Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369100 | XP_039684810.1 | 94.898 | 490 | 24 | 1 | 1 | 490 | 1 | 489 | 0.0 | 952 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369100 | sp|Q9FY82|NAC82_ARATH | 54.812 | 239 | 102 | 2 | 1 | 235 | 1 | 237 | 2.00e-84 | 271 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369100 | G7LE14 | 94.898 | 490 | 24 | 1 | 1 | 490 | 1 | 489 | 0.0 | 952 |
Gene ID | Type | Classification |
---|---|---|
Msa1369100 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1143700 | Msa1369100 | 0.966283 | 1.027850e-125 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369100 | MtrunA17_Chr8g0384201 | 94.898 | 490 | 24 | 1 | 1 | 490 | 1 | 489 | 0.0 | 952 |
Msa1369100 | MtrunA17_Chr8g0364791 | 72.577 | 485 | 85 | 7 | 1 | 484 | 1 | 438 | 0.0 | 677 |
Msa1369100 | MtrunA17_Chr3g0130101 | 62.553 | 235 | 82 | 3 | 1 | 229 | 1 | 235 | 3.79e-102 | 310 |
Msa1369100 | MtrunA17_Chr1g0201021 | 54.857 | 175 | 79 | 0 | 7 | 181 | 20 | 194 | 3.96e-65 | 220 |
Msa1369100 | MtrunA17_Chr1g0197361 | 54.651 | 172 | 72 | 3 | 8 | 176 | 10 | 178 | 6.03e-64 | 218 |
Msa1369100 | MtrunA17_Chr3g0092671 | 52.000 | 175 | 78 | 3 | 7 | 178 | 6 | 177 | 2.38e-61 | 209 |
Msa1369100 | MtrunA17_Chr1g0197351 | 52.660 | 188 | 82 | 2 | 6 | 187 | 42 | 228 | 1.81e-56 | 195 |
Msa1369100 | MtrunA17_Chr6g0481091 | 52.941 | 153 | 72 | 0 | 6 | 158 | 6 | 158 | 1.63e-54 | 182 |
Msa1369100 | MtrunA17_Chr2g0309891 | 52.229 | 157 | 74 | 1 | 1 | 156 | 1 | 157 | 4.87e-53 | 182 |
Msa1369100 | MtrunA17_Chr5g0433781 | 49.112 | 169 | 85 | 1 | 1 | 168 | 1 | 169 | 9.41e-51 | 183 |
Msa1369100 | MtrunA17_Chr3g0109821 | 49.112 | 169 | 84 | 2 | 1 | 167 | 1 | 169 | 5.62e-50 | 181 |
Msa1369100 | MtrunA17_Chr5g0428991 | 46.497 | 157 | 84 | 0 | 1 | 157 | 20 | 176 | 3.94e-47 | 172 |
Msa1369100 | MtrunA17_Chr3g0128151 | 47.436 | 156 | 82 | 0 | 1 | 156 | 17 | 172 | 3.92e-46 | 169 |
Msa1369100 | MtrunA17_Chr4g0056541 | 45.078 | 193 | 96 | 6 | 8 | 196 | 9 | 195 | 7.18e-46 | 164 |
Msa1369100 | MtrunA17_Chr5g0400461 | 43.784 | 185 | 94 | 2 | 1 | 178 | 1 | 182 | 1.17e-45 | 162 |
Msa1369100 | MtrunA17_Chr4g0054791 | 45.455 | 165 | 87 | 1 | 1 | 162 | 1 | 165 | 3.86e-45 | 160 |
Msa1369100 | MtrunA17_Chr3g0128111 | 46.711 | 152 | 77 | 2 | 7 | 156 | 43 | 192 | 4.60e-45 | 158 |
Msa1369100 | MtrunA17_Chr2g0309331 | 45.882 | 170 | 84 | 4 | 8 | 175 | 12 | 175 | 5.29e-45 | 160 |
Msa1369100 | MtrunA17_Chr4g0060931 | 37.917 | 240 | 133 | 6 | 6 | 241 | 17 | 244 | 6.38e-45 | 161 |
Msa1369100 | MtrunA17_Chr4g0076731 | 44.872 | 156 | 77 | 4 | 6 | 158 | 54 | 203 | 1.80e-44 | 161 |
Msa1369100 | MtrunA17_Chr8g0372121 | 48.344 | 151 | 75 | 2 | 8 | 157 | 8 | 156 | 2.65e-44 | 158 |
Msa1369100 | MtrunA17_Chr7g0217721 | 42.541 | 181 | 86 | 3 | 5 | 169 | 18 | 196 | 5.19e-44 | 158 |
Msa1369100 | MtrunA17_Chr3g0091921 | 46.541 | 159 | 81 | 2 | 6 | 162 | 16 | 172 | 5.79e-44 | 157 |
Msa1369100 | MtrunA17_Chr4g0017921 | 48.701 | 154 | 69 | 3 | 8 | 157 | 10 | 157 | 6.02e-44 | 158 |
Msa1369100 | MtrunA17_Chr1g0200561 | 47.239 | 163 | 77 | 4 | 8 | 166 | 21 | 178 | 8.05e-44 | 158 |
Msa1369100 | MtrunA17_Chr4g0018391 | 41.341 | 179 | 95 | 5 | 8 | 183 | 9 | 180 | 3.54e-43 | 156 |
Msa1369100 | MtrunA17_Chr8g0361731 | 42.593 | 162 | 80 | 4 | 6 | 156 | 14 | 173 | 6.90e-43 | 156 |
Msa1369100 | MtrunA17_Chr6g0453451 | 43.023 | 172 | 90 | 3 | 5 | 172 | 19 | 186 | 7.15e-43 | 154 |
Msa1369100 | MtrunA17_Chr6g0453131 | 44.099 | 161 | 78 | 4 | 6 | 156 | 15 | 173 | 1.18e-42 | 155 |
Msa1369100 | MtrunA17_Chr6g0484441 | 46.358 | 151 | 77 | 2 | 6 | 156 | 5 | 151 | 2.27e-42 | 153 |
Msa1369100 | MtrunA17_Chr5g0398971 | 38.565 | 223 | 116 | 8 | 8 | 226 | 9 | 214 | 2.31e-42 | 154 |
Msa1369100 | MtrunA17_Chr2g0318081 | 40.909 | 176 | 99 | 2 | 1 | 173 | 11 | 184 | 3.28e-42 | 153 |
Msa1369100 | MtrunA17_Chr2g0316971 | 48.125 | 160 | 75 | 4 | 6 | 160 | 23 | 179 | 6.29e-42 | 153 |
Msa1369100 | MtrunA17_Chr5g0405211 | 46.104 | 154 | 74 | 3 | 8 | 157 | 10 | 158 | 9.78e-42 | 152 |
Msa1369100 | MtrunA17_Chr5g0417001 | 42.857 | 161 | 80 | 4 | 6 | 156 | 14 | 172 | 1.26e-41 | 153 |
Msa1369100 | MtrunA17_Chr8g0346001 | 42.945 | 163 | 77 | 3 | 8 | 157 | 17 | 176 | 1.71e-41 | 153 |
Msa1369100 | MtrunA17_Chr3g0124761 | 44.586 | 157 | 81 | 3 | 5 | 158 | 6 | 159 | 1.35e-40 | 147 |
Msa1369100 | MtrunA17_Chr4g0038751 | 49.673 | 153 | 67 | 3 | 7 | 156 | 16 | 161 | 3.00e-40 | 147 |
Msa1369100 | MtrunA17_Chr7g0253011 | 45.912 | 159 | 74 | 4 | 6 | 156 | 17 | 171 | 3.49e-40 | 149 |
Msa1369100 | MtrunA17_Chr2g0318101 | 41.146 | 192 | 93 | 6 | 4 | 182 | 13 | 197 | 4.10e-40 | 148 |
Msa1369100 | MtrunA17_Chr7g0217711 | 47.482 | 139 | 71 | 1 | 5 | 143 | 18 | 154 | 2.04e-39 | 140 |
Msa1369100 | MtrunA17_Chr6g0461661 | 44.872 | 156 | 78 | 4 | 6 | 156 | 18 | 170 | 2.10e-39 | 146 |
Msa1369100 | MtrunA17_Chr7g0252971 | 41.463 | 164 | 81 | 3 | 6 | 156 | 8 | 169 | 5.08e-39 | 144 |
Msa1369100 | MtrunA17_Chr3g0139331 | 42.767 | 159 | 85 | 3 | 6 | 162 | 11 | 165 | 5.91e-39 | 144 |
Msa1369100 | MtrunA17_Chr4g0042561 | 42.331 | 163 | 88 | 3 | 2 | 160 | 5 | 165 | 9.64e-39 | 142 |
Msa1369100 | MtrunA17_Chr3g0130731 | 42.038 | 157 | 85 | 3 | 5 | 158 | 6 | 159 | 1.76e-38 | 142 |
Msa1369100 | MtrunA17_Chr8g0359921 | 43.871 | 155 | 79 | 3 | 6 | 156 | 14 | 164 | 2.05e-38 | 142 |
Msa1369100 | MtrunA17_Chr7g0263931 | 41.212 | 165 | 88 | 4 | 5 | 163 | 10 | 171 | 5.11e-38 | 141 |
Msa1369100 | MtrunA17_Chr8g0384721 | 41.139 | 158 | 86 | 3 | 5 | 158 | 6 | 160 | 5.98e-38 | 140 |
Msa1369100 | MtrunA17_Chr5g0417791 | 43.312 | 157 | 83 | 3 | 5 | 157 | 2 | 156 | 1.06e-37 | 139 |
Msa1369100 | MtrunA17_Chr7g0214071 | 43.373 | 166 | 81 | 4 | 5 | 166 | 14 | 170 | 3.77e-37 | 137 |
Msa1369100 | MtrunA17_Chr4g0047841 | 48.485 | 132 | 64 | 2 | 4 | 133 | 13 | 142 | 7.18e-37 | 139 |
Msa1369100 | MtrunA17_Chr8g0345691 | 44.295 | 149 | 74 | 5 | 9 | 154 | 15 | 157 | 1.92e-36 | 139 |
Msa1369100 | MtrunA17_Chr2g0311651 | 40.606 | 165 | 82 | 3 | 7 | 156 | 23 | 186 | 2.19e-36 | 136 |
Msa1369100 | MtrunA17_Chr2g0326361 | 42.581 | 155 | 81 | 4 | 8 | 156 | 16 | 168 | 4.24e-36 | 136 |
Msa1369100 | MtrunA17_Chr2g0312321 | 42.767 | 159 | 82 | 4 | 1 | 156 | 6 | 158 | 4.96e-36 | 135 |
Msa1369100 | MtrunA17_Chr5g0442771 | 40.491 | 163 | 83 | 4 | 6 | 156 | 18 | 178 | 5.12e-36 | 135 |
Msa1369100 | MtrunA17_Chr1g0147421 | 42.857 | 154 | 81 | 4 | 6 | 156 | 27 | 176 | 4.81e-35 | 134 |
Msa1369100 | MtrunA17_Chr2g0311661 | 47.328 | 131 | 64 | 2 | 7 | 133 | 22 | 151 | 5.38e-35 | 132 |
Msa1369100 | MtrunA17_Chr3g0144271 | 45.985 | 137 | 69 | 3 | 6 | 139 | 23 | 157 | 1.01e-34 | 134 |
Msa1369100 | MtrunA17_Chr1g0183741 | 41.176 | 153 | 82 | 3 | 6 | 156 | 10 | 156 | 2.43e-34 | 130 |
Msa1369100 | MtrunA17_Chr8g0345671 | 43.243 | 148 | 75 | 5 | 9 | 153 | 14 | 155 | 2.88e-34 | 133 |
Msa1369100 | MtrunA17_Chr8g0345711 | 46.457 | 127 | 64 | 3 | 9 | 132 | 15 | 140 | 5.82e-34 | 125 |
Msa1369100 | MtrunA17_Chr7g0261411 | 40.789 | 152 | 82 | 3 | 6 | 155 | 10 | 155 | 1.79e-33 | 128 |
Msa1369100 | MtrunA17_Chr8g0385991 | 39.080 | 174 | 91 | 4 | 2 | 168 | 10 | 175 | 2.49e-33 | 125 |
Msa1369100 | MtrunA17_Chr8g0345741 | 48.276 | 116 | 56 | 3 | 19 | 131 | 4 | 118 | 1.99e-32 | 121 |
Msa1369100 | MtrunA17_Chr2g0321741 | 42.969 | 128 | 65 | 2 | 26 | 153 | 12 | 131 | 3.45e-32 | 126 |
Msa1369100 | MtrunA17_Chr8g0345721 | 40.123 | 162 | 61 | 5 | 9 | 135 | 38 | 198 | 3.90e-31 | 119 |
Msa1369100 | MtrunA17_Chr3g0131911 | 37.572 | 173 | 94 | 3 | 2 | 164 | 10 | 178 | 5.18e-31 | 120 |
Msa1369100 | MtrunA17_Chr8g0345731 | 43.846 | 130 | 66 | 4 | 9 | 132 | 27 | 155 | 1.39e-30 | 117 |
Msa1369100 | MtrunA17_Chr3g0113001 | 41.379 | 116 | 60 | 3 | 60 | 169 | 17 | 130 | 6.06e-28 | 113 |
Msa1369100 | MtrunA17_Chr2g0321631 | 36.478 | 159 | 93 | 6 | 8 | 158 | 6 | 164 | 1.22e-26 | 108 |
Msa1369100 | MtrunA17_Chr7g0266701 | 33.962 | 159 | 95 | 4 | 8 | 156 | 6 | 164 | 1.12e-25 | 105 |
Msa1369100 | MtrunA17_Chr8g0345701 | 39.007 | 141 | 66 | 5 | 9 | 132 | 10 | 147 | 6.52e-25 | 101 |
Msa1369100 | MtrunA17_Chr3g0113031 | 41.346 | 104 | 54 | 3 | 72 | 169 | 4 | 106 | 3.02e-24 | 102 |
Msa1369100 | MtrunA17_Chr4g0050701 | 36.250 | 160 | 84 | 5 | 6 | 157 | 11 | 160 | 1.08e-23 | 98.2 |
Msa1369100 | MtrunA17_Chr4g0026141 | 34.568 | 162 | 91 | 5 | 8 | 158 | 7 | 164 | 2.59e-23 | 99.4 |
Msa1369100 | MtrunA17_Chr7g0243371 | 51.282 | 78 | 34 | 2 | 60 | 133 | 14 | 91 | 4.09e-20 | 85.9 |
Msa1369100 | MtrunA17_Chr8g0384351 | 32.317 | 164 | 83 | 7 | 5 | 165 | 9 | 147 | 3.87e-17 | 79.3 |
Msa1369100 | MtrunA17_Chr3g0130321 | 31.818 | 176 | 99 | 7 | 5 | 167 | 6 | 173 | 3.33e-15 | 74.3 |
Msa1369100 | MtrunA17_Chr7g0251651 | 30.469 | 128 | 85 | 4 | 5 | 131 | 17 | 141 | 4.76e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369100 | AT5G09330.5 | 54.812 | 239 | 102 | 2 | 1 | 235 | 1 | 237 | 2.03e-85 | 271 |
Msa1369100 | AT5G09330.2 | 54.812 | 239 | 102 | 2 | 1 | 235 | 1 | 237 | 2.03e-85 | 271 |
Msa1369100 | AT5G09330.4 | 54.812 | 239 | 102 | 2 | 1 | 235 | 1 | 237 | 2.03e-85 | 271 |
Msa1369100 | AT5G09330.3 | 54.812 | 239 | 102 | 2 | 1 | 235 | 1 | 237 | 2.03e-85 | 271 |
Msa1369100 | AT5G09330.1 | 54.812 | 239 | 102 | 2 | 1 | 235 | 1 | 237 | 2.03e-85 | 271 |
Msa1369100 | AT5G64060.1 | 53.947 | 228 | 103 | 1 | 1 | 228 | 1 | 226 | 7.81e-81 | 255 |
Msa1369100 | AT5G04410.1 | 52.308 | 195 | 88 | 1 | 2 | 191 | 5 | 199 | 2.03e-70 | 234 |
Msa1369100 | AT3G10500.1 | 55.294 | 170 | 76 | 0 | 2 | 171 | 5 | 174 | 5.04e-68 | 228 |
Msa1369100 | AT3G10490.1 | 51.295 | 193 | 84 | 3 | 6 | 197 | 27 | 210 | 2.32e-64 | 209 |
Msa1369100 | AT3G10480.1 | 50.000 | 200 | 90 | 3 | 6 | 204 | 27 | 217 | 2.71e-63 | 213 |
Msa1369100 | AT3G10480.2 | 49.749 | 199 | 91 | 2 | 6 | 204 | 27 | 216 | 2.73e-63 | 213 |
Msa1369100 | AT3G10490.2 | 48.558 | 208 | 105 | 2 | 6 | 212 | 27 | 233 | 3.96e-63 | 212 |
Msa1369100 | AT1G34180.3 | 46.196 | 184 | 93 | 1 | 7 | 184 | 17 | 200 | 2.24e-57 | 197 |
Msa1369100 | AT3G10480.3 | 43.038 | 237 | 92 | 4 | 6 | 208 | 27 | 254 | 4.95e-57 | 198 |
Msa1369100 | AT1G34190.1 | 46.875 | 192 | 101 | 1 | 7 | 198 | 17 | 207 | 8.30e-57 | 198 |
Msa1369100 | AT1G34180.1 | 46.196 | 184 | 93 | 1 | 7 | 184 | 17 | 200 | 1.86e-56 | 197 |
Msa1369100 | AT3G17730.1 | 53.797 | 158 | 73 | 0 | 1 | 158 | 1 | 158 | 2.49e-55 | 185 |
Msa1369100 | AT1G34180.4 | 43.367 | 196 | 93 | 2 | 7 | 184 | 17 | 212 | 7.81e-54 | 187 |
Msa1369100 | AT1G34180.2 | 43.367 | 196 | 93 | 2 | 7 | 184 | 17 | 212 | 3.96e-53 | 188 |
Msa1369100 | AT1G65910.1 | 48.503 | 167 | 86 | 0 | 1 | 167 | 1 | 167 | 2.13e-51 | 185 |
Msa1369100 | AT1G33060.2 | 49.359 | 156 | 79 | 0 | 1 | 156 | 19 | 174 | 1.45e-50 | 183 |
Msa1369100 | AT1G33060.1 | 49.359 | 156 | 79 | 0 | 1 | 156 | 19 | 174 | 1.51e-50 | 182 |
Msa1369100 | AT2G27300.1 | 49.673 | 153 | 69 | 2 | 1 | 153 | 9 | 153 | 1.43e-49 | 173 |
Msa1369100 | AT5G24590.2 | 47.468 | 158 | 82 | 1 | 1 | 157 | 8 | 165 | 2.89e-48 | 172 |
Msa1369100 | AT3G03200.1 | 50.955 | 157 | 76 | 1 | 1 | 156 | 1 | 157 | 1.05e-47 | 172 |
Msa1369100 | AT3G49530.2 | 40.376 | 213 | 110 | 4 | 1 | 210 | 8 | 206 | 1.15e-47 | 170 |
Msa1369100 | AT3G49530.1 | 40.376 | 213 | 110 | 4 | 1 | 210 | 8 | 206 | 3.84e-47 | 170 |
Msa1369100 | AT5G61430.1 | 47.799 | 159 | 79 | 2 | 6 | 162 | 16 | 172 | 9.26e-47 | 166 |
Msa1369100 | AT5G17260.1 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 3.08e-46 | 167 |
Msa1369100 | AT1G54330.1 | 48.466 | 163 | 81 | 1 | 1 | 163 | 1 | 160 | 4.46e-46 | 162 |
Msa1369100 | AT5G46590.1 | 48.366 | 153 | 77 | 2 | 6 | 156 | 6 | 158 | 9.97e-46 | 161 |
Msa1369100 | AT4G10350.1 | 48.052 | 154 | 73 | 2 | 8 | 157 | 11 | 161 | 1.14e-45 | 163 |
Msa1369100 | AT4G17980.1 | 48.387 | 155 | 76 | 2 | 6 | 156 | 6 | 160 | 2.58e-45 | 159 |
Msa1369100 | AT1G71930.2 | 39.512 | 205 | 106 | 5 | 8 | 205 | 11 | 204 | 3.26e-45 | 161 |
Msa1369100 | AT1G71930.1 | 39.512 | 205 | 106 | 5 | 8 | 205 | 11 | 204 | 3.26e-45 | 161 |
Msa1369100 | AT4G17980.2 | 47.500 | 160 | 80 | 2 | 1 | 156 | 1 | 160 | 3.44e-45 | 160 |
Msa1369100 | AT4G35580.1 | 45.513 | 156 | 85 | 0 | 1 | 156 | 4 | 159 | 3.96e-45 | 165 |
Msa1369100 | AT4G35580.2 | 45.513 | 156 | 85 | 0 | 1 | 156 | 4 | 159 | 4.41e-45 | 166 |
Msa1369100 | AT4G35580.3 | 45.513 | 156 | 85 | 0 | 1 | 156 | 4 | 159 | 4.52e-45 | 166 |
Msa1369100 | AT1G12260.1 | 42.308 | 182 | 98 | 4 | 8 | 187 | 9 | 185 | 1.32e-44 | 161 |
Msa1369100 | AT1G32870.2 | 48.810 | 168 | 82 | 2 | 6 | 171 | 10 | 175 | 1.47e-44 | 164 |
Msa1369100 | AT1G12260.2 | 42.308 | 182 | 98 | 4 | 8 | 187 | 9 | 185 | 1.54e-44 | 160 |
Msa1369100 | AT1G32870.1 | 48.810 | 168 | 82 | 2 | 6 | 171 | 10 | 175 | 1.61e-44 | 164 |
Msa1369100 | AT5G22290.1 | 46.753 | 154 | 73 | 3 | 1 | 153 | 16 | 161 | 1.61e-44 | 160 |
Msa1369100 | AT5G39610.1 | 47.799 | 159 | 79 | 2 | 6 | 162 | 20 | 176 | 2.10e-44 | 158 |
Msa1369100 | AT3G44290.2 | 45.395 | 152 | 75 | 2 | 2 | 153 | 10 | 153 | 3.97e-44 | 155 |
Msa1369100 | AT1G32870.3 | 48.810 | 168 | 82 | 2 | 6 | 171 | 46 | 211 | 4.40e-44 | 163 |
Msa1369100 | AT5G46590.2 | 51.852 | 135 | 64 | 1 | 6 | 139 | 6 | 140 | 6.30e-44 | 156 |
Msa1369100 | AT1G62700.1 | 41.579 | 190 | 102 | 5 | 8 | 193 | 9 | 193 | 6.79e-44 | 159 |
Msa1369100 | AT1G62700.2 | 41.579 | 190 | 102 | 5 | 8 | 193 | 9 | 193 | 6.79e-44 | 159 |
Msa1369100 | AT5G07680.2 | 45.912 | 159 | 82 | 2 | 6 | 162 | 3 | 159 | 1.17e-43 | 157 |
Msa1369100 | AT5G07680.1 | 45.912 | 159 | 82 | 2 | 6 | 162 | 17 | 173 | 1.60e-43 | 157 |
Msa1369100 | AT2G02450.1 | 44.156 | 154 | 81 | 3 | 6 | 158 | 51 | 200 | 2.75e-43 | 157 |
Msa1369100 | AT3G44290.1 | 45.395 | 152 | 75 | 2 | 2 | 153 | 10 | 153 | 2.94e-43 | 156 |
Msa1369100 | AT2G02450.2 | 44.156 | 154 | 81 | 3 | 6 | 158 | 51 | 200 | 5.22e-43 | 157 |
Msa1369100 | AT4G36160.1 | 44.509 | 173 | 82 | 4 | 8 | 177 | 12 | 173 | 1.14e-42 | 155 |
Msa1369100 | AT4G36160.3 | 44.509 | 173 | 82 | 4 | 8 | 177 | 12 | 173 | 1.14e-42 | 155 |
Msa1369100 | AT1G33280.1 | 46.104 | 154 | 73 | 3 | 8 | 157 | 10 | 157 | 1.16e-42 | 154 |
Msa1369100 | AT4G36160.2 | 44.509 | 173 | 82 | 4 | 8 | 177 | 16 | 177 | 1.38e-42 | 155 |
Msa1369100 | AT1G69490.1 | 41.711 | 187 | 101 | 3 | 6 | 188 | 9 | 191 | 1.48e-42 | 152 |
Msa1369100 | AT1G32510.1 | 43.396 | 159 | 82 | 2 | 6 | 156 | 6 | 164 | 1.75e-42 | 152 |
Msa1369100 | AT2G18060.3 | 43.353 | 173 | 83 | 4 | 8 | 177 | 11 | 171 | 2.01e-42 | 155 |
Msa1369100 | AT2G18060.1 | 43.353 | 173 | 83 | 4 | 8 | 177 | 11 | 171 | 2.01e-42 | 155 |
Msa1369100 | AT1G79580.3 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 5.83e-42 | 154 |
Msa1369100 | AT1G79580.5 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 5.83e-42 | 154 |
Msa1369100 | AT1G79580.4 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 5.83e-42 | 154 |
Msa1369100 | AT1G79580.2 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 5.83e-42 | 154 |
Msa1369100 | AT1G79580.1 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 5.83e-42 | 154 |
Msa1369100 | AT3G12977.1 | 43.478 | 161 | 88 | 2 | 1 | 160 | 13 | 171 | 8.78e-42 | 150 |
Msa1369100 | AT3G29035.1 | 44.910 | 167 | 88 | 2 | 6 | 170 | 24 | 188 | 1.27e-41 | 151 |
Msa1369100 | AT1G26870.1 | 43.827 | 162 | 78 | 4 | 6 | 156 | 16 | 175 | 1.57e-41 | 154 |
Msa1369100 | AT5G62380.2 | 44.586 | 157 | 84 | 2 | 2 | 157 | 3 | 157 | 2.19e-41 | 151 |
Msa1369100 | AT5G62380.1 | 44.586 | 157 | 84 | 2 | 2 | 157 | 3 | 157 | 2.19e-41 | 151 |
Msa1369100 | AT5G39820.1 | 41.379 | 174 | 77 | 4 | 6 | 156 | 20 | 191 | 3.12e-41 | 150 |
Msa1369100 | AT2G24430.2 | 46.405 | 153 | 77 | 3 | 6 | 156 | 16 | 165 | 3.15e-41 | 150 |
Msa1369100 | AT2G24430.1 | 46.405 | 153 | 77 | 3 | 6 | 156 | 16 | 165 | 3.15e-41 | 150 |
Msa1369100 | AT5G66300.1 | 38.073 | 218 | 129 | 5 | 8 | 222 | 14 | 228 | 3.26e-41 | 149 |
Msa1369100 | AT3G04060.1 | 45.223 | 157 | 81 | 3 | 6 | 159 | 20 | 174 | 3.39e-41 | 150 |
Msa1369100 | AT5G08790.1 | 43.671 | 158 | 81 | 3 | 6 | 158 | 7 | 161 | 4.35e-41 | 149 |
Msa1369100 | AT5G18270.1 | 46.541 | 159 | 76 | 4 | 6 | 159 | 21 | 175 | 6.10e-41 | 150 |
Msa1369100 | AT3G18400.1 | 43.312 | 157 | 86 | 2 | 6 | 162 | 5 | 158 | 6.41e-41 | 149 |
Msa1369100 | AT5G18270.2 | 47.170 | 159 | 75 | 4 | 6 | 159 | 21 | 175 | 7.89e-41 | 149 |
Msa1369100 | AT1G01720.1 | 40.426 | 188 | 101 | 4 | 5 | 184 | 6 | 190 | 9.02e-41 | 148 |
Msa1369100 | AT4G27410.2 | 42.949 | 156 | 87 | 1 | 1 | 156 | 9 | 162 | 1.06e-40 | 148 |
Msa1369100 | AT2G43000.1 | 45.033 | 151 | 80 | 2 | 7 | 156 | 19 | 167 | 1.65e-40 | 147 |
Msa1369100 | AT1G76420.1 | 45.806 | 155 | 79 | 3 | 6 | 158 | 22 | 173 | 3.17e-40 | 148 |
Msa1369100 | AT2G46770.1 | 41.317 | 167 | 78 | 4 | 8 | 157 | 18 | 181 | 9.34e-40 | 147 |
Msa1369100 | AT1G52890.1 | 40.936 | 171 | 95 | 2 | 6 | 172 | 14 | 182 | 1.16e-39 | 146 |
Msa1369100 | AT5G53950.1 | 48.077 | 156 | 73 | 4 | 6 | 156 | 17 | 169 | 1.38e-39 | 147 |
Msa1369100 | AT3G15500.1 | 42.038 | 157 | 89 | 1 | 1 | 157 | 9 | 163 | 1.71e-39 | 145 |
Msa1369100 | AT3G15170.1 | 45.283 | 159 | 81 | 3 | 8 | 162 | 22 | 178 | 1.97e-39 | 145 |
Msa1369100 | AT3G61910.1 | 41.566 | 166 | 77 | 3 | 8 | 156 | 13 | 175 | 2.37e-39 | 145 |
Msa1369100 | AT1G77450.1 | 43.506 | 154 | 81 | 3 | 8 | 158 | 12 | 162 | 5.53e-39 | 142 |
Msa1369100 | AT2G17040.1 | 45.098 | 153 | 74 | 3 | 7 | 156 | 7 | 152 | 7.99e-39 | 142 |
Msa1369100 | AT4G27410.3 | 39.548 | 177 | 92 | 2 | 1 | 162 | 9 | 185 | 1.64e-38 | 143 |
Msa1369100 | AT1G32770.1 | 41.071 | 168 | 82 | 3 | 5 | 158 | 15 | 179 | 3.16e-38 | 143 |
Msa1369100 | AT5G63790.1 | 41.772 | 158 | 84 | 3 | 6 | 158 | 50 | 204 | 3.92e-38 | 142 |
Msa1369100 | AT5G63790.2 | 41.772 | 158 | 84 | 3 | 6 | 158 | 60 | 214 | 4.68e-38 | 142 |
Msa1369100 | AT1G56010.2 | 35.185 | 270 | 135 | 9 | 1 | 253 | 14 | 260 | 4.75e-38 | 142 |
Msa1369100 | AT1G61110.1 | 42.169 | 166 | 81 | 3 | 4 | 156 | 14 | 177 | 1.95e-37 | 140 |
Msa1369100 | AT5G13180.1 | 45.122 | 164 | 82 | 3 | 2 | 163 | 10 | 167 | 2.62e-37 | 138 |
Msa1369100 | AT3G15510.1 | 43.125 | 160 | 76 | 5 | 10 | 156 | 21 | 178 | 3.74e-36 | 137 |
Msa1369100 | AT5G04395.1 | 46.575 | 146 | 64 | 2 | 6 | 137 | 28 | 173 | 4.89e-36 | 132 |
Msa1369100 | AT3G04070.2 | 42.683 | 164 | 78 | 4 | 6 | 156 | 10 | 170 | 5.63e-36 | 137 |
Msa1369100 | AT4G01520.1 | 45.752 | 153 | 73 | 4 | 9 | 156 | 7 | 154 | 6.30e-35 | 132 |
Msa1369100 | AT2G33480.2 | 44.937 | 158 | 76 | 3 | 2 | 157 | 11 | 159 | 1.12e-34 | 131 |
Msa1369100 | AT2G33480.1 | 44.937 | 158 | 78 | 2 | 2 | 157 | 11 | 161 | 2.07e-34 | 130 |
Msa1369100 | AT4G01540.3 | 45.860 | 157 | 75 | 4 | 5 | 156 | 3 | 154 | 2.92e-34 | 134 |
Msa1369100 | AT3G04070.1 | 37.430 | 179 | 82 | 3 | 6 | 156 | 10 | 186 | 3.80e-34 | 132 |
Msa1369100 | AT4G01540.4 | 45.860 | 157 | 75 | 4 | 5 | 156 | 3 | 154 | 4.74e-34 | 132 |
Msa1369100 | AT4G01540.2 | 46.405 | 153 | 72 | 4 | 9 | 156 | 7 | 154 | 7.63e-34 | 132 |
Msa1369100 | AT4G01540.1 | 46.405 | 153 | 72 | 4 | 9 | 156 | 7 | 154 | 7.91e-34 | 133 |
Msa1369100 | AT3G12910.1 | 46.212 | 132 | 63 | 3 | 7 | 133 | 22 | 150 | 8.41e-33 | 127 |
Msa1369100 | AT4G28530.1 | 40.000 | 170 | 78 | 4 | 5 | 156 | 9 | 172 | 7.13e-32 | 125 |
Msa1369100 | AT3G12977.2 | 49.515 | 103 | 51 | 1 | 60 | 161 | 17 | 119 | 1.64e-31 | 121 |
Msa1369100 | AT5G61430.2 | 49.524 | 105 | 51 | 1 | 60 | 162 | 5 | 109 | 2.04e-31 | 122 |
Msa1369100 | AT3G10490.4 | 44.444 | 135 | 73 | 2 | 80 | 213 | 1 | 134 | 6.20e-31 | 123 |
Msa1369100 | AT3G10490.3 | 44.444 | 135 | 73 | 2 | 80 | 213 | 1 | 134 | 6.20e-31 | 123 |
Msa1369100 | AT4G01550.1 | 41.279 | 172 | 82 | 5 | 9 | 170 | 7 | 169 | 6.84e-31 | 125 |
Msa1369100 | AT1G52880.1 | 40.881 | 159 | 80 | 4 | 10 | 156 | 21 | 177 | 7.16e-31 | 122 |
Msa1369100 | AT4G10350.2 | 49.474 | 95 | 48 | 0 | 63 | 157 | 20 | 114 | 2.30e-29 | 117 |
Msa1369100 | AT1G56010.1 | 34.951 | 206 | 105 | 6 | 60 | 253 | 5 | 193 | 1.04e-26 | 108 |
Msa1369100 | AT3G44350.2 | 36.478 | 159 | 96 | 5 | 5 | 158 | 4 | 162 | 1.94e-24 | 102 |
Msa1369100 | AT5G22380.1 | 34.161 | 161 | 99 | 5 | 5 | 158 | 4 | 164 | 7.46e-24 | 100 |
Msa1369100 | AT3G44350.1 | 36.943 | 157 | 94 | 5 | 5 | 156 | 4 | 160 | 3.89e-23 | 96.3 |
Msa1369100 | AT1G02230.1 | 37.333 | 150 | 82 | 5 | 9 | 153 | 6 | 148 | 1.11e-22 | 99.8 |
Msa1369100 | AT3G04420.2 | 36.667 | 150 | 88 | 3 | 9 | 156 | 6 | 150 | 6.08e-22 | 96.3 |
Msa1369100 | AT3G04420.1 | 36.667 | 150 | 88 | 3 | 9 | 156 | 6 | 150 | 2.93e-21 | 95.5 |
Msa1369100 | AT2G33480.3 | 46.316 | 95 | 51 | 0 | 63 | 157 | 10 | 104 | 3.23e-21 | 92.4 |
Msa1369100 | AT1G02250.1 | 37.984 | 129 | 72 | 3 | 9 | 132 | 6 | 131 | 1.94e-20 | 93.2 |
Msa1369100 | AT5G64530.1 | 40.152 | 132 | 63 | 5 | 6 | 135 | 3 | 120 | 8.58e-19 | 84.7 |
Msa1369100 | AT5G64530.2 | 40.152 | 132 | 63 | 5 | 6 | 135 | 3 | 120 | 1.71e-18 | 83.2 |
Msa1369100 | AT2G18060.2 | 41.758 | 91 | 43 | 2 | 87 | 177 | 3 | 83 | 7.84e-18 | 84.0 |
Msa1369100 | AT1G02220.1 | 33.108 | 148 | 89 | 4 | 9 | 154 | 6 | 145 | 8.74e-18 | 85.5 |
Msa1369100 | AT4G28530.2 | 35.878 | 131 | 64 | 3 | 5 | 117 | 9 | 137 | 5.93e-17 | 82.0 |
Msa1369100 | AT2G43000.2 | 39.535 | 86 | 51 | 1 | 72 | 156 | 4 | 89 | 5.24e-16 | 77.0 |
Msa1369100 | AT5G22290.2 | 43.478 | 69 | 31 | 2 | 86 | 153 | 1 | 62 | 6.94e-16 | 77.8 |
Msa1369100 | AT1G01010.1 | 33.333 | 156 | 85 | 6 | 9 | 153 | 6 | 153 | 1.61e-15 | 79.0 |
Msa1369100 | AT3G56530.1 | 30.872 | 149 | 98 | 3 | 8 | 154 | 54 | 199 | 1.50e-14 | 75.1 |
Msa1369100 | AT3G04430.1 | 31.159 | 138 | 71 | 6 | 12 | 132 | 6 | 136 | 5.41e-12 | 65.5 |
Find 174 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTCGAAATAAATAAATTTA+TGG | 0.150624 | tig0018755:+31849 | Msa1369100:exon |
AATCATTCGATCTCCGATTT+AGG | 0.156160 | tig0018755:+29035 | Msa1369100:five_prime_UTR |
TTATTTCGACTCCAACTTTC+AGG | 0.173690 | tig0018755:-31837 | None:intergenic |
ATGAAACGAGCTACGGAAAT+TGG | 0.193778 | tig0018755:+29749 | Msa1369100:CDS |
TTTGATGGCTATACCTAAAT+TGG | 0.207613 | tig0018755:+29415 | Msa1369100:exon |
CGAAATCCAGGTACCAATTT+AGG | 0.218874 | tig0018755:-29428 | None:intergenic |
GATTCAGTCGTTGGCTCTTT+TGG | 0.238821 | tig0018755:+31928 | Msa1369100:three_prime_UTR |
CGTGGATTGCTCGTCTGATT+TGG | 0.251020 | tig0018755:+31686 | Msa1369100:CDS |
GAAAGACTCATTGTTTGAAT+TGG | 0.255251 | tig0018755:+31952 | Msa1369100:three_prime_UTR |
CCTGTTTGACATGAATTTAC+TGG | 0.262201 | tig0018755:-30988 | None:intergenic |
TTTATAATCACTATTACTAT+TGG | 0.268107 | tig0018755:+32128 | Msa1369100:three_prime_UTR |
CCTAGGAATGGTGCACAATA+TGG | 0.269913 | tig0018755:+30646 | Msa1369100:CDS |
CCTGTTTGACATGGATTTGC+AGG | 0.278572 | tig0018755:-30901 | None:intergenic |
TTATCTCCAAAACGGGGATT+TGG | 0.288256 | tig0018755:+29676 | Msa1369100:CDS |
TTATAATCACTATTACTATT+GGG | 0.294360 | tig0018755:+32129 | Msa1369100:three_prime_UTR |
TGTTATTGAATTTGATTTGA+TGG | 0.304787 | tig0018755:+29400 | Msa1369100:exon |
CTCCAAACTAGTGGATATAT+TGG | 0.305281 | tig0018755:+30790 | Msa1369100:CDS |
TCATTAACAGTTTGATTGTC+TGG | 0.311175 | tig0018755:-31327 | None:intergenic |
CTCCAGTCTTCCTCATTAAA+TGG | 0.323348 | tig0018755:-30673 | None:intergenic |
ATTAGATGTCACAGGCAAAC+TGG | 0.327321 | tig0018755:-30743 | None:intergenic |
TCAAAATCGTCTTTCGTCAT+TGG | 0.330957 | tig0018755:+29157 | Msa1369100:five_prime_UTR |
ATCATTCGATCTCCGATTTA+GGG | 0.332550 | tig0018755:+29036 | Msa1369100:five_prime_UTR |
AACCAATATATCCACTAGTT+TGG | 0.339769 | tig0018755:-30792 | None:intergenic |
CTTGCGAGTTCATGTCAAAT+AGG | 0.339836 | tig0018755:+31156 | Msa1369100:CDS |
GTGGATTGCTCGTCTGATTT+GGG | 0.344683 | tig0018755:+31687 | Msa1369100:CDS |
GAGCTACGGAAATTGGGTTT+TGG | 0.345895 | tig0018755:+29756 | Msa1369100:CDS |
ATCAGAATTGGCGCCTTCTC+TGG | 0.347156 | tig0018755:+30834 | Msa1369100:CDS |
TCCGTAGCTCGTTTCATCCT+TGG | 0.348857 | tig0018755:-29743 | None:intergenic |
CTTCTATACTTCTTCTCAAT+AGG | 0.349880 | tig0018755:-29716 | None:intergenic |
CCTTCAAATTCTTGTCAAAC+AGG | 0.351866 | tig0018755:+31030 | Msa1369100:CDS |
TGTCCCTTTAGAACCTTGTT+TGG | 0.354330 | tig0018755:+32158 | Msa1369100:three_prime_UTR |
TGATTAAATACTTTCTTAAG+AGG | 0.359307 | tig0018755:+29474 | Msa1369100:CDS |
TCTGTTTGACATGAATTTGC+AGG | 0.364697 | tig0018755:-31114 | None:intergenic |
AAAGACTCATTGTTTGAATT+GGG | 0.372414 | tig0018755:+31953 | Msa1369100:three_prime_UTR |
AATTATCTTATCTCCAAAAC+GGG | 0.377898 | tig0018755:+29669 | Msa1369100:CDS |
ACCACTCCAAATCCCCGTTT+TGG | 0.379266 | tig0018755:-29682 | None:intergenic |
TGACAAGAATTTGAAGGGTC+TGG | 0.381024 | tig0018755:-31024 | None:intergenic |
TGGCTTCTACGGATAATGTT+GGG | 0.381297 | tig0018755:+31748 | Msa1369100:CDS |
GCATGACGACTTCGATTTCA+TGG | 0.381469 | tig0018755:+31773 | Msa1369100:CDS |
TGACATGAATTTACTGGGTC+AGG | 0.384474 | tig0018755:-30982 | None:intergenic |
CTATTGCTGTTGTGCTGGCT+TGG | 0.386703 | tig0018755:+31901 | Msa1369100:three_prime_UTR |
TCTGGATATGAATCATTTGC+AGG | 0.389690 | tig0018755:-31198 | None:intergenic |
TCTGGATATGAATCATTTGC+AGG | 0.389690 | tig0018755:-31309 | None:intergenic |
TCGTTAACAGCTTGATTGTC+TGG | 0.392462 | tig0018755:-31216 | None:intergenic |
GTCGAAATAAATAAATTTAT+GGG | 0.392754 | tig0018755:+31850 | Msa1369100:exon |
TGACAAGAATTCACAGGGTC+TGG | 0.397096 | tig0018755:-31066 | None:intergenic |
CCTGTGAATTCTTGTCAAAC+AGG | 0.404297 | tig0018755:+31072 | Msa1369100:CDS |
TGACATGGATTTGCAGGGTC+AGG | 0.408876 | tig0018755:-30895 | None:intergenic |
CCTGTGAATCCTTGTCAAAC+AGG | 0.414356 | tig0018755:+30943 | Msa1369100:CDS |
CCAGTAAATTCATGTCAAAC+AGG | 0.414815 | tig0018755:+30988 | Msa1369100:CDS |
TCGACTCCAACTTTCAGGTT+GGG | 0.415732 | tig0018755:-31832 | None:intergenic |
CCTGTTTGACAAGAATTTGA+AGG | 0.420779 | tig0018755:-31030 | None:intergenic |
TGACAAGGATTCACAGGGTC+TGG | 0.422865 | tig0018755:-30937 | None:intergenic |
TTATGAACCTTGGCAGACTT+TGG | 0.423046 | tig0018755:+29127 | Msa1369100:five_prime_UTR |
CTGTTTGACATGAATTTGTT+GGG | 0.425559 | tig0018755:-30858 | None:intergenic |
CACACACGGGCTGGCTTCTA+CGG | 0.427354 | tig0018755:+31737 | Msa1369100:CDS |
TGACATGAACTCGCAAGGTC+AGG | 0.427713 | tig0018755:-31150 | None:intergenic |
CCAACAAATTCATGTCAAAC+AGG | 0.430400 | tig0018755:+30859 | Msa1369100:CDS |
CCTGTTTGACATGAATTTGT+TGG | 0.430797 | tig0018755:-30859 | None:intergenic |
GAATTATCTTATCTCCAAAA+CGG | 0.437695 | tig0018755:+29668 | Msa1369100:intron |
TTGTCCAAACAAGGTTCTAA+AGG | 0.439194 | tig0018755:-32162 | None:intergenic |
ATATATACAAATACGCTCCT+TGG | 0.443195 | tig0018755:+29543 | Msa1369100:CDS |
TGAAACGAGCTACGGAAATT+GGG | 0.444296 | tig0018755:+29750 | Msa1369100:CDS |
CCTGCAAATCCATGTCAAAC+AGG | 0.444856 | tig0018755:+30901 | Msa1369100:CDS |
CTGTTTGACATGAATTTACT+GGG | 0.445135 | tig0018755:-30987 | None:intergenic |
GGCTGACAAAGGAATTGTTC+AGG | 0.445801 | tig0018755:+29925 | Msa1369100:CDS |
CCATATTGTGCACCATTCCT+AGG | 0.447789 | tig0018755:-30646 | None:intergenic |
GGATTTCGATTCTCTCCAAC+GGG | 0.448332 | tig0018755:+29443 | Msa1369100:CDS |
TTGCTGTTGTGCTGGCTTGG+AGG | 0.449846 | tig0018755:+31904 | Msa1369100:three_prime_UTR |
GTGTGCTAAAGTCTGCATTC+TGG | 0.450394 | tig0018755:-31719 | None:intergenic |
CTTGGAGGTGATTCAGTCGT+TGG | 0.450846 | tig0018755:+31919 | Msa1369100:three_prime_UTR |
ATCTAGACTCTGATACGTTC+TGG | 0.454030 | tig0018755:+31805 | Msa1369100:CDS |
CATACCGTGTCAATCAGAAT+TGG | 0.460006 | tig0018755:+30822 | Msa1369100:CDS |
TGAGTATAGGCTTGAAGATA+AGG | 0.460176 | tig0018755:+29898 | Msa1369100:CDS |
AAGACAGCGAAAACATAAAT+CGG | 0.462830 | tig0018755:-29005 | None:intergenic |
GTCATCGGCAAACCCTAAAT+CGG | 0.463051 | tig0018755:-29048 | None:intergenic |
TGTCCAAACAAGGTTCTAAA+GGG | 0.463866 | tig0018755:-32161 | None:intergenic |
GAATTCACAGGGTCTGGATA+AGG | 0.466095 | tig0018755:-31060 | None:intergenic |
GGATTCACAGGGTCTGGATA+AGG | 0.468391 | tig0018755:-30931 | None:intergenic |
TATGAATCATTTGCAGGGTC+GGG | 0.476385 | tig0018755:-31303 | None:intergenic |
CTAGGAATGGTGCACAATAT+GGG | 0.477134 | tig0018755:+30647 | Msa1369100:CDS |
CTTTCTTAAGAGGAAAGTGT+TGG | 0.477525 | tig0018755:+29484 | Msa1369100:CDS |
TATGAATCATTTGCAGGGTC+GGG | 0.478405 | tig0018755:-31192 | None:intergenic |
TCATTTGCAGGGTCGGGCGC+AGG | 0.479506 | tig0018755:-31297 | None:intergenic |
ATTGGGTTATGCATGAGTAT+AGG | 0.479985 | tig0018755:+29885 | Msa1369100:CDS |
GAATTTGCAGGGTCGGAAGC+AGG | 0.480953 | tig0018755:-31102 | None:intergenic |
CTGGCTTCTACGGATAATGT+TGG | 0.482593 | tig0018755:+31747 | Msa1369100:CDS |
TTCGACTCCAACTTTCAGGT+TGG | 0.483370 | tig0018755:-31833 | None:intergenic |
TTTCTTAAGAGGAAAGTGTT+GGG | 0.484499 | tig0018755:+29485 | Msa1369100:CDS |
CCTGTTTGACAAGGATTCAC+AGG | 0.487590 | tig0018755:-30943 | None:intergenic |
GAGCACTATTGCTGTTGTGC+TGG | 0.491629 | tig0018755:+31896 | Msa1369100:three_prime_UTR |
GACCATTTAATGAGGAAGAC+TGG | 0.495616 | tig0018755:+30671 | Msa1369100:CDS |
TCGTGGTGATCGAACCGATT+GGG | 0.500477 | tig0018755:+29868 | Msa1369100:CDS |
GGCAGACCCAACCTGAAAGT+TGG | 0.501795 | tig0018755:+31826 | Msa1369100:CDS |
GTGAATAAACACGCTCTTGG+TGG | 0.502131 | tig0018755:+32077 | Msa1369100:three_prime_UTR |
CGTTCTTGCTTTATGAACCT+TGG | 0.503227 | tig0018755:+29117 | Msa1369100:five_prime_UTR |
CCTGTTTGACAAGAATTCAC+AGG | 0.507170 | tig0018755:-31072 | None:intergenic |
TATATACAAATACGCTCCTT+GGG | 0.512611 | tig0018755:+29544 | Msa1369100:CDS |
AGTGCAGCAGATTCAGCAAA+AGG | 0.512913 | tig0018755:-30715 | None:intergenic |
AGACTTTAGCACACACGGGC+TGG | 0.515131 | tig0018755:+31728 | Msa1369100:CDS |
GGCTTCTACGGATAATGTTG+GGG | 0.515439 | tig0018755:+31749 | Msa1369100:CDS |
TCGTCTGATTTGGGATCTGT+TGG | 0.516876 | tig0018755:+31696 | Msa1369100:CDS |
TATAATCACTATTACTATTG+GGG | 0.519775 | tig0018755:+32130 | Msa1369100:three_prime_UTR |
CAATTCTGATTGACACGGTA+TGG | 0.524497 | tig0018755:-30821 | None:intergenic |
ATTGTGAATAAACACGCTCT+TGG | 0.529790 | tig0018755:+32074 | Msa1369100:three_prime_UTR |
CTGTTTGACATGAATTTGCA+GGG | 0.530109 | tig0018755:-31113 | None:intergenic |
CTCGTGGTGATCGAACCGAT+TGG | 0.531457 | tig0018755:+29867 | Msa1369100:CDS |
ATATGAATCATTTGCAGGGT+CGG | 0.532792 | tig0018755:-31304 | None:intergenic |
GAATTTGTTGGGTCCAGAGA+AGG | 0.534027 | tig0018755:-30847 | None:intergenic |
ATATGAATCATTTGCAGGGT+CGG | 0.534812 | tig0018755:-31193 | None:intergenic |
GGATTCCTACGTAATCTGTA+AGG | 0.535028 | tig0018755:+30600 | Msa1369100:intron |
CTGTTTGACAAGAATTTGAA+GGG | 0.535613 | tig0018755:-31029 | None:intergenic |
TCATTTGCAGGGTCGGGCAA+AGG | 0.536379 | tig0018755:-31186 | None:intergenic |
AAAGCAAGAACGGTGGCGAA+CGG | 0.541820 | tig0018755:-29106 | None:intergenic |
TTGAGAAGGTATAGAGTCAT+CGG | 0.542248 | tig0018755:-29063 | None:intergenic |
GACATGAACTCGCAAGGTCA+GGG | 0.545876 | tig0018755:-31149 | None:intergenic |
CTGTTTGACATGGATTTGCA+GGG | 0.546270 | tig0018755:-30900 | None:intergenic |
GATCAGAATCTCCAAACTAG+TGG | 0.547413 | tig0018755:+30781 | Msa1369100:CDS |
TAGGCTTGAAGATAAGGACT+TGG | 0.547580 | tig0018755:+29904 | Msa1369100:CDS |
CAACAGAATAATCAAACGGT+GGG | 0.550179 | tig0018755:+29806 | Msa1369100:CDS |
ATACTCATGCATAACCCAAT+CGG | 0.550912 | tig0018755:-29882 | None:intergenic |
TTTCTGAGATACGAGGATTG+AGG | 0.552278 | tig0018755:+29306 | Msa1369100:five_prime_UTR |
GAATTTGAAGGGTCTGGAGA+AGG | 0.554806 | tig0018755:-31018 | None:intergenic |
TTGACATGAATTTGCAGGGT+CGG | 0.556895 | tig0018755:-31109 | None:intergenic |
GCTATACCTAAATTGGTACC+TGG | 0.560520 | tig0018755:+29422 | Msa1369100:CDS |
GGCATAAATCCTGTTTGACA+TGG | 0.562278 | tig0018755:-30910 | None:intergenic |
GACTGGAGTGATGATGAAGT+AGG | 0.564465 | tig0018755:+30688 | Msa1369100:CDS |
TTAATCAATTCAACTCCCGT+TGG | 0.567688 | tig0018755:-29458 | None:intergenic |
GGATTTGCAGGGTCAGGAGA+AGG | 0.569179 | tig0018755:-30889 | None:intergenic |
TTAGATGTCACAGGCAAACT+GGG | 0.572296 | tig0018755:-30742 | None:intergenic |
GATAAGGACTTGGCTGACAA+AGG | 0.573980 | tig0018755:+29914 | Msa1369100:CDS |
GTTGGAGAGAATCGAAATCC+AGG | 0.580453 | tig0018755:-29440 | None:intergenic |
GAATTTACTGGGTCAGGAGA+CGG | 0.590897 | tig0018755:-30976 | None:intergenic |
GAAGGTCCTGGTCCTAGGAA+TGG | 0.591114 | tig0018755:+30634 | Msa1369100:CDS |
CTGTTTGACAAGAATTCACA+GGG | 0.591836 | tig0018755:-31071 | None:intergenic |
CTGTTTGACAAGGATTCACA+GGG | 0.595085 | tig0018755:-30942 | None:intergenic |
AGAAGTATAGAAGTGGGCCA+AGG | 0.595153 | tig0018755:+29726 | Msa1369100:CDS |
TGGATTTCGATTCTCTCCAA+CGG | 0.596015 | tig0018755:+29442 | Msa1369100:CDS |
ATTGAGAAGAAGTATAGAAG+TGG | 0.596690 | tig0018755:+29719 | Msa1369100:CDS |
TACGCTCCTTGGGATCTCCC+AGG | 0.603024 | tig0018755:+29554 | Msa1369100:CDS |
AAACTACCTGGGAGATCCCA+AGG | 0.605145 | tig0018755:-29560 | None:intergenic |
CAAGGTTCATAAAGCAAGAA+CGG | 0.608438 | tig0018755:-29116 | None:intergenic |
TGTTCAACAGAATAATCAAA+CGG | 0.610587 | tig0018755:+29802 | Msa1369100:CDS |
CTATTTGACATGAACTCGCA+AGG | 0.614626 | tig0018755:-31155 | None:intergenic |
ACAGAACTATTAGATGTCAC+AGG | 0.615324 | tig0018755:-30751 | None:intergenic |
CTGGATATGAATCATTTGCA+GGG | 0.618285 | tig0018755:-31197 | None:intergenic |
CTGGATATGAATCATTTGCA+GGG | 0.618285 | tig0018755:-31308 | None:intergenic |
AATGCAGACTTTAGCACACA+CGG | 0.626353 | tig0018755:+31723 | Msa1369100:CDS |
ATAAATCCTCCTGTTTGACA+AGG | 0.629631 | tig0018755:-30952 | None:intergenic |
AAAACCCTAATATTTCACAC+TGG | 0.629779 | tig0018755:+29836 | Msa1369100:CDS |
GCCAAGGATGAAACGAGCTA+CGG | 0.632310 | tig0018755:+29742 | Msa1369100:CDS |
GCTTCTACGGATAATGTTGG+GGG | 0.634265 | tig0018755:+31750 | Msa1369100:CDS |
TGTGCACCATTCCTAGGACC+AGG | 0.638891 | tig0018755:-30640 | None:intergenic |
TCCAAAACGGGGATTTGGAG+TGG | 0.639502 | tig0018755:+29681 | Msa1369100:CDS |
ATTCAATCAAATCACAACTG+AGG | 0.639509 | tig0018755:-29356 | None:intergenic |
ACATGAACTCGCAAGGTCAG+GGG | 0.640717 | tig0018755:-31148 | None:intergenic |
TTGAGAAGAAGTATAGAAGT+GGG | 0.641662 | tig0018755:+29720 | Msa1369100:CDS |
ATATGGGAGACCATTTAATG+AGG | 0.644918 | tig0018755:+30663 | Msa1369100:CDS |
AAGAACACCAAAGTCTGCCA+AGG | 0.647439 | tig0018755:-29134 | None:intergenic |
GTGAATCCTTGTCAAACAGG+AGG | 0.649506 | tig0018755:+30946 | Msa1369100:CDS |
AACAGAATAATCAAACGGTG+GGG | 0.675165 | tig0018755:+29807 | Msa1369100:CDS |
AGACAACAGCGTATTGCCTG+AGG | 0.675168 | tig0018755:+31386 | Msa1369100:CDS |
AAATACCTTACAGATTACGT+AGG | 0.675415 | tig0018755:-30605 | None:intergenic |
GAACTCGCAAGGTCAGGGGA+CGG | 0.679790 | tig0018755:-31144 | None:intergenic |
TCAACAGAATAATCAAACGG+TGG | 0.680625 | tig0018755:+29805 | Msa1369100:CDS |
ATGCAGACTTTAGCACACAC+GGG | 0.691963 | tig0018755:+31724 | Msa1369100:CDS |
TGTCAGGAAAACATTGCTGA+AGG | 0.693858 | tig0018755:+31627 | Msa1369100:intron |
CTTCTACGGATAATGTTGGG+GGG | 0.698500 | tig0018755:+31751 | Msa1369100:CDS |
ATTATCTTATCTCCAAAACG+GGG | 0.700642 | tig0018755:+29670 | Msa1369100:CDS |
GGCGCCAATTCTGATTGACA+CGG | 0.715605 | tig0018755:-30826 | None:intergenic |
CACACTGGAAAATCACCTCG+TGG | 0.720810 | tig0018755:+29851 | Msa1369100:CDS |
TGCTCTTCGAAAATATCACG+CGG | 0.729818 | tig0018755:-31878 | None:intergenic |
GGTTCATAAAGCAAGAACGG+TGG | 0.736733 | tig0018755:-29113 | None:intergenic |
CAATCGGTTCGATCACCACG+AGG | 0.739524 | tig0018755:-29866 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGATCAATTTTCAATTTTA+GGG | + | tig0018755:29182-29201 | Msa1369100:five_prime_UTR | 15.0% |
!! | AATAACATAATTCTATTTCA+AGG | - | tig0018755:30336-30355 | None:intergenic | 15.0% |
!!! | ATAGAATTATGTTATTTCAT+TGG | + | tig0018755:30340-30359 | Msa1369100:intron | 15.0% |
!! | AAATAATTAAAAGAAAGCAA+GGG | - | tig0018755:30517-30536 | None:intergenic | 15.0% |
!! | AGTCGAAATAAATAAATTTA+TGG | + | tig0018755:31849-31868 | Msa1369100:exon | 15.0% |
!! | GTCGAAATAAATAAATTTAT+GGG | + | tig0018755:31850-31869 | Msa1369100:exon | 15.0% |
!!! | ACTTCAGTTATTATTTTATT+AGG | - | tig0018755:32001-32020 | None:intergenic | 15.0% |
!! | TTTATAATCACTATTACTAT+TGG | + | tig0018755:32128-32147 | Msa1369100:three_prime_UTR | 15.0% |
!! | TTATAATCACTATTACTATT+GGG | + | tig0018755:32129-32148 | Msa1369100:three_prime_UTR | 15.0% |
!!! | CTTGATCAATTTTCAATTTT+AGG | + | tig0018755:29181-29200 | Msa1369100:five_prime_UTR | 20.0% |
!!! | TGTTATTGAATTTGATTTGA+TGG | + | tig0018755:29400-29419 | Msa1369100:exon | 20.0% |
!! | TGATTAAATACTTTCTTAAG+AGG | + | tig0018755:29474-29493 | Msa1369100:CDS | 20.0% |
!!! | TTTTTTTCACCAATTTAGTA+TGG | + | tig0018755:29580-29599 | Msa1369100:intron | 20.0% |
!! | AGTAAAAAATGCACTTTATA+AGG | - | tig0018755:30393-30412 | None:intergenic | 20.0% |
!! | CAAATAATTAAAAGAAAGCA+AGG | - | tig0018755:30518-30537 | None:intergenic | 20.0% |
!! | TATAATCACTATTACTATTG+GGG | + | tig0018755:32130-32149 | Msa1369100:three_prime_UTR | 20.0% |
! | GAAAAAACACCATACTAAAT+TGG | - | tig0018755:29592-29611 | None:intergenic | 25.0% |
!!! | ATTTAGTATGGTGTTTTTTC+AGG | + | tig0018755:29592-29611 | Msa1369100:intron | 25.0% |
! | GAATTATCTTATCTCCAAAA+CGG | + | tig0018755:29668-29687 | Msa1369100:intron | 25.0% |
! | AATTATCTTATCTCCAAAAC+GGG | + | tig0018755:29669-29688 | Msa1369100:CDS | 25.0% |
! | TGTTCAACAGAATAATCAAA+CGG | + | tig0018755:29802-29821 | Msa1369100:CDS | 25.0% |
!! | TTTTCCAGTGTGAAATATTA+GGG | - | tig0018755:29843-29862 | None:intergenic | 25.0% |
!! | ATTTTCCAGTGTGAAATATT+AGG | - | tig0018755:29844-29863 | None:intergenic | 25.0% |
!!! | TGTTTTGTATGAGCTTTATA+TGG | + | tig0018755:29967-29986 | Msa1369100:intron | 25.0% |
! | ATATGGAGATATATGTGTAT+TGG | + | tig0018755:29984-30003 | Msa1369100:intron | 25.0% |
!!! | ATGTTTTTAACAAGTTCTCT+TGG | + | tig0018755:30570-30589 | Msa1369100:intron | 25.0% |
!! | TGTAAGGTATTTCAAAAAGA+AGG | + | tig0018755:30616-30635 | Msa1369100:CDS | 25.0% |
! | TGATGTTTCTTTATTATGTC+TGG | + | tig0018755:31461-31480 | Msa1369100:intron | 25.0% |
! | AAAATGGCATTAACATTATG+AGG | - | tig0018755:31538-31557 | None:intergenic | 25.0% |
! | ATCGCTATGATTTAGTAAAA+TGG | - | tig0018755:31554-31573 | None:intergenic | 25.0% |
! | AAAGACTCATTGTTTGAATT+GGG | + | tig0018755:31953-31972 | Msa1369100:three_prime_UTR | 25.0% |
!! | TTTTCTCAGACAATTATCAA+AGG | - | tig0018755:32055-32074 | None:intergenic | 25.0% |
AAGACAGCGAAAACATAAAT+CGG | - | tig0018755:29008-29027 | None:intergenic | 30.0% | |
ATTCAATCAAATCACAACTG+AGG | - | tig0018755:29359-29378 | None:intergenic | 30.0% | |
! | TTTGATGGCTATACCTAAAT+TGG | + | tig0018755:29415-29434 | Msa1369100:exon | 30.0% |
!! | TTTCTTAAGAGGAAAGTGTT+GGG | + | tig0018755:29485-29504 | Msa1369100:CDS | 30.0% |
ATATATACAAATACGCTCCT+TGG | + | tig0018755:29543-29562 | Msa1369100:CDS | 30.0% | |
TATATACAAATACGCTCCTT+GGG | + | tig0018755:29544-29563 | Msa1369100:CDS | 30.0% | |
ATTGGTGAAAAAAACTACCT+GGG | - | tig0018755:29574-29593 | None:intergenic | 30.0% | |
AATTGGTGAAAAAAACTACC+TGG | - | tig0018755:29575-29594 | None:intergenic | 30.0% | |
ATTATCTTATCTCCAAAACG+GGG | + | tig0018755:29670-29689 | Msa1369100:CDS | 30.0% | |
CTTCTATACTTCTTCTCAAT+AGG | - | tig0018755:29719-29738 | None:intergenic | 30.0% | |
! | ATTGAGAAGAAGTATAGAAG+TGG | + | tig0018755:29719-29738 | Msa1369100:CDS | 30.0% |
! | TTGAGAAGAAGTATAGAAGT+GGG | + | tig0018755:29720-29739 | Msa1369100:CDS | 30.0% |
AAAACCCTAATATTTCACAC+TGG | + | tig0018755:29836-29855 | Msa1369100:CDS | 30.0% | |
TCTTATCTGTTACATTGGAA+AGG | - | tig0018755:30120-30139 | None:intergenic | 30.0% | |
AAAGTAGTTGTGTCCTTTAA+TGG | - | tig0018755:30210-30229 | None:intergenic | 30.0% | |
ACACAACTACTTTAAATGCT+AGG | + | tig0018755:30217-30236 | Msa1369100:intron | 30.0% | |
CACAACTACTTTAAATGCTA+GGG | + | tig0018755:30218-30237 | Msa1369100:intron | 30.0% | |
TACTTTAAATGCTAGGGTTA+GGG | + | tig0018755:30224-30243 | Msa1369100:intron | 30.0% | |
AACATATTCACAACGAGAAT+AGG | - | tig0018755:30555-30574 | None:intergenic | 30.0% | |
AAATACCTTACAGATTACGT+AGG | - | tig0018755:30608-30627 | None:intergenic | 30.0% | |
AACCAATATATCCACTAGTT+TGG | - | tig0018755:30795-30814 | None:intergenic | 30.0% | |
! | CTGTTTGACATGAATTTGTT+GGG | - | tig0018755:30861-30880 | None:intergenic | 30.0% |
CTGTTTGACATGAATTTACT+GGG | - | tig0018755:30990-31009 | None:intergenic | 30.0% | |
CTGTTTGACAAGAATTTGAA+GGG | - | tig0018755:31032-31051 | None:intergenic | 30.0% | |
TCATTAACAGTTTGATTGTC+TGG | - | tig0018755:31330-31349 | None:intergenic | 30.0% | |
! | TCTTTCTACTTGTGTTTTTC+TGG | + | tig0018755:31430-31449 | Msa1369100:intron | 30.0% |
TATAGTCCTTGATTTCTTGA+AGG | + | tig0018755:31577-31596 | Msa1369100:intron | 30.0% | |
AGTTATCCTTCAAGAAATCA+AGG | - | tig0018755:31586-31605 | None:intergenic | 30.0% | |
!! | CTGAGTGTTGACATTATTAT+TGG | + | tig0018755:31604-31623 | Msa1369100:intron | 30.0% |
! | TTGACATTATTATTGGTGTC+AGG | + | tig0018755:31611-31630 | Msa1369100:intron | 30.0% |
GAAAGACTCATTGTTTGAAT+TGG | + | tig0018755:31952-31971 | Msa1369100:three_prime_UTR | 30.0% | |
AATCATTCGATCTCCGATTT+AGG | + | tig0018755:29035-29054 | Msa1369100:five_prime_UTR | 35.0% | |
ATCATTCGATCTCCGATTTA+GGG | + | tig0018755:29036-29055 | Msa1369100:five_prime_UTR | 35.0% | |
! | TTGAGAAGGTATAGAGTCAT+CGG | - | tig0018755:29066-29085 | None:intergenic | 35.0% |
CAAGGTTCATAAAGCAAGAA+CGG | - | tig0018755:29119-29138 | None:intergenic | 35.0% | |
TCAAAATCGTCTTTCGTCAT+TGG | + | tig0018755:29157-29176 | Msa1369100:five_prime_UTR | 35.0% | |
!!! | TAATCGTTTTCTGAGATACG+AGG | + | tig0018755:29299-29318 | Msa1369100:five_prime_UTR | 35.0% |
TTAATCAATTCAACTCCCGT+TGG | - | tig0018755:29461-29480 | None:intergenic | 35.0% | |
! | CTTTCTTAAGAGGAAAGTGT+TGG | + | tig0018755:29484-29503 | Msa1369100:CDS | 35.0% |
TCAACAGAATAATCAAACGG+TGG | + | tig0018755:29805-29824 | Msa1369100:CDS | 35.0% | |
CAACAGAATAATCAAACGGT+GGG | + | tig0018755:29806-29825 | Msa1369100:CDS | 35.0% | |
AACAGAATAATCAAACGGTG+GGG | + | tig0018755:29807-29826 | Msa1369100:CDS | 35.0% | |
ATACTCATGCATAACCCAAT+CGG | - | tig0018755:29885-29904 | None:intergenic | 35.0% | |
ATTGGGTTATGCATGAGTAT+AGG | + | tig0018755:29885-29904 | Msa1369100:CDS | 35.0% | |
TGAGTATAGGCTTGAAGATA+AGG | + | tig0018755:29898-29917 | Msa1369100:CDS | 35.0% | |
GTATTCACCAGTTCAATATG+TGG | - | tig0018755:30013-30032 | None:intergenic | 35.0% | |
ATATTGAACTGGTGAATACG+TGG | + | tig0018755:30014-30033 | Msa1369100:intron | 35.0% | |
TTATATGCATTCGCAGTCAA+AGG | - | tig0018755:30056-30075 | None:intergenic | 35.0% | |
TGGAAAGGAATATATGCCAA+TGG | - | tig0018755:30105-30124 | None:intergenic | 35.0% | |
TCCAATGTAACAGATAAGAC+CGG | + | tig0018755:30121-30140 | Msa1369100:intron | 35.0% | |
! | TGTGCATCAAAAGCATATTC+CGG | - | tig0018755:30143-30162 | None:intergenic | 35.0% |
AATGGCATTAGTGACACAAT+AGG | - | tig0018755:30192-30211 | None:intergenic | 35.0% | |
! | TGTGTCACTAATGCCATTAA+AGG | + | tig0018755:30194-30213 | Msa1369100:intron | 35.0% |
CTACTTTAAATGCTAGGGTT+AGG | + | tig0018755:30223-30242 | Msa1369100:intron | 35.0% | |
!! | TTCATGATAGTTTTGCATGC+AGG | + | tig0018755:30305-30324 | Msa1369100:intron | 35.0% |
!! | CATTGGTTGTTTCTAATCAC+TGG | + | tig0018755:30357-30376 | Msa1369100:intron | 35.0% |
TATTCACAACGAGAATAGGA+TGG | - | tig0018755:30551-30570 | None:intergenic | 35.0% | |
GTATTTCAAAAAGAAGGTCC+TGG | + | tig0018755:30622-30641 | Msa1369100:CDS | 35.0% | |
ATATGGGAGACCATTTAATG+AGG | + | tig0018755:30663-30682 | Msa1369100:CDS | 35.0% | |
ACAGAACTATTAGATGTCAC+AGG | - | tig0018755:30754-30773 | None:intergenic | 35.0% | |
! | CTCCAAACTAGTGGATATAT+TGG | + | tig0018755:30790-30809 | Msa1369100:CDS | 35.0% |
CCTGTTTGACATGAATTTGT+TGG | - | tig0018755:30862-30881 | None:intergenic | 35.0% | |
CCAACAAATTCATGTCAAAC+AGG | + | tig0018755:30859-30878 | Msa1369100:CDS | 35.0% | |
ATAAATCCTCCTGTTTGACA+AGG | - | tig0018755:30955-30974 | None:intergenic | 35.0% | |
CCTGTTTGACATGAATTTAC+TGG | - | tig0018755:30991-31010 | None:intergenic | 35.0% | |
CCAGTAAATTCATGTCAAAC+AGG | + | tig0018755:30988-31007 | Msa1369100:CDS | 35.0% | |
CCTGTTTGACAAGAATTTGA+AGG | - | tig0018755:31033-31052 | None:intergenic | 35.0% | |
CCTTCAAATTCTTGTCAAAC+AGG | + | tig0018755:31030-31049 | Msa1369100:CDS | 35.0% | |
CTGTTTGACAAGAATTCACA+GGG | - | tig0018755:31074-31093 | None:intergenic | 35.0% | |
CTGTTTGACATGAATTTGCA+GGG | - | tig0018755:31116-31135 | None:intergenic | 35.0% | |
TCTGTTTGACATGAATTTGC+AGG | - | tig0018755:31117-31136 | None:intergenic | 35.0% | |
ATATGAATCATTTGCAGGGT+CGG | - | tig0018755:31196-31215 | None:intergenic | 35.0% | |
CTGGATATGAATCATTTGCA+GGG | - | tig0018755:31200-31219 | None:intergenic | 35.0% | |
TCTGGATATGAATCATTTGC+AGG | - | tig0018755:31201-31220 | None:intergenic | 35.0% | |
ATATGAATCATTTGCAGGGT+CGG | - | tig0018755:31196-31215 | None:intergenic | 35.0% | |
CTGGATATGAATCATTTGCA+GGG | - | tig0018755:31200-31219 | None:intergenic | 35.0% | |
TCTGGATATGAATCATTTGC+AGG | - | tig0018755:31201-31220 | None:intergenic | 35.0% | |
AAAACAGATTAGCATACCTC+AGG | - | tig0018755:31405-31424 | None:intergenic | 35.0% | |
!!! | CTCTTAACCGACTTTTTTGA+TGG | + | tig0018755:31654-31673 | Msa1369100:CDS | 35.0% |
TTCCAAGCCATCAAAAAAGT+CGG | - | tig0018755:31664-31683 | None:intergenic | 35.0% | |
TTATTTCGACTCCAACTTTC+AGG | - | tig0018755:31840-31859 | None:intergenic | 35.0% | |
ATTGTGAATAAACACGCTCT+TGG | + | tig0018755:32074-32093 | Msa1369100:three_prime_UTR | 35.0% | |
!! | ACGATGATGCACTTTTGAGA+AGG | - | tig0018755:29080-29099 | None:intergenic | 40.0% |
CGTTCTTGCTTTATGAACCT+TGG | + | tig0018755:29117-29136 | Msa1369100:five_prime_UTR | 40.0% | |
TTATGAACCTTGGCAGACTT+TGG | + | tig0018755:29127-29146 | Msa1369100:five_prime_UTR | 40.0% | |
!! | TTTCTGAGATACGAGGATTG+AGG | + | tig0018755:29306-29325 | Msa1369100:five_prime_UTR | 40.0% |
GCTATACCTAAATTGGTACC+TGG | + | tig0018755:29422-29441 | Msa1369100:CDS | 40.0% | |
CGAAATCCAGGTACCAATTT+AGG | - | tig0018755:29431-29450 | None:intergenic | 40.0% | |
TGGATTTCGATTCTCTCCAA+CGG | + | tig0018755:29442-29461 | Msa1369100:CDS | 40.0% | |
TTATCTCCAAAACGGGGATT+TGG | + | tig0018755:29676-29695 | Msa1369100:CDS | 40.0% | |
ATGAAACGAGCTACGGAAAT+TGG | + | tig0018755:29749-29768 | Msa1369100:CDS | 40.0% | |
TGAAACGAGCTACGGAAATT+GGG | + | tig0018755:29750-29769 | Msa1369100:CDS | 40.0% | |
!!! | ATTGGGTTTTGGAAAGCTAC+TGG | + | tig0018755:29767-29786 | Msa1369100:CDS | 40.0% |
TAGGCTTGAAGATAAGGACT+TGG | + | tig0018755:29904-29923 | Msa1369100:CDS | 40.0% | |
TTGGTTGCCACATATTGAAC+TGG | + | tig0018755:30003-30022 | Msa1369100:intron | 40.0% | |
GTATCAAGACTGCGAGTAAA+AGG | - | tig0018755:30083-30102 | None:intergenic | 40.0% | |
! | TCCGGTCTTATCTGTTACAT+TGG | - | tig0018755:30125-30144 | None:intergenic | 40.0% |
ACAAGTTCTCTTGGTATGAC+AGG | + | tig0018755:30579-30598 | Msa1369100:intron | 40.0% | |
GGATTCCTACGTAATCTGTA+AGG | + | tig0018755:30600-30619 | Msa1369100:intron | 40.0% | |
CTAGGAATGGTGCACAATAT+GGG | + | tig0018755:30647-30666 | Msa1369100:CDS | 40.0% | |
GACCATTTAATGAGGAAGAC+TGG | + | tig0018755:30671-30690 | Msa1369100:CDS | 40.0% | |
CTCCAGTCTTCCTCATTAAA+TGG | - | tig0018755:30676-30695 | None:intergenic | 40.0% | |
TTAGATGTCACAGGCAAACT+GGG | - | tig0018755:30745-30764 | None:intergenic | 40.0% | |
ATTAGATGTCACAGGCAAAC+TGG | - | tig0018755:30746-30765 | None:intergenic | 40.0% | |
GATCAGAATCTCCAAACTAG+TGG | + | tig0018755:30781-30800 | Msa1369100:CDS | 40.0% | |
CAATTCTGATTGACACGGTA+TGG | - | tig0018755:30824-30843 | None:intergenic | 40.0% | |
CATACCGTGTCAATCAGAAT+TGG | + | tig0018755:30822-30841 | Msa1369100:CDS | 40.0% | |
CTGTTTGACATGGATTTGCA+GGG | - | tig0018755:30903-30922 | None:intergenic | 40.0% | |
GGCATAAATCCTGTTTGACA+TGG | - | tig0018755:30913-30932 | None:intergenic | 40.0% | |
CTGTTTGACAAGGATTCACA+GGG | - | tig0018755:30945-30964 | None:intergenic | 40.0% | |
TGACATGAATTTACTGGGTC+AGG | - | tig0018755:30985-31004 | None:intergenic | 40.0% | |
TGACAAGAATTTGAAGGGTC+TGG | - | tig0018755:31027-31046 | None:intergenic | 40.0% | |
CCTGTTTGACAAGAATTCAC+AGG | - | tig0018755:31075-31094 | None:intergenic | 40.0% | |
CCTGTGAATTCTTGTCAAAC+AGG | + | tig0018755:31072-31091 | Msa1369100:CDS | 40.0% | |
TTGACATGAATTTGCAGGGT+CGG | - | tig0018755:31112-31131 | None:intergenic | 40.0% | |
CTATTTGACATGAACTCGCA+AGG | - | tig0018755:31158-31177 | None:intergenic | 40.0% | |
CTTGCGAGTTCATGTCAAAT+AGG | + | tig0018755:31156-31175 | Msa1369100:CDS | 40.0% | |
TATGAATCATTTGCAGGGTC+GGG | - | tig0018755:31195-31214 | None:intergenic | 40.0% | |
TCGTTAACAGCTTGATTGTC+TGG | - | tig0018755:31219-31238 | None:intergenic | 40.0% | |
TATGAATCATTTGCAGGGTC+GGG | - | tig0018755:31195-31214 | None:intergenic | 40.0% | |
TGTCAGGAAAACATTGCTGA+AGG | + | tig0018755:31627-31646 | Msa1369100:intron | 40.0% | |
!!! | AACCGACTTTTTTGATGGCT+TGG | + | tig0018755:31659-31678 | Msa1369100:CDS | 40.0% |
AATGCAGACTTTAGCACACA+CGG | + | tig0018755:31723-31742 | Msa1369100:CDS | 40.0% | |
TGGCTTCTACGGATAATGTT+GGG | + | tig0018755:31748-31767 | Msa1369100:CDS | 40.0% | |
ATCTAGACTCTGATACGTTC+TGG | + | tig0018755:31805-31824 | Msa1369100:CDS | 40.0% | |
TGCTCTTCGAAAATATCACG+CGG | - | tig0018755:31881-31900 | None:intergenic | 40.0% | |
!! | TGTCCCTTTAGAACCTTGTT+TGG | + | tig0018755:32158-32177 | Msa1369100:three_prime_UTR | 40.0% |
GTCATCGGCAAACCCTAAAT+CGG | - | tig0018755:29051-29070 | None:intergenic | 45.0% | |
GGTTCATAAAGCAAGAACGG+TGG | - | tig0018755:29116-29135 | None:intergenic | 45.0% | |
AAGAACACCAAAGTCTGCCA+AGG | - | tig0018755:29137-29156 | None:intergenic | 45.0% | |
GTTGGAGAGAATCGAAATCC+AGG | - | tig0018755:29443-29462 | None:intergenic | 45.0% | |
GGATTTCGATTCTCTCCAAC+GGG | + | tig0018755:29443-29462 | Msa1369100:CDS | 45.0% | |
! | AGAAGTATAGAAGTGGGCCA+AGG | + | tig0018755:29726-29745 | Msa1369100:CDS | 45.0% |
! | GAGCTACGGAAATTGGGTTT+TGG | + | tig0018755:29756-29775 | Msa1369100:CDS | 45.0% |
!!! | GTTTTGGAAAGCTACTGGTC+AGG | + | tig0018755:29772-29791 | Msa1369100:CDS | 45.0% |
GATAAGGACTTGGCTGACAA+AGG | + | tig0018755:29914-29933 | Msa1369100:CDS | 45.0% | |
GGCTGACAAAGGAATTGTTC+AGG | + | tig0018755:29925-29944 | Msa1369100:CDS | 45.0% | |
ACTCGCAGTCTTGATACCAT+TGG | + | tig0018755:30086-30105 | Msa1369100:intron | 45.0% | |
GGCATTAGTGACACAATAGG+TGG | - | tig0018755:30189-30208 | None:intergenic | 45.0% | |
GGTTAGGGTTATCCTTCGAA+GGG | + | tig0018755:30239-30258 | Msa1369100:intron | 45.0% | |
ATCCTTCGAAGGGTGAAATG+TGG | + | tig0018755:30249-30268 | Msa1369100:intron | 45.0% | |
AAAAAGAAGGTCCTGGTCCT+AGG | + | tig0018755:30629-30648 | Msa1369100:CDS | 45.0% | |
CCATATTGTGCACCATTCCT+AGG | - | tig0018755:30649-30668 | None:intergenic | 45.0% | |
CCTAGGAATGGTGCACAATA+TGG | + | tig0018755:30646-30665 | Msa1369100:CDS | 45.0% | |
! | GACTGGAGTGATGATGAAGT+AGG | + | tig0018755:30688-30707 | Msa1369100:CDS | 45.0% |
AGTGCAGCAGATTCAGCAAA+AGG | - | tig0018755:30718-30737 | None:intergenic | 45.0% | |
!! | GAATTTGTTGGGTCCAGAGA+AGG | - | tig0018755:30850-30869 | None:intergenic | 45.0% |
CCTGTTTGACATGGATTTGC+AGG | - | tig0018755:30904-30923 | None:intergenic | 45.0% | |
CCTGCAAATCCATGTCAAAC+AGG | + | tig0018755:30901-30920 | Msa1369100:CDS | 45.0% | |
CCTGTTTGACAAGGATTCAC+AGG | - | tig0018755:30946-30965 | None:intergenic | 45.0% | |
CCTGTGAATCCTTGTCAAAC+AGG | + | tig0018755:30943-30962 | Msa1369100:CDS | 45.0% | |
GTGAATCCTTGTCAAACAGG+AGG | + | tig0018755:30946-30965 | Msa1369100:CDS | 45.0% | |
GAATTTACTGGGTCAGGAGA+CGG | - | tig0018755:30979-30998 | None:intergenic | 45.0% | |
GAATTTGAAGGGTCTGGAGA+AGG | - | tig0018755:31021-31040 | None:intergenic | 45.0% | |
GAATTCACAGGGTCTGGATA+AGG | - | tig0018755:31063-31082 | None:intergenic | 45.0% | |
TGACAAGAATTCACAGGGTC+TGG | - | tig0018755:31069-31088 | None:intergenic | 45.0% | |
AGGAGACAATGCAAACTGCA+GGG | - | tig0018755:31518-31537 | None:intergenic | 45.0% | |
!! | TTTTGATGGCTTGGAAGACG+TGG | + | tig0018755:31668-31687 | Msa1369100:CDS | 45.0% |
! | GTGGATTGCTCGTCTGATTT+GGG | + | tig0018755:31687-31706 | Msa1369100:CDS | 45.0% |
!! | TCGTCTGATTTGGGATCTGT+TGG | + | tig0018755:31696-31715 | Msa1369100:CDS | 45.0% |
GTGTGCTAAAGTCTGCATTC+TGG | - | tig0018755:31722-31741 | None:intergenic | 45.0% | |
ATGCAGACTTTAGCACACAC+GGG | + | tig0018755:31724-31743 | Msa1369100:CDS | 45.0% | |
CTGGCTTCTACGGATAATGT+TGG | + | tig0018755:31747-31766 | Msa1369100:CDS | 45.0% | |
GGCTTCTACGGATAATGTTG+GGG | + | tig0018755:31749-31768 | Msa1369100:CDS | 45.0% | |
GCTTCTACGGATAATGTTGG+GGG | + | tig0018755:31750-31769 | Msa1369100:CDS | 45.0% | |
CTTCTACGGATAATGTTGGG+GGG | + | tig0018755:31751-31770 | Msa1369100:CDS | 45.0% | |
GCATGACGACTTCGATTTCA+TGG | + | tig0018755:31773-31792 | Msa1369100:CDS | 45.0% | |
!! | TCGACTCCAACTTTCAGGTT+GGG | - | tig0018755:31835-31854 | None:intergenic | 45.0% |
! | TTCGACTCCAACTTTCAGGT+TGG | - | tig0018755:31836-31855 | None:intergenic | 45.0% |
!!! | GATTCAGTCGTTGGCTCTTT+TGG | + | tig0018755:31928-31947 | Msa1369100:three_prime_UTR | 45.0% |
GTGAATAAACACGCTCTTGG+TGG | + | tig0018755:32077-32096 | Msa1369100:three_prime_UTR | 45.0% | |
AAAGCAAGAACGGTGGCGAA+CGG | - | tig0018755:29109-29128 | None:intergenic | 50.0% | |
AAACTACCTGGGAGATCCCA+AGG | - | tig0018755:29563-29582 | None:intergenic | 50.0% | |
TCCAAAACGGGGATTTGGAG+TGG | + | tig0018755:29681-29700 | Msa1369100:CDS | 50.0% | |
! | ACCACTCCAAATCCCCGTTT+TGG | - | tig0018755:29685-29704 | None:intergenic | 50.0% |
GCCAAGGATGAAACGAGCTA+CGG | + | tig0018755:29742-29761 | Msa1369100:CDS | 50.0% | |
TCCGTAGCTCGTTTCATCCT+TGG | - | tig0018755:29746-29765 | None:intergenic | 50.0% | |
CACACTGGAAAATCACCTCG+TGG | + | tig0018755:29851-29870 | Msa1369100:CDS | 50.0% | |
TCGTGGTGATCGAACCGATT+GGG | + | tig0018755:29868-29887 | Msa1369100:CDS | 50.0% | |
GGGTTAGGGTTATCCTTCGA+AGG | + | tig0018755:30238-30257 | Msa1369100:intron | 50.0% | |
CTCCACATTTCACCCTTCGA+AGG | - | tig0018755:30254-30273 | None:intergenic | 50.0% | |
GGCGCCAATTCTGATTGACA+CGG | - | tig0018755:30829-30848 | None:intergenic | 50.0% | |
ATCAGAATTGGCGCCTTCTC+TGG | + | tig0018755:30834-30853 | Msa1369100:CDS | 50.0% | |
TGACATGGATTTGCAGGGTC+AGG | - | tig0018755:30898-30917 | None:intergenic | 50.0% | |
GGATTCACAGGGTCTGGATA+AGG | - | tig0018755:30934-30953 | None:intergenic | 50.0% | |
TGACAAGGATTCACAGGGTC+TGG | - | tig0018755:30940-30959 | None:intergenic | 50.0% | |
ACATGAACTCGCAAGGTCAG+GGG | - | tig0018755:31151-31170 | None:intergenic | 50.0% | |
GACATGAACTCGCAAGGTCA+GGG | - | tig0018755:31152-31171 | None:intergenic | 50.0% | |
TGACATGAACTCGCAAGGTC+AGG | - | tig0018755:31153-31172 | None:intergenic | 50.0% | |
AGACAACAGCGTATTGCCTG+AGG | + | tig0018755:31281-31300 | Msa1369100:CDS | 50.0% | |
GAGGAGACAATGCAAACTGC+AGG | - | tig0018755:31519-31538 | None:intergenic | 50.0% | |
! | CGTGGATTGCTCGTCTGATT+TGG | + | tig0018755:31686-31705 | Msa1369100:CDS | 50.0% |
! | GAGCACTATTGCTGTTGTGC+TGG | + | tig0018755:31896-31915 | Msa1369100:three_prime_UTR | 50.0% |
!! | CTATTGCTGTTGTGCTGGCT+TGG | + | tig0018755:31901-31920 | Msa1369100:three_prime_UTR | 50.0% |
CTTGGAGGTGATTCAGTCGT+TGG | + | tig0018755:31919-31938 | Msa1369100:three_prime_UTR | 50.0% | |
!! | CAATCGGTTCGATCACCACG+AGG | - | tig0018755:29869-29888 | None:intergenic | 55.0% |
CTCGTGGTGATCGAACCGAT+TGG | + | tig0018755:29867-29886 | Msa1369100:CDS | 55.0% | |
GAAGGTCCTGGTCCTAGGAA+TGG | + | tig0018755:30634-30653 | Msa1369100:CDS | 55.0% | |
TGTGCACCATTCCTAGGACC+AGG | - | tig0018755:30643-30662 | None:intergenic | 55.0% | |
GGATTTGCAGGGTCAGGAGA+AGG | - | tig0018755:30892-30911 | None:intergenic | 55.0% | |
GAATTTGCAGGGTCGGAAGC+AGG | - | tig0018755:31105-31124 | None:intergenic | 55.0% | |
TCATTTGCAGGGTCGGGCAA+AGG | - | tig0018755:31189-31208 | None:intergenic | 55.0% | |
AGACTTTAGCACACACGGGC+TGG | + | tig0018755:31728-31747 | Msa1369100:CDS | 55.0% | |
GGCAGACCCAACCTGAAAGT+TGG | + | tig0018755:31826-31845 | Msa1369100:CDS | 55.0% | |
!! | TTGCTGTTGTGCTGGCTTGG+AGG | + | tig0018755:31904-31923 | Msa1369100:three_prime_UTR | 55.0% |
TACGCTCCTTGGGATCTCCC+AGG | + | tig0018755:29554-29573 | Msa1369100:CDS | 60.0% | |
GAACTCGCAAGGTCAGGGGA+CGG | - | tig0018755:31147-31166 | None:intergenic | 60.0% | |
!! | CACACACGGGCTGGCTTCTA+CGG | + | tig0018755:31737-31756 | Msa1369100:CDS | 60.0% |
TCATTTGCAGGGTCGGGCGC+AGG | - | tig0018755:31300-31319 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0018755 | gene | 28978 | 32182 | 28978 | ID=Msa1369100;Name=Msa1369100 |
tig0018755 | mRNA | 28978 | 32182 | 28978 | ID=Msa1369100-mRNA-1;Parent=Msa1369100;Name=Msa1369100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=441|1|1|1|1|1|4|319|490 |
tig0018755 | exon | 28978 | 29575 | 28978 | ID=Msa1369100-mRNA-1:exon:885;Parent=Msa1369100-mRNA-1 |
tig0018755 | exon | 29669 | 29946 | 29669 | ID=Msa1369100-mRNA-1:exon:886;Parent=Msa1369100-mRNA-1 |
tig0018755 | exon | 30601 | 31407 | 30601 | ID=Msa1369100-mRNA-1:exon:887;Parent=Msa1369100-mRNA-1 |
tig0018755 | exon | 31633 | 32182 | 31633 | ID=Msa1369100-mRNA-1:exon:888;Parent=Msa1369100-mRNA-1 |
tig0018755 | five_prime_UTR | 28978 | 29418 | 28978 | ID=Msa1369100-mRNA-1:five_prime_utr;Parent=Msa1369100-mRNA-1 |
tig0018755 | CDS | 29419 | 29575 | 29419 | ID=Msa1369100-mRNA-1:cds;Parent=Msa1369100-mRNA-1 |
tig0018755 | CDS | 29669 | 29946 | 29669 | ID=Msa1369100-mRNA-1:cds;Parent=Msa1369100-mRNA-1 |
tig0018755 | CDS | 30601 | 31407 | 30601 | ID=Msa1369100-mRNA-1:cds;Parent=Msa1369100-mRNA-1 |
tig0018755 | CDS | 31633 | 31863 | 31633 | ID=Msa1369100-mRNA-1:cds;Parent=Msa1369100-mRNA-1 |
tig0018755 | three_prime_UTR | 31864 | 32182 | 31864 | ID=Msa1369100-mRNA-1:three_prime_utr;Parent=Msa1369100-mRNA-1 |
Gene Sequence |
Protein sequence |