATTTTATCAATCAATGATG+CGG | - | tig0017690:274-293 | Msa1361900:three_prime_UTR | 20.0% |
| !! | TGATGTAGTATTTGATTAAT+TGG | - | tig0017690:838-857 | Msa1361900:CDS | 20.0% |
| !!! | TAAATTTTAAGTTCCTGAAA+AGG | - | tig0017690:916-935 | Msa1361900:CDS | 20.0% |
| !!! | AGTTTTTGAAAACTATGTTT+GGG | - | tig0017690:1706-1725 | Msa1361900:intron | 20.0% |
| !! | TTCATTATTAAAACACTCTT+GGG | + | tig0017690:2437-2456 | None:intergenic | 20.0% |
| !!! | TTTTAAAATTGCTTCATTTG+AGG | - | tig0017690:2834-2853 | Msa1361900:CDS | 20.0% |
| !! | TAGCATAGAATATTTGAAAA+TGG | + | tig0017690:3114-3133 | None:intergenic | 20.0% |
| !! | ATTATTGCAAAGATAAAGAA+AGG | - | tig0017690:3504-3523 | Msa1361900:CDS | 20.0% |
| !! | TTATTGCAAAGATAAAGAAA+GGG | - | tig0017690:3505-3524 | Msa1361900:CDS | 20.0% |
| !!! | TGTCTTAAATCACTTTTTTT+TGG | - | tig0017690:3616-3635 | Msa1361900:CDS | 20.0% |
| !!! | CCCAATATAATTTTATTAGT+TGG | - | tig0017690:3845-3864 | Msa1361900:intron | 20.0% |
| !! | GCCAACTAATAAAATTATAT+TGG | + | tig0017690:3849-3868 | None:intergenic | 20.0% |
| !!! | ACCTGAATTATTTTTTTATC+TGG | + | tig0017690:3871-3890 | None:intergenic | 20.0% |
| !! | TAATACAAAATATACTGAAC+CGG | + | tig0017690:4234-4253 | None:intergenic | 20.0% |
| !! | AATCATACTCCATAATTAAT+AGG | - | tig0017690:4552-4571 | Msa1361900:CDS | 20.0% |
| !!! | TTGTATTTTTTTTTCTTAGG+GGG | + | tig0017690:4595-4614 | None:intergenic | 20.0% |
| !!! | TTGTTGACTTTTTAGTTACA+TGG | + | tig0017690:744-763 | None:intergenic | 25.0% |
| ! | TACACTGTAAGTAAAAACAA+AGG | + | tig0017690:875-894 | None:intergenic | 25.0% |
| ! | TTTATGAAAATAAGCTGAAC+AGG | - | tig0017690:958-977 | Msa1361900:CDS | 25.0% |
| ! | TACTAAATCTAAAAACTGCA+AGG | + | tig0017690:1108-1127 | None:intergenic | 25.0% |
| !!! | ATTTAGTATTTTTGAGCTTC+TGG | - | tig0017690:1120-1139 | Msa1361900:CDS | 25.0% |
| !! | CGAAGATAAATTTTGTTACT+TGG | - | tig0017690:1540-1559 | Msa1361900:CDS | 25.0% |
| !!! | CAGTTTTTGAAAACTATGTT+TGG | - | tig0017690:1705-1724 | Msa1361900:intron | 25.0% |
| !! | TGCTCATTAGATTGAATTTT+TGG | + | tig0017690:1812-1831 | None:intergenic | 25.0% |
| !! | TTATGATTGATTCAATGCAT+AGG | - | tig0017690:2011-2030 | Msa1361900:intron | 25.0% |
| ! | CTTCATTATTAAAACACTCT+TGG | + | tig0017690:2438-2457 | None:intergenic | 25.0% |
| !!! | GTTTTAATAATGAAGTTCAC+TGG | - | tig0017690:2443-2462 | Msa1361900:intron | 25.0% |
| !!! | AGAATAAGCTGTTTTAGAAA+AGG | + | tig0017690:3018-3037 | None:intergenic | 25.0% |
| ! | TATTGCAAAGATAAAGAAAG+GGG | - | tig0017690:3506-3525 | Msa1361900:CDS | 25.0% |
| ! | GCCAGATAAAAAAATAATTC+AGG | - | tig0017690:3867-3886 | Msa1361900:intron | 25.0% |
| !!! | ACTCAATTTTGAAGAGAAAT+GGG | + | tig0017690:4460-4479 | None:intergenic | 25.0% |
| !!! | AACTCAATTTTGAAGAGAAA+TGG | + | tig0017690:4461-4480 | None:intergenic | 25.0% |
| ! | GCTATTAAGCCTATTAATTA+TGG | + | tig0017690:4564-4583 | None:intergenic | 25.0% |
| ! | TTCGTAATCGTAGAAAGTAT+CGG | + | tig0017690:547-566 | None:intergenic | 30.0% |
| TGCAATAAACAGTTAACTAG+CGG | + | tig0017690:595-614 | None:intergenic | 30.0% | |
| ! | GTATAGTATTTTCCATTTCG+CGG | - | tig0017690:643-662 | Msa1361900:intron | 30.0% |
| TCAAATAAGCTTATCCAAAC+TGG | - | tig0017690:1054-1073 | Msa1361900:CDS | 30.0% | |
| ! | CTAACAGCTACTTTAATGTT+TGG | - | tig0017690:1159-1178 | Msa1361900:CDS | 30.0% |
| ATGTTAGATGATTCAGCTTT+AGG | - | tig0017690:1227-1246 | Msa1361900:intron | 30.0% | |
| ACTGCATTCAAATATACATC+AGG | + | tig0017690:1689-1708 | None:intergenic | 30.0% | |
| TATTCAAGTAAGAACATTCC+AGG | - | tig0017690:1841-1860 | Msa1361900:intron | 30.0% | |
| !!! | CTTGTTTTAGCATCTTTAGA+TGG | - | tig0017690:1920-1939 | Msa1361900:CDS | 30.0% |
| ATCTTTAGATGGTACTACAA+AGG | - | tig0017690:1931-1950 | Msa1361900:CDS | 30.0% | |
| ATCATAATGTACTTCTCATC+TGG | + | tig0017690:1998-2017 | None:intergenic | 30.0% | |
| CAAGGTACAATAAAAGAGTA+TGG | + | tig0017690:2037-2056 | None:intergenic | 30.0% | |
| ! | TACTCTTTTATTGTACCTTG+TGG | - | tig0017690:2037-2056 | Msa1361900:intron | 30.0% |
| ! | AGTTTTTACGAGCAATCATT+CGG | - | tig0017690:2489-2508 | Msa1361900:intron | 30.0% |
| TTTCGTGGAATATTATGGTT+AGG | - | tig0017690:2568-2587 | Msa1361900:intron | 30.0% | |
| ! | TTACCATTCTTTTCTTCGAT+TGG | - | tig0017690:2623-2642 | Msa1361900:intron | 30.0% |
| ! | TCATTTTCTTCCCTCTTTTA+TGG | - | tig0017690:2650-2669 | Msa1361900:intron | 30.0% |
| CAAAAACTGACCATAAAAGA+GGG | + | tig0017690:2663-2682 | None:intergenic | 30.0% | |
| ATTTGAAAATGGTCAAGACT+TGG | + | tig0017690:3103-3122 | None:intergenic | 30.0% | |
| ATGATGATCAAGCATGTAAA+TGG | + | tig0017690:3159-3178 | None:intergenic | 30.0% | |
| !! | CTTGTTTTCTGTATATACAG+AGG | - | tig0017690:3291-3310 | Msa1361900:CDS | 30.0% |
| GTATATACAGAGGAATTTCT+TGG | - | tig0017690:3301-3320 | Msa1361900:CDS | 30.0% | |
| ACGAATCTTGGTATAAAACA+AGG | - | tig0017690:3349-3368 | Msa1361900:CDS | 30.0% | |
| ATTGCAAAGATAAAGAAAGG+GGG | - | tig0017690:3507-3526 | Msa1361900:CDS | 30.0% | |
| GGAAGATATATCATACTGAA+TGG | - | tig0017690:3537-3556 | Msa1361900:CDS | 30.0% | |
| TATATCATACTGAATGGAAG+TGG | - | tig0017690:3543-3562 | Msa1361900:CDS | 30.0% | |
| AAGGAGATTTACAGTTAGAT+AGG | - | tig0017690:3782-3801 | Msa1361900:intron | 30.0% | |
| ATCAGGTATCAAAGAAAAGA+CGG | - | tig0017690:3943-3962 | Msa1361900:intron | 30.0% | |
| GGATACACAAACTATACCAT+CGG | - | tig0017690:295-314 | Msa1361900:three_prime_UTR | 35.0% | |
| ! | ATGATGGTGAAGAAAAAGAG+AGG | + | tig0017690:335-354 | None:intergenic | 35.0% |
| GATACTTTCTACGATTACGA+AGG | - | tig0017690:546-565 | Msa1361900:CDS | 35.0% | |
| AAAATAAGCTGAACAGGTCA+TGG | - | tig0017690:964-983 | Msa1361900:CDS | 35.0% | |
| CTTGAGCACATAAAGACTAA+GGG | + | tig0017690:1080-1099 | None:intergenic | 35.0% | |
| !! | ATGATTCAGCTTTAGGAGTA+GGG | - | tig0017690:1234-1253 | Msa1361900:intron | 35.0% |
| AATGGTGAAAATGACAATGC+AGG | + | tig0017690:1311-1330 | None:intergenic | 35.0% | |
| ! | TTGATGGATACTGCAATTCA+AGG | - | tig0017690:1420-1439 | Msa1361900:CDS | 35.0% |
| ATGTCATTCTACACAGGTTT+AGG | - | tig0017690:1449-1468 | Msa1361900:CDS | 35.0% | |
| TGTCATTCTACACAGGTTTA+GGG | - | tig0017690:1450-1469 | Msa1361900:CDS | 35.0% | |
| ATCCATGAAATTCTTCCTGA+TGG | - | tig0017690:1473-1492 | Msa1361900:CDS | 35.0% | |
| TACCATCAGGAAGAATTTCA+TGG | + | tig0017690:1478-1497 | None:intergenic | 35.0% | |
| AATTTATCTTCGCACCTTCA+GGG | + | tig0017690:1532-1551 | None:intergenic | 35.0% | |
| AAATTTATCTTCGCACCTTC+AGG | + | tig0017690:1533-1552 | None:intergenic | 35.0% | |
| ATACTAGCAAACTCAGAGTA+TGG | - | tig0017690:1618-1637 | Msa1361900:intron | 35.0% | |
| TACTAGCAAACTCAGAGTAT+GGG | - | tig0017690:1619-1638 | Msa1361900:intron | 35.0% | |
| ! | GATGGTACTACAAAGGATTT+TGG | - | tig0017690:1938-1957 | Msa1361900:CDS | 35.0% |
| ! | TTCTTTGGAAATCTTCCACA+AGG | + | tig0017690:2055-2074 | None:intergenic | 35.0% |
| TTGTGGAAGATTTCCAAAGA+AGG | - | tig0017690:2054-2073 | Msa1361900:intron | 35.0% | |
| TTCCAAAGAAGGTAGAGTTA+TGG | - | tig0017690:2065-2084 | Msa1361900:intron | 35.0% | |
| GGATGTAATTGGAATGTCTT+CGG | + | tig0017690:2137-2156 | None:intergenic | 35.0% | |
| CAATTACATCCAATAGTGTG+CGG | - | tig0017690:2146-2165 | Msa1361900:intron | 35.0% | |
| AAGGGATGCGTTCTATTAAT+TGG | - | tig0017690:2170-2189 | Msa1361900:intron | 35.0% | |
| ! | GTTTTTACGAGCAATCATTC+GGG | - | tig0017690:2490-2509 | Msa1361900:intron | 35.0% |
| ATGTATCCATACGCAAGATT+TGG | - | tig0017690:2538-2557 | Msa1361900:intron | 35.0% | |
| TGTATCCATACGCAAGATTT+GGG | - | tig0017690:2539-2558 | Msa1361900:intron | 35.0% | |
| !! | GCTGTTTTCGTGGAATATTA+TGG | - | tig0017690:2563-2582 | Msa1361900:intron | 35.0% |
| AAGCCAATCGAAGAAAAGAA+TGG | + | tig0017690:2629-2648 | None:intergenic | 35.0% | |
| CCAAAAACTGACCATAAAAG+AGG | + | tig0017690:2664-2683 | None:intergenic | 35.0% | |
| ! | CCTCTTTTATGGTCAGTTTT+TGG | - | tig0017690:2661-2680 | Msa1361900:CDS | 35.0% |
| TGTGAGTAGATTATATCACG+AGG | + | tig0017690:2910-2929 | None:intergenic | 35.0% | |
| TCAAGCTTGTGTAATATCAC+CGG | + | tig0017690:2961-2980 | None:intergenic | 35.0% | |
| TGGGTATGGATACAAATTCT+CGG | - | tig0017690:2990-3009 | Msa1361900:CDS | 35.0% | |
| TGATCATCATGACCAACAAT+TGG | - | tig0017690:3169-3188 | Msa1361900:CDS | 35.0% | |
| TATATAGCTCCTGTTAGGAT+AGG | - | tig0017690:3242-3261 | Msa1361900:CDS | 35.0% | |
| ATATAGCTCCTGTTAGGATA+GGG | - | tig0017690:3243-3262 | Msa1361900:CDS | 35.0% | |
| ! | TGGCTTTTGTATACGAATCT+TGG | - | tig0017690:3337-3356 | Msa1361900:CDS | 35.0% |
| AAACAAGGCGAATAAGAACA+TGG | - | tig0017690:3364-3383 | Msa1361900:CDS | 35.0% | |
| AACAAGGCGAATAAGAACAT+GGG | - | tig0017690:3365-3384 | Msa1361900:CDS | 35.0% | |
| ATGTCAAACAGATCAAGGAA+TGG | + | tig0017690:3591-3610 | None:intergenic | 35.0% | |
| CTTACATGTCAAACAGATCA+AGG | + | tig0017690:3596-3615 | None:intergenic | 35.0% | |
| AGTAAAAATGAGAATCTGCG+AGG | + | tig0017690:3649-3668 | None:intergenic | 35.0% | |
| !! | GCAGATTCTCATTTTTACTC+TGG | - | tig0017690:3650-3669 | Msa1361900:intron | 35.0% |
| !! | GATTCTCATTTTTACTCTGG+TGG | - | tig0017690:3653-3672 | Msa1361900:intron | 35.0% |
| !! | TCATTTTTACTCTGGTGGTT+TGG | - | tig0017690:3658-3677 | Msa1361900:intron | 35.0% |
| !! | CCTGTATTTCTGCAACATTT+TGG | + | tig0017690:3685-3704 | None:intergenic | 35.0% |
| CCAAAATGTTGCAGAAATAC+AGG | - | tig0017690:3682-3701 | Msa1361900:intron | 35.0% | |
| TTGCAGAAATACAGGTAGTA+AGG | - | tig0017690:3690-3709 | Msa1361900:intron | 35.0% | |
| TCAGGTATCAAAGAAAAGAC+GGG | - | tig0017690:3944-3963 | Msa1361900:intron | 35.0% | |
| CTTTGCTCTTAAATTCTCCA+GGG | + | tig0017690:4053-4072 | None:intergenic | 35.0% | |
| TCTTTGCTCTTAAATTCTCC+AGG | + | tig0017690:4054-4073 | None:intergenic | 35.0% | |
| !! | CTGTTTGGCTCTAGATAATT+AGG | - | tig0017690:4183-4202 | Msa1361900:intron | 35.0% |
| TTTACTTAGTTCCTCTGTTC+CGG | - | tig0017690:4212-4231 | Msa1361900:intron | 35.0% | |
| TTGACGACTTTAAGTAATGC+AGG | - | tig0017690:4272-4291 | Msa1361900:intron | 35.0% | |
| GAAGATAAGGAGATTTCTCT+AGG | + | tig0017690:4434-4453 | None:intergenic | 35.0% | |
| TGAAGAAAAAGAGAGGAGAG+TGG | + | tig0017690:328-347 | None:intergenic | 40.0% | |
| !! | GTAATCGTAGAAAGTATCGG+CGG | + | tig0017690:544-563 | None:intergenic | 40.0% |
| ATAAAGACTAAGGGCCAGTT+TGG | + | tig0017690:1071-1090 | None:intergenic | 40.0% | |
| CCTTGAGCACATAAAGACTA+AGG | + | tig0017690:1081-1100 | None:intergenic | 40.0% | |
| ! | CCTTAGTCTTTATGTGCTCA+AGG | - | tig0017690:1078-1097 | Msa1361900:CDS | 40.0% |
| !! | GATGATTCAGCTTTAGGAGT+AGG | - | tig0017690:1233-1252 | Msa1361900:intron | 40.0% |
| GAAAATGACAATGCAGGAAC+TGG | + | tig0017690:1305-1324 | None:intergenic | 40.0% | |
| ATTCTTCCTGATGGTACACT+AGG | - | tig0017690:1482-1501 | Msa1361900:CDS | 40.0% | |
| !! | AACATTCCAGGATTTGCTGA+AGG | - | tig0017690:1853-1872 | Msa1361900:intron | 40.0% |
| ATTCATCCTTCAGCAAATCC+TGG | + | tig0017690:1862-1881 | None:intergenic | 40.0% | |
| AGATGCTAAAACAAGCTGAG+AGG | + | tig0017690:1915-1934 | None:intergenic | 40.0% | |
| TGTACTTCTCATCTGGAGAA+GGG | + | tig0017690:1991-2010 | None:intergenic | 40.0% | |
| ATGTACTTCTCATCTGGAGA+AGG | + | tig0017690:1992-2011 | None:intergenic | 40.0% | |
| CTCCATAACTCTACCTTCTT+TGG | + | tig0017690:2070-2089 | None:intergenic | 40.0% | |
| TGCCGATGGAAAATTTGTCA+GGG | - | tig0017690:2090-2109 | Msa1361900:intron | 40.0% | |
| ! | CTCCCTGACAAATTTTCCAT+CGG | + | tig0017690:2095-2114 | None:intergenic | 40.0% |
| AATTGGAATGTCTTCGGCAA+GGG | + | tig0017690:2131-2150 | None:intergenic | 40.0% | |
| TAATTGGAATGTCTTCGGCA+AGG | + | tig0017690:2132-2151 | None:intergenic | 40.0% | |
| CGCACACTATTGGATGTAAT+TGG | + | tig0017690:2148-2167 | None:intergenic | 40.0% | |
| ATAAGCCATCAACGCTTTAC+TGG | - | tig0017690:2200-2219 | Msa1361900:intron | 40.0% | |
| !! | CTATACCAGTAAAGCGTTGA+TGG | + | tig0017690:2208-2227 | None:intergenic | 40.0% |
| GTATCCATACGCAAGATTTG+GGG | - | tig0017690:2540-2559 | Msa1361900:intron | 40.0% | |
| TATCCATACGCAAGATTTGG+GGG | - | tig0017690:2541-2560 | Msa1361900:intron | 40.0% | |
| GTGAAATTTGCAAGCCAATG+TGG | - | tig0017690:2595-2614 | Msa1361900:intron | 40.0% | |
| GAATGGTAAGTGATCCACAT+TGG | + | tig0017690:2612-2631 | None:intergenic | 40.0% | |
| ! | TTGCTTCATTTGAGGTCTCT+AGG | - | tig0017690:2842-2861 | Msa1361900:CDS | 40.0% |
| ! | TGCTTCATTTGAGGTCTCTA+GGG | - | tig0017690:2843-2862 | Msa1361900:CDS | 40.0% |
| ! | TCTAGGGTAGAAACTCAAGA+CGG | - | tig0017690:2859-2878 | Msa1361900:CDS | 40.0% |
| ACAAGCTTGATCTTCGCTAT+GGG | - | tig0017690:2971-2990 | Msa1361900:CDS | 40.0% | |
| ACAATGTCATCTGCAAACCT+CGG | + | tig0017690:3070-3089 | None:intergenic | 40.0% | |
| TGAGCATGCAAACCAATTGT+TGG | + | tig0017690:3184-3203 | None:intergenic | 40.0% | |
| AGGAGCTATATAGATGCTCA+TGG | + | tig0017690:3234-3253 | None:intergenic | 40.0% | |
| GCATCTATATAGCTCCTGTT+AGG | - | tig0017690:3237-3256 | Msa1361900:CDS | 40.0% | |
| ! | TTCTTGGTGTGATGATTCAC+TGG | - | tig0017690:3317-3336 | Msa1361900:CDS | 40.0% |
| ! | CTTCTGAAGATCGATCGAAT+AGG | + | tig0017690:3428-3447 | None:intergenic | 40.0% |
| AGGTAGTAAGGAACGAATCT+GGG | - | tig0017690:3702-3721 | Msa1361900:intron | 40.0% | |
| GTCTGTTGTTGCTCTAATGT+CGG | - | tig0017690:3750-3769 | Msa1361900:intron | 40.0% | |
| CTAATGTCGGATCAAGAAGA+AGG | - | tig0017690:3763-3782 | Msa1361900:intron | 40.0% | |
| CATTGCAGAAAGAGATGATC+AGG | - | tig0017690:3926-3945 | Msa1361900:intron | 40.0% | |
| CAGGTATCAAAGAAAAGACG+GGG | - | tig0017690:3945-3964 | Msa1361900:intron | 40.0% | |
| !! | TCTGTTGATGGATTGTAACC+TGG | + | tig0017690:4000-4019 | None:intergenic | 40.0% |
| GGTTACAATCCATCAACAGA+TGG | - | tig0017690:4000-4019 | Msa1361900:intron | 40.0% | |
| GCTCTCCAAATGAATTTGCA+GGG | - | tig0017690:4094-4113 | Msa1361900:intron | 40.0% | |
| CCAAATGAATTTGCAGGGAT+CGG | - | tig0017690:4099-4118 | Msa1361900:intron | 40.0% | |
| TGACAATTATCTGCGCTGTT+TGG | - | tig0017690:4168-4187 | Msa1361900:intron | 40.0% | |
| AATATACTGAACCGGAACAG+AGG | + | tig0017690:4226-4245 | None:intergenic | 40.0% | |
| GTGAAGTAGAGGCTAATGAT+AGG | - | tig0017690:4338-4357 | Msa1361900:CDS | 40.0% | |
| GAGAAATGGGACTGAAGATA+AGG | + | tig0017690:4447-4466 | None:intergenic | 40.0% | |
| !! | TTGGTCTCTTCACTTTTGTG+AGG | - | tig0017690:4489-4508 | Msa1361900:CDS | 40.0% |
| !! | TCTTCACTTTTGTGAGGCTT+AGG | - | tig0017690:4495-4514 | Msa1361900:CDS | 40.0% |
| TGAGGCTTAGGTTTCTTCTT+CGG | - | tig0017690:4507-4526 | Msa1361900:CDS | 40.0% | |
| GAAGAAGAGAAGGGTTGGAA+GGG | + | tig0017690:362-381 | None:intergenic | 45.0% | |
| AGCAGAAATCAACCGCGAAA+TGG | + | tig0017690:658-677 | None:intergenic | 45.0% | |
| TGTTCCTCCACCTGAGATTA+GGG | - | tig0017690:1262-1281 | Msa1361900:intron | 45.0% | |
| TCAACGATGTCCCTAATCTC+AGG | + | tig0017690:1275-1294 | None:intergenic | 45.0% | |
| AATGACAATGCAGGAACTGG+CGG | + | tig0017690:1302-1321 | None:intergenic | 45.0% | |
| CTTGCTAATTCAGTCAGTGG+AGG | + | tig0017690:1371-1390 | None:intergenic | 45.0% | |
| ! | CTCCACTGACTGAATTAGCA+AGG | - | tig0017690:1369-1388 | Msa1361900:CDS | 45.0% |
| ACTGACTGAATTAGCAAGGC+CGG | - | tig0017690:1373-1392 | Msa1361900:CDS | 45.0% | |
| ! | AAACCAGCCAACTTTTCCTC+CGG | + | tig0017690:1395-1414 | None:intergenic | 45.0% |
| !! | TTGGCTGGTTTACGTGTTGA+TGG | - | tig0017690:1404-1423 | Msa1361900:CDS | 45.0% |
| AGTCGCATGTCATTCTACAC+AGG | - | tig0017690:1443-1462 | Msa1361900:CDS | 45.0% | |
| TAACCGTGTATCTCAACCTC+GGG | + | tig0017690:1509-1528 | None:intergenic | 45.0% | |
| GTAACCGTGTATCTCAACCT+CGG | + | tig0017690:1510-1529 | None:intergenic | 45.0% | |
| TTACTTGGTCTCCTGATGCT+CGG | - | tig0017690:1555-1574 | Msa1361900:intron | 45.0% | |
| AAGGATAAATGCCGAGCATC+AGG | + | tig0017690:1569-1588 | None:intergenic | 45.0% | |
| CTCATTCACACGAATGCTGA+AGG | + | tig0017690:1588-1607 | None:intergenic | 45.0% | |
| CTTCAGCATTCGTGTGAATG+AGG | - | tig0017690:1586-1605 | Msa1361900:intron | 45.0% | |
| TGGGTTGCAGATGTGAAAAC+AGG | - | tig0017690:1638-1657 | Msa1361900:intron | 45.0% | |
| GGGTTGCAGATGTGAAAACA+GGG | - | tig0017690:1639-1658 | Msa1361900:intron | 45.0% | |
| ACATCAGGCGACTGAAACAA+AGG | + | tig0017690:1674-1693 | None:intergenic | 45.0% | |
| AGCTCCACCAAAGAAACCTT+TGG | - | tig0017690:1775-1794 | Msa1361900:intron | 45.0% | |
| GGAACCAAAGGTTTCTTTGG+TGG | + | tig0017690:1782-1801 | None:intergenic | 45.0% | |
| CCAGGAACCAAAGGTTTCTT+TGG | + | tig0017690:1785-1804 | None:intergenic | 45.0% | |
| ! | CCAAAGAAACCTTTGGTTCC+TGG | - | tig0017690:1782-1801 | Msa1361900:intron | 45.0% |
| ! | AAGAAACCTTTGGTTCCTGG+TGG | - | tig0017690:1785-1804 | Msa1361900:intron | 45.0% |
| ! | AGAAACCTTTGGTTCCTGGT+GGG | - | tig0017690:1786-1805 | Msa1361900:intron | 45.0% |
| !!! | GATTGAATTTTTGGCCCACC+AGG | + | tig0017690:1803-1822 | None:intergenic | 45.0% |
| ! | AGAGAGGTATAAACAGCTGG+AGG | + | tig0017690:1965-1984 | None:intergenic | 45.0% |
| TCCAGCTGTTTATACCTCTC+TGG | - | tig0017690:1964-1983 | Msa1361900:CDS | 45.0% | |
| ! | TCCAGAGAGGTATAAACAGC+TGG | + | tig0017690:1968-1987 | None:intergenic | 45.0% |
| ! | GTGCCGATGGAAAATTTGTC+AGG | - | tig0017690:2089-2108 | Msa1361900:intron | 45.0% |
| ATTGGAATGTCTTCGGCAAG+GGG | + | tig0017690:2130-2149 | None:intergenic | 45.0% | |
| ACATCCAATAGTGTGCGGAA+AGG | - | tig0017690:2151-2170 | Msa1361900:intron | 45.0% | |
| CATCCAATAGTGTGCGGAAA+GGG | - | tig0017690:2152-2171 | Msa1361900:intron | 45.0% | |
| TTCTTCCTGGGCATGTACTT+TGG | - | tig0017690:2249-2268 | Msa1361900:intron | 45.0% | |
| CACAAGCTTGATCTTCGCTA+TGG | - | tig0017690:2970-2989 | Msa1361900:CDS | 45.0% | |
| CTTGATCTTCGCTATGGGTA+TGG | - | tig0017690:2976-2995 | Msa1361900:CDS | 45.0% | |
| CATCAACCATGAACCTTCTC+AGG | + | tig0017690:3269-3288 | None:intergenic | 45.0% | |
| GAAGATGCATACTCTGATCC+TGG | - | tig0017690:3444-3463 | Msa1361900:CDS | 45.0% | |
| ATAAAGAAAGGGGGCGATGA+AGG | - | tig0017690:3516-3535 | Msa1361900:CDS | 45.0% | |
| CAGGTAGTAAGGAACGAATC+TGG | - | tig0017690:3701-3720 | Msa1361900:intron | 45.0% | |
| ACGAATCTGGGAGAGTGATA+AGG | - | tig0017690:3714-3733 | Msa1361900:intron | 45.0% | |
| AATGATGCAAGCTGAGGGTA+TGG | + | tig0017690:3910-3929 | None:intergenic | 45.0% | |
| TCTGCAATGATGCAAGCTGA+GGG | + | tig0017690:3915-3934 | None:intergenic | 45.0% | |
| TTCTGCAATGATGCAAGCTG+AGG | + | tig0017690:3916-3935 | None:intergenic | 45.0% | |
| GCTACATTATACTTGCCACC+AGG | - | tig0017690:3979-3998 | Msa1361900:intron | 45.0% | |
| !! | GTTGATGGATTGTAACCTGG+TGG | + | tig0017690:3997-4016 | None:intergenic | 45.0% |
| AGATGGTCCTTTGCCATGTT+TGG | - | tig0017690:4017-4036 | Msa1361900:intron | 45.0% | |
| GTCCTTTGCCATGTTTGGTT+TGG | - | tig0017690:4022-4041 | Msa1361900:intron | 45.0% | |
| GACCAAACCAAACATGGCAA+AGG | + | tig0017690:4027-4046 | None:intergenic | 45.0% | |
| GGGTAAGACCAAACCAAACA+TGG | + | tig0017690:4033-4052 | None:intergenic | 45.0% | |
| !! | TGTTTGGTTTGGTCTTACCC+TGG | - | tig0017690:4033-4052 | Msa1361900:intron | 45.0% |
| GGCTCTCCAAATGAATTTGC+AGG | - | tig0017690:4093-4112 | Msa1361900:intron | 45.0% | |
| CCGATCCCTGCAAATTCATT+TGG | + | tig0017690:4102-4121 | None:intergenic | 45.0% | |
| ! | CCTTTTAGCCAGCCAAAGAA+GGG | + | tig0017690:4136-4155 | None:intergenic | 45.0% |
| ! | ACCTTTTAGCCAGCCAAAGA+AGG | + | tig0017690:4137-4156 | None:intergenic | 45.0% |
| TGCAGGTTTGCAATCCTATC+TGG | - | tig0017690:4289-4308 | Msa1361900:intron | 45.0% | |
| GGCCCAACCATTCCTATTAT+CGG | - | tig0017690:4310-4329 | Msa1361900:intron | 45.0% | |
| CGCCGATAATAGGAATGGTT+GGG | + | tig0017690:4315-4334 | None:intergenic | 45.0% | |
| TCGCCGATAATAGGAATGGT+TGG | + | tig0017690:4316-4335 | None:intergenic | 45.0% | |
| AACCATTCCTATTATCGGCG+AGG | - | tig0017690:4315-4334 | Msa1361900:CDS | 45.0% | |
| ACCATTCCTATTATCGGCGA+GGG | - | tig0017690:4316-4335 | Msa1361900:CDS | 45.0% | |
| GGAAGAAGAGAAGGGTTGGA+AGG | + | tig0017690:363-382 | None:intergenic | 50.0% | |
| GAGAGGAAGAAGAGAAGGGT+TGG | + | tig0017690:367-386 | None:intergenic | 50.0% | |
| GAGCGAGAGGAAGAAGAGAA+GGG | + | tig0017690:371-390 | None:intergenic | 50.0% | |
| AGGTGCTAAATGGCGAAAGC+GGG | + | tig0017690:454-473 | None:intergenic | 50.0% | |
| ! | GAGGTGCTAAATGGCGAAAG+CGG | + | tig0017690:455-474 | None:intergenic | 50.0% |
| !! | CAGCAGTGAGAGGTGCTAAA+TGG | + | tig0017690:464-483 | None:intergenic | 50.0% |
| ACTGCTGTCTCCACTGAAGA+CGG | - | tig0017690:477-496 | Msa1361900:three_prime_UTR | 50.0% | |
| !! | ATCGTAGAAAGTATCGGCGG+TGG | + | tig0017690:541-560 | None:intergenic | 50.0% |
| ! | CCTTCGAGTACAGCCTTTTC+AGG | + | tig0017690:932-951 | None:intergenic | 50.0% |
| CCTGAAAAGGCTGTACTCGA+AGG | - | tig0017690:929-948 | Msa1361900:CDS | 50.0% | |
| GTGTTCCTCCACCTGAGATT+AGG | - | tig0017690:1261-1280 | Msa1361900:intron | 50.0% | |
| ATGTCCCTAATCTCAGGTGG+AGG | + | tig0017690:1269-1288 | None:intergenic | 50.0% | |
| ACGATGTCCCTAATCTCAGG+TGG | + | tig0017690:1272-1291 | None:intergenic | 50.0% | |
| GGCCTTGCTAATTCAGTCAG+TGG | + | tig0017690:1374-1393 | None:intergenic | 50.0% | |
| GAGATACACGGTTACCCTGA+AGG | - | tig0017690:1515-1534 | Msa1361900:CDS | 50.0% | |
| CAGCATTCGTGTGAATGAGG+AGG | - | tig0017690:1589-1608 | Msa1361900:intron | 50.0% | |
| TGCACCATTCCATCAACTCG+TGG | - | tig0017690:1752-1771 | Msa1361900:intron | 50.0% | |
| !! | AGCTCCACGAGTTGATGGAA+TGG | + | tig0017690:1759-1778 | None:intergenic | 50.0% |
| !! | GTAGAGTTATGGAGTGCCGA+TGG | - | tig0017690:2076-2095 | Msa1361900:intron | 50.0% |
| CATCCCTTTCCGCACACTAT+TGG | + | tig0017690:2158-2177 | None:intergenic | 50.0% | |
| TGTTGCCAAAGTACATGCCC+AGG | + | tig0017690:2257-2276 | None:intergenic | 50.0% | |
| GAGCAATCATTCGGGTACAC+AGG | - | tig0017690:2498-2517 | Msa1361900:intron | 50.0% | |
| !! | AGATTTGGGGGCTGTTTTCG+TGG | - | tig0017690:2553-2572 | Msa1361900:intron | 50.0% |
| AGGGTAGAAACTCAAGACGG+AGG | - | tig0017690:2862-2881 | Msa1361900:CDS | 50.0% | |
| AGACGGAGGTGATGCAAAAG+TGG | - | tig0017690:2876-2895 | Msa1361900:CDS | 50.0% | |
| ! | CAACCTGCTGAAGCACTAGA+AGG | - | tig0017690:2928-2947 | Msa1361900:CDS | 50.0% |
| TCACCTTCTAGTGCTTCAGC+AGG | + | tig0017690:2934-2953 | None:intergenic | 50.0% | |
| AGCACTAGAAGGTGAACAGC+CGG | - | tig0017690:2939-2958 | Msa1361900:CDS | 50.0% | |
| TTCTCAGGCCCTATCCTAAC+AGG | + | tig0017690:3254-3273 | None:intergenic | 50.0% | |
| TGTTAGGATAGGGCCTGAGA+AGG | - | tig0017690:3253-3272 | Msa1361900:CDS | 50.0% | |
| ATAGGGCCTGAGAAGGTTCA+TGG | - | tig0017690:3260-3279 | Msa1361900:CDS | 50.0% | |
| AGAACATGGGTAGTCTCTCC+TGG | - | tig0017690:3378-3397 | Msa1361900:CDS | 50.0% | |
| GATCGATCGAATAGGATGCG+TGG | + | tig0017690:3420-3439 | None:intergenic | 50.0% | |
| GAAGTGGTGCAACACCAGAA+GGG | - | tig0017690:3559-3578 | Msa1361900:CDS | 50.0% | |
| AGGAATGGAACGTTCCCTTC+TGG | + | tig0017690:3576-3595 | None:intergenic | 50.0% | |
| ! | CAAGCTGAGGGTATGGATGA+GGG | + | tig0017690:3903-3922 | None:intergenic | 50.0% |
| GGCAAAGGACCATCTGTTGA+TGG | + | tig0017690:4012-4031 | None:intergenic | 50.0% | |
| CATTTGGAGAGCCTCGAACT+TGG | + | tig0017690:4086-4105 | None:intergenic | 50.0% | |
| ! | CCCTTCTTTGGCTGGCTAAA+AGG | - | tig0017690:4133-4152 | Msa1361900:intron | 50.0% |
| TAGGAATGGTTGGGCCAGAT+AGG | + | tig0017690:4306-4325 | None:intergenic | 50.0% | |
| ACCCTCGCCGATAATAGGAA+TGG | + | tig0017690:4320-4339 | None:intergenic | 50.0% | |
| ACTTCACCCTCGCCGATAAT+AGG | + | tig0017690:4325-4344 | None:intergenic | 50.0% | |
| GGGTTGGAAGGGAACGATGA+TGG | + | tig0017690:351-370 | None:intergenic | 55.0% | |
| GGAGCGAGAGGAAGAAGAGA+AGG | + | tig0017690:372-391 | None:intergenic | 55.0% | |
| TAAATGGCGAAAGCGGGAGG+TGG | + | tig0017690:448-467 | None:intergenic | 55.0% | |
| TGCTAAATGGCGAAAGCGGG+AGG | + | tig0017690:451-470 | None:intergenic | 55.0% | |
| TCAGTGGAGACAGCAGTGAG+AGG | + | tig0017690:474-493 | None:intergenic | 55.0% | |
| GGAAGAAACGGAGCCGTTGA+CGG | + | tig0017690:514-533 | None:intergenic | 55.0% | |
| !! | GTAGAAAGTATCGGCGGTGG+CGG | + | tig0017690:538-557 | None:intergenic | 55.0% |
| GACTGAATTAGCAAGGCCGG+AGG | - | tig0017690:1376-1395 | Msa1361900:CDS | 55.0% | |
| AGCAAGGCCGGAGGAAAAGT+TGG | - | tig0017690:1385-1404 | Msa1361900:CDS | 55.0% | |
| TCGGGTCCTAGTGTACCATC+AGG | + | tig0017690:1491-1510 | None:intergenic | 55.0% | |
| TGATGGTACACTAGGACCCG+AGG | - | tig0017690:1490-1509 | Msa1361900:CDS | 55.0% | |
| GGACCCGAGGTTGAGATACA+CGG | - | tig0017690:1503-1522 | Msa1361900:CDS | 55.0% | |
| TTTGGCCCACCAGGAACCAA+AGG | + | tig0017690:1794-1813 | None:intergenic | 55.0% | |
| ATCTGGAGAAGGGTCCAGAG+AGG | + | tig0017690:1981-2000 | None:intergenic | 55.0% | |
| CAGCCCCCAAATCTTGCGTA+TGG | + | tig0017690:2547-2566 | None:intergenic | 55.0% | |
| ! | AAGTGTGCTGCTCAAAGCCG+AGG | - | tig0017690:3050-3069 | Msa1361900:CDS | 55.0% |
| GGAGTCACGTCTTCAGATCC+AGG | + | tig0017690:3399-3418 | None:intergenic | 55.0% | |
| GCTTGAGTTCTCCGCAGCAT+GGG | + | tig0017690:3474-3493 | None:intergenic | 55.0% | |
| AGCTTGAGTTCTCCGCAGCA+TGG | + | tig0017690:3475-3494 | None:intergenic | 55.0% | |
| ATGCTGCGGAGAACTCAAGC+TGG | - | tig0017690:3474-3493 | Msa1361900:CDS | 55.0% | |
| TGCTGCGGAGAACTCAAGCT+GGG | - | tig0017690:3475-3494 | Msa1361900:CDS | 55.0% | |
| GGAAGTGGTGCAACACCAGA+AGG | - | tig0017690:3558-3577 | Msa1361900:CDS | 55.0% | |
| ! | GCAAGCTGAGGGTATGGATG+AGG | + | tig0017690:3904-3923 | None:intergenic | 55.0% |
| GATGCTGCTAGCCAAGTTCG+AGG | - | tig0017690:4072-4091 | Msa1361900:intron | 55.0% | |
| GTTCCACGTCAGCCCTTCTT+TGG | - | tig0017690:4121-4140 | Msa1361900:intron | 55.0% | |
| TATCGGCGAGGGTGAAGTAG+AGG | - | tig0017690:4327-4346 | Msa1361900:CDS | 55.0% | |
| CGACGGAGAGTGAGGAAACG+CGG | + | tig0017690:396-415 | None:intergenic | 60.0% | |
| AGTTGGCAGCGGTTCTGCGA+CGG | + | tig0017690:413-432 | None:intergenic | 60.0% | |
| CATGGAGGCGAAGTTGGCAG+CGG | + | tig0017690:424-443 | None:intergenic | 60.0% | |
| GGTGGACATGGAGGCGAAGT+TGG | + | tig0017690:430-449 | None:intergenic | 60.0% | |
| AAAGCGGGAGGTGGACATGG+AGG | + | tig0017690:439-458 | None:intergenic | 60.0% | |
| AGGCCGGAGGAAAAGTTGGC+TGG | - | tig0017690:1389-1408 | Msa1361900:CDS | 60.0% | |
| ! | GGTGGAGCTCCACGAGTTGA+TGG | + | tig0017690:1764-1783 | None:intergenic | 60.0% |
| ! | ATCCTGGCTCTCCCATGCTG+CGG | - | tig0017690:3460-3479 | Msa1361900:CDS | 60.0% |
| CAGCCAAAGAAGGGCTGACG+TGG | + | tig0017690:4127-4146 | None:intergenic | 60.0% | |
| CACGTCAGCCCTTCTTTGGC+TGG | - | tig0017690:4125-4144 | Msa1361900:intron | 60.0% | |
| GGAGAGTGGAGCGATGCCGA+TGG | + | tig0017690:314-333 | None:intergenic | 65.0% | |
| AGGAAACGCGGAGGAGCGAG+AGG | + | tig0017690:384-403 | None:intergenic | 65.0% | |
| CGGAGAGTGAGGAAACGCGG+AGG | + | tig0017690:393-412 | None:intergenic | 65.0% | |
| CGGTTCTGCGACGGAGAGTG+AGG | + | tig0017690:404-423 | None:intergenic | 65.0% | |
| GCGAAAGCGGGAGGTGGACA+TGG | + | tig0017690:442-461 | None:intergenic | 65.0% | |
| GTCTCCACTGAAGACGGCGC+CGG | - | tig0017690:483-502 | Msa1361900:three_prime_UTR | 65.0% | |
| !! | GGCGGTGGCGGAGGAAGAAA+CGG | + | tig0017690:526-545 | None:intergenic | 65.0% |
| !! | GAAAGTATCGGCGGTGGCGG+AGG | + | tig0017690:535-554 | None:intergenic | 65.0% |
| ! | TCCACTGAAGACGGCGCCGG+TGG | - | tig0017690:486-505 | Msa1361900:three_prime_UTR | 70.0% |
| TCCACCGGCGCCGTCTTCAG+TGG | + | tig0017690:490-509 | None:intergenic | 70.0% | |
| GGAGCCGTTGACGGCTCCAC+CGG | + | tig0017690:505-524 | None:intergenic | 70.0% | |
| CTCCGCAGCATGGGAGAGCC+AGG | + | tig0017690:3465-3484 | None:intergenic | 70.0% | |
| !! | GGCGCCGGTGGAGCCGTCAA+CGG | - | tig0017690:498-517 | Msa1361900:exon | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017690 | gene | 246 | 4634 | 246 | ID=Msa1361900;Name=Msa1361900 |
| tig0017690 | mRNA | 246 | 4634 | 246 | ID=Msa1361900-mRNA-1;Parent=Msa1361900;Name=Msa1361900-mRNA-1;_AED=0.03;_eAED=0.03;_QI=42|1|1|1|1|1|6|271|741 |
| tig0017690 | exon | 246 | 586 | 246 | ID=Msa1361900-mRNA-1:exon:12757;Parent=Msa1361900-mRNA-1 |
| tig0017690 | exon | 726 | 1184 | 726 | ID=Msa1361900-mRNA-1:exon:12756;Parent=Msa1361900-mRNA-1 |
| tig0017690 | exon | 1270 | 1569 | 1270 | ID=Msa1361900-mRNA-1:exon:12755;Parent=Msa1361900-mRNA-1 |
| tig0017690 | exon | 1888 | 2016 | 1888 | ID=Msa1361900-mRNA-1:exon:12754;Parent=Msa1361900-mRNA-1 |
| tig0017690 | exon | 2659 | 3646 | 2659 | ID=Msa1361900-mRNA-1:exon:12753;Parent=Msa1361900-mRNA-1 |
| tig0017690 | exon | 4313 | 4634 | 4313 | ID=Msa1361900-mRNA-1:exon:12752;Parent=Msa1361900-mRNA-1 |
| tig0017690 | five_prime_UTR | 4593 | 4634 | 4593 | ID=Msa1361900-mRNA-1:five_prime_utr;Parent=Msa1361900-mRNA-1 |
| tig0017690 | CDS | 4313 | 4592 | 4313 | ID=Msa1361900-mRNA-1:cds;Parent=Msa1361900-mRNA-1 |
| tig0017690 | CDS | 2659 | 3646 | 2659 | ID=Msa1361900-mRNA-1:cds;Parent=Msa1361900-mRNA-1 |
| tig0017690 | CDS | 1888 | 2016 | 1888 | ID=Msa1361900-mRNA-1:cds;Parent=Msa1361900-mRNA-1 |
| tig0017690 | CDS | 1270 | 1569 | 1270 | ID=Msa1361900-mRNA-1:cds;Parent=Msa1361900-mRNA-1 |
| tig0017690 | CDS | 726 | 1184 | 726 | ID=Msa1361900-mRNA-1:cds;Parent=Msa1361900-mRNA-1 |
| tig0017690 | CDS | 517 | 586 | 517 | ID=Msa1361900-mRNA-1:cds;Parent=Msa1361900-mRNA-1 |
| tig0017690 | three_prime_UTR | 246 | 516 | 246 | ID=Msa1361900-mRNA-1:three_prime_utr;Parent=Msa1361900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
