Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377320 | XP_013460646.1 | 93.794 | 1128 | 29 | 3 | 1 | 1108 | 1 | 1107 | 0.0 | 2137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377320 | sp|Q8RY22|DEGP7_ARATH | 68.254 | 1134 | 293 | 12 | 1 | 1104 | 1 | 1097 | 0.0 | 1492 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377320 | A0A072V916 | 93.794 | 1128 | 29 | 3 | 1 | 1108 | 1 | 1107 | 0.0 | 2137 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1377320 | Msa1443970 | 0.953464 | 2.587687e-111 | -8.615850e-47 |
Msa0481940 | Msa1377320 | 0.937429 | 3.515875e-98 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377320 | MtrunA17_Chr3g0111471 | 93.794 | 1128 | 29 | 3 | 1 | 1108 | 1 | 1107 | 0.0 | 2137 |
Msa1377320 | MtrunA17_Chr3g0111461 | 83.527 | 1117 | 141 | 5 | 13 | 1108 | 17 | 1111 | 0.0 | 1868 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377320 | AT3G03380.1 | 68.254 | 1134 | 293 | 12 | 1 | 1104 | 1 | 1097 | 0.0 | 1492 |
Msa1377320 | AT3G03380.2 | 67.639 | 1131 | 272 | 12 | 1 | 1104 | 1 | 1064 | 0.0 | 1476 |
Find 313 sgRNAs with CRISPR-Local
Find 1281 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTCTAGGTACATGATTT+TGG | 0.045195 | tig0019900:+29711 | Msa1377320:intron |
AATGAGGGTTATGGTGTATT+TGG | 0.144622 | tig0019900:+44710 | Msa1377320:CDS |
GTTCATTCACAGTCCTTTAT+TGG | 0.170426 | tig0019900:+39409 | Msa1377320:CDS |
ACTAACTTCCAGGAAATAAT+TGG | 0.171850 | tig0019900:-36425 | None:intergenic |
GAGTCTCATCAAACCCTTTA+TGG | 0.180402 | tig0019900:-32966 | None:intergenic |
CGTAAAACCTGTCGTCTTAT+TGG | 0.182040 | tig0019900:-44259 | None:intergenic |
AGGGCAGTGGCCCTGAATGC+TGG | 0.219688 | tig0019900:+31581 | Msa1377320:CDS |
AGGAGATTCTGTTTACCTTT+TGG | 0.234395 | tig0019900:+40551 | Msa1377320:CDS |
GGTACTGACATTTGCTTTAC+AGG | 0.236437 | tig0019900:+31502 | Msa1377320:CDS |
TTAATCCAGACACTGGAATT+TGG | 0.255950 | tig0019900:+46446 | Msa1377320:CDS |
AAGGAAGGGTCCGAGCTTTA+TGG | 0.256017 | tig0019900:+40827 | Msa1377320:CDS |
CCATCTGCTTTGGGACCTAT+TGG | 0.266489 | tig0019900:+39912 | Msa1377320:CDS |
CAAGCAAAGTCTCCAGTTTC+AGG | 0.271572 | tig0019900:-34576 | None:intergenic |
GGGTCACCTCTTCTCATAAA+TGG | 0.274771 | tig0019900:+42872 | Msa1377320:CDS |
GCAAATCTTGCTTCAATGTT+AGG | 0.275294 | tig0019900:-46396 | None:intergenic |
GTGAAACTTATGTTGATAAA+TGG | 0.279401 | tig0019900:+31769 | Msa1377320:CDS |
GCTTCTCCTGCCACTGAAAC+TGG | 0.280010 | tig0019900:+33136 | Msa1377320:CDS |
ACTAAGTGATGTTTGGATTC+AGG | 0.287605 | tig0019900:+42976 | Msa1377320:CDS |
AAGGTTGGCAATGGGTTCTT+TGG | 0.288239 | tig0019900:+46555 | Msa1377320:three_prime_UTR |
CGTTCACCAGTCAATGAAAT+TGG | 0.289969 | tig0019900:-38359 | None:intergenic |
ATCAAAGGCTGAAAATCTTT+TGG | 0.292232 | tig0019900:+44303 | Msa1377320:CDS |
CGTCATCCAGGTTTCCATCT+TGG | 0.294532 | tig0019900:+30383 | Msa1377320:intron |
TGTCATCCCGAGTGTATATC+TGG | 0.299632 | tig0019900:-38244 | None:intergenic |
AATATATCACACTCAAGATA+TGG | 0.303834 | tig0019900:+39444 | Msa1377320:CDS |
CTACCTTGCCAATCTATAAC+TGG | 0.305101 | tig0019900:-31560 | None:intergenic |
GAAGCCTTCGAGCAACTTCT+AGG | 0.305522 | tig0019900:+40583 | Msa1377320:CDS |
CTATCCCATCAGATCCATTA+TGG | 0.317860 | tig0019900:-38484 | None:intergenic |
CAATTCACAGGTGGAGTTAT+GGG | 0.321808 | tig0019900:+45770 | Msa1377320:intron |
GCACAACTCGTACAGTTAAT+TGG | 0.324113 | tig0019900:+44630 | Msa1377320:CDS |
CTCACTGGATCTCTGTATAT+TGG | 0.325069 | tig0019900:-28671 | None:intergenic |
GGGCAGTGGCCCTGAATGCT+GGG | 0.330700 | tig0019900:+31582 | Msa1377320:CDS |
AAACCTCTAACTACTACTAT+TGG | 0.331745 | tig0019900:+28192 | Msa1377320:five_prime_UTR |
CGTGCTGCAGAATTACTTCC+AGG | 0.341105 | tig0019900:+39948 | Msa1377320:CDS |
TAGCCCCAGATGATAGAAAA+AGG | 0.341781 | tig0019900:-38310 | None:intergenic |
AATAACTCCCAATTATTTCC+TGG | 0.342899 | tig0019900:+36417 | Msa1377320:CDS |
GGCCGGTACTATTGCTCGTT+TGG | 0.343918 | tig0019900:+30404 | Msa1377320:CDS |
TTTCTTCCTAATGAGGGTTA+TGG | 0.344365 | tig0019900:+44701 | Msa1377320:CDS |
CTTTCAAAGGCTCGTAGTTT+CGG | 0.345161 | tig0019900:+42953 | Msa1377320:CDS |
GATGCACAGGAACCTCTTCC+CGG | 0.347964 | tig0019900:-28649 | None:intergenic |
TTTAGGTTGTCAGGGCATTA+AGG | 0.350842 | tig0019900:+31730 | Msa1377320:intron |
GGCATTAAGGTTTCTTCAAA+AGG | 0.354904 | tig0019900:+31743 | Msa1377320:CDS |
TTTGCTTTACAGGCAGCATC+TGG | 0.356148 | tig0019900:+31512 | Msa1377320:CDS |
ATTCGCCTTAGCGGCAGCGC+TGG | 0.359435 | tig0019900:-28287 | None:intergenic |
ATCATATGATCCATCTGCTT+TGG | 0.359942 | tig0019900:+39902 | Msa1377320:CDS |
AATCGATCCTCCACCGTCTC+AGG | 0.368068 | tig0019900:+28324 | Msa1377320:CDS |
GGAACCACTTGACCCTCCTT+TGG | 0.368385 | tig0019900:-31537 | None:intergenic |
TCACAGTCCTTTATTGGAAC+TGG | 0.377035 | tig0019900:+39415 | Msa1377320:CDS |
ATGAGGGTTATGGTGTATTT+GGG | 0.378072 | tig0019900:+44711 | Msa1377320:CDS |
CGATGCCAAATTCCAGTGTC+TGG | 0.379071 | tig0019900:-46451 | None:intergenic |
AATCCAACACAAGCAGCTTC+AGG | 0.382037 | tig0019900:-29795 | None:intergenic |
CTTTGACTTGTTTAGGTGCC+AGG | 0.386157 | tig0019900:+33252 | Msa1377320:intron |
TGCTTCAATGTTAGGACTTG+TGG | 0.386301 | tig0019900:-46388 | None:intergenic |
CATTACTCAATTCCTGAAAC+TGG | 0.386382 | tig0019900:+34564 | Msa1377320:CDS |
GGGACCTATTGGTGCTTCCC+TGG | 0.387488 | tig0019900:+39923 | Msa1377320:CDS |
TTTACGTGTTAAAGGTTGTT+TGG | 0.389326 | tig0019900:+44276 | Msa1377320:CDS |
GTTTCGGACTAAGTGATGTT+TGG | 0.389512 | tig0019900:+42969 | Msa1377320:CDS |
GAAGTTATTGAGCTTGATAC+TGG | 0.392056 | tig0019900:+40684 | Msa1377320:CDS |
TCATATGATCCATCTGCTTT+GGG | 0.392240 | tig0019900:+39903 | Msa1377320:CDS |
GGATTAGAAATCAGAGTTGT+TGG | 0.394243 | tig0019900:+29813 | Msa1377320:CDS |
TTCATCAATGGGAGGTTTAA+CGG | 0.395685 | tig0019900:+28249 | Msa1377320:exon |
GTAAAACCTGTCGTCTTATT+GGG | 0.397956 | tig0019900:-44258 | None:intergenic |
CGTGTTAAAGGTTGTTTGGC+TGG | 0.399193 | tig0019900:+44280 | Msa1377320:CDS |
AACCTTCAGGAGTTGGTTGA+TGG | 0.401349 | tig0019900:+38410 | Msa1377320:CDS |
TCATAATTAGTTTCCAAGCT+AGG | 0.404713 | tig0019900:-38437 | None:intergenic |
AAACCAATAGTAGTAGTTAG+AGG | 0.405196 | tig0019900:-28195 | None:intergenic |
TAGAGCATGGAGAGTTTGTT+CGG | 0.406094 | tig0019900:+46338 | Msa1377320:CDS |
CATTCTGCAGTACGTGCTCT+TGG | 0.406112 | tig0019900:+44677 | Msa1377320:CDS |
GGGAGTCCTGCACATAGATA+TGG | 0.406421 | tig0019900:+45790 | Msa1377320:CDS |
CATACAAGATGATGGGTTAA+TGG | 0.406783 | tig0019900:+38604 | Msa1377320:CDS |
ACAATTCACAGGTGGAGTTA+TGG | 0.410566 | tig0019900:+45769 | Msa1377320:intron |
ACTTCTAAAATTCTCATAAG+TGG | 0.411543 | tig0019900:-42911 | None:intergenic |
AGCCTATGAACATTTGGAAC+CGG | 0.412655 | tig0019900:+33281 | Msa1377320:CDS |
AGGAAGGGTCCGAGCTTTAT+GGG | 0.412772 | tig0019900:+40828 | Msa1377320:CDS |
TATGACACCAGTTCCAATAA+AGG | 0.414282 | tig0019900:-39422 | None:intergenic |
AATTATTTCCTGGAAGTTAG+TGG | 0.416354 | tig0019900:+36427 | Msa1377320:CDS |
GGGGAGGTGCATACCATTCA+TGG | 0.419296 | tig0019900:-38223 | None:intergenic |
CCTTGCTCTTGAATTGATGA+AGG | 0.420155 | tig0019900:+46536 | Msa1377320:three_prime_UTR |
TTACTGCTCCACTAACTTCC+AGG | 0.422846 | tig0019900:-36435 | None:intergenic |
GCGTTTATCAACGACGAAAC+CGG | 0.423229 | tig0019900:-28470 | None:intergenic |
CTTGTTTATGTGGCAGAACC+AGG | 0.424206 | tig0019900:+36928 | Msa1377320:CDS |
TATTGAATTGCAAATTGAAA+GGG | 0.426017 | tig0019900:+34618 | Msa1377320:CDS |
AAGATCATATCCGGTGCAAA+TGG | 0.426047 | tig0019900:+42851 | Msa1377320:CDS |
ATTTGCACTACTGGCCTACA+TGG | 0.430204 | tig0019900:+46413 | Msa1377320:CDS |
AATACCCCGGGGTACACTTC+AGG | 0.430346 | tig0019900:+31803 | Msa1377320:CDS |
ATACCGTACATCTTATAGAT+TGG | 0.430860 | tig0019900:-30438 | None:intergenic |
AAGCTCAATAACTTCCATAT+TGG | 0.431622 | tig0019900:-40676 | None:intergenic |
AATACACCATAACCCTCATT+AGG | 0.432414 | tig0019900:-44707 | None:intergenic |
GTACTATTGCTCGTTTGGAT+AGG | 0.434020 | tig0019900:+30409 | Msa1377320:CDS |
GTGTCTTAAGAAAGTAGTTC+CGG | 0.434301 | tig0019900:+28378 | Msa1377320:CDS |
TACTATTGCTCGTTTGGATA+GGG | 0.434366 | tig0019900:+30410 | Msa1377320:CDS |
TCTTGGATTTCTTCCTAATG+AGG | 0.437933 | tig0019900:+44694 | Msa1377320:CDS |
ACGTTACAGAGCGACCAATA+TGG | 0.438339 | tig0019900:+40662 | Msa1377320:CDS |
CAGTGGATAGTTGAAATTAA+CGG | 0.438439 | tig0019900:+45826 | Msa1377320:CDS |
TTCTTGTGGGAGCAGATGTA+AGG | 0.440737 | tig0019900:+44597 | Msa1377320:CDS |
CATAATTAGTTTCCAAGCTA+GGG | 0.441473 | tig0019900:-38436 | None:intergenic |
AGCAAATGTCAGTACCGATA+TGG | 0.441791 | tig0019900:-31495 | None:intergenic |
GAGCGTGTAACTCACCATAA+TGG | 0.442304 | tig0019900:+38470 | Msa1377320:CDS |
CATTAACCCATCATCTTGTA+TGG | 0.444029 | tig0019900:-38603 | None:intergenic |
AAAAGCGAGGACCGGTGATT+CGG | 0.445203 | tig0019900:-28414 | None:intergenic |
GTGGTTCCCCAGTTATAGAT+TGG | 0.446310 | tig0019900:+31552 | Msa1377320:CDS |
CCATTGTGGCCTTGTTTATG+TGG | 0.448382 | tig0019900:+36918 | Msa1377320:CDS |
ACGCTGTAACTGCCGATGAC+TGG | 0.450612 | tig0019900:+28350 | Msa1377320:CDS |
CAGTTATAGATTGGCAAGGT+AGG | 0.453988 | tig0019900:+31561 | Msa1377320:CDS |
CAGTTCTGTCTAAGCTATCA+AGG | 0.454165 | tig0019900:+37415 | Msa1377320:CDS |
GTAAACAAACAGAGAGTAGA+TGG | 0.455679 | tig0019900:+38506 | Msa1377320:CDS |
ATCACCCAGCGCTGCCGCTA+AGG | 0.456618 | tig0019900:+28282 | Msa1377320:CDS |
TTACTTGATTGCAACCATAT+CGG | 0.456754 | tig0019900:+31481 | Msa1377320:CDS |
GCATTAAGGTTTCTTCAAAA+GGG | 0.458502 | tig0019900:+31744 | Msa1377320:CDS |
ACCTGGCTTATCGAATAAAT+CGG | 0.461047 | tig0019900:-42821 | None:intergenic |
TGGTCCAGCCTATGAACATT+TGG | 0.461472 | tig0019900:+33275 | Msa1377320:CDS |
GCTCCTGAAGCTGCTTGTGT+TGG | 0.464187 | tig0019900:+29792 | Msa1377320:CDS |
CTTGGATTTCTTCCTAATGA+GGG | 0.464480 | tig0019900:+44695 | Msa1377320:CDS |
AAATTAACAACATTCATCAA+TGG | 0.466700 | tig0019900:+28237 | Msa1377320:exon |
AGCATTCCAGTTTCAGTGGC+AGG | 0.468331 | tig0019900:-33142 | None:intergenic |
GGCTTCTACTTAAGCCCAAA+AGG | 0.469473 | tig0019900:-40566 | None:intergenic |
TTATCCAACATTACTTTCAA+AGG | 0.469848 | tig0019900:+42940 | Msa1377320:CDS |
CTAACTTCCAGGAAATAATT+GGG | 0.471403 | tig0019900:-36424 | None:intergenic |
GTAATTCTGCAGCACGAACC+AGG | 0.472998 | tig0019900:-39941 | None:intergenic |
TGTTGGTGAAGGTAACCTTC+AGG | 0.475030 | tig0019900:+38397 | Msa1377320:CDS |
GCATTAAATTTAGAATCTGC+TGG | 0.475600 | tig0019900:+40633 | Msa1377320:CDS |
ACTATTGGTTTCTCTCAGAA+AGG | 0.476620 | tig0019900:+28207 | Msa1377320:five_prime_UTR |
ACCCGGTTCCAAATGTTCAT+AGG | 0.476665 | tig0019900:-33283 | None:intergenic |
AGGCAATCGGGCTGAAAAGC+AGG | 0.477121 | tig0019900:-38290 | None:intergenic |
AATTAACAACATTCATCAAT+GGG | 0.477910 | tig0019900:+28238 | Msa1377320:exon |
CGAGCCTTTGAAAGTAATGT+TGG | 0.479406 | tig0019900:-42944 | None:intergenic |
CGAGAGGTTGAACTTCTTGT+GGG | 0.482248 | tig0019900:+44584 | Msa1377320:CDS |
TTAACAAAAGAATCTAGATC+TGG | 0.483168 | tig0019900:-45859 | None:intergenic |
ATGGAGAGTTTGTTCGGGTA+AGG | 0.486252 | tig0019900:+46344 | Msa1377320:CDS |
CCAACCTCTTTCATATCAGC+AGG | 0.486445 | tig0019900:+36459 | Msa1377320:CDS |
TCTAAATTTAATGCAGAGCA+AGG | 0.487100 | tig0019900:-40624 | None:intergenic |
ACTGATTCTAGCTGCGCTAC+CGG | 0.487479 | tig0019900:+28451 | Msa1377320:CDS |
AACATAGCTTCAGCAACAAC+AGG | 0.489164 | tig0019900:-28620 | None:intergenic |
TTCGCCTTAGCGGCAGCGCT+GGG | 0.489643 | tig0019900:-28286 | None:intergenic |
AGTCATCCAATTTCATTGAC+TGG | 0.491233 | tig0019900:+38353 | Msa1377320:CDS |
AGAGCATGGAGAGTTTGTTC+GGG | 0.491394 | tig0019900:+46339 | Msa1377320:CDS |
AAACAAGGCCACAATGGAAT+CGG | 0.491806 | tig0019900:-36912 | None:intergenic |
TATTAGATTTATCTAAAGCT+TGG | 0.492288 | tig0019900:-44396 | None:intergenic |
TGAAGCAAGATTTGCACTAC+TGG | 0.492489 | tig0019900:+46404 | Msa1377320:CDS |
ATATATCACACTCAAGATAT+GGG | 0.492643 | tig0019900:+39445 | Msa1377320:CDS |
GGCAGTGGCCCTGAATGCTG+GGG | 0.495366 | tig0019900:+31583 | Msa1377320:CDS |
TTATTCGATAAGCCAGGTCC+TGG | 0.496137 | tig0019900:+42826 | Msa1377320:CDS |
GTACCCCGGGGTATTGAAAC+CGG | 0.497585 | tig0019900:-31795 | None:intergenic |
TGAAGGTAACCTTCAGGAGT+TGG | 0.498262 | tig0019900:+38403 | Msa1377320:CDS |
TGTTCATAGGCTGGACCACC+TGG | 0.499559 | tig0019900:-33270 | None:intergenic |
ATGAGAGCATAATTGTGAAC+AGG | 0.499728 | tig0019900:-39879 | None:intergenic |
CGAACCAGGGAAGCACCAAT+AGG | 0.500693 | tig0019900:-39927 | None:intergenic |
AGGTTGTTTGGCTGGATCAA+AGG | 0.500857 | tig0019900:+44288 | Msa1377320:CDS |
TCATCTGGGGCTAAAGATGT+TGG | 0.503587 | tig0019900:+38320 | Msa1377320:CDS |
ATCCAGGTTTCCATCTTGGC+CGG | 0.505196 | tig0019900:+30387 | Msa1377320:intron |
TCAGGTGCCATACAAGATGA+TGG | 0.505743 | tig0019900:+38596 | Msa1377320:CDS |
TTCTCATAAATGGTGTCAAA+CGG | 0.507395 | tig0019900:+42882 | Msa1377320:CDS |
ACTCACCATAATGGATCTGA+TGG | 0.507483 | tig0019900:+38479 | Msa1377320:CDS |
GGTTCCAAATGTTCATAGGC+TGG | 0.507803 | tig0019900:-33279 | None:intergenic |
ATATTGAATTGCAAATTGAA+AGG | 0.508331 | tig0019900:+34617 | Msa1377320:CDS |
GCTCTTGAATTGATGAAGGT+TGG | 0.508678 | tig0019900:+46540 | Msa1377320:three_prime_UTR |
ACTGGCCTACATGGGAATTG+AGG | 0.509066 | tig0019900:+46422 | Msa1377320:CDS |
GATGGGTTAATGGACTTTCA+AGG | 0.510838 | tig0019900:+38614 | Msa1377320:CDS |
GTCCTGGACAAGATCATATC+CGG | 0.512663 | tig0019900:+42842 | Msa1377320:CDS |
CTGATGGCTGCAGTCGGTGT+TGG | 0.514792 | tig0019900:+38187 | Msa1377320:intron |
GTCGTCGTTCTCCGAATCAC+CGG | 0.515596 | tig0019900:+28403 | Msa1377320:CDS |
CTATTGGTTTCTCTCAGAAA+GGG | 0.515633 | tig0019900:+28208 | Msa1377320:five_prime_UTR |
ATTTAATGCAGAGCAAGGAT+TGG | 0.515688 | tig0019900:-40619 | None:intergenic |
ATGGGGAAGCTTCTCCACTC+AGG | 0.517556 | tig0019900:+40846 | Msa1377320:CDS |
ATTCGGAGAACGACGACGGC+CGG | 0.518305 | tig0019900:-28397 | None:intergenic |
TGACTGGTGAACGTGCTTGT+GGG | 0.523894 | tig0019900:+38369 | Msa1377320:CDS |
TTATGTTGATAAATGGAAGC+CGG | 0.523991 | tig0019900:+31776 | Msa1377320:CDS |
TCCGATTTATTCGATAAGCC+AGG | 0.524575 | tig0019900:+42820 | Msa1377320:CDS |
AAGGGGTGCTCGAGTACCAT+TGG | 0.525746 | tig0019900:+37434 | Msa1377320:CDS |
GCACAAATCATTCGCCTTAG+CGG | 0.525751 | tig0019900:-28296 | None:intergenic |
AATCGCCATGTCGTTAAGCC+TGG | 0.528226 | tig0019900:+28511 | Msa1377320:CDS |
ATCAAAGAGCTTAACGCTGT+TGG | 0.529844 | tig0019900:+34648 | Msa1377320:CDS |
CTAACCTGCTGATATGAAAG+AGG | 0.530400 | tig0019900:-36463 | None:intergenic |
AGTCAATGAAATTGGATGAC+TGG | 0.531237 | tig0019900:-38351 | None:intergenic |
TTGACACCATTTATGAGAAG+AGG | 0.531326 | tig0019900:-42878 | None:intergenic |
TTGACTGGTGAACGTGCTTG+TGG | 0.531978 | tig0019900:+38368 | Msa1377320:CDS |
TGCTTCCACGACAAATGCAT+CGG | 0.532551 | tig0019900:+38643 | Msa1377320:CDS |
GCAGATGTAAGGGATGGAAA+TGG | 0.533832 | tig0019900:+44608 | Msa1377320:CDS |
GATGTACTTGTTCGTGTCAA+TGG | 0.534103 | tig0019900:+33306 | Msa1377320:CDS |
CACCGGATATGATCTTGTCC+AGG | 0.534575 | tig0019900:-42844 | None:intergenic |
ACGAGAGGTTGAACTTCTTG+TGG | 0.534855 | tig0019900:+44583 | Msa1377320:CDS |
AGATCATATCCGGTGCAAAT+GGG | 0.537309 | tig0019900:+42852 | Msa1377320:CDS |
AGCAATAGTACCGGCCAAGA+TGG | 0.538114 | tig0019900:-30397 | None:intergenic |
TCTCTGTATATTGGATGCAC+AGG | 0.538426 | tig0019900:-28662 | None:intergenic |
AAAATTCTCATAAGTGGCAT+AGG | 0.540469 | tig0019900:-42905 | None:intergenic |
GGTTGATGGTGTCCCTAGCT+TGG | 0.542782 | tig0019900:+38424 | Msa1377320:CDS |
TACAAACCATATCTATGTGC+AGG | 0.542867 | tig0019900:-45796 | None:intergenic |
CCCCTGTTCCAGCTGAAAGT+AGG | 0.544596 | tig0019900:+42761 | Msa1377320:intron |
AATTGATGAAGGTTGGCAAT+GGG | 0.545439 | tig0019900:+46547 | Msa1377320:three_prime_UTR |
ATATGATCTTGTCCAGGACC+TGG | 0.545650 | tig0019900:-42838 | None:intergenic |
GTCATCCCGAGTGTATATCT+GGG | 0.546481 | tig0019900:-38243 | None:intergenic |
TACCTTGCCAATCTATAACT+GGG | 0.546891 | tig0019900:-31559 | None:intergenic |
AAAGAATCTAGATCTGGAGT+TGG | 0.548892 | tig0019900:-45853 | None:intergenic |
CCTGCTGATATGAAAGAGGT+TGG | 0.549015 | tig0019900:-36459 | None:intergenic |
GCAGCATCTGGGACCAAAGG+AGG | 0.549997 | tig0019900:+31524 | Msa1377320:CDS |
CATCAGAAGTGAGACAGAGC+AGG | 0.552016 | tig0019900:+32999 | Msa1377320:CDS |
ATTGAATTGCAAATTGAAAG+GGG | 0.552414 | tig0019900:+34619 | Msa1377320:CDS |
AAGACACTTCCGCCAGTCAT+CGG | 0.553782 | tig0019900:-28362 | None:intergenic |
TTTGATGAGACTCGTCGACT+TGG | 0.555109 | tig0019900:+32976 | Msa1377320:CDS |
CACCTCCCCAGATATACACT+CGG | 0.555557 | tig0019900:+38237 | Msa1377320:CDS |
GTAGATGGTTTATCAACTGA+TGG | 0.559997 | tig0019900:+38521 | Msa1377320:CDS |
CCAATAGGTCCCAAAGCAGA+TGG | 0.560650 | tig0019900:-39912 | None:intergenic |
GACTGGTGAACGTGCTTGTG+GGG | 0.561110 | tig0019900:+38370 | Msa1377320:CDS |
TATTGGTCGCTCTGTAACGT+GGG | 0.561763 | tig0019900:-40659 | None:intergenic |
ATGAACACAATCAAGCATAC+AGG | 0.562042 | tig0019900:-39392 | None:intergenic |
GCTTCCACGACAAATGCATC+GGG | 0.562254 | tig0019900:+38644 | Msa1377320:CDS |
TTGAGGTTTAATCCAGACAC+TGG | 0.562805 | tig0019900:+46439 | Msa1377320:CDS |
AGGCTTAACGACATGGCGAT+TGG | 0.566002 | tig0019900:-28509 | None:intergenic |
GAAGCCGGTTTCAATACCCC+GGG | 0.567490 | tig0019900:+31791 | Msa1377320:CDS |
ATATCAAGGAAGCATGTGAC+TGG | 0.569555 | tig0019900:-44361 | None:intergenic |
GCTCCAATCTATAAGATGTA+CGG | 0.571387 | tig0019900:+30435 | Msa1377320:CDS |
AGTTATAGATTGGCAAGGTA+GGG | 0.572212 | tig0019900:+31562 | Msa1377320:CDS |
ATATTGGTCGCTCTGTAACG+TGG | 0.572451 | tig0019900:-40660 | None:intergenic |
CCACATAAACAAGGCCACAA+TGG | 0.574738 | tig0019900:-36918 | None:intergenic |
GCCTATGAACATTTGGAACC+GGG | 0.577581 | tig0019900:+33282 | Msa1377320:CDS |
TACACTCGGGATGACAGTAC+TGG | 0.577972 | tig0019900:+38251 | Msa1377320:CDS |
GAAAGACCCAATAAGACGAC+AGG | 0.578073 | tig0019900:+44252 | Msa1377320:CDS |
AGATATATGCTCTCTAAAGC+AGG | 0.578187 | tig0019900:+37324 | Msa1377320:intron |
CACCATCAACCAACTCCTGA+AGG | 0.578439 | tig0019900:-38412 | None:intergenic |
AGAGTTGTTGGTAATGATAG+TGG | 0.579124 | tig0019900:+29825 | Msa1377320:CDS |
AGTTCTGTCTAAGCTATCAA+GGG | 0.579194 | tig0019900:+37416 | Msa1377320:CDS |
TGGTGAGTTACACGCTCTGA+AGG | 0.580509 | tig0019900:-38464 | None:intergenic |
ATGGTTTGTATGCTCTTCAG+TGG | 0.581891 | tig0019900:+45809 | Msa1377320:CDS |
GAATCTCCTCGACATAATGC+CGG | 0.582869 | tig0019900:-40537 | None:intergenic |
CATTAAGGTTTCTTCAAAAG+GGG | 0.583184 | tig0019900:+31745 | Msa1377320:CDS |
CGCGGATCGTCATCGAAGGA+AGG | 0.583499 | tig0019900:+37470 | Msa1377320:CDS |
GAATTGATGAAGGTTGGCAA+TGG | 0.583568 | tig0019900:+46546 | Msa1377320:three_prime_UTR |
CAGGTGCCATACAAGATGAT+GGG | 0.584747 | tig0019900:+38597 | Msa1377320:CDS |
ATGCACCACATTCTTTAACA+TGG | 0.584944 | tig0019900:+46581 | Msa1377320:three_prime_UTR |
ACAAACCTGAAGTGTACCCC+GGG | 0.586694 | tig0019900:-31808 | None:intergenic |
AGTGCCCGATGCATTTGTCG+TGG | 0.588087 | tig0019900:-38648 | None:intergenic |
TGCTAACAGATGAACAAGGA+AGG | 0.588657 | tig0019900:+40812 | Msa1377320:CDS |
AACAAGCATTCCAGTTTCAG+TGG | 0.589397 | tig0019900:-33146 | None:intergenic |
TTAAACCTCAATTCCCATGT+AGG | 0.589505 | tig0019900:-46427 | None:intergenic |
GGAAGCCGGTTTCAATACCC+CGG | 0.590041 | tig0019900:+31790 | Msa1377320:CDS |
TGCTATCAGGAACTAGAGCA+TGG | 0.590136 | tig0019900:+46325 | Msa1377320:intron |
AAGCAGGCTTAGCAATCCAC+AGG | 0.590366 | tig0019900:-38274 | None:intergenic |
GTATGAATGAGCGGACAGTA+AGG | 0.590679 | tig0019900:+46505 | Msa1377320:exon |
CAGGCAGCATCTGGGACCAA+AGG | 0.592331 | tig0019900:+31521 | Msa1377320:CDS |
TCTCTAAAGCAGGAGTTCCT+CGG | 0.594341 | tig0019900:+37334 | Msa1377320:CDS |
GACAAACCTGAAGTGTACCC+CGG | 0.594509 | tig0019900:-31809 | None:intergenic |
CATCAACTCATCAGTTCGTG+AGG | 0.597000 | tig0019900:+42792 | Msa1377320:CDS |
CAAGCAGCTTCAGGAGCAAG+AGG | 0.598505 | tig0019900:-29786 | None:intergenic |
ATATGGTTGCAATCAAGTAA+TGG | 0.599117 | tig0019900:-31478 | None:intergenic |
TCTTGTGGGAGCAGATGTAA+GGG | 0.599880 | tig0019900:+44598 | Msa1377320:CDS |
AAGAGGTGACCCATTTGCAC+CGG | 0.600747 | tig0019900:-42861 | None:intergenic |
GTAAGGACAATTCACCTCGA+TGG | 0.601347 | tig0019900:+46361 | Msa1377320:CDS |
TGACAGTTGATCGCCATGAA+TGG | 0.603508 | tig0019900:+38210 | Msa1377320:CDS |
TGAAACTGGAATGCTTGTTG+TGG | 0.606004 | tig0019900:+33150 | Msa1377320:CDS |
CCTTCATCAATTCAAGAGCA+AGG | 0.606115 | tig0019900:-46536 | None:intergenic |
CTGGTTCTGCCACATAAACA+AGG | 0.606175 | tig0019900:-36927 | None:intergenic |
TTGCTTTACAGGCAGCATCT+GGG | 0.607141 | tig0019900:+31513 | Msa1377320:CDS |
AGAAGCTTCCCCATAAAGCT+CGG | 0.607495 | tig0019900:-40837 | None:intergenic |
CACAGTTCTGTATGAATGAG+CGG | 0.609490 | tig0019900:+46496 | Msa1377320:exon |
ATCCAAACGAGCAATAGTAC+CGG | 0.610178 | tig0019900:-30406 | None:intergenic |
TAACAACATTCATCAATGGG+AGG | 0.610986 | tig0019900:+28241 | Msa1377320:exon |
ATTGACCATGTTAAAGAATG+TGG | 0.612986 | tig0019900:-46586 | None:intergenic |
AGCAAGCTCACTCGATCCAG+AGG | 0.615151 | tig0019900:-31638 | None:intergenic |
GGACTTGTGGCTTTCCATCG+AGG | 0.617641 | tig0019900:-46375 | None:intergenic |
ACTCACCAGGCTTAACGACA+TGG | 0.620725 | tig0019900:-28516 | None:intergenic |
GCGTAGCTTATATACTCCAA+TGG | 0.620735 | tig0019900:-37450 | None:intergenic |
AGAAACTTCCGATTCCATTG+TGG | 0.620858 | tig0019900:+36904 | Msa1377320:CDS |
GGGACCAAAGGAGGGTCAAG+TGG | 0.621062 | tig0019900:+31533 | Msa1377320:CDS |
TAATTCTGCAGCACGAACCA+GGG | 0.622448 | tig0019900:-39940 | None:intergenic |
GCAGTGGCCCTGAATGCTGG+GGG | 0.623590 | tig0019900:+31584 | Msa1377320:CDS |
GGGCAAAATATTAAGCGCAT+CGG | 0.624481 | tig0019900:+31604 | Msa1377320:CDS |
ATTTCCTAGAAGTTGCTCGA+AGG | 0.624658 | tig0019900:-40587 | None:intergenic |
TCCCGAGTGTATATCTGGGG+AGG | 0.625073 | tig0019900:-38239 | None:intergenic |
CAATGGGAGGTTTAACGGAG+AGG | 0.625682 | tig0019900:+28254 | Msa1377320:exon |
CAGCATCTGGGACCAAAGGA+GGG | 0.625718 | tig0019900:+31525 | Msa1377320:CDS |
TTGTTTATGTGGCAGAACCA+GGG | 0.625939 | tig0019900:+36929 | Msa1377320:CDS |
GAGCATAATTGTGAACAGGA+TGG | 0.626249 | tig0019900:-39875 | None:intergenic |
TGACTTGTTTAGGTGCCAGG+TGG | 0.629016 | tig0019900:+33255 | Msa1377320:intron |
TCCCCAGTTATAGATTGGCA+AGG | 0.631830 | tig0019900:+31557 | Msa1377320:CDS |
ACTCGTACAGTTAATTGGTG+TGG | 0.632548 | tig0019900:+44635 | Msa1377320:CDS |
GCTACGCGGATCGTCATCGA+AGG | 0.633634 | tig0019900:+37466 | Msa1377320:CDS |
GTGGGAGCAGATGTAAGGGA+TGG | 0.634758 | tig0019900:+44602 | Msa1377320:CDS |
CAACTCATCAGTTCGTGAGG+GGG | 0.636136 | tig0019900:+42795 | Msa1377320:CDS |
ATCAACTCATCAGTTCGTGA+GGG | 0.639732 | tig0019900:+42793 | Msa1377320:CDS |
AGATTGGCAAGGTAGGGCAG+TGG | 0.639736 | tig0019900:+31568 | Msa1377320:CDS |
CTCACCATAATGGATCTGAT+GGG | 0.641102 | tig0019900:+38480 | Msa1377320:CDS |
GTTATGGTGTATTTGGGACA+AGG | 0.641898 | tig0019900:+44717 | Msa1377320:CDS |
CTGTAACTGCCGATGACTGG+CGG | 0.642760 | tig0019900:+28353 | Msa1377320:CDS |
ACCTTGCCAATCTATAACTG+GGG | 0.644140 | tig0019900:-31558 | None:intergenic |
AGAGCACGTACTGCAGAATG+TGG | 0.644495 | tig0019900:-44674 | None:intergenic |
TTTGCACTACTGGCCTACAT+GGG | 0.645205 | tig0019900:+46414 | Msa1377320:CDS |
GGAAGGGTCCGAGCTTTATG+GGG | 0.645225 | tig0019900:+40829 | Msa1377320:CDS |
TGGTAATGATAGTGGTGAGA+AGG | 0.645560 | tig0019900:+29833 | Msa1377320:CDS |
TGCTTGTGTCTAGGGACGAG+AGG | 0.650818 | tig0019900:+44568 | Msa1377320:intron |
CCAGAGCCGGCATTATGTCG+AGG | 0.651448 | tig0019900:+40531 | Msa1377320:intron |
TCAACTCATCAGTTCGTGAG+GGG | 0.652329 | tig0019900:+42794 | Msa1377320:CDS |
ACACGAACAAGTACATCACC+CGG | 0.658346 | tig0019900:-33300 | None:intergenic |
GCTAACAGATGAACAAGGAA+GGG | 0.658389 | tig0019900:+40813 | Msa1377320:CDS |
GGTGATTCGGAGAACGACGA+CGG | 0.658589 | tig0019900:-28401 | None:intergenic |
ATAACTGGTAAGAACCTGAG+TGG | 0.658759 | tig0019900:-40860 | None:intergenic |
TTCGTCGTTGATAAACGCCG+TGG | 0.658801 | tig0019900:+28475 | Msa1377320:CDS |
GGGATGACAGTACTGGCCTG+TGG | 0.659309 | tig0019900:+38258 | Msa1377320:CDS |
GGTAGCGCAGCTAGAATCAG+TGG | 0.663610 | tig0019900:-28449 | None:intergenic |
ACACAATCAAGCATACAGGA+TGG | 0.673443 | tig0019900:-39388 | None:intergenic |
ACCTCCCCAGATATACACTC+GGG | 0.676370 | tig0019900:+38238 | Msa1377320:CDS |
CGCTCATTCATACAGAACTG+TGG | 0.679587 | tig0019900:-46495 | None:intergenic |
CAATCAAGCATACAGGATGG+AGG | 0.679860 | tig0019900:-39385 | None:intergenic |
TCATCCCGAGTGTATATCTG+GGG | 0.682855 | tig0019900:-38242 | None:intergenic |
GAATTGCAAATTGAAAGGGG+TGG | 0.697481 | tig0019900:+34622 | Msa1377320:CDS |
ACTGGTGAACGTGCTTGTGG+GGG | 0.704352 | tig0019900:+38371 | Msa1377320:CDS |
AATGCTTGTTGTGGAATCTG+CGG | 0.706997 | tig0019900:+33159 | Msa1377320:CDS |
GTTCTGTCTAAGCTATCAAG+GGG | 0.711059 | tig0019900:+37417 | Msa1377320:CDS |
GATTGGTAAGAATAATACCA+CGG | 0.738993 | tig0019900:-28492 | None:intergenic |
TGAAGAAATATCTTGCCTCG+AGG | 0.765962 | tig0019900:+37383 | Msa1377320:CDS |
GGTGTGCTAACAGATGAACA+AGG | 0.786959 | tig0019900:+40808 | Msa1377320:CDS |
GAACTGATGTTAGATCCTCG+AGG | 0.788994 | tig0019900:-37398 | None:intergenic |
AAGCCGGTTTCAATACCCCG+GGG | 0.792554 | tig0019900:+31792 | Msa1377320:CDS |
CAAACCTGAAGTGTACCCCG+GGG | 0.820259 | tig0019900:-31807 | None:intergenic |
ATTGGAGTATATAAGCTACG+CGG | 0.822375 | tig0019900:+37452 | Msa1377320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATTTTTTATTTTTTT+AGG | + | tig0019900:30305-30324 | Msa1377320:intron | 0.0% |
!!! | ATTAATATTTTTTTTTTTTT+TGG | + | tig0019900:39247-39266 | Msa1377320:intron | 0.0% |
!! | TTATTAAAAAAAATTATATT+GGG | - | tig0019900:41682-41701 | None:intergenic | 0.0% |
!! | TTTATTAAAAAAAATTATAT+TGG | - | tig0019900:41683-41702 | None:intergenic | 0.0% |
!!! | TTATTTATGTTATTTTCTTT+TGG | + | tig0019900:30651-30670 | Msa1377320:intron | 10.0% |
!! | ATATTAAAAGAGTTAATTAA+AGG | - | tig0019900:30933-30952 | None:intergenic | 10.0% |
!!! | ACTTTTTTTTCAAAAATTTT+GGG | + | tig0019900:31123-31142 | Msa1377320:intron | 10.0% |
!!! | TGTTTTATTTTTTTGAAATA+TGG | + | tig0019900:31303-31322 | Msa1377320:intron | 10.0% |
!! | TTTAATAACAAAATTAAATG+AGG | - | tig0019900:33703-33722 | None:intergenic | 10.0% |
!!! | AGTTCATATTTTTTTTTTAA+CGG | - | tig0019900:34282-34301 | None:intergenic | 10.0% |
!! | CTAAATTAACAAAATTATAA+AGG | - | tig0019900:34413-34432 | None:intergenic | 10.0% |
!!! | AATCTAATTACTTTTTTTAA+TGG | - | tig0019900:35033-35052 | None:intergenic | 10.0% |
!! | TTTAATGAAATTATCTATTT+AGG | + | tig0019900:35959-35978 | Msa1377320:intron | 10.0% |
!! | AGAAAAAATATAGTTTAATA+AGG | + | tig0019900:36533-36552 | Msa1377320:intron | 10.0% |
!!! | TTTATTTAAAATCAATTTTG+TGG | + | tig0019900:38853-38872 | Msa1377320:intron | 10.0% |
!!! | TAACAAAATTAATTTTTTAG+AGG | + | tig0019900:39102-39121 | Msa1377320:intron | 10.0% |
!! | AAAAAAAATATTAATACAAG+TGG | - | tig0019900:39242-39261 | None:intergenic | 10.0% |
!! | TAATAATATTTATACTTTGA+CGG | + | tig0019900:40074-40093 | Msa1377320:intron | 10.0% |
!!! | CATTATTATGTTTTTATATT+GGG | - | tig0019900:41120-41139 | None:intergenic | 10.0% |
!!! | ACATTATTATGTTTTTATAT+TGG | - | tig0019900:41121-41140 | None:intergenic | 10.0% |
!! | CAAAACATTATAATTAATTA+TGG | - | tig0019900:44104-44123 | None:intergenic | 10.0% |
!!! | TTTAACTTTATGATTTTGTT+CGG | + | tig0019900:28581-28600 | Msa1377320:intron | 15.0% |
!! | AAACTTATAAATTACCATAA+AGG | - | tig0019900:29060-29079 | None:intergenic | 15.0% |
!! | TATTAAATTTCTTTAGTGTT+TGG | + | tig0019900:29289-29308 | Msa1377320:intron | 15.0% |
!!! | TTTGCTTTTATCTTTTTTTA+TGG | + | tig0019900:29437-29456 | Msa1377320:intron | 15.0% |
!! | TTAAAATGTTTATCCAAATA+TGG | + | tig0019900:29500-29519 | Msa1377320:intron | 15.0% |
!!! | TTTTCTATTATAACCATATT+TGG | - | tig0019900:29516-29535 | None:intergenic | 15.0% |
!!! | ATTTTAGGAAATAATTATTG+TGG | + | tig0019900:29584-29603 | Msa1377320:intron | 15.0% |
!!! | TTTAGAAATTTTATAGCATT+AGG | - | tig0019900:29753-29772 | None:intergenic | 15.0% |
!! | GATAATTATACAAAATTGTT+GGG | - | tig0019900:30354-30373 | None:intergenic | 15.0% |
!! | AGATAATTATACAAAATTGT+TGG | - | tig0019900:30355-30374 | None:intergenic | 15.0% |
!!! | ACAATTTTGTATAATTATCT+TGG | + | tig0019900:30355-30374 | Msa1377320:intron | 15.0% |
!!! | TTAATTAAAAAATGATGATG+TGG | - | tig0019900:31089-31108 | None:intergenic | 15.0% |
!! | TTTAATTAAAAAACACATGA+AGG | + | tig0019900:31100-31119 | Msa1377320:intron | 15.0% |
!!! | GACTTTTTTTTCAAAAATTT+TGG | + | tig0019900:31122-31141 | Msa1377320:intron | 15.0% |
!!! | CTTTTTTTTCAAAAATTTTG+GGG | + | tig0019900:31124-31143 | Msa1377320:intron | 15.0% |
!! | TTTCAATTTACAAGAAAATT+TGG | - | tig0019900:31938-31957 | None:intergenic | 15.0% |
!!! | AAATTGCAAAGAAATTATTT+TGG | - | tig0019900:32165-32184 | None:intergenic | 15.0% |
!! | AAATTTCATGATAAACAAAA+TGG | - | tig0019900:32392-32411 | None:intergenic | 15.0% |
!!! | TATTTGTGTAAATTTTATAC+AGG | + | tig0019900:32933-32952 | Msa1377320:intron | 15.0% |
!! | AAATGACATGAAAATATATA+TGG | + | tig0019900:33580-33599 | Msa1377320:intron | 15.0% |
!!! | AAATTTTCATGTAAAACAAT+AGG | + | tig0019900:33795-33814 | Msa1377320:intron | 15.0% |
!! | ACTAGAATGATTAAATTTAT+GGG | + | tig0019900:34911-34930 | Msa1377320:intron | 15.0% |
!! | TGGATTTCAATATTATTATA+GGG | - | tig0019900:35013-35032 | None:intergenic | 15.0% |
!! | ATGGATTTCAATATTATTAT+AGG | - | tig0019900:35014-35033 | None:intergenic | 15.0% |
!! | TATTAAGTATCTTAGAATTT+GGG | - | tig0019900:35403-35422 | None:intergenic | 15.0% |
!! | ATATTAAGTATCTTAGAATT+TGG | - | tig0019900:35404-35423 | None:intergenic | 15.0% |
!! | TGGAATTAAATTAATAAGTA+TGG | - | tig0019900:36987-37006 | None:intergenic | 15.0% |
!!! | CATTAAATTTTTTTTGCTTT+AGG | - | tig0019900:38800-38819 | None:intergenic | 15.0% |
!! | ATGTCTGTAATTTATAAAAA+AGG | + | tig0019900:38944-38963 | Msa1377320:intron | 15.0% |
!! | AACATTCTAAATTTAAGAAA+TGG | - | tig0019900:39988-40007 | None:intergenic | 15.0% |
!!! | TGTAACTTTTTAAAACTTAA+GGG | - | tig0019900:41256-41275 | None:intergenic | 15.0% |
!!! | TTGTAACTTTTTAAAACTTA+AGG | - | tig0019900:41257-41276 | None:intergenic | 15.0% |
!!! | GTTTTAAAAAGTTACAATTT+TGG | + | tig0019900:41260-41279 | Msa1377320:intron | 15.0% |
!!! | TGGGATTTTTTTTTTTTTTT+TGG | - | tig0019900:41483-41502 | None:intergenic | 15.0% |
!! | ACTTTATCTTTAATCTATAT+GGG | - | tig0019900:41502-41521 | None:intergenic | 15.0% |
!!! | ATTTTGAATTTGTGAAAAAT+AGG | + | tig0019900:41803-41822 | Msa1377320:intron | 15.0% |
!!! | TTTTGAATTTGTGAAAAATA+GGG | + | tig0019900:41804-41823 | Msa1377320:intron | 15.0% |
!! | AAAGATAAACATGATTTATT+GGG | - | tig0019900:43267-43286 | None:intergenic | 15.0% |
!! | AAAAGATAAACATGATTTAT+TGG | - | tig0019900:43268-43287 | None:intergenic | 15.0% |
!!! | TATTATATTTGTTGTATTGT+TGG | - | tig0019900:43300-43319 | None:intergenic | 15.0% |
!! | CAACAATATAACATTATTAT+AGG | + | tig0019900:43348-43367 | Msa1377320:intron | 15.0% |
!! | CTATACTATATATATCTAAA+GGG | - | tig0019900:43432-43451 | None:intergenic | 15.0% |
!! | TCTATACTATATATATCTAA+AGG | - | tig0019900:43433-43452 | None:intergenic | 15.0% |
!! | ATCATTATATATTATTCAAC+TGG | - | tig0019900:43468-43487 | None:intergenic | 15.0% |
!! | TTACATATATAATCAATCTA+AGG | + | tig0019900:43649-43668 | Msa1377320:intron | 15.0% |
!!! | ACTTACCATTAAATTTTAAA+CGG | + | tig0019900:43936-43955 | Msa1377320:intron | 15.0% |
!! | CATTATAATTAATTATGGTT+TGG | - | tig0019900:44099-44118 | None:intergenic | 15.0% |
!!! | CAATATTTTAATTCTTGAAA+AGG | + | tig0019900:44762-44781 | Msa1377320:intron | 15.0% |
!! | CAAAAAGAATTTACTATAAT+AGG | + | tig0019900:45539-45558 | Msa1377320:intron | 15.0% |
!! | ATAATTACAATACAGATAAA+AGG | - | tig0019900:46297-46316 | None:intergenic | 15.0% |
!! | AAATTAACAACATTCATCAA+TGG | + | tig0019900:28237-28256 | Msa1377320:exon | 20.0% |
!! | AATTAACAACATTCATCAAT+GGG | + | tig0019900:28238-28257 | Msa1377320:exon | 20.0% |
!! | TAATAGAAAAACTCATATTC+TGG | + | tig0019900:29526-29545 | Msa1377320:intron | 20.0% |
!!! | TTGTGTATATGTTTGATTTT+AGG | + | tig0019900:29569-29588 | Msa1377320:intron | 20.0% |
!!! | TGAAATATTGTTTTTCCTAA+CGG | + | tig0019900:30194-30213 | Msa1377320:intron | 20.0% |
!!! | TTAAACTATTTTTTGATGCA+GGG | + | tig0019900:30531-30550 | Msa1377320:intron | 20.0% |
!!! | TAACTCTTTTAATATGTCTA+TGG | + | tig0019900:30938-30957 | Msa1377320:intron | 20.0% |
!!! | TTCCATATTAAAAGCTTTAT+TGG | + | tig0019900:31279-31298 | Msa1377320:intron | 20.0% |
!!! | AACCAATAAAGCTTTTAATA+TGG | - | tig0019900:31284-31303 | None:intergenic | 20.0% |
!!! | TTCTAGAAACTAATTCAATT+GGG | + | tig0019900:31675-31694 | Msa1377320:intron | 20.0% |
!!! | AATAGAGTGATTTGTTTTTT+AGG | + | tig0019900:31713-31732 | Msa1377320:intron | 20.0% |
!! | GAATCATGAGAAAAAATTTA+AGG | - | tig0019900:31858-31877 | None:intergenic | 20.0% |
!! | TAACTTCATTGAAAACTTAT+TGG | - | tig0019900:31915-31934 | None:intergenic | 20.0% |
!! | TGCTTAAAAAGTCAAAATAT+CGG | + | tig0019900:32023-32042 | Msa1377320:intron | 20.0% |
!! | AAAATAATTTCTCATAAAGG+AGG | - | tig0019900:32233-32252 | None:intergenic | 20.0% |
!! | GCAAAAATAATTTCTCATAA+AGG | - | tig0019900:32236-32255 | None:intergenic | 20.0% |
!!! | TTATGAGAAATTATTTTTGC+AGG | + | tig0019900:32236-32255 | Msa1377320:intron | 20.0% |
!!! | GAAATTTTAGAAAAATAAGG+TGG | - | tig0019900:32290-32309 | None:intergenic | 20.0% |
!! | TATCATGAAATTTCAAATAC+TGG | + | tig0019900:32399-32418 | Msa1377320:intron | 20.0% |
!! | CACACATATATATACTAAAT+TGG | - | tig0019900:32732-32751 | None:intergenic | 20.0% |
!! | TTAAGCACATAAGAAAAATA+AGG | - | tig0019900:32821-32840 | None:intergenic | 20.0% |
!!! | TCTTCTTCTCTTTATTTATA+TGG | + | tig0019900:32886-32905 | Msa1377320:intron | 20.0% |
!! | ATTTATATGGATGTTTCATT+TGG | + | tig0019900:32899-32918 | Msa1377320:intron | 20.0% |
!!! | AAATGCAAAGAATGTTTTTT+AGG | - | tig0019900:33377-33396 | None:intergenic | 20.0% |
!! | AAACAAAAAACCCAAAAAAA+AGG | - | tig0019900:33425-33444 | None:intergenic | 20.0% |
!! | ATTATGTATATCATTAGCAA+CGG | - | tig0019900:33903-33922 | None:intergenic | 20.0% |
!!! | TTTAGAGGTTTGTTTTTTAT+TGG | + | tig0019900:34126-34145 | Msa1377320:intron | 20.0% |
!!! | CTTTGTACTTTCTTTTTTTA+CGG | + | tig0019900:34212-34231 | Msa1377320:intron | 20.0% |
!! | ATATTGAATTGCAAATTGAA+AGG | + | tig0019900:34617-34636 | Msa1377320:CDS | 20.0% |
!! | TATTGAATTGCAAATTGAAA+GGG | + | tig0019900:34618-34637 | Msa1377320:CDS | 20.0% |
!!! | TATTTATATTTTCTGTGGTA+AGG | + | tig0019900:34742-34761 | Msa1377320:intron | 20.0% |
!! | TTATATAATTCTATGAAGCT+AGG | - | tig0019900:34821-34840 | None:intergenic | 20.0% |
!!! | AGGCTAAAATTTTATAAGAT+TGG | - | tig0019900:34859-34878 | None:intergenic | 20.0% |
!! | CACTAGAATGATTAAATTTA+TGG | + | tig0019900:34910-34929 | Msa1377320:intron | 20.0% |
!! | TTATAGGGCTATATATTATT+CGG | - | tig0019900:34998-35017 | None:intergenic | 20.0% |
!! | TAAATGTGTGTTTATAGTTT+GGG | + | tig0019900:35329-35348 | Msa1377320:intron | 20.0% |
!! | AAATACAATTATCACACATT+TGG | - | tig0019900:35752-35771 | None:intergenic | 20.0% |
!!! | ATGTGTGATAATTGTATTTT+TGG | + | tig0019900:35753-35772 | Msa1377320:intron | 20.0% |
!!! | TGTGTGATAATTGTATTTTT+GGG | + | tig0019900:35754-35773 | Msa1377320:intron | 20.0% |
!! | ACATTAAAGTACATATTAGT+GGG | - | tig0019900:36033-36052 | None:intergenic | 20.0% |
!! | ACATTAAAGTACATATTAGT+GGG | - | tig0019900:36033-36052 | None:intergenic | 20.0% |
!! | GAATGCAAATATATAAAAGT+TGG | - | tig0019900:36184-36203 | None:intergenic | 20.0% |
!! | GATGAAAATTTAAAGAAAGT+AGG | - | tig0019900:36376-36395 | None:intergenic | 20.0% |
!!! | TTTCTTTAAATTTTCATCTC+AGG | + | tig0019900:36378-36397 | Msa1377320:intron | 20.0% |
!! | ATACTAACTTCATAAATTTC+AGG | - | tig0019900:36639-36658 | None:intergenic | 20.0% |
!! | TGAAATTTATGAAGTTAGTA+TGG | + | tig0019900:36638-36657 | Msa1377320:intron | 20.0% |
!! | ACCAATATAATGAAAGAAAA+AGG | - | tig0019900:36674-36693 | None:intergenic | 20.0% |
!!! | CAGTATATTTTAACAAAAGA+AGG | - | tig0019900:36714-36733 | None:intergenic | 20.0% |
!! | AAACATAACTATAATGACAA+TGG | - | tig0019900:36865-36884 | None:intergenic | 20.0% |
!! | TATACCTAGATAATAAACAT+TGG | + | tig0019900:36956-36975 | Msa1377320:intron | 20.0% |
!! | ATAACCAATGTTTATTATCT+AGG | - | tig0019900:36963-36982 | None:intergenic | 20.0% |
!!! | GCAATGTTTATTTAACATTT+TGG | + | tig0019900:37257-37276 | Msa1377320:intron | 20.0% |
!! | GCAATAATTAAAAAATTTGC+TGG | + | tig0019900:37360-37379 | Msa1377320:CDS | 20.0% |
!! | AGATATTTATGTTGAAGTTA+TGG | + | tig0019900:37668-37687 | Msa1377320:intron | 20.0% |
!! | GATATTTATGTTGAAGTTAT+GGG | + | tig0019900:37669-37688 | Msa1377320:intron | 20.0% |
!! | AACATATCACAATTGTAATA+TGG | + | tig0019900:37827-37846 | Msa1377320:intron | 20.0% |
!!! | AAGATTAGTTTCTAATCTTA+AGG | - | tig0019900:37882-37901 | None:intergenic | 20.0% |
!! | TAAGATTAGAAACTAATCTT+AGG | + | tig0019900:37882-37901 | Msa1377320:intron | 20.0% |
!!! | ATTCATCTTTCCTTTTATTT+TGG | + | tig0019900:37999-38018 | Msa1377320:intron | 20.0% |
!! | CAAAATTATGAGTGAAAAAA+AGG | - | tig0019900:39128-39147 | None:intergenic | 20.0% |
!!! | TTTTTTCACTCATAATTTTG+AGG | + | tig0019900:39128-39147 | Msa1377320:intron | 20.0% |
!!! | CTTAAATTTAGAATGTTTGA+AGG | + | tig0019900:39991-40010 | Msa1377320:intron | 20.0% |
!!! | GTAACTTTTTAAAACTTAAG+GGG | - | tig0019900:41255-41274 | None:intergenic | 20.0% |
!!! | CTTGTGTCATTTTTTAAATA+GGG | + | tig0019900:41407-41426 | Msa1377320:intron | 20.0% |
!!! | TTGTGTCATTTTTTAAATAG+GGG | + | tig0019900:41408-41427 | Msa1377320:intron | 20.0% |
!! | GACTTTATCTTTAATCTATA+TGG | - | tig0019900:41503-41522 | None:intergenic | 20.0% |
!! | TTAACAAGATTAAATTCATG+TGG | + | tig0019900:41743-41762 | Msa1377320:intron | 20.0% |
!! | TTTCACAAATTCAAAATTTC+AGG | - | tig0019900:41800-41819 | None:intergenic | 20.0% |
!!! | AAATTTTGAGAATGTTCTTT+AGG | + | tig0019900:41832-41851 | Msa1377320:intron | 20.0% |
!! | AAGGTTGGAAATATAAAAAA+TGG | - | tig0019900:42160-42179 | None:intergenic | 20.0% |
!! | TTCATATACTTAAGTAGTTT+AGG | - | tig0019900:42327-42346 | None:intergenic | 20.0% |
!! | TCAAATTAAGCATTTCAAAT+GGG | - | tig0019900:42684-42703 | None:intergenic | 20.0% |
!! | ATCAAATTAAGCATTTCAAA+TGG | - | tig0019900:42685-42704 | None:intergenic | 20.0% |
!! | TAGTTATAAAAGATTACACA+TGG | - | tig0019900:43055-43074 | None:intergenic | 20.0% |
!! | TAACACATGTAAATTATGAA+CGG | + | tig0019900:43174-43193 | Msa1377320:intron | 20.0% |
!!! | TTATTGGGTTTGTTATAATT+TGG | - | tig0019900:43252-43271 | None:intergenic | 20.0% |
!!! | ATTATAGGAAAATTTGTTCA+AGG | + | tig0019900:43363-43382 | Msa1377320:intron | 20.0% |
!!! | TTATAGGAAAATTTGTTCAA+GGG | + | tig0019900:43364-43383 | Msa1377320:intron | 20.0% |
!! | TATATATCTAAAGGGAATAA+GGG | - | tig0019900:43424-43443 | None:intergenic | 20.0% |
!! | ATATATATCTAAAGGGAATA+AGG | - | tig0019900:43425-43444 | None:intergenic | 20.0% |
!! | GAAAGGAAAATTAGAAAATA+AGG | + | tig0019900:43544-43563 | Msa1377320:intron | 20.0% |
!!! | TTATCTTTTTTCTGATAAAG+TGG | + | tig0019900:43749-43768 | Msa1377320:intron | 20.0% |
!!! | CTTACCATTAAATTTTAAAC+GGG | + | tig0019900:43937-43956 | Msa1377320:intron | 20.0% |
!! | AAAAAATCTCTTAGTAATGA+TGG | - | tig0019900:44072-44091 | None:intergenic | 20.0% |
!!! | TATTAGATTTATCTAAAGCT+TGG | - | tig0019900:44399-44418 | None:intergenic | 20.0% |
!! | ATTGCAAGTAAAATTGTATT+GGG | + | tig0019900:44840-44859 | Msa1377320:intron | 20.0% |
!!! | TAGTTGTTATTTCAAAAACT+TGG | - | tig0019900:44979-44998 | None:intergenic | 20.0% |
!! | TATTGTTCTGATCATAAATT+TGG | + | tig0019900:45490-45509 | Msa1377320:intron | 20.0% |
!!! | ATTTTTATTTTGAATTACGG+TGG | + | tig0019900:45590-45609 | Msa1377320:intron | 20.0% |
!!! | TTATTATTTGCCTGTTTTTA+AGG | + | tig0019900:45660-45679 | Msa1377320:intron | 20.0% |
!!! | TATTTTTCTTCCTTAAAAAC+AGG | - | tig0019900:45673-45692 | None:intergenic | 20.0% |
!! | ACATTAGCATTAATCATTTA+TGG | + | tig0019900:46082-46101 | Msa1377320:intron | 20.0% |
!! | ATTATTACATAAATGCTATC+AGG | + | tig0019900:46312-46331 | Msa1377320:intron | 20.0% |
!!! | AAAACAAAATTTTGACTCAC+TGG | - | tig0019900:28689-28708 | None:intergenic | 25.0% |
! | TGCAAATAAATAAGCCTTTA+TGG | + | tig0019900:29043-29062 | Msa1377320:intron | 25.0% |
!! | ATCACAAAATCTAAGAGTAT+TGG | - | tig0019900:29270-29289 | None:intergenic | 25.0% |
! | AAATTTCTTTAGTGTTTGGA+TGG | + | tig0019900:29293-29312 | Msa1377320:intron | 25.0% |
! | AGCAAAAATTAAAGAGCTTA+TGG | - | tig0019900:29423-29442 | None:intergenic | 25.0% |
!! | TTAAGAGTGAAGACTTATTT+TGG | + | tig0019900:29945-29964 | Msa1377320:intron | 25.0% |
!!! | GTTAAACTATTTTTTGATGC+AGG | + | tig0019900:30530-30549 | Msa1377320:intron | 25.0% |
! | AGTGTCACATCATTAAAAAT+TGG | - | tig0019900:30852-30871 | None:intergenic | 25.0% |
!!! | TTTGGTTTTCTTAGTTTTTG+TGG | - | tig0019900:30984-31003 | None:intergenic | 25.0% |
!! | AGAAAACCAAAAAATTTGCT+TGG | + | tig0019900:30993-31012 | Msa1377320:intron | 25.0% |
!!! | TTGATTCCAAGCAAATTTTT+TGG | - | tig0019900:31002-31021 | None:intergenic | 25.0% |
!!! | TTTTTTCAAAAATTTTGGGG+AGG | + | tig0019900:31127-31146 | Msa1377320:intron | 25.0% |
! | AAAATAGAAGGAAAACGAAA+AGG | - | tig0019900:31195-31214 | None:intergenic | 25.0% |
! | ATGACTGTGTTAAAAATAGA+AGG | - | tig0019900:31207-31226 | None:intergenic | 25.0% |
!! | CAATTGAATTAGTTTCTAGA+AGG | - | tig0019900:31676-31695 | None:intergenic | 25.0% |
!! | CTTCTAGAAACTAATTCAAT+TGG | + | tig0019900:31674-31693 | Msa1377320:intron | 25.0% |
!!! | ATTTGTTTTTTAGGTTGTCA+GGG | + | tig0019900:31722-31741 | Msa1377320:intron | 25.0% |
!! | GTGAAACTTATGTTGATAAA+TGG | + | tig0019900:31769-31788 | Msa1377320:CDS | 25.0% |
! | TTTGTCCTTGAAATTATTCT+TGG | + | tig0019900:31826-31845 | Msa1377320:intron | 25.0% |
! | AAGAACCAAGAATAATTTCA+AGG | - | tig0019900:31834-31853 | None:intergenic | 25.0% |
!! | TATATGAAGTTGCAATCTTT+TGG | + | tig0019900:32051-32070 | Msa1377320:intron | 25.0% |
!!! | GGGGAAATTTTAGAAAAATA+AGG | - | tig0019900:32293-32312 | None:intergenic | 25.0% |
! | ATAAACACGAAAAAACAGTA+AGG | - | tig0019900:32435-32454 | None:intergenic | 25.0% |
! | ATGTATAATGAGCAAGAAAA+CGG | - | tig0019900:32675-32694 | None:intergenic | 25.0% |
! | CATTATACATGTTTAGATTG+TGG | + | tig0019900:32685-32704 | Msa1377320:intron | 25.0% |
! | ACTATCTAAAAAATCAAAGG+TGG | - | tig0019900:33109-33128 | None:intergenic | 25.0% |
! | CGTACTATCTAAAAAATCAA+AGG | - | tig0019900:33112-33131 | None:intergenic | 25.0% |
!!! | AAAGAATGTTTTTTAGGAAG+GGG | - | tig0019900:33371-33390 | None:intergenic | 25.0% |
!!! | CAAAGAATGTTTTTTAGGAA+GGG | - | tig0019900:33372-33391 | None:intergenic | 25.0% |
!!! | TAATAAGTTGTTTAGCTTTC+AGG | - | tig0019900:33474-33493 | None:intergenic | 25.0% |
! | CACTACATCAACAAATTATT+TGG | + | tig0019900:33832-33851 | Msa1377320:intron | 25.0% |
! | GCTAATGATATACATAATTG+TGG | + | tig0019900:33905-33924 | Msa1377320:intron | 25.0% |
!! | TTATTGGTGTTTAAGATGTA+CGG | + | tig0019900:34142-34161 | Msa1377320:intron | 25.0% |
! | TGAAATGAATCATCAAACAT+GGG | - | tig0019900:34444-34463 | None:intergenic | 25.0% |
! | TTGAAATGAATCATCAAACA+TGG | - | tig0019900:34445-34464 | None:intergenic | 25.0% |
!! | TGTTTGATGATTCATTTCAA+CGG | + | tig0019900:34445-34464 | Msa1377320:intron | 25.0% |
!! | TTTTGTAGCTTTCAAATGTA+AGG | - | tig0019900:34477-34496 | None:intergenic | 25.0% |
! | AAAAAATGATGTGTTCATCA+TGG | + | tig0019900:34494-34513 | Msa1377320:intron | 25.0% |
! | ATTGAATTGCAAATTGAAAG+GGG | + | tig0019900:34619-34638 | Msa1377320:CDS | 25.0% |
!! | TGAGCTATTTATATTTTCTG+TGG | + | tig0019900:34737-34756 | Msa1377320:intron | 25.0% |
! | CTAACTTAAACTTACAAAAC+CGG | - | tig0019900:35139-35158 | None:intergenic | 25.0% |
! | CTAATACCATCTTAGAATTT+GGG | - | tig0019900:35168-35187 | None:intergenic | 25.0% |
! | TCTAATACCATCTTAGAATT+TGG | - | tig0019900:35169-35188 | None:intergenic | 25.0% |
! | CAAACTATAAACACACATTT+AGG | - | tig0019900:35330-35349 | None:intergenic | 25.0% |
! | CTAAATGTGTGTTTATAGTT+TGG | + | tig0019900:35328-35347 | Msa1377320:intron | 25.0% |
! | AAATGTGTGTTTATAGTTTG+GGG | + | tig0019900:35330-35349 | Msa1377320:intron | 25.0% |
! | ATTTGGTTACAACAGATTAA+AGG | - | tig0019900:35735-35754 | None:intergenic | 25.0% |
!!! | TAAAAAACTCCCTTTTTCAT+TGG | - | tig0019900:35873-35892 | None:intergenic | 25.0% |
! | CACATTAAAGTACATATTAG+TGG | - | tig0019900:36034-36053 | None:intergenic | 25.0% |
! | CTAATATGTACTTTAATGTG+TGG | + | tig0019900:36034-36053 | Msa1377320:intron | 25.0% |
! | CACATTAAAGTACATATTAG+TGG | - | tig0019900:36034-36053 | None:intergenic | 25.0% |
! | AAAGTCTCATGAATTTGAAA+TGG | + | tig0019900:36153-36172 | Msa1377320:intron | 25.0% |
! | CAGGTTAGTAAGATTATATT+TGG | + | tig0019900:36478-36497 | Msa1377320:intron | 25.0% |
!! | GCCTTTTTCTTTCATTATAT+TGG | + | tig0019900:36670-36689 | Msa1377320:intron | 25.0% |
!! | AATATACTGTTTTCCATGAA+TGG | + | tig0019900:36725-36744 | Msa1377320:intron | 25.0% |
! | TTTACTGCAAAATAGTTATC+TGG | + | tig0019900:36811-36830 | Msa1377320:intron | 25.0% |
! | ATAACTATAATGACAATGGT+AGG | - | tig0019900:36861-36880 | None:intergenic | 25.0% |
!!! | ATGTTTATCACTTTTAATGC+AGG | + | tig0019900:36879-36898 | Msa1377320:intron | 25.0% |
! | AATTCCATTCCACAAAAAAT+TGG | + | tig0019900:37000-37019 | Msa1377320:intron | 25.0% |
!!! | ATATCCAATTTTTTGTGGAA+TGG | - | tig0019900:37007-37026 | None:intergenic | 25.0% |
!!! | AACAGATATCCAATTTTTTG+TGG | - | tig0019900:37012-37031 | None:intergenic | 25.0% |
! | GGATATCTGTTTGTATTTAT+AGG | + | tig0019900:37021-37040 | Msa1377320:intron | 25.0% |
! | GAAAAATTATAACTAGTACC+AGG | + | tig0019900:37053-37072 | Msa1377320:intron | 25.0% |
! | AATTAACAATTCAACTATCC+TGG | - | tig0019900:37074-37093 | None:intergenic | 25.0% |
! | TTGTTATAACTCTGATTATC+TGG | + | tig0019900:37093-37112 | Msa1377320:intron | 25.0% |
!!! | TATGGGTTTTAGATAAAAGT+AGG | + | tig0019900:37686-37705 | Msa1377320:intron | 25.0% |
! | TCTATGTATCCCTATAAATA+GGG | - | tig0019900:37775-37794 | None:intergenic | 25.0% |
! | ACTCATAATCCTTAATCAAT+AGG | + | tig0019900:37794-37813 | Msa1377320:intron | 25.0% |
! | CTCATAATCCTTAATCAATA+GGG | + | tig0019900:37795-37814 | Msa1377320:intron | 25.0% |
! | GTAATATGGAAACTAATACT+AGG | + | tig0019900:37841-37860 | Msa1377320:intron | 25.0% |
! | ATCTTACAGACCAAAATAAA+AGG | - | tig0019900:38012-38031 | None:intergenic | 25.0% |
!!! | TATTTTGGTCTGTAAGATAT+TGG | + | tig0019900:38014-38033 | Msa1377320:intron | 25.0% |
!! | AGTTTTCTCAGATTCATTTA+GGG | - | tig0019900:38564-38583 | None:intergenic | 25.0% |
!! | TAGTTTTCTCAGATTCATTT+AGG | - | tig0019900:38565-38584 | None:intergenic | 25.0% |
! | AAAACTAAGCTAGAAAAATC+AGG | + | tig0019900:38578-38597 | Msa1377320:CDS | 25.0% |
! | AATTTATAAAAAAGGCAACC+CGG | + | tig0019900:38952-38971 | Msa1377320:intron | 25.0% |
! | AATATATCACACTCAAGATA+TGG | + | tig0019900:39444-39463 | Msa1377320:CDS | 25.0% |
! | ATATATCACACTCAAGATAT+GGG | + | tig0019900:39445-39464 | Msa1377320:CDS | 25.0% |
! | ATTAGCAACAGATTCTTTAA+GGG | - | tig0019900:39780-39799 | None:intergenic | 25.0% |
! | TATTAGCAACAGATTCTTTA+AGG | - | tig0019900:39781-39800 | None:intergenic | 25.0% |
! | TCTAAATTTAAGAAATGGCA+TGG | - | tig0019900:39983-40002 | None:intergenic | 25.0% |
! | TAAATAACTGTAGCAATTGA+TGG | + | tig0019900:40351-40370 | Msa1377320:intron | 25.0% |
! | AAATAACTGTAGCAATTGAT+GGG | + | tig0019900:40352-40371 | Msa1377320:intron | 25.0% |
!! | TTGATCTTGACATTTTTCAT+TGG | + | tig0019900:40904-40923 | Msa1377320:intron | 25.0% |
!! | GGAAAAACACTAAAGTATTA+TGG | + | tig0019900:40937-40956 | Msa1377320:intron | 25.0% |
! | GATTAATGTGTGGATATAAA+TGG | - | tig0019900:41172-41191 | None:intergenic | 25.0% |
! | TTCTCAAAAAGTTGTGATTA+TGG | - | tig0019900:41337-41356 | None:intergenic | 25.0% |
!!! | ACAACTTTTTGAGAAGATAA+GGG | + | tig0019900:41342-41361 | Msa1377320:intron | 25.0% |
! | ATCATATTTCCCTTATGTTA+GGG | + | tig0019900:41373-41392 | Msa1377320:intron | 25.0% |
!!! | GCTTGTGTCATTTTTTAAAT+AGG | + | tig0019900:41406-41425 | Msa1377320:intron | 25.0% |
!!! | TGTGTCATTTTTTAAATAGG+GGG | + | tig0019900:41409-41428 | Msa1377320:intron | 25.0% |
! | AAGAAATAGATGATATTGAG+AGG | + | tig0019900:41922-41941 | Msa1377320:intron | 25.0% |
! | AGAAATAGATGATATTGAGA+GGG | + | tig0019900:41923-41942 | Msa1377320:intron | 25.0% |
! | GAACTAAAAAAATGTATTGG+AGG | + | tig0019900:41999-42018 | Msa1377320:intron | 25.0% |
! | TAAAAAAATGTATTGGAGGA+GGG | + | tig0019900:42003-42022 | Msa1377320:intron | 25.0% |
! | AGTGTATATAAATAGCACTA+AGG | - | tig0019900:42226-42245 | None:intergenic | 25.0% |
! | AATTGCATGTTATGTTTACA+AGG | + | tig0019900:42254-42273 | Msa1377320:intron | 25.0% |
! | GTATGTTTCCTATTGAAAAT+AGG | - | tig0019900:42383-42402 | None:intergenic | 25.0% |
!!! | ACTTCTAAAATTCTCATAAG+TGG | - | tig0019900:42914-42933 | None:intergenic | 25.0% |
! | TTATCCAACATTACTTTCAA+AGG | + | tig0019900:42940-42959 | Msa1377320:CDS | 25.0% |
! | ATATATCTAAAGGGAATAAG+GGG | - | tig0019900:43423-43442 | None:intergenic | 25.0% |
! | TCAACTTATATTTCACAATG+AGG | + | tig0019900:43487-43506 | Msa1377320:intron | 25.0% |
!! | TAGAGATTTGGTTAAGATAT+TGG | + | tig0019900:43678-43697 | Msa1377320:intron | 25.0% |
!!! | TTCTTTAAAGTAGTGAAAGA+AGG | - | tig0019900:44158-44177 | None:intergenic | 25.0% |
! | GTATTTAGTCAAATTATTGC+AGG | + | tig0019900:44219-44238 | Msa1377320:intron | 25.0% |
! | CATTGCAAGTAAAATTGTAT+TGG | + | tig0019900:44839-44858 | Msa1377320:intron | 25.0% |
!! | ACTCTTGATTTTTACAACAT+TGG | - | tig0019900:45059-45078 | None:intergenic | 25.0% |
!!! | AGTAAATTCTTTTTGAGTCA+AGG | - | tig0019900:45534-45553 | None:intergenic | 25.0% |
! | TTAACAAAAGAATCTAGATC+TGG | - | tig0019900:45862-45881 | None:intergenic | 25.0% |
!! | TTCTTTTGTTAATGTGACAA+AGG | + | tig0019900:45870-45889 | Msa1377320:CDS | 25.0% |
!! | ACTAAATATAAGCTCTAACT+AGG | - | tig0019900:45952-45971 | None:intergenic | 25.0% |
! | GTTAGAGCTTATATTTAGTA+TGG | + | tig0019900:45953-45972 | Msa1377320:intron | 25.0% |
! | CATGTGTACATATTATATGA+TGG | + | tig0019900:46017-46036 | Msa1377320:intron | 25.0% |
! | TCTGTTTATCTGCTTTATAT+AGG | + | tig0019900:46044-46063 | Msa1377320:intron | 25.0% |
! | AAAAATTTGCAAACACTTTG+AGG | - | tig0019900:46139-46158 | None:intergenic | 25.0% |
AAACCTCTAACTACTACTAT+TGG | + | tig0019900:28192-28211 | Msa1377320:five_prime_UTR | 30.0% | |
AAACCAATAGTAGTAGTTAG+AGG | - | tig0019900:28198-28217 | None:intergenic | 30.0% | |
GATTGGTAAGAATAATACCA+CGG | - | tig0019900:28495-28514 | None:intergenic | 30.0% | |
!!! | TTGTTCGGTTTTGAATTTGT+AGG | + | tig0019900:28596-28615 | Msa1377320:intron | 30.0% |
AAAATAAGCTCAATCCAAAC+GGG | - | tig0019900:28800-28819 | None:intergenic | 30.0% | |
CAAAATAAGCTCAATCCAAA+CGG | - | tig0019900:28801-28820 | None:intergenic | 30.0% | |
!! | TATTATTCACGAGCTTGTTA+AGG | + | tig0019900:28863-28882 | Msa1377320:intron | 30.0% |
!! | GTATGGATTGAGCTTATTTT+AGG | - | tig0019900:28976-28995 | None:intergenic | 30.0% |
AAAATAAGCTCAATCCATAC+AGG | + | tig0019900:28976-28995 | Msa1377320:intron | 30.0% | |
! | TGAAATAAGCCTTATCCAAA+TGG | + | tig0019900:29196-29215 | Msa1377320:intron | 30.0% |
! | GAAATAAGCCTTATCCAAAT+GGG | + | tig0019900:29197-29216 | Msa1377320:intron | 30.0% |
AGTTTCATAGGTGTTTATGT+CGG | - | tig0019900:29338-29357 | None:intergenic | 30.0% | |
TAAACACCTATGAAACTGTT+TGG | + | tig0019900:29341-29360 | Msa1377320:intron | 30.0% | |
AAACACCTATGAAACTGTTT+GGG | + | tig0019900:29342-29361 | Msa1377320:intron | 30.0% | |
! | TTCTCTAGGTACATGATTTT+GGG | + | tig0019900:29712-29731 | Msa1377320:intron | 30.0% |
!!! | TACATGATTTTGGGTTCTTT+CGG | + | tig0019900:29721-29740 | Msa1377320:CDS | 30.0% |
TTCTTTGTGAAGACTAGATT+GGG | - | tig0019900:29992-30011 | None:intergenic | 30.0% | |
ATTCTTTGTGAAGACTAGAT+TGG | - | tig0019900:29993-30012 | None:intergenic | 30.0% | |
ATATCAATCAAACTAGTTCC+TGG | + | tig0019900:30014-30033 | Msa1377320:intron | 30.0% | |
! | TTCCTGGCATTTTTAAATTG+AGG | + | tig0019900:30030-30049 | Msa1377320:intron | 30.0% |
! | TAGTCTCTGACACTTTTATA+CGG | - | tig0019900:30114-30133 | None:intergenic | 30.0% |
TCTTCTTCTGTAAATGTTCA+TGG | + | tig0019900:30139-30158 | Msa1377320:intron | 30.0% | |
AAATGTTCATGGACTTTCTT+TGG | + | tig0019900:30150-30169 | Msa1377320:intron | 30.0% | |
!! | ATATTGTTTTTCCTAACGGT+TGG | + | tig0019900:30198-30217 | Msa1377320:intron | 30.0% |
TGAAAAAAATACCAACCGTT+AGG | - | tig0019900:30212-30231 | None:intergenic | 30.0% | |
!!! | AACGGTTGGTATTTTTTTCA+CGG | + | tig0019900:30212-30231 | Msa1377320:intron | 30.0% |
! | CTTCCTTTTATTGATGTAGA+TGG | + | tig0019900:30258-30277 | Msa1377320:intron | 30.0% |
TGTCCATCTACATCAATAAA+AGG | - | tig0019900:30264-30283 | None:intergenic | 30.0% | |
ATACCGTACATCTTATAGAT+TGG | - | tig0019900:30441-30460 | None:intergenic | 30.0% | |
ATCAAAATTCAAGCTACTCA+AGG | - | tig0019900:30509-30528 | None:intergenic | 30.0% | |
ACATTCTATATGCAAGTAAG+TGG | + | tig0019900:30574-30593 | Msa1377320:intron | 30.0% | |
! | TAACACAGTCATATTTTTCC+TGG | + | tig0019900:31215-31234 | Msa1377320:intron | 30.0% |
! | AACACAGTCATATTTTTCCT+GGG | + | tig0019900:31216-31235 | Msa1377320:intron | 30.0% |
AATATGGAAGATTAAGCGAA+AGG | + | tig0019900:31319-31338 | Msa1377320:intron | 30.0% | |
ATATGGAAGATTAAGCGAAA+GGG | + | tig0019900:31320-31339 | Msa1377320:intron | 30.0% | |
! | ACCAATTTTATGCCTTCATT+TGG | + | tig0019900:31394-31413 | Msa1377320:intron | 30.0% |
CAAATAAAGATGCCAAATGA+AGG | - | tig0019900:31409-31428 | None:intergenic | 30.0% | |
! | TCATTTGGCATCTTTATTTG+TGG | + | tig0019900:31409-31428 | Msa1377320:intron | 30.0% |
ATATGGTTGCAATCAAGTAA+TGG | - | tig0019900:31481-31500 | None:intergenic | 30.0% | |
TTACTTGATTGCAACCATAT+CGG | + | tig0019900:31481-31500 | Msa1377320:CDS | 30.0% | |
!!! | GATTTGTTTTTTAGGTTGTC+AGG | + | tig0019900:31721-31740 | Msa1377320:intron | 30.0% |
GCATTAAGGTTTCTTCAAAA+GGG | + | tig0019900:31744-31763 | Msa1377320:CDS | 30.0% | |
CATTAAGGTTTCTTCAAAAG+GGG | + | tig0019900:31745-31764 | Msa1377320:CDS | 30.0% | |
! | TTATGTTGATAAATGGAAGC+CGG | + | tig0019900:31776-31795 | Msa1377320:CDS | 30.0% |
ACTAAAGAAATTTCGGATTG+GGG | - | tig0019900:32312-32331 | None:intergenic | 30.0% | |
CACTAAAGAAATTTCGGATT+GGG | - | tig0019900:32313-32332 | None:intergenic | 30.0% | |
TAGGTGCACTAAAGAAATTT+CGG | - | tig0019900:32319-32338 | None:intergenic | 30.0% | |
TTCAGTTACATAGACACAAT+AGG | - | tig0019900:32338-32357 | None:intergenic | 30.0% | |
! | CTTTTGTCAATATCTAAGCT+TGG | + | tig0019900:32474-32493 | Msa1377320:intron | 30.0% |
!! | ATCTTTAATTTGCTCCTTGT+CGG | + | tig0019900:32546-32565 | Msa1377320:intron | 30.0% |
TGTATAATGAGCAAGAAAAC+GGG | - | tig0019900:32674-32693 | None:intergenic | 30.0% | |
TGAAATAGACTATCACGTAA+AGG | - | tig0019900:33216-33235 | None:intergenic | 30.0% | |
!! | CTCTAATCTTTGACTTGTTT+AGG | + | tig0019900:33245-33264 | Msa1377320:intron | 30.0% |
!!! | AAGAATGTTTTTTAGGAAGG+GGG | - | tig0019900:33370-33389 | None:intergenic | 30.0% |
!!! | GCAAAGAATGTTTTTTAGGA+AGG | - | tig0019900:33373-33392 | None:intergenic | 30.0% |
!!! | TGGGTTTTTTGTTTGCATAT+TGG | + | tig0019900:33431-33450 | Msa1377320:intron | 30.0% |
ATTAGCTAAAAGTTGAATGC+TGG | + | tig0019900:33493-33512 | Msa1377320:intron | 30.0% | |
! | AATTATTTGGAGCAACTTGT+CGG | + | tig0019900:33845-33864 | Msa1377320:intron | 30.0% |
TTTCATGATTGCTTCATTCA+AGG | - | tig0019900:34360-34379 | None:intergenic | 30.0% | |
CAAACAGTACTAATGTCAAA+CGG | - | tig0019900:34711-34730 | None:intergenic | 30.0% | |
AATGATTCTACTCTTTCTGA+AGG | + | tig0019900:34779-34798 | Msa1377320:intron | 30.0% | |
ATGATTCTACTCTTTCTGAA+GGG | + | tig0019900:34780-34799 | Msa1377320:intron | 30.0% | |
TATGAAGCTAGGATTTCTTT+AGG | - | tig0019900:34810-34829 | None:intergenic | 30.0% | |
! | CTGTATTTTCAAAGATTCTC+AGG | - | tig0019900:34879-34898 | None:intergenic | 30.0% |
ATGTGTTGTGAAGTTCATTA+AGG | + | tig0019900:34961-34980 | Msa1377320:intron | 30.0% | |
TGTGTTGTGAAGTTCATTAA+GGG | + | tig0019900:34962-34981 | Msa1377320:intron | 30.0% | |
CCAATTATAAACACATTGCT+GGG | - | tig0019900:35096-35115 | None:intergenic | 30.0% | |
CCAGCAATGTGTTTATAATT+GGG | + | tig0019900:35094-35113 | Msa1377320:intron | 30.0% | |
CAGCAATGTGTTTATAATTG+GGG | + | tig0019900:35095-35114 | Msa1377320:intron | 30.0% | |
AGCAATGTGTTTATAATTGG+GGG | + | tig0019900:35096-35115 | Msa1377320:intron | 30.0% | |
!! | CGGTTTTGTAAGTTTAAGTT+AGG | + | tig0019900:35137-35156 | Msa1377320:intron | 30.0% |
! | AGTATCTTAGAATTTGGGTT+GGG | - | tig0019900:35398-35417 | None:intergenic | 30.0% |
AAGTATCTTAGAATTTGGGT+TGG | - | tig0019900:35399-35418 | None:intergenic | 30.0% | |
ATAAACACTCAGATATGTGT+TGG | + | tig0019900:35422-35441 | Msa1377320:intron | 30.0% | |
TAAACACTCAGATATGTGTT+GGG | + | tig0019900:35423-35442 | Msa1377320:intron | 30.0% | |
CTGATCCCATGTAATTAATT+GGG | + | tig0019900:35545-35564 | Msa1377320:intron | 30.0% | |
TCCTACCCAATTAATTACAT+GGG | - | tig0019900:35553-35572 | None:intergenic | 30.0% | |
ATCCTACCCAATTAATTACA+TGG | - | tig0019900:35554-35573 | None:intergenic | 30.0% | |
TATCATTCTCAATGTTGTCA+AGG | - | tig0019900:35649-35668 | None:intergenic | 30.0% | |
AGGAAACTGATAGTCTTTAA+TGG | + | tig0019900:35916-35935 | Msa1377320:intron | 30.0% | |
ACTAAAAAGAGTCCTCAAAT+AGG | + | tig0019900:36006-36025 | Msa1377320:intron | 30.0% | |
ACTAAAAAGAGTCCTCAAAT+AGG | + | tig0019900:36006-36025 | Msa1377320:intron | 30.0% | |
! | TCTCATGAATTTGAAATGGT+GGG | + | tig0019900:36157-36176 | Msa1377320:intron | 30.0% |
ATTGGAGGAAGGAAAAAAAT+GGG | - | tig0019900:36264-36283 | None:intergenic | 30.0% | |
!!! | ATTTTTTTCCTTCCTCCAAT+GGG | + | tig0019900:36264-36283 | Msa1377320:intron | 30.0% |
AATAACTCCCAATTATTTCC+TGG | + | tig0019900:36417-36436 | Msa1377320:CDS | 30.0% | |
CTAACTTCCAGGAAATAATT+GGG | - | tig0019900:36427-36446 | None:intergenic | 30.0% | |
ACTAACTTCCAGGAAATAAT+TGG | - | tig0019900:36428-36447 | None:intergenic | 30.0% | |
AATTATTTCCTGGAAGTTAG+TGG | + | tig0019900:36427-36446 | Msa1377320:CDS | 30.0% | |
ATTTGAATAACCATCTCCTT+TGG | - | tig0019900:36585-36604 | None:intergenic | 30.0% | |
CATCTCATACGTATGAAATA+GGG | + | tig0019900:36757-36776 | Msa1377320:intron | 30.0% | |
! | TACCAGTTTGTTTAATCTTG+TGG | + | tig0019900:36780-36799 | Msa1377320:intron | 30.0% |
ATCCACAAGATTAAACAAAC+TGG | - | tig0019900:36785-36804 | None:intergenic | 30.0% | |
AATGGTAGGTGAAAATTAGA+AGG | - | tig0019900:36847-36866 | None:intergenic | 30.0% | |
! | TATCTGGTAAGAGTTATTTC+TGG | + | tig0019900:37109-37128 | Msa1377320:intron | 30.0% |
!! | TTTTTAATTATTGCATGCCG+AGG | - | tig0019900:37354-37373 | None:intergenic | 30.0% |
GCAATAAAATTATGTCCTTG+TGG | + | tig0019900:37607-37626 | Msa1377320:intron | 30.0% | |
TTGTTAGAAAATGAACCACA+AGG | - | tig0019900:37625-37644 | None:intergenic | 30.0% | |
! | ATTTTCTAACAAACCCTCAT+TGG | + | tig0019900:37633-37652 | Msa1377320:intron | 30.0% |
AAACATTGACCCCTATTTAT+AGG | + | tig0019900:37762-37781 | Msa1377320:intron | 30.0% | |
AACATTGACCCCTATTTATA+GGG | + | tig0019900:37763-37782 | Msa1377320:intron | 30.0% | |
CTATGTATCCCTATAAATAG+GGG | - | tig0019900:37774-37793 | None:intergenic | 30.0% | |
GTCTATGTATCCCTATAAAT+AGG | - | tig0019900:37776-37795 | None:intergenic | 30.0% | |
TTATCTTTCCAACTCTACAA+TGG | + | tig0019900:38070-38089 | Msa1377320:intron | 30.0% | |
TAACAATGTTTATGACTGTC+TGG | + | tig0019900:38108-38127 | Msa1377320:intron | 30.0% | |
! | TGTTTGATCTTATGCTTTTG+TGG | + | tig0019900:38140-38159 | Msa1377320:intron | 30.0% |
AGATGATAGAAAAAGGCAAT+CGG | - | tig0019900:38306-38325 | None:intergenic | 30.0% | |
! | ATTGCCTTTTTCTATCATCT+GGG | + | tig0019900:38306-38325 | Msa1377320:CDS | 30.0% |
! | CATAATTAGTTTCCAAGCTA+GGG | - | tig0019900:38439-38458 | None:intergenic | 30.0% |
! | TCATAATTAGTTTCCAAGCT+AGG | - | tig0019900:38440-38459 | None:intergenic | 30.0% |
! | GTCTACTCTTGTAAATTTTG+AGG | + | tig0019900:38685-38704 | Msa1377320:CDS | 30.0% |
TTTAGGTCTCTTAATCTCTA+GGG | - | tig0019900:38783-38802 | None:intergenic | 30.0% | |
AAAATACCTCAATTGCTCTT+TGG | - | tig0019900:38901-38920 | None:intergenic | 30.0% | |
TTAAGATCTAACTCGTAGAA+GGG | - | tig0019900:39282-39301 | None:intergenic | 30.0% | |
ATTAAGATCTAACTCGTAGA+AGG | - | tig0019900:39283-39302 | None:intergenic | 30.0% | |
TAATGCTTAATGATGTAGTG+TGG | + | tig0019900:39299-39318 | Msa1377320:intron | 30.0% | |
!!! | GGTTTTTTTAGGGTTTTGAA+GGG | - | tig0019900:39743-39762 | None:intergenic | 30.0% |
!!! | TGGTTTTTTTAGGGTTTTGA+AGG | - | tig0019900:39744-39763 | None:intergenic | 30.0% |
!!! | ATTGCGTGTTGGTTTTTTTA+GGG | - | tig0019900:39753-39772 | None:intergenic | 30.0% |
AAGACAAACTTTCTTTAGCA+TGG | + | tig0019900:39821-39840 | Msa1377320:intron | 30.0% | |
GACTACAGTGAAAAGAAATT+GGG | + | tig0019900:40127-40146 | Msa1377320:intron | 30.0% | |
TGACTGAAAAAATCAGACTT+TGG | - | tig0019900:40187-40206 | None:intergenic | 30.0% | |
! | TAGCATGATAAAGATGGATT+TGG | + | tig0019900:40244-40263 | Msa1377320:intron | 30.0% |
!! | TGGATTTGGTTAACTTTTTG+TGG | + | tig0019900:40258-40277 | Msa1377320:intron | 30.0% |
!!! | AGTTAGTTTTACCTTTTGTG+TGG | + | tig0019900:40303-40322 | Msa1377320:intron | 30.0% |
AATAACTGTAGCAATTGATG+GGG | + | tig0019900:40353-40372 | Msa1377320:intron | 30.0% | |
!!! | ATTTTTGAAGTAGATGCTGT+GGG | + | tig0019900:40428-40447 | Msa1377320:intron | 30.0% |
TCTAAATTTAATGCAGAGCA+AGG | - | tig0019900:40627-40646 | None:intergenic | 30.0% | |
! | GCATTAAATTTAGAATCTGC+TGG | + | tig0019900:40633-40652 | Msa1377320:CDS | 30.0% |
AAGCTCAATAACTTCCATAT+TGG | - | tig0019900:40679-40698 | None:intergenic | 30.0% | |
TATCTAAATGAGTACAACGT+TGG | - | tig0019900:40738-40757 | None:intergenic | 30.0% | |
! | ATGTGTTCGAATACAGATTT+TGG | + | tig0019900:40772-40791 | Msa1377320:intron | 30.0% |
! | TTTAGTGTTTTTCCGATCTT+GGG | - | tig0019900:40931-40950 | None:intergenic | 30.0% |
CTTAGTCATATGTACAAAAC+CGG | - | tig0019900:41096-41115 | None:intergenic | 30.0% | |
TGTATCAAAGCCTATCAATA+TGG | + | tig0019900:41138-41157 | Msa1377320:intron | 30.0% | |
GTATCAAAGCCTATCAATAT+GGG | + | tig0019900:41139-41158 | Msa1377320:intron | 30.0% | |
AATGTGTGGATATAAATGGT+GGG | - | tig0019900:41168-41187 | None:intergenic | 30.0% | |
TAATGTGTGGATATAAATGG+TGG | - | tig0019900:41169-41188 | None:intergenic | 30.0% | |
!! | CACAACTTTTTGAGAAGATA+AGG | + | tig0019900:41341-41360 | Msa1377320:intron | 30.0% |
!! | CAACTTTTTGAGAAGATAAG+GGG | + | tig0019900:41343-41362 | Msa1377320:intron | 30.0% |
GATCATATTTCCCTTATGTT+AGG | + | tig0019900:41372-41391 | Msa1377320:intron | 30.0% | |
TCATATTTCCCTTATGTTAG+GGG | + | tig0019900:41374-41393 | Msa1377320:intron | 30.0% | |
! | GTTTCAAAATGTTGCGATTT+TGG | - | tig0019900:41435-41454 | None:intergenic | 30.0% |
!!! | ATCGCAACATTTTGAAACTT+AGG | + | tig0019900:41437-41456 | Msa1377320:intron | 30.0% |
!!! | TCGCAACATTTTGAAACTTA+GGG | + | tig0019900:41438-41457 | Msa1377320:intron | 30.0% |
CTAACTCATCCTTACAAAAT+TGG | - | tig0019900:41567-41586 | None:intergenic | 30.0% | |
! | CAATTTTGTAAGGATGAGTT+AGG | + | tig0019900:41565-41584 | Msa1377320:intron | 30.0% |
CTAACTCTGATAGAACATTA+TGG | - | tig0019900:41658-41677 | None:intergenic | 30.0% | |
CATAATGTTCTATCAGAGTT+AGG | + | tig0019900:41656-41675 | Msa1377320:intron | 30.0% | |
!! | TTAGGCTTTGTTTGTAAGTT+TGG | + | tig0019900:41850-41869 | Msa1377320:intron | 30.0% |
GAAAAAAAAAAAGGAGCAAG+TGG | + | tig0019900:41899-41918 | Msa1377320:intron | 30.0% | |
GAAATAGATGATATTGAGAG+GGG | + | tig0019900:41924-41943 | Msa1377320:intron | 30.0% | |
AATACAAAACCCTCTTCATT+TGG | + | tig0019900:41975-41994 | Msa1377320:intron | 30.0% | |
ATACAAAACCCTCTTCATTT+GGG | + | tig0019900:41976-41995 | Msa1377320:intron | 30.0% | |
GGGGAACTAAAAAAATGTAT+TGG | + | tig0019900:41996-42015 | Msa1377320:intron | 30.0% | |
CTAAAAAAATGTATTGGAGG+AGG | + | tig0019900:42002-42021 | Msa1377320:intron | 30.0% | |
! | TAAGTGCTCCTATTTTCAAT+AGG | + | tig0019900:42372-42391 | Msa1377320:intron | 30.0% |
ATTAAGCATTTCAAATGGGA+AGG | - | tig0019900:42680-42699 | None:intergenic | 30.0% | |
! | AATGCTTAATTTGATCATGC+TGG | + | tig0019900:42690-42709 | Msa1377320:intron | 30.0% |
! | TTAATTTGATCATGCTGGAA+TGG | + | tig0019900:42695-42714 | Msa1377320:intron | 30.0% |
! | TTCTCATAAATGGTGTCAAA+CGG | + | tig0019900:42882-42901 | Msa1377320:CDS | 30.0% |
AAAATTCTCATAAGTGGCAT+AGG | - | tig0019900:42908-42927 | None:intergenic | 30.0% | |
!! | GTTGCTTTCTATTTTACTAG+CGG | + | tig0019900:43105-43124 | Msa1377320:intron | 30.0% |
! | TTTCTATTTTACTAGCGGAA+AGG | + | tig0019900:43110-43129 | Msa1377320:intron | 30.0% |
AAATATATTCTCCAGCTTGA+GGG | - | tig0019900:43612-43631 | None:intergenic | 30.0% | |
AAAATATATTCTCCAGCTTG+AGG | - | tig0019900:43613-43632 | None:intergenic | 30.0% | |
TGATGTCATTAAAACCTCTT+CGG | - | tig0019900:43725-43744 | None:intergenic | 30.0% | |
! | AGTAGATTAGAGCATCAAAA+CGG | + | tig0019900:43843-43862 | Msa1377320:intron | 30.0% |
TAAAACAACAGAAGTCACAA+AGG | - | tig0019900:43890-43909 | None:intergenic | 30.0% | |
AAGTTTACTTTATCAAGCAG+TGG | + | tig0019900:43909-43928 | Msa1377320:intron | 30.0% | |
! | CTGTCCCGTTTAAAATTTAA+TGG | - | tig0019900:43944-43963 | None:intergenic | 30.0% |
ACTGCTTGATATAGTTACAA+AGG | - | tig0019900:43982-44001 | None:intergenic | 30.0% | |
CAGGAAAATTAAAGACAACT+TGG | - | tig0019900:44036-44055 | None:intergenic | 30.0% | |
AAAGTAGTGAAAGAAGGTAA+CGG | - | tig0019900:44152-44171 | None:intergenic | 30.0% | |
TTTACGTGTTAAAGGTTGTT+TGG | + | tig0019900:44276-44295 | Msa1377320:CDS | 30.0% | |
! | ATCAAAGGCTGAAAATCTTT+TGG | + | tig0019900:44303-44322 | Msa1377320:CDS | 30.0% |
!! | AGCTTCAGATGACTATTTTT+CGG | + | tig0019900:44431-44450 | Msa1377320:CDS | 30.0% |
ATCTACAATCTGTAAATCAG+AGG | - | tig0019900:44482-44501 | None:intergenic | 30.0% | |
AATTCTTGAAAAGGCTAAAG+TGG | + | tig0019900:44771-44790 | Msa1377320:intron | 30.0% | |
GATAGATGTGAAGTCTAAAT+TGG | + | tig0019900:45300-45319 | Msa1377320:intron | 30.0% | |
TCAAATTCTGTTAGTTAAGC+AGG | - | tig0019900:45357-45376 | None:intergenic | 30.0% | |
! | AAATTTGGAATCCATATTCC+TGG | + | tig0019900:45505-45524 | Msa1377320:intron | 30.0% |
CAGTGGATAGTTGAAATTAA+CGG | + | tig0019900:45826-45845 | Msa1377320:CDS | 30.0% | |
TCTAACTAGGAAGAAAAGAA+AGG | - | tig0019900:45939-45958 | None:intergenic | 30.0% | |
AGCTTATATTTAGTATGGCA+TGG | + | tig0019900:45958-45977 | Msa1377320:intron | 30.0% | |
! | ACTCTAAAAGCAATAACTTG+TGG | - | tig0019900:46166-46185 | None:intergenic | 30.0% |
!!! | AGTTATTGCTTTTAGAGTTG+AGG | + | tig0019900:46168-46187 | Msa1377320:intron | 30.0% |
! | GTGTGTGTGTTTTACAAGTA+AGG | - | tig0019900:28167-28186 | None:intergenic | 35.0% |
!! | ACTATTGGTTTCTCTCAGAA+AGG | + | tig0019900:28207-28226 | Msa1377320:five_prime_UTR | 35.0% |
!! | CTATTGGTTTCTCTCAGAAA+GGG | + | tig0019900:28208-28227 | Msa1377320:five_prime_UTR | 35.0% |
TAACAACATTCATCAATGGG+AGG | + | tig0019900:28241-28260 | Msa1377320:exon | 35.0% | |
TTCATCAATGGGAGGTTTAA+CGG | + | tig0019900:28249-28268 | Msa1377320:exon | 35.0% | |
GTGTCTTAAGAAAGTAGTTC+CGG | + | tig0019900:28378-28397 | Msa1377320:CDS | 35.0% | |
ATGAAGAGAAAATACTCACC+AGG | - | tig0019900:28532-28551 | None:intergenic | 35.0% | |
GCAGTAGATAAGCTCATTTA+GGG | - | tig0019900:29223-29242 | None:intergenic | 35.0% | |
TGCAGTAGATAAGCTCATTT+AGG | - | tig0019900:29224-29243 | None:intergenic | 35.0% | |
AACCAACTGTATACTTCTCT+AGG | + | tig0019900:29698-29717 | Msa1377320:intron | 35.0% | |
! | TACCTAGAGAAGTATACAGT+TGG | - | tig0019900:29703-29722 | None:intergenic | 35.0% |
! | CTTCTCTAGGTACATGATTT+TGG | + | tig0019900:29711-29730 | Msa1377320:intron | 35.0% |
GGATTAGAAATCAGAGTTGT+TGG | + | tig0019900:29813-29832 | Msa1377320:CDS | 35.0% | |
!! | AGAGTTGTTGGTAATGATAG+TGG | + | tig0019900:29825-29844 | Msa1377320:CDS | 35.0% |
! | TTCATCTCTGATTTTGTCTC+TGG | + | tig0019900:29871-29890 | Msa1377320:intron | 35.0% |
! | GGTTCTTGACAATTTTCTCA+TGG | + | tig0019900:29966-29985 | Msa1377320:intron | 35.0% |
GTCCTCAATTTAAAAATGCC+AGG | - | tig0019900:30035-30054 | None:intergenic | 35.0% | |
ATCCCTTTGTTAGAATGAGT+CGG | + | tig0019900:30065-30084 | Msa1377320:intron | 35.0% | |
!!! | TTTTTTTAGGAGTGTTGTCG+TGG | + | tig0019900:30318-30337 | Msa1377320:intron | 35.0% |
TACTATTGCTCGTTTGGATA+GGG | + | tig0019900:30410-30429 | Msa1377320:CDS | 35.0% | |
GCTCCAATCTATAAGATGTA+CGG | + | tig0019900:30435-30454 | Msa1377320:CDS | 35.0% | |
AAATTCAAGCTACTCAAGGA+AGG | - | tig0019900:30505-30524 | None:intergenic | 35.0% | |
!!! | ACTATTTTTTGATGCAGGGA+TGG | + | tig0019900:30535-30554 | Msa1377320:intron | 35.0% |
!!! | CTATTTTTTGATGCAGGGAT+GGG | + | tig0019900:30536-30555 | Msa1377320:intron | 35.0% |
TATGCAAATGTGAGTCATTC+TGG | + | tig0019900:30692-30711 | Msa1377320:intron | 35.0% | |
TTGAAGACTTGAGCAACAAA+TGG | + | tig0019900:31042-31061 | Msa1377320:intron | 35.0% | |
GGAGATGAAGAAGACAAAAT+TGG | + | tig0019900:31063-31082 | Msa1377320:intron | 35.0% | |
GAACACTTAAAATACAACCC+AGG | - | tig0019900:31236-31255 | None:intergenic | 35.0% | |
GCTTCATTACTTAAAATGCC+AGG | + | tig0019900:31344-31363 | Msa1377320:intron | 35.0% | |
! | GCCAAATGAAGGCATAAAAT+TGG | - | tig0019900:31398-31417 | None:intergenic | 35.0% |
TACCTTGCCAATCTATAACT+GGG | - | tig0019900:31562-31581 | None:intergenic | 35.0% | |
AGTTATAGATTGGCAAGGTA+GGG | + | tig0019900:31562-31581 | Msa1377320:CDS | 35.0% | |
GGCATTAAGGTTTCTTCAAA+AGG | + | tig0019900:31743-31762 | Msa1377320:CDS | 35.0% | |
!!! | AGTTGCAATCTTTTGGAACT+TGG | + | tig0019900:32058-32077 | Msa1377320:intron | 35.0% |
GCACTAAAGAAATTTCGGAT+TGG | - | tig0019900:32314-32333 | None:intergenic | 35.0% | |
GGAGCAAATTAAAGATCTGA+GGG | - | tig0019900:32542-32561 | None:intergenic | 35.0% | |
AGGAGCAAATTAAAGATCTG+AGG | - | tig0019900:32543-32562 | None:intergenic | 35.0% | |
TTATAGACGCGTTTCCATAT+TGG | + | tig0019900:32573-32592 | Msa1377320:intron | 35.0% | |
CAATCATCTCAAGTCCAATA+TGG | - | tig0019900:32590-32609 | None:intergenic | 35.0% | |
ATTGGACTTGAGATGATTGT+AGG | + | tig0019900:32591-32610 | Msa1377320:intron | 35.0% | |
ATTGTGGATGAGATGATTGT+AGG | + | tig0019900:32701-32720 | Msa1377320:intron | 35.0% | |
TTGTGGATGAGATGATTGTA+GGG | + | tig0019900:32702-32721 | Msa1377320:intron | 35.0% | |
GGATGTTTCATTTGGATATG+AGG | + | tig0019900:32907-32926 | Msa1377320:intron | 35.0% | |
! | AGGCAACTTTTCTCCATAAA+GGG | + | tig0019900:32953-32972 | Msa1377320:intron | 35.0% |
AAGGTGGAGTAAATAATGCA+GGG | - | tig0019900:33093-33112 | None:intergenic | 35.0% | |
AAAGGTGGAGTAAATAATGC+AGG | - | tig0019900:33094-33113 | None:intergenic | 35.0% | |
! | AGTTTGTTTGACACTTTGAC+TGG | + | tig0019900:33336-33355 | Msa1377320:intron | 35.0% |
!!! | ATCGTCTGCATCCTTTTTTT+TGG | + | tig0019900:33411-33430 | Msa1377320:intron | 35.0% |
!!! | TCGTCTGCATCCTTTTTTTT+GGG | + | tig0019900:33412-33431 | Msa1377320:intron | 35.0% |
! | ATTATTTGGAGCAACTTGTC+GGG | + | tig0019900:33846-33865 | Msa1377320:intron | 35.0% |
GTATATCATTAGCAACGGTT+TGG | - | tig0019900:33898-33917 | None:intergenic | 35.0% | |
! | ACATAATTGTGGTGATGAGA+AGG | + | tig0019900:33916-33935 | Msa1377320:intron | 35.0% |
!! | AAGGTAAGGTGTTGTTGTTT+GGG | + | tig0019900:33935-33954 | Msa1377320:intron | 35.0% |
GTGTTTGGATTATGTGTATG+TGG | + | tig0019900:34015-34034 | Msa1377320:intron | 35.0% | |
!!! | AGAGGTTTTGACTCAACTTT+TGG | + | tig0019900:34055-34074 | Msa1377320:intron | 35.0% |
!!! | ACTCAACTTTTGGTTTACGT+TGG | + | tig0019900:34065-34084 | Msa1377320:intron | 35.0% |
!! | TTTGGTTTACGTTGGTTTGT+AGG | + | tig0019900:34073-34092 | Msa1377320:intron | 35.0% |
!! | TTGGTTTACGTTGGTTTGTA+GGG | + | tig0019900:34074-34093 | Msa1377320:intron | 35.0% |
!!! | TGGTGTTGATTTGGTTTTAG+AGG | + | tig0019900:34111-34130 | Msa1377320:intron | 35.0% |
ATGATTGCTTCATTCAAGGA+TGG | - | tig0019900:34356-34375 | None:intergenic | 35.0% | |
CATTACTCAATTCCTGAAAC+TGG | + | tig0019900:34564-34583 | Msa1377320:CDS | 35.0% | |
GTCCTACATTTGATGAGATA+AGG | + | tig0019900:35070-35089 | Msa1377320:intron | 35.0% | |
CCCAGCAATGTGTTTATAAT+TGG | + | tig0019900:35093-35112 | Msa1377320:intron | 35.0% | |
CCCAATTATAAACACATTGC+TGG | - | tig0019900:35097-35116 | None:intergenic | 35.0% | |
! | ACCATCTTAGAATTTGGGTT+GGG | - | tig0019900:35163-35182 | None:intergenic | 35.0% |
TACCATCTTAGAATTTGGGT+TGG | - | tig0019900:35164-35183 | None:intergenic | 35.0% | |
AACTGTTAAGAGTCTCACAT+TGG | + | tig0019900:35293-35312 | Msa1377320:intron | 35.0% | |
!! | TCTTACAATCCGGTTTTGTA+AGG | + | tig0019900:35362-35381 | Msa1377320:intron | 35.0% |
CTAACTCAACCTTACAAAAC+CGG | - | tig0019900:35374-35393 | None:intergenic | 35.0% | |
TTAATTACATGGGATCAGGA+GGG | - | tig0019900:35543-35562 | None:intergenic | 35.0% | |
ATTAATTACATGGGATCAGG+AGG | - | tig0019900:35544-35563 | None:intergenic | 35.0% | |
CCAATTAATTACATGGGATC+AGG | - | tig0019900:35547-35566 | None:intergenic | 35.0% | |
CCTGATCCCATGTAATTAAT+TGG | + | tig0019900:35544-35563 | Msa1377320:intron | 35.0% | |
TCCCATGTAATTAATTGGGT+AGG | + | tig0019900:35549-35568 | Msa1377320:intron | 35.0% | |
TCGAGATCTTACTTAAGATC+CGG | - | tig0019900:35626-35645 | None:intergenic | 35.0% | |
TCAAACATCACATGGTGATA+TGG | + | tig0019900:35799-35818 | Msa1377320:intron | 35.0% | |
TTAGGACTCAATGACTTCAA+TGG | + | tig0019900:35977-35996 | Msa1377320:intron | 35.0% | |
ATATTAGTGGGACCTATTTG+AGG | - | tig0019900:36021-36040 | None:intergenic | 35.0% | |
ATATTAGTGGGACCTATTTG+AGG | - | tig0019900:36021-36040 | None:intergenic | 35.0% | |
! | GTCTCATGAATTTGAAATGG+TGG | + | tig0019900:36156-36175 | Msa1377320:intron | 35.0% |
TGCATTCCTATATTAATCGC+AGG | + | tig0019900:36197-36216 | Msa1377320:intron | 35.0% | |
TCTCTCTCTTCAACAACTAA+CGG | - | tig0019900:36225-36244 | None:intergenic | 35.0% | |
CATTGGAGGAAGGAAAAAAA+TGG | - | tig0019900:36265-36284 | None:intergenic | 35.0% | |
!!! | CATTTTTTTCCTTCCTCCAA+TGG | + | tig0019900:36263-36282 | Msa1377320:intron | 35.0% |
!!! | TTTTTTTCCTTCCTCCAATG+GGG | + | tig0019900:36265-36284 | Msa1377320:intron | 35.0% |
ATGGAGTCCCTATTAGATAA+AGG | + | tig0019900:36300-36319 | Msa1377320:intron | 35.0% | |
AGTCAAATAACAAGCCAATG+GGG | - | tig0019900:36329-36348 | None:intergenic | 35.0% | |
CAGTCAAATAACAAGCCAAT+GGG | - | tig0019900:36330-36349 | None:intergenic | 35.0% | |
ACAGTCAAATAACAAGCCAA+TGG | - | tig0019900:36331-36350 | None:intergenic | 35.0% | |
GATGGAAAATTGACCATTCA+TGG | - | tig0019900:36741-36760 | None:intergenic | 35.0% | |
CCTATTTCATACGTATGAGA+TGG | - | tig0019900:36759-36778 | None:intergenic | 35.0% | |
CCATCTCATACGTATGAAAT+AGG | + | tig0019900:36756-36775 | Msa1377320:intron | 35.0% | |
TTATCTAGGTATACATACCC+TGG | - | tig0019900:36949-36968 | None:intergenic | 35.0% | |
!! | AGATATATGCTCTCTAAAGC+AGG | + | tig0019900:37324-37343 | Msa1377320:intron | 35.0% |
AGTTCTGTCTAAGCTATCAA+GGG | + | tig0019900:37416-37435 | Msa1377320:CDS | 35.0% | |
ATTGGAGTATATAAGCTACG+CGG | + | tig0019900:37452-37471 | Msa1377320:CDS | 35.0% | |
TGCACGCTGAAAGTTTAAAA+AGG | - | tig0019900:37590-37609 | None:intergenic | 35.0% | |
AGTAGGAGAGAAGTAATAAG+AGG | + | tig0019900:37703-37722 | Msa1377320:intron | 35.0% | |
! | CTCGATTTCCCTATTGATTA+AGG | - | tig0019900:37806-37825 | None:intergenic | 35.0% |
ACTTAACACCATTGTAGAGT+TGG | - | tig0019900:38081-38100 | None:intergenic | 35.0% | |
ACTTTCATGAACTTGTCTGA+TGG | + | tig0019900:38171-38190 | Msa1377320:intron | 35.0% | |
GATGATAGAAAAAGGCAATC+GGG | - | tig0019900:38305-38324 | None:intergenic | 35.0% | |
! | GATTGCCTTTTTCTATCATC+TGG | + | tig0019900:38305-38324 | Msa1377320:CDS | 35.0% |
! | TTGCCTTTTTCTATCATCTG+GGG | + | tig0019900:38307-38326 | Msa1377320:CDS | 35.0% |
AGTCAATGAAATTGGATGAC+TGG | - | tig0019900:38354-38373 | None:intergenic | 35.0% | |
AGTCATCCAATTTCATTGAC+TGG | + | tig0019900:38353-38372 | Msa1377320:CDS | 35.0% | |
GTAAACAAACAGAGAGTAGA+TGG | + | tig0019900:38506-38525 | Msa1377320:CDS | 35.0% | |
GTAGATGGTTTATCAACTGA+TGG | + | tig0019900:38521-38540 | Msa1377320:CDS | 35.0% | |
CATTAACCCATCATCTTGTA+TGG | - | tig0019900:38606-38625 | None:intergenic | 35.0% | |
!! | CATACAAGATGATGGGTTAA+TGG | + | tig0019900:38604-38623 | Msa1377320:CDS | 35.0% |
!! | TTCTGATCATTGACTTGACT+TGG | + | tig0019900:38730-38749 | Msa1377320:intron | 35.0% |
CATAAATATTACTGCAGCCA+GGG | + | tig0019900:38753-38772 | Msa1377320:intron | 35.0% | |
CTTTAGGTCTCTTAATCTCT+AGG | - | tig0019900:38784-38803 | None:intergenic | 35.0% | |
ACATTTGTCCGTGTAAAACA+GGG | - | tig0019900:39049-39068 | None:intergenic | 35.0% | |
TAAGATCTAACTCGTAGAAG+GGG | - | tig0019900:39281-39300 | None:intergenic | 35.0% | |
ATGAACACAATCAAGCATAC+AGG | - | tig0019900:39395-39414 | None:intergenic | 35.0% | |
GTTCATTCACAGTCCTTTAT+TGG | + | tig0019900:39409-39428 | Msa1377320:CDS | 35.0% | |
TATGACACCAGTTCCAATAA+AGG | - | tig0019900:39425-39444 | None:intergenic | 35.0% | |
!! | TGTGTTTGCAAGTTGGATTT+TGG | + | tig0019900:39573-39592 | Msa1377320:intron | 35.0% |
!! | TTTGCAAGTTGGATTTTGGA+GGG | + | tig0019900:39577-39596 | Msa1377320:intron | 35.0% |
!!! | GATTGCGTGTTGGTTTTTTT+AGG | - | tig0019900:39754-39773 | None:intergenic | 35.0% |
! | ATGAGAGCATAATTGTGAAC+AGG | - | tig0019900:39882-39901 | None:intergenic | 35.0% |
ATCATATGATCCATCTGCTT+TGG | + | tig0019900:39902-39921 | Msa1377320:CDS | 35.0% | |
TCATATGATCCATCTGCTTT+GGG | + | tig0019900:39903-39922 | Msa1377320:CDS | 35.0% | |
CTTCATCATCAAAAGTGGAT+TGG | - | tig0019900:40025-40044 | None:intergenic | 35.0% | |
ACGATCTTCATCATCAAAAG+TGG | - | tig0019900:40030-40049 | None:intergenic | 35.0% | |
GGACTACAGTGAAAAGAAAT+TGG | + | tig0019900:40126-40145 | Msa1377320:intron | 35.0% | |
ATCTTTCTGTCAAGTCAAAC+AGG | + | tig0019900:40206-40225 | Msa1377320:intron | 35.0% | |
GTAATCAACTTCCACACAAA+AGG | - | tig0019900:40317-40336 | None:intergenic | 35.0% | |
ATAACTGTAGCAATTGATGG+GGG | + | tig0019900:40354-40373 | Msa1377320:intron | 35.0% | |
!!! | CATTTTTGAAGTAGATGCTG+TGG | + | tig0019900:40427-40446 | Msa1377320:intron | 35.0% |
! | TACATTTTCTTATCCAGAGC+CGG | + | tig0019900:40518-40537 | Msa1377320:intron | 35.0% |
! | AGGAGATTCTGTTTACCTTT+TGG | + | tig0019900:40551-40570 | Msa1377320:CDS | 35.0% |
! | GGAGATTCTGTTTACCTTTT+GGG | + | tig0019900:40552-40571 | Msa1377320:CDS | 35.0% |
ATTTAATGCAGAGCAAGGAT+TGG | - | tig0019900:40622-40641 | None:intergenic | 35.0% | |
GAAGTTATTGAGCTTGATAC+TGG | + | tig0019900:40684-40703 | Msa1377320:CDS | 35.0% | |
GAGCTTGATACTGGTAAATT+TGG | + | tig0019900:40693-40712 | Msa1377320:intron | 35.0% | |
!!! | GATTTTGGTCTTGCAATTTC+TGG | + | tig0019900:40787-40806 | Msa1377320:intron | 35.0% |
TAAGCAAGCAAGAGAATAAC+TGG | - | tig0019900:40878-40897 | None:intergenic | 35.0% | |
AAAAATGTCAAGATCAACCC+TGG | - | tig0019900:40901-40920 | None:intergenic | 35.0% | |
! | TTTTTCATTGGACCCAAGAT+CGG | + | tig0019900:40916-40935 | Msa1377320:intron | 35.0% |
! | CTTTAGTGTTTTTCCGATCT+TGG | - | tig0019900:40932-40951 | None:intergenic | 35.0% |
!! | CGGTTTTGTACATATGACTA+AGG | + | tig0019900:41094-41113 | Msa1377320:intron | 35.0% |
ACATTAATCCCAATAGTGCT+GGG | + | tig0019900:41183-41202 | Msa1377320:intron | 35.0% | |
GGGGTGTACTGAAAAAAAAA+AGG | + | tig0019900:41212-41231 | Msa1377320:intron | 35.0% | |
!!! | TGTGATTATGGCCCTTTTTT+GGG | - | tig0019900:41325-41344 | None:intergenic | 35.0% |
!!! | TTGTGATTATGGCCCTTTTT+TGG | - | tig0019900:41326-41345 | None:intergenic | 35.0% |
CATATTTCCCTTATGTTAGG+GGG | + | tig0019900:41375-41394 | Msa1377320:intron | 35.0% | |
!! | ATTTTGACCCCCTAACATAA+GGG | - | tig0019900:41385-41404 | None:intergenic | 35.0% |
!!! | CGCAACATTTTGAAACTTAG+GGG | + | tig0019900:41439-41458 | Msa1377320:intron | 35.0% |
!! | AAAATTGGCTTGTAAGGTGA+GGG | - | tig0019900:41552-41571 | None:intergenic | 35.0% |
!! | CCTTACAAAATTGGCTTGTA+AGG | - | tig0019900:41558-41577 | None:intergenic | 35.0% |
! | CCTTACAAGCCAATTTTGTA+AGG | + | tig0019900:41555-41574 | Msa1377320:intron | 35.0% |
! | TTGGTTGTTGTTGTTGTTGT+GGG | - | tig0019900:41591-41610 | None:intergenic | 35.0% |
GGGTTTGGGGAAAAAAAAAA+AGG | + | tig0019900:41890-41909 | Msa1377320:intron | 35.0% | |
TACAAAACCCTCTTCATTTG+GGG | + | tig0019900:41977-41996 | Msa1377320:intron | 35.0% | |
! | TTTAGTTCCCCAAATGAAGA+GGG | - | tig0019900:41987-42006 | None:intergenic | 35.0% |
!!! | TTTTAGTTCCCCAAATGAAG+AGG | - | tig0019900:41988-42007 | None:intergenic | 35.0% |
!! | ATAGCACTAAGGCTTTGTTT+GGG | - | tig0019900:42215-42234 | None:intergenic | 35.0% |
!! | AATAGCACTAAGGCTTTGTT+TGG | - | tig0019900:42216-42235 | None:intergenic | 35.0% |
!! | AATAGGAGCACTTAAGTCTT+AGG | - | tig0019900:42366-42385 | None:intergenic | 35.0% |
ATAACTATTCACCAGCTTGA+GGG | - | tig0019900:42432-42451 | None:intergenic | 35.0% | |
AATAACTATTCACCAGCTTG+AGG | - | tig0019900:42433-42452 | None:intergenic | 35.0% | |
GGTTGTTAGACACTTCATTA+AGG | - | tig0019900:42573-42592 | None:intergenic | 35.0% | |
TTAGTTCGATCATACTGAGT+TGG | + | tig0019900:42602-42621 | Msa1377320:intron | 35.0% | |
TTATCGTAGTAGAGCTTCAT+AGG | + | tig0019900:42653-42672 | Msa1377320:intron | 35.0% | |
ACCTGGCTTATCGAATAAAT+CGG | - | tig0019900:42824-42843 | None:intergenic | 35.0% | |
TTGACACCATTTATGAGAAG+AGG | - | tig0019900:42881-42900 | None:intergenic | 35.0% | |
ACTAAGTGATGTTTGGATTC+AGG | + | tig0019900:42976-42995 | Msa1377320:CDS | 35.0% | |
CAGGTATGGATATTCCTTTA+TGG | + | tig0019900:42995-43014 | Msa1377320:intron | 35.0% | |
AGTGAAAACACAGACCATAA+AGG | - | tig0019900:43012-43031 | None:intergenic | 35.0% | |
! | AATTTGTTCAAGGGTGTAAC+TGG | + | tig0019900:43373-43392 | Msa1377320:intron | 35.0% |
! | TAAAGGGAATAAGGGGTTTT+AGG | - | tig0019900:43416-43435 | None:intergenic | 35.0% |
AAGAGAGAATCTCTCAAGAA+AGG | + | tig0019900:43527-43546 | Msa1377320:intron | 35.0% | |
AATATATTCTCCAGCTTGAG+GGG | - | tig0019900:43611-43630 | None:intergenic | 35.0% | |
! | CTAAGGTGTTTGTAGAGATT+TGG | + | tig0019900:43666-43685 | Msa1377320:intron | 35.0% |
! | GTAGATTAGAGCATCAAAAC+GGG | + | tig0019900:43844-43863 | Msa1377320:intron | 35.0% |
AACGGGACAGTATACTTAAA+TGG | + | tig0019900:43861-43880 | Msa1377320:intron | 35.0% | |
AAACGGGACAGTTAACTTAA+TGG | + | tig0019900:43953-43972 | Msa1377320:intron | 35.0% | |
ATCAAGCAGTGTTGTAGAAT+TGG | + | tig0019900:43992-44011 | Msa1377320:intron | 35.0% | |
! | GTAAAACCTGTCGTCTTATT+GGG | - | tig0019900:44261-44280 | None:intergenic | 35.0% |
!!! | CTGAAAATCTTTTGGAGCAA+GGG | + | tig0019900:44311-44330 | Msa1377320:CDS | 35.0% |
!!! | TGAAAATCTTTTGGAGCAAG+GGG | + | tig0019900:44312-44331 | Msa1377320:CDS | 35.0% |
! | GGCAAGCATTTTCAATATCA+AGG | - | tig0019900:44378-44397 | None:intergenic | 35.0% |
ACAATCTGTAAATCAGAGGA+GGG | - | tig0019900:44478-44497 | None:intergenic | 35.0% | |
TACAATCTGTAAATCAGAGG+AGG | - | tig0019900:44479-44498 | None:intergenic | 35.0% | |
TCTTGGATTTCTTCCTAATG+AGG | + | tig0019900:44694-44713 | Msa1377320:CDS | 35.0% | |
CTTGGATTTCTTCCTAATGA+GGG | + | tig0019900:44695-44714 | Msa1377320:CDS | 35.0% | |
TTTCTTCCTAATGAGGGTTA+TGG | + | tig0019900:44701-44720 | Msa1377320:CDS | 35.0% | |
AATACACCATAACCCTCATT+AGG | - | tig0019900:44710-44729 | None:intergenic | 35.0% | |
AATGAGGGTTATGGTGTATT+TGG | + | tig0019900:44710-44729 | Msa1377320:CDS | 35.0% | |
ATGAGGGTTATGGTGTATTT+GGG | + | tig0019900:44711-44730 | Msa1377320:CDS | 35.0% | |
GTGATTAATGAATAGCAGCA+TGG | + | tig0019900:44793-44812 | Msa1377320:intron | 35.0% | |
TTAATGAATAGCAGCATGGT+AGG | + | tig0019900:44797-44816 | Msa1377320:intron | 35.0% | |
TAGCTTCTGTAGAAAACAGT+AGG | + | tig0019900:45016-45035 | Msa1377320:intron | 35.0% | |
AGCTTCTGTAGAAAACAGTA+GGG | + | tig0019900:45017-45036 | Msa1377320:intron | 35.0% | |
!! | AGTAGGCTTTTTCTCTTAGT+GGG | - | tig0019900:45153-45172 | None:intergenic | 35.0% |
!! | AAGTAGGCTTTTTCTCTTAG+TGG | - | tig0019900:45154-45173 | None:intergenic | 35.0% |
! | AGAGACATGACAGCAATTTT+GGG | - | tig0019900:45240-45259 | None:intergenic | 35.0% |
! | TAGAGACATGACAGCAATTT+TGG | - | tig0019900:45241-45260 | None:intergenic | 35.0% |
AAAATGCAGATGTATGCAAG+TGG | - | tig0019900:45395-45414 | None:intergenic | 35.0% | |
TTGCATACAATTGTGCAGAT+TGG | + | tig0019900:45413-45432 | Msa1377320:intron | 35.0% | |
TGCATACAATTGTGCAGATT+GGG | + | tig0019900:45414-45433 | Msa1377320:intron | 35.0% | |
AAGCATACAATGCAAAATGC+TGG | - | tig0019900:45732-45751 | None:intergenic | 35.0% | |
ATCATCAGCTTACAATTCAC+AGG | + | tig0019900:45758-45777 | Msa1377320:intron | 35.0% | |
TACAAACCATATCTATGTGC+AGG | - | tig0019900:45799-45818 | None:intergenic | 35.0% | |
! | AAAGAATCTAGATCTGGAGT+TGG | - | tig0019900:45856-45875 | None:intergenic | 35.0% |
! | GCATGGTGTCAGTATTAATT+TGG | + | tig0019900:45975-45994 | Msa1377320:intron | 35.0% |
!! | TCTTTTATAGCAAAGCATCC+TGG | + | tig0019900:46241-46260 | Msa1377320:intron | 35.0% |
GCAAATCTTGCTTCAATGTT+AGG | - | tig0019900:46399-46418 | None:intergenic | 35.0% | |
TTAAACCTCAATTCCCATGT+AGG | - | tig0019900:46430-46449 | None:intergenic | 35.0% | |
TTAATCCAGACACTGGAATT+TGG | + | tig0019900:46446-46465 | Msa1377320:CDS | 35.0% | |
AATTGATGAAGGTTGGCAAT+GGG | + | tig0019900:46547-46566 | Msa1377320:three_prime_UTR | 35.0% | |
AACATAGCTTCAGCAACAAC+AGG | - | tig0019900:28623-28642 | None:intergenic | 40.0% | |
! | CTGAAGCTATGTTTTCGAAC+CGG | + | tig0019900:28630-28649 | Msa1377320:CDS | 40.0% |
! | TGAAGCTATGTTTTCGAACC+GGG | + | tig0019900:28631-28650 | Msa1377320:CDS | 40.0% |
TCTCTGTATATTGGATGCAC+AGG | - | tig0019900:28665-28684 | None:intergenic | 40.0% | |
CTCACTGGATCTCTGTATAT+TGG | - | tig0019900:28674-28693 | None:intergenic | 40.0% | |
GACATTGATAAAAGCCCGTT+TGG | + | tig0019900:28783-28802 | Msa1377320:intron | 40.0% | |
AAGCTCAATCCATACAGGAA+CGG | + | tig0019900:28981-29000 | Msa1377320:intron | 40.0% | |
! | ATTTAGGGCCCATTTGGATA+AGG | - | tig0019900:29208-29227 | None:intergenic | 40.0% |
GTTCTCCCAAACAGTTTCAT+AGG | - | tig0019900:29350-29369 | None:intergenic | 40.0% | |
ACAACACATATAGTGTGAGC+GGG | - | tig0019900:29553-29572 | None:intergenic | 40.0% | |
CACAACACATATAGTGTGAG+CGG | - | tig0019900:29554-29573 | None:intergenic | 40.0% | |
!! | TGGTAATGATAGTGGTGAGA+AGG | + | tig0019900:29833-29852 | Msa1377320:CDS | 40.0% |
TCCCTTTGTTAGAATGAGTC+GGG | + | tig0019900:30066-30085 | Msa1377320:intron | 40.0% | |
TCCCGACTCATTCTAACAAA+GGG | - | tig0019900:30070-30089 | None:intergenic | 40.0% | |
! | TCTCTGACACTTTTATACGG+AGG | - | tig0019900:30111-30130 | None:intergenic | 40.0% |
ATCCAAACGAGCAATAGTAC+CGG | - | tig0019900:30409-30428 | None:intergenic | 40.0% | |
GTACTATTGCTCGTTTGGAT+AGG | + | tig0019900:30409-30428 | Msa1377320:CDS | 40.0% | |
!! | ATTTTGGGGAGGAAATTGCA+AGG | + | tig0019900:31138-31157 | Msa1377320:intron | 40.0% |
!! | TTTTGGGGAGGAAATTGCAA+GGG | + | tig0019900:31139-31158 | Msa1377320:intron | 40.0% |
AAATGCCAGGCTAAGAAAAC+TGG | + | tig0019900:31357-31376 | Msa1377320:intron | 40.0% | |
!! | GCTAAGAAAACTGGCTTTCA+GGG | + | tig0019900:31366-31385 | Msa1377320:intron | 40.0% |
!! | AGCAAATGTCAGTACCGATA+TGG | - | tig0019900:31498-31517 | None:intergenic | 40.0% |
!! | GGTACTGACATTTGCTTTAC+AGG | + | tig0019900:31502-31521 | Msa1377320:CDS | 40.0% |
ACCTTGCCAATCTATAACTG+GGG | - | tig0019900:31561-31580 | None:intergenic | 40.0% | |
CTACCTTGCCAATCTATAAC+TGG | - | tig0019900:31563-31582 | None:intergenic | 40.0% | |
CAGTTATAGATTGGCAAGGT+AGG | + | tig0019900:31561-31580 | Msa1377320:CDS | 40.0% | |
GGGCAAAATATTAAGCGCAT+CGG | + | tig0019900:31604-31623 | Msa1377320:CDS | 40.0% | |
!! | TTTAGGTTGTCAGGGCATTA+AGG | + | tig0019900:31730-31749 | Msa1377320:intron | 40.0% |
!! | GGCAGCATTGATTTAGCTTT+AGG | + | tig0019900:32079-32098 | Msa1377320:intron | 40.0% |
GATTAGAGAGAAATCGTCCA+GGG | - | tig0019900:32211-32230 | None:intergenic | 40.0% | |
GCGTCTATAATATACCGACA+AGG | - | tig0019900:32563-32582 | None:intergenic | 40.0% | |
AGAAAACGGGAAAAAACGTG+AGG | - | tig0019900:32661-32680 | None:intergenic | 40.0% | |
TGTGGATGAGATGATTGTAG+GGG | + | tig0019900:32703-32722 | Msa1377320:intron | 40.0% | |
! | CAGGCAACTTTTCTCCATAA+AGG | + | tig0019900:32952-32971 | Msa1377320:intron | 40.0% |
GAGTCTCATCAAACCCTTTA+TGG | - | tig0019900:32969-32988 | None:intergenic | 40.0% | |
GAGTAAATAATGCAGGGTGA+GGG | - | tig0019900:33087-33106 | None:intergenic | 40.0% | |
! | AGCCTATGAACATTTGGAAC+CGG | + | tig0019900:33281-33300 | Msa1377320:CDS | 40.0% |
GATGTACTTGTTCGTGTCAA+TGG | + | tig0019900:33306-33325 | Msa1377320:CDS | 40.0% | |
! | ATTGTGGTGATGAGAAGGTA+AGG | + | tig0019900:33921-33940 | Msa1377320:intron | 40.0% |
!! | GAAGGTAAGGTGTTGTTGTT+TGG | + | tig0019900:33934-33953 | Msa1377320:intron | 40.0% |
!! | TTGTTGTTTGGGATTTCAGC+AGG | + | tig0019900:33946-33965 | Msa1377320:intron | 40.0% |
!! | TGGTTTACGTTGGTTTGTAG+GGG | + | tig0019900:34075-34094 | Msa1377320:intron | 40.0% |
!! | GCTTGGTTATGGTGTTGATT+TGG | + | tig0019900:34102-34121 | Msa1377320:intron | 40.0% |
! | ACGGTGTATGCATTTCCTTT+TGG | + | tig0019900:34161-34180 | Msa1377320:intron | 40.0% |
! | CGGTGTATGCATTTCCTTTT+GGG | + | tig0019900:34162-34181 | Msa1377320:intron | 40.0% |
! | CATCATGGTCCTTGTTCTTT+TGG | + | tig0019900:34509-34528 | Msa1377320:intron | 40.0% |
! | CATCTGAGACCAAAAGAACA+AGG | - | tig0019900:34521-34540 | None:intergenic | 40.0% |
GAATTGCAAATTGAAAGGGG+TGG | + | tig0019900:34622-34641 | Msa1377320:CDS | 40.0% | |
ATCAAAGAGCTTAACGCTGT+TGG | + | tig0019900:34648-34667 | Msa1377320:CDS | 40.0% | |
!! | TTGGTGAGAGTTTTATGGCT+TGG | + | tig0019900:34667-34686 | Msa1377320:intron | 40.0% |
!! | GTAGAATCATTGATTCACCG+TGG | - | tig0019900:34770-34789 | None:intergenic | 40.0% |
! | ATTCTACTCTTTCTGAAGGG+AGG | + | tig0019900:34783-34802 | Msa1377320:intron | 40.0% |
! | TTCTACTCTTTCTGAAGGGA+GGG | + | tig0019900:34784-34803 | Msa1377320:intron | 40.0% |
! | GGCCTTATCTCATCAAATGT+AGG | - | tig0019900:35075-35094 | None:intergenic | 40.0% |
!! | AACTTACAAAACCGGCTTGT+AGG | - | tig0019900:35131-35150 | None:intergenic | 40.0% |
GTCTCACATTGGATGAGATA+AGG | + | tig0019900:35304-35323 | Msa1377320:intron | 40.0% | |
CAAAACCGGATTGTAAGATG+AGG | - | tig0019900:35360-35379 | None:intergenic | 40.0% | |
!! | CGGTTTTGTAAGGTTGAGTT+AGG | + | tig0019900:35372-35391 | Msa1377320:intron | 40.0% |
TAATTACATGGGATCAGGAG+GGG | - | tig0019900:35542-35561 | None:intergenic | 40.0% | |
TAACACATAAGATCGCAACC+GGG | - | tig0019900:35585-35604 | None:intergenic | 40.0% | |
GTAACACATAAGATCGCAAC+CGG | - | tig0019900:35586-35605 | None:intergenic | 40.0% | |
TCTTACTTAAGATCCGGAGA+GGG | - | tig0019900:35620-35639 | None:intergenic | 40.0% | |
ATCTTACTTAAGATCCGGAG+AGG | - | tig0019900:35621-35640 | None:intergenic | 40.0% | |
!! | ATTGTCTGTAAGCGCTGAAA+TGG | + | tig0019900:35682-35701 | Msa1377320:intron | 40.0% |
TGACGTGATCAAACATCACA+TGG | + | tig0019900:35791-35810 | Msa1377320:intron | 40.0% | |
! | ATGGAGTACTCAACTCAAAC+AGG | + | tig0019900:35818-35837 | Msa1377320:intron | 40.0% |
! | TTTTCATTGGTGCACAGTGA+GGG | - | tig0019900:35860-35879 | None:intergenic | 40.0% |
! | TTTTTCATTGGTGCACAGTG+AGG | - | tig0019900:35861-35880 | None:intergenic | 40.0% |
TCACTGTGCACCAATGAAAA+AGG | + | tig0019900:35860-35879 | Msa1377320:intron | 40.0% | |
CACTGTGCACCAATGAAAAA+GGG | + | tig0019900:35861-35880 | Msa1377320:intron | 40.0% | |
GAGAATCAACATTGCACTGT+AGG | + | tig0019900:35896-35915 | Msa1377320:intron | 40.0% | |
CTCTCTCTTCAACAACTAAC+GGG | - | tig0019900:36224-36243 | None:intergenic | 40.0% | |
!!! | TTTTTTCCTTCCTCCAATGG+GGG | + | tig0019900:36266-36285 | Msa1377320:intron | 40.0% |
ATCCTATTAAGAACCCCCAT+TGG | - | tig0019900:36282-36301 | None:intergenic | 40.0% | |
AATGGGGGTTCTTAATAGGA+TGG | + | tig0019900:36281-36300 | Msa1377320:intron | 40.0% | |
GGGGAGTCCTTTATCTAATA+GGG | - | tig0019900:36310-36329 | None:intergenic | 40.0% | |
TGGGGAGTCCTTTATCTAAT+AGG | - | tig0019900:36311-36330 | None:intergenic | 40.0% | |
TTAGATAAAGGACTCCCCAT+TGG | + | tig0019900:36312-36331 | Msa1377320:intron | 40.0% | |
CTAACCTGCTGATATGAAAG+AGG | - | tig0019900:36466-36485 | None:intergenic | 40.0% | |
! | TGCTTTTGCCTGCAATTAAG+AGG | + | tig0019900:36559-36578 | Msa1377320:intron | 40.0% |
AATTAAGAGGCCAAAGGAGA+TGG | + | tig0019900:36572-36591 | Msa1377320:intron | 40.0% | |
ATATTGGTGCATCTGTCACT+AGG | + | tig0019900:36686-36705 | Msa1377320:intron | 40.0% | |
AGAAACTTCCGATTCCATTG+TGG | + | tig0019900:36904-36923 | Msa1377320:CDS | 40.0% | |
AAACAAGGCCACAATGGAAT+CGG | - | tig0019900:36915-36934 | None:intergenic | 40.0% | |
TTGTTTATGTGGCAGAACCA+GGG | + | tig0019900:36929-36948 | Msa1377320:CDS | 40.0% | |
ATCACTTACGTCATGCACAA+GGG | + | tig0019900:37209-37228 | Msa1377320:intron | 40.0% | |
TGAAGAAATATCTTGCCTCG+AGG | + | tig0019900:37383-37402 | Msa1377320:CDS | 40.0% | |
CAGTTCTGTCTAAGCTATCA+AGG | + | tig0019900:37415-37434 | Msa1377320:CDS | 40.0% | |
GTTCTGTCTAAGCTATCAAG+GGG | + | tig0019900:37417-37436 | Msa1377320:CDS | 40.0% | |
GCGTAGCTTATATACTCCAA+TGG | - | tig0019900:37453-37472 | None:intergenic | 40.0% | |
TCTAACAAACCCTCATTGGT+TGG | + | tig0019900:37637-37656 | Msa1377320:intron | 40.0% | |
TCACACATTCCAACCAATGA+GGG | - | tig0019900:37649-37668 | None:intergenic | 40.0% | |
TAGCCCCAGATGATAGAAAA+AGG | - | tig0019900:38313-38332 | None:intergenic | 40.0% | |
CGTTCACCAGTCAATGAAAT+TGG | - | tig0019900:38362-38381 | None:intergenic | 40.0% | |
!! | ACTCACCATAATGGATCTGA+TGG | + | tig0019900:38479-38498 | Msa1377320:CDS | 40.0% |
!! | CTCACCATAATGGATCTGAT+GGG | + | tig0019900:38480-38499 | Msa1377320:CDS | 40.0% |
CTATCCCATCAGATCCATTA+TGG | - | tig0019900:38487-38506 | None:intergenic | 40.0% | |
!! | GATGGGTTAATGGACTTTCA+AGG | + | tig0019900:38614-38633 | Msa1377320:CDS | 40.0% |
GCATAAATATTACTGCAGCC+AGG | + | tig0019900:38752-38771 | Msa1377320:intron | 40.0% | |
TCATGACCAAAGAGCAATTG+AGG | + | tig0019900:38892-38911 | Msa1377320:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | tig0019900:39018-39037 | None:intergenic | 40.0% | |
GACATTTGTCCGTGTAAAAC+AGG | - | tig0019900:39050-39069 | None:intergenic | 40.0% | |
GTGTCTATGTTCATTCCTCT+TGG | + | tig0019900:39209-39228 | Msa1377320:intron | 40.0% | |
ACAAGTGGAAAATTGCCAAG+AGG | - | tig0019900:39227-39246 | None:intergenic | 40.0% | |
!! | TGGCAATAGTACTGACTTAC+TGG | + | tig0019900:39319-39338 | Msa1377320:intron | 40.0% |
TGGGAGTAATTTAGCACCAT+GGG | - | tig0019900:39349-39368 | None:intergenic | 40.0% | |
ATGGGAGTAATTTAGCACCA+TGG | - | tig0019900:39350-39369 | None:intergenic | 40.0% | |
GCTAAATTACTCCCATCTTC+AGG | + | tig0019900:39354-39373 | Msa1377320:intron | 40.0% | |
AGGAACATGAACCTGAAGAT+GGG | - | tig0019900:39368-39387 | None:intergenic | 40.0% | |
ACACAATCAAGCATACAGGA+TGG | - | tig0019900:39391-39410 | None:intergenic | 40.0% | |
TCACAGTCCTTTATTGGAAC+TGG | + | tig0019900:39415-39434 | Msa1377320:CDS | 40.0% | |
AAAAGATAGCAACACGTCAG+AGG | - | tig0019900:39509-39528 | None:intergenic | 40.0% | |
TCCTGGAGAGGTAAATCATT+AGG | + | tig0019900:39549-39568 | Msa1377320:intron | 40.0% | |
CCTGGAGAGGTAAATCATTA+GGG | + | tig0019900:39550-39569 | Msa1377320:intron | 40.0% | |
ATTAGGGTGTGTTTGCAAGT+TGG | + | tig0019900:39566-39585 | Msa1377320:intron | 40.0% | |
!! | GTTTGCAAGTTGGATTTTGG+AGG | + | tig0019900:39576-39595 | Msa1377320:intron | 40.0% |
!! | GATTTTGGAGGGAAAGACTT+TGG | + | tig0019900:39588-39607 | Msa1377320:intron | 40.0% |
GAGCATAATTGTGAACAGGA+TGG | - | tig0019900:39878-39897 | None:intergenic | 40.0% | |
AAAAGCTAACTTCTACCACC+TGG | + | tig0019900:40104-40123 | Msa1377320:intron | 40.0% | |
AAAGCTAACTTCTACCACCT+GGG | + | tig0019900:40105-40124 | Msa1377320:intron | 40.0% | |
! | TTTCTTTTCACTGTAGTCCC+AGG | - | tig0019900:40125-40144 | None:intergenic | 40.0% |
!! | AAATCAGACTTTGGAGCAAG+AGG | - | tig0019900:40178-40197 | None:intergenic | 40.0% |
TGAGGGTAGCATGATAAAGA+TGG | + | tig0019900:40238-40257 | Msa1377320:intron | 40.0% | |
TTGATGGGGGAACTTTATGA+AGG | + | tig0019900:40367-40386 | Msa1377320:intron | 40.0% | |
ATTTCCTAGAAGTTGCTCGA+AGG | - | tig0019900:40590-40609 | None:intergenic | 40.0% | |
TGCTAACAGATGAACAAGGA+AGG | + | tig0019900:40812-40831 | Msa1377320:CDS | 40.0% | |
GCTAACAGATGAACAAGGAA+GGG | + | tig0019900:40813-40832 | Msa1377320:CDS | 40.0% | |
ATAACTGGTAAGAACCTGAG+TGG | - | tig0019900:40863-40882 | None:intergenic | 40.0% | |
TATTCTCTTGCTTGCTTACC+AGG | + | tig0019900:40880-40899 | Msa1377320:intron | 40.0% | |
ATTCTCTTGCTTGCTTACCA+GGG | + | tig0019900:40881-40900 | Msa1377320:intron | 40.0% | |
GCACATCTCATCTTACTATC+CGG | + | tig0019900:41074-41093 | Msa1377320:intron | 40.0% | |
GCACTATTGGGATTAATGTG+TGG | - | tig0019900:41182-41201 | None:intergenic | 40.0% | |
CACATTAATCCCAATAGTGC+TGG | + | tig0019900:41182-41201 | Msa1377320:intron | 40.0% | |
!!! | TCAGCAATTTTGGGACGAAA+GGG | - | tig0019900:41287-41306 | None:intergenic | 40.0% |
!! | GATTTTGACCCCCTAACATA+AGG | - | tig0019900:41386-41405 | None:intergenic | 40.0% |
!! | AAATTGGCTTGTAAGGTGAG+GGG | - | tig0019900:41551-41570 | None:intergenic | 40.0% |
!! | CAAAATTGGCTTGTAAGGTG+AGG | - | tig0019900:41553-41572 | None:intergenic | 40.0% |
! | CTTGGTTGTTGTTGTTGTTG+TGG | - | tig0019900:41592-41611 | None:intergenic | 40.0% |
AAACTTAGTGGGATAAGGCT+TGG | - | tig0019900:41610-41629 | None:intergenic | 40.0% | |
! | AAGCCTTATCCCACTAAGTT+TGG | + | tig0019900:41609-41628 | Msa1377320:intron | 40.0% |
CTACCAAACTTAGTGGGATA+AGG | - | tig0019900:41615-41634 | None:intergenic | 40.0% | |
CTTATCCCACTAAGTTTGGT+AGG | + | tig0019900:41613-41632 | Msa1377320:intron | 40.0% | |
!! | GGCTTTGTTTGTAAGTTTGG+AGG | + | tig0019900:41853-41872 | Msa1377320:intron | 40.0% |
TGTTTGTAAGTTTGGAGGAG+AGG | + | tig0019900:41858-41877 | Msa1377320:intron | 40.0% | |
GTTTGTAAGTTTGGAGGAGA+GGG | + | tig0019900:41859-41878 | Msa1377320:intron | 40.0% | |
TTTGTAAGTTTGGAGGAGAG+GGG | + | tig0019900:41860-41879 | Msa1377320:intron | 40.0% | |
ATATTGAGAGGGGAAGACTT+TGG | + | tig0019900:41934-41953 | Msa1377320:intron | 40.0% | |
TATTGAGAGGGGAAGACTTT+GGG | + | tig0019900:41935-41954 | Msa1377320:intron | 40.0% | |
! | AATGTATTGGAGGAGGGTTT+TGG | + | tig0019900:42009-42028 | Msa1377320:intron | 40.0% |
!! | TAAGGCTTTGTTTGGGAGTT+TGG | - | tig0019900:42208-42227 | None:intergenic | 40.0% |
TAACTATTCACCAGCTTGAG+GGG | - | tig0019900:42431-42450 | None:intergenic | 40.0% | |
ATTAAGGAGAAGCTCGATAG+TGG | - | tig0019900:42557-42576 | None:intergenic | 40.0% | |
TGATCGAACTAAGCATATCG+AGG | - | tig0019900:42594-42613 | None:intergenic | 40.0% | |
ATCAACTCATCAGTTCGTGA+GGG | + | tig0019900:42793-42812 | Msa1377320:CDS | 40.0% | |
TCCGATTTATTCGATAAGCC+AGG | + | tig0019900:42820-42839 | Msa1377320:CDS | 40.0% | |
AAGATCATATCCGGTGCAAA+TGG | + | tig0019900:42851-42870 | Msa1377320:CDS | 40.0% | |
AGATCATATCCGGTGCAAAT+GGG | + | tig0019900:42852-42871 | Msa1377320:CDS | 40.0% | |
! | CGAGCCTTTGAAAGTAATGT+TGG | - | tig0019900:42947-42966 | None:intergenic | 40.0% |
CTTTCAAAGGCTCGTAGTTT+CGG | + | tig0019900:42953-42972 | Msa1377320:CDS | 40.0% | |
GTTTCGGACTAAGTGATGTT+TGG | + | tig0019900:42969-42988 | Msa1377320:CDS | 40.0% | |
GTGATGTTTGGATTCAGGTA+TGG | + | tig0019900:42981-43000 | Msa1377320:intron | 40.0% | |
! | CTATTTTACTAGCGGAAAGG+CGG | + | tig0019900:43113-43132 | Msa1377320:intron | 40.0% |
! | TATTTTACTAGCGGAAAGGC+GGG | + | tig0019900:43114-43133 | Msa1377320:intron | 40.0% |
AATCAGAAAGATGGACACGT+CGG | - | tig0019900:43142-43161 | None:intergenic | 40.0% | |
ATATATTCTCCAGCTTGAGG+GGG | - | tig0019900:43610-43629 | None:intergenic | 40.0% | |
GTAATCAACGTCTACGTGTT+TGG | + | tig0019900:43771-43790 | Msa1377320:intron | 40.0% | |
! | TGATGGACAACAAAAGCAAC+AGG | - | tig0019900:44055-44074 | None:intergenic | 40.0% |
CGTAAAACCTGTCGTCTTAT+TGG | - | tig0019900:44262-44281 | None:intergenic | 40.0% | |
! | CGACAGGTTTTACGTGTTAA+AGG | + | tig0019900:44268-44287 | Msa1377320:CDS | 40.0% |
!!! | GCTGAAAATCTTTTGGAGCA+AGG | + | tig0019900:44310-44329 | Msa1377320:CDS | 40.0% |
! | ATATCAAGGAAGCATGTGAC+TGG | - | tig0019900:44364-44383 | None:intergenic | 40.0% |
!! | TCAGATGACTATTTTTCGGC+AGG | + | tig0019900:44435-44454 | Msa1377320:CDS | 40.0% |
! | TGATTTGTGTGCTTGTGTCT+AGG | + | tig0019900:44559-44578 | Msa1377320:intron | 40.0% |
GATTTGTGTGCTTGTGTCTA+GGG | + | tig0019900:44560-44579 | Msa1377320:intron | 40.0% | |
GCACAACTCGTACAGTTAAT+TGG | + | tig0019900:44630-44649 | Msa1377320:CDS | 40.0% | |
ACTCGTACAGTTAATTGGTG+TGG | + | tig0019900:44635-44654 | Msa1377320:CDS | 40.0% | |
! | GTTATGGTGTATTTGGGACA+AGG | + | tig0019900:44717-44736 | Msa1377320:CDS | 40.0% |
ACTTAGACTACGAGTCAGAT+TGG | + | tig0019900:44890-44909 | Msa1377320:intron | 40.0% | |
ATCAAGAGTCTACGCAAGAT+CGG | + | tig0019900:45070-45089 | Msa1377320:intron | 40.0% | |
TTAGTGGGATCTTATGATCC+GGG | - | tig0019900:45138-45157 | None:intergenic | 40.0% | |
CTTAGTGGGATCTTATGATC+CGG | - | tig0019900:45139-45158 | None:intergenic | 40.0% | |
GTTAAGCAGGCATATTGATG+TGG | - | tig0019900:45344-45363 | None:intergenic | 40.0% | |
ATGCAAGTGGTATCAAGACT+AGG | - | tig0019900:45382-45401 | None:intergenic | 40.0% | |
ATCAGCTTACAATTCACAGG+TGG | + | tig0019900:45761-45780 | Msa1377320:intron | 40.0% | |
ACAATTCACAGGTGGAGTTA+TGG | + | tig0019900:45769-45788 | Msa1377320:intron | 40.0% | |
CAATTCACAGGTGGAGTTAT+GGG | + | tig0019900:45770-45789 | Msa1377320:intron | 40.0% | |
! | ATGGTTTGTATGCTCTTCAG+TGG | + | tig0019900:45809-45828 | Msa1377320:CDS | 40.0% |
GGTACGATATCTGTTATGCA+TGG | + | tig0019900:45891-45910 | Msa1377320:intron | 40.0% | |
ACAAGTGTGAAGCAAAAACC+AGG | - | tig0019900:46262-46281 | None:intergenic | 40.0% | |
! | TAGAGCATGGAGAGTTTGTT+CGG | + | tig0019900:46338-46357 | Msa1377320:CDS | 40.0% |
TGCTTCAATGTTAGGACTTG+TGG | - | tig0019900:46391-46410 | None:intergenic | 40.0% | |
TGAAGCAAGATTTGCACTAC+TGG | + | tig0019900:46404-46423 | Msa1377320:CDS | 40.0% | |
TTGAGGTTTAATCCAGACAC+TGG | + | tig0019900:46439-46458 | Msa1377320:CDS | 40.0% | |
CACAGTTCTGTATGAATGAG+CGG | + | tig0019900:46496-46515 | Msa1377320:exon | 40.0% | |
CCTTCATCAATTCAAGAGCA+AGG | - | tig0019900:46539-46558 | None:intergenic | 40.0% | |
CCTTGCTCTTGAATTGATGA+AGG | + | tig0019900:46536-46555 | Msa1377320:three_prime_UTR | 40.0% | |
GCTCTTGAATTGATGAAGGT+TGG | + | tig0019900:46540-46559 | Msa1377320:three_prime_UTR | 40.0% | |
GAATTGATGAAGGTTGGCAA+TGG | + | tig0019900:46546-46565 | Msa1377320:three_prime_UTR | 40.0% | |
GCACAAATCATTCGCCTTAG+CGG | - | tig0019900:28299-28318 | None:intergenic | 45.0% | |
! | GTTACAGCGTTTTCCTGAGA+CGG | - | tig0019900:28340-28359 | None:intergenic | 45.0% |
! | GTTTCAGTGTCGAAAAAGCG+AGG | - | tig0019900:28430-28449 | None:intergenic | 45.0% |
GCGTTTATCAACGACGAAAC+CGG | - | tig0019900:28473-28492 | None:intergenic | 45.0% | |
! | TATGTTTTCGAACCGGGAAG+AGG | + | tig0019900:28637-28656 | Msa1377320:CDS | 45.0% |
! | AAGCTCATTTAGGGCCCATT+TGG | - | tig0019900:29214-29233 | None:intergenic | 45.0% |
AATCCAACACAAGCAGCTTC+AGG | - | tig0019900:29798-29817 | None:intergenic | 45.0% | |
GTCCCGACTCATTCTAACAA+AGG | - | tig0019900:30071-30090 | None:intergenic | 45.0% | |
!! | ATCTTGGCTTTACGTCATCC+AGG | + | tig0019900:30371-30390 | Msa1377320:intron | 45.0% |
TCCAGCATCACTGATAGAGT+CGG | - | tig0019900:30877-30896 | None:intergenic | 45.0% | |
GCTTGGAATCAAGCACAATC+AGG | + | tig0019900:31010-31029 | Msa1377320:intron | 45.0% | |
! | GAAAGCCAGTTTTCTTAGCC+TGG | - | tig0019900:31365-31384 | None:intergenic | 45.0% |
!! | GGCTAAGAAAACTGGCTTTC+AGG | + | tig0019900:31365-31384 | Msa1377320:intron | 45.0% |
TTTGCTTTACAGGCAGCATC+TGG | + | tig0019900:31512-31531 | Msa1377320:CDS | 45.0% | |
TTGCTTTACAGGCAGCATCT+GGG | + | tig0019900:31513-31532 | Msa1377320:CDS | 45.0% | |
GTGGTTCCCCAGTTATAGAT+TGG | + | tig0019900:31552-31571 | Msa1377320:CDS | 45.0% | |
TCCCCAGTTATAGATTGGCA+AGG | + | tig0019900:31557-31576 | Msa1377320:CDS | 45.0% | |
! | TATTTTGCCCCCAGCATTCA+GGG | - | tig0019900:31594-31613 | None:intergenic | 45.0% |
! | ATATTTTGCCCCCAGCATTC+AGG | - | tig0019900:31595-31614 | None:intergenic | 45.0% |
! | ATCGGCATTCTTTTTGCCTC+TGG | + | tig0019900:31622-31641 | Msa1377320:CDS | 45.0% |
GGATTAGAGAGAAATCGTCC+AGG | - | tig0019900:32212-32231 | None:intergenic | 45.0% | |
TAAGGTGGACAACTCTAGAC+TGG | - | tig0019900:32275-32294 | None:intergenic | 45.0% | |
! | TTTGATGAGACTCGTCGACT+TGG | + | tig0019900:32976-32995 | Msa1377320:CDS | 45.0% |
GAGCAGGTTGTTCTAGTGTT+TGG | + | tig0019900:33015-33034 | Msa1377320:intron | 45.0% | |
CAGGGTGAGGGAATACTTAA+AGG | - | tig0019900:33075-33094 | None:intergenic | 45.0% | |
GGAGTAAATAATGCAGGGTG+AGG | - | tig0019900:33088-33107 | None:intergenic | 45.0% | |
!! | CTTTGACTTGTTTAGGTGCC+AGG | + | tig0019900:33252-33271 | Msa1377320:intron | 45.0% |
TGGTCCAGCCTATGAACATT+TGG | + | tig0019900:33275-33294 | Msa1377320:CDS | 45.0% | |
GGTTCCAAATGTTCATAGGC+TGG | - | tig0019900:33282-33301 | None:intergenic | 45.0% | |
! | GCCTATGAACATTTGGAACC+GGG | + | tig0019900:33282-33301 | Msa1377320:CDS | 45.0% |
ACCCGGTTCCAAATGTTCAT+AGG | - | tig0019900:33286-33305 | None:intergenic | 45.0% | |
ACACGAACAAGTACATCACC+CGG | - | tig0019900:33303-33322 | None:intergenic | 45.0% | |
!!! | ATGTTTTTTAGGAAGGGGGC+AGG | - | tig0019900:33366-33385 | None:intergenic | 45.0% |
GTGTATGTGGTCATTCACGA+TGG | + | tig0019900:34028-34047 | Msa1377320:intron | 45.0% | |
! | TGGTTTGTAGGGGTTTAGCT+TGG | + | tig0019900:34085-34104 | Msa1377320:intron | 45.0% |
!! | GTAGGGGTTTAGCTTGGTTA+TGG | + | tig0019900:34091-34110 | Msa1377320:intron | 45.0% |
ATATAGGCGGAACACCCAAA+AGG | - | tig0019900:34179-34198 | None:intergenic | 45.0% | |
TTGGGTGTTCCGCCTATATA+CGG | + | tig0019900:34180-34199 | Msa1377320:intron | 45.0% | |
!! | AAGCAAAGAGCGCCGTATAT+AGG | - | tig0019900:34195-34214 | None:intergenic | 45.0% |
GTTCCTGTTCGTCTTGTGTA+GGG | + | tig0019900:34234-34253 | Msa1377320:intron | 45.0% | |
ATGACCTGCAGTAATGTCAG+AGG | - | tig0019900:34547-34566 | None:intergenic | 45.0% | |
CAAGCAAAGTCTCCAGTTTC+AGG | - | tig0019900:34579-34598 | None:intergenic | 45.0% | |
!! | CGCTGTTGGTGAGAGTTTTA+TGG | + | tig0019900:34662-34681 | Msa1377320:intron | 45.0% |
!! | TTTTCTGTGGTAAGGCACCA+CGG | + | tig0019900:34750-34769 | Msa1377320:intron | 45.0% |
! | GCCCAACCCAAATTCTAAGA+TGG | + | tig0019900:35159-35178 | Msa1377320:intron | 45.0% |
TGCTATCAAGTCACCGCTAT+CGG | + | tig0019900:35217-35236 | Msa1377320:intron | 45.0% | |
CCTAGGGAAAAACATCTCGA+GGG | - | tig0019900:35256-35275 | None:intergenic | 45.0% | |
! | ATGTTTTTCCCTAGGCGTGA+GGG | + | tig0019900:35261-35280 | Msa1377320:intron | 45.0% |
GCAGTCCTCATCTTACAATC+CGG | + | tig0019900:35352-35371 | Msa1377320:intron | 45.0% | |
ACAATATTGCTACCCCTCTC+CGG | + | tig0019900:35604-35623 | Msa1377320:intron | 45.0% | |
CTTACTTAAGATCCGGAGAG+GGG | - | tig0019900:35619-35638 | None:intergenic | 45.0% | |
TTTCATTGGTGCACAGTGAG+GGG | - | tig0019900:35859-35878 | None:intergenic | 45.0% | |
ACGGGTCCTGCGATTAATAT+AGG | - | tig0019900:36206-36225 | None:intergenic | 45.0% | |
CTATTAAGAACCCCCATTGG+AGG | - | tig0019900:36279-36298 | None:intergenic | 45.0% | |
CTCCAATGGGGGTTCTTAAT+AGG | + | tig0019900:36277-36296 | Msa1377320:intron | 45.0% | |
TTACTGCTCCACTAACTTCC+AGG | - | tig0019900:36438-36457 | None:intergenic | 45.0% | |
CCTGCTGATATGAAAGAGGT+TGG | - | tig0019900:36462-36481 | None:intergenic | 45.0% | |
CCAACCTCTTTCATATCAGC+AGG | + | tig0019900:36459-36478 | Msa1377320:CDS | 45.0% | |
TCCTTTGGCCTCTTAATTGC+AGG | - | tig0019900:36570-36589 | None:intergenic | 45.0% | |
CCACATAAACAAGGCCACAA+TGG | - | tig0019900:36921-36940 | None:intergenic | 45.0% | |
!! | CCATTGTGGCCTTGTTTATG+TGG | + | tig0019900:36918-36937 | Msa1377320:CDS | 45.0% |
!! | CTGGTTCTGCCACATAAACA+AGG | - | tig0019900:36930-36949 | None:intergenic | 45.0% |
CTTGTTTATGTGGCAGAACC+AGG | + | tig0019900:36928-36947 | Msa1377320:CDS | 45.0% | |
CATCACTTACGTCATGCACA+AGG | + | tig0019900:37208-37227 | Msa1377320:intron | 45.0% | |
!! | TCTCTAAAGCAGGAGTTCCT+CGG | + | tig0019900:37334-37353 | Msa1377320:CDS | 45.0% |
GAACTGATGTTAGATCCTCG+AGG | - | tig0019900:37401-37420 | None:intergenic | 45.0% | |
ATCGTCATCGAAGGAAGGTA+AGG | + | tig0019900:37475-37494 | Msa1377320:intron | 45.0% | |
CTCACACATTCCAACCAATG+AGG | - | tig0019900:37650-37669 | None:intergenic | 45.0% | |
TGACAGTTGATCGCCATGAA+TGG | + | tig0019900:38210-38229 | Msa1377320:CDS | 45.0% | |
TCATCCCGAGTGTATATCTG+GGG | - | tig0019900:38245-38264 | None:intergenic | 45.0% | |
GTCATCCCGAGTGTATATCT+GGG | - | tig0019900:38246-38265 | None:intergenic | 45.0% | |
TGTCATCCCGAGTGTATATC+TGG | - | tig0019900:38247-38266 | None:intergenic | 45.0% | |
! | TCATCTGGGGCTAAAGATGT+TGG | + | tig0019900:38320-38339 | Msa1377320:CDS | 45.0% |
! | TGTTGGTGAAGGTAACCTTC+AGG | + | tig0019900:38397-38416 | Msa1377320:CDS | 45.0% |
TGAAGGTAACCTTCAGGAGT+TGG | + | tig0019900:38403-38422 | Msa1377320:CDS | 45.0% | |
! | AACCTTCAGGAGTTGGTTGA+TGG | + | tig0019900:38410-38429 | Msa1377320:CDS | 45.0% |
GAGCGTGTAACTCACCATAA+TGG | + | tig0019900:38470-38489 | Msa1377320:CDS | 45.0% | |
! | TCAGGTGCCATACAAGATGA+TGG | + | tig0019900:38596-38615 | Msa1377320:CDS | 45.0% |
! | CAGGTGCCATACAAGATGAT+GGG | + | tig0019900:38597-38616 | Msa1377320:CDS | 45.0% |
TGCTTCCACGACAAATGCAT+CGG | + | tig0019900:38643-38662 | Msa1377320:CDS | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | tig0019900:39019-39038 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | tig0019900:39022-39041 | None:intergenic | 45.0% | |
! | CAGCCTTACCCTGTTTTACA+CGG | + | tig0019900:39038-39057 | Msa1377320:intron | 45.0% |
TGTCCGTGTAAAACAGGGTA+AGG | - | tig0019900:39044-39063 | None:intergenic | 45.0% | |
!!! | CTGACTTACTGGTTTTCCCA+TGG | + | tig0019900:39330-39349 | Msa1377320:intron | 45.0% |
GAGGAACATGAACCTGAAGA+TGG | - | tig0019900:39369-39388 | None:intergenic | 45.0% | |
CAATCAAGCATACAGGATGG+AGG | - | tig0019900:39388-39407 | None:intergenic | 45.0% | |
GCTTTCCCAGTTGAAATTCC+TGG | + | tig0019900:39532-39551 | Msa1377320:intron | 45.0% | |
CCTCTCCAGGAATTTCAACT+GGG | - | tig0019900:39540-39559 | None:intergenic | 45.0% | |
ACCTCTCCAGGAATTTCAAC+TGG | - | tig0019900:39541-39560 | None:intergenic | 45.0% | |
CCCTAATGATTTACCTCTCC+AGG | - | tig0019900:39553-39572 | None:intergenic | 45.0% | |
TTTGGAGGGAAAGACTTTGG+AGG | + | tig0019900:39591-39610 | Msa1377320:intron | 45.0% | |
TTGGAGGGAAAGACTTTGGA+GGG | + | tig0019900:39592-39611 | Msa1377320:intron | 45.0% | |
! | TTAAGGGTGTGATTGCGTGT+TGG | - | tig0019900:39764-39783 | None:intergenic | 45.0% |
GGTGTCTTCTTTCTTGATGC+AGG | + | tig0019900:39842-39861 | Msa1377320:intron | 45.0% | |
GTCTTCTTTCTTGATGCAGG+TGG | + | tig0019900:39845-39864 | Msa1377320:intron | 45.0% | |
TAATTCTGCAGCACGAACCA+GGG | - | tig0019900:39943-39962 | None:intergenic | 45.0% | |
CTGCAGAATTACTTCCAGGT+GGG | + | tig0019900:39952-39971 | Msa1377320:intron | 45.0% | |
TCAAACAGGTCTTACCAGTG+AGG | + | tig0019900:40220-40239 | Msa1377320:intron | 45.0% | |
CAAACAGGTCTTACCAGTGA+GGG | + | tig0019900:40221-40240 | Msa1377320:intron | 45.0% | |
CTTTATCATGCTACCCTCAC+TGG | - | tig0019900:40237-40256 | None:intergenic | 45.0% | |
TTGAAGTAGATGCTGTGGGA+AGG | + | tig0019900:40432-40451 | Msa1377320:intron | 45.0% | |
GAATCTCCTCGACATAATGC+CGG | - | tig0019900:40540-40559 | None:intergenic | 45.0% | |
GGCTTCTACTTAAGCCCAAA+AGG | - | tig0019900:40569-40588 | None:intergenic | 45.0% | |
TATTGGTCGCTCTGTAACGT+GGG | - | tig0019900:40662-40681 | None:intergenic | 45.0% | |
ATATTGGTCGCTCTGTAACG+TGG | - | tig0019900:40663-40682 | None:intergenic | 45.0% | |
ACGTTACAGAGCGACCAATA+TGG | + | tig0019900:40662-40681 | Msa1377320:CDS | 45.0% | |
GGTGTGCTAACAGATGAACA+AGG | + | tig0019900:40808-40827 | Msa1377320:CDS | 45.0% | |
AGAAGCTTCCCCATAAAGCT+CGG | - | tig0019900:40840-40859 | None:intergenic | 45.0% | |
! | GTGTGGATATAAATGGTGGG+TGG | - | tig0019900:41165-41184 | None:intergenic | 45.0% |
!!! | CAGCAATTTTGGGACGAAAG+GGG | - | tig0019900:41286-41305 | None:intergenic | 45.0% |
!!! | CTCAGCAATTTTGGGACGAA+AGG | - | tig0019900:41288-41307 | None:intergenic | 45.0% |
! | GGCGTCTTCTCAGCAATTTT+GGG | - | tig0019900:41296-41315 | None:intergenic | 45.0% |
! | TGGCGTCTTCTCAGCAATTT+TGG | - | tig0019900:41297-41316 | None:intergenic | 45.0% |
TGCAGCCTACCAAACTTAGT+GGG | - | tig0019900:41621-41640 | None:intergenic | 45.0% | |
ATGCAGCCTACCAAACTTAG+TGG | - | tig0019900:41622-41641 | None:intergenic | 45.0% | |
ACTAAGTTTGGTAGGCTGCA+TGG | + | tig0019900:41621-41640 | Msa1377320:intron | 45.0% | |
ATTGAGAGGGGAAGACTTTG+GGG | + | tig0019900:41936-41955 | Msa1377320:intron | 45.0% | |
!!! | TATTGGAGGAGGGTTTTGGA+GGG | + | tig0019900:42013-42032 | Msa1377320:intron | 45.0% |
! | AACGGAAGTCTTTGGAAGGT+TGG | - | tig0019900:42175-42194 | None:intergenic | 45.0% |
!! | GCTTTGTTTGGGAGTTTGGA+GGG | - | tig0019900:42204-42223 | None:intergenic | 45.0% |
GCTTGCTTGCGTAAACAAAG+TGG | + | tig0019900:42296-42315 | Msa1377320:intron | 45.0% | |
AACTATTCACCAGCTTGAGG+GGG | - | tig0019900:42430-42449 | None:intergenic | 45.0% | |
GTTATTCTCCATTCCCTGCT+CGG | + | tig0019900:42447-42466 | Msa1377320:intron | 45.0% | |
TTATTCTCCATTCCCTGCTC+GGG | + | tig0019900:42448-42467 | Msa1377320:intron | 45.0% | |
! | GAATGACTTTTACCCGAGCA+GGG | - | tig0019900:42463-42482 | None:intergenic | 45.0% |
! | TGAATGACTTTTACCCGAGC+AGG | - | tig0019900:42464-42483 | None:intergenic | 45.0% |
CTTGCGGACATTCTCACAAA+AGG | - | tig0019900:42505-42524 | None:intergenic | 45.0% | |
GATTCTCTGTGTCCTCACAA+GGG | - | tig0019900:42531-42550 | None:intergenic | 45.0% | |
TGATTCTCTGTGTCCTCACA+AGG | - | tig0019900:42532-42551 | None:intergenic | 45.0% | |
ACCTACTTTCAGCTGGAACA+GGG | - | tig0019900:42765-42784 | None:intergenic | 45.0% | |
TACCTACTTTCAGCTGGAAC+AGG | - | tig0019900:42766-42785 | None:intergenic | 45.0% | |
TACTGCTACCTACTTTCAGC+TGG | - | tig0019900:42772-42791 | None:intergenic | 45.0% | |
CATCAACTCATCAGTTCGTG+AGG | + | tig0019900:42792-42811 | Msa1377320:CDS | 45.0% | |
TCAACTCATCAGTTCGTGAG+GGG | + | tig0019900:42794-42813 | Msa1377320:CDS | 45.0% | |
TTATTCGATAAGCCAGGTCC+TGG | + | tig0019900:42826-42845 | Msa1377320:CDS | 45.0% | |
ATATGATCTTGTCCAGGACC+TGG | - | tig0019900:42841-42860 | None:intergenic | 45.0% | |
GTCCTGGACAAGATCATATC+CGG | + | tig0019900:42842-42861 | Msa1377320:CDS | 45.0% | |
GGGTCACCTCTTCTCATAAA+TGG | + | tig0019900:42872-42891 | Msa1377320:CDS | 45.0% | |
ATCATTTGAGCTCACCGAAG+AGG | + | tig0019900:43708-43727 | Msa1377320:intron | 45.0% | |
GTCCTCTCGTTGTTAAAGCA+GGG | + | tig0019900:43793-43812 | Msa1377320:intron | 45.0% | |
TCCTCTCGTTGTTAAAGCAG+GGG | + | tig0019900:43794-43813 | Msa1377320:intron | 45.0% | |
GAAAGACCCAATAAGACGAC+AGG | + | tig0019900:44252-44271 | Msa1377320:CDS | 45.0% | |
CGTGTTAAAGGTTGTTTGGC+TGG | + | tig0019900:44280-44299 | Msa1377320:CDS | 45.0% | |
AGGTTGTTTGGCTGGATCAA+AGG | + | tig0019900:44288-44307 | Msa1377320:CDS | 45.0% | |
ACGAGAGGTTGAACTTCTTG+TGG | + | tig0019900:44583-44602 | Msa1377320:CDS | 45.0% | |
CGAGAGGTTGAACTTCTTGT+GGG | + | tig0019900:44584-44603 | Msa1377320:CDS | 45.0% | |
TTCTTGTGGGAGCAGATGTA+AGG | + | tig0019900:44597-44616 | Msa1377320:CDS | 45.0% | |
TCTTGTGGGAGCAGATGTAA+GGG | + | tig0019900:44598-44617 | Msa1377320:CDS | 45.0% | |
GCAGATGTAAGGGATGGAAA+TGG | + | tig0019900:44608-44627 | Msa1377320:CDS | 45.0% | |
CAGTAGGGAAATCAGCTTCA+AGG | + | tig0019900:45032-45051 | Msa1377320:intron | 45.0% | |
TCAAGAGTCTACGCAAGATC+GGG | + | tig0019900:45071-45090 | Msa1377320:intron | 45.0% | |
TCATGTCTCTACTGCATGTG+AGG | + | tig0019900:45250-45269 | Msa1377320:intron | 45.0% | |
CATGTCTCTACTGCATGTGA+GGG | + | tig0019900:45251-45270 | Msa1377320:intron | 45.0% | |
ATGTCTCTACTGCATGTGAG+GGG | + | tig0019900:45252-45271 | Msa1377320:intron | 45.0% | |
GGCTCATTGTTCTTTGGTCT+TGG | + | tig0019900:45273-45292 | Msa1377320:intron | 45.0% | |
AAGCAGGCATATTGATGTGG+AGG | - | tig0019900:45341-45360 | None:intergenic | 45.0% | |
ACAATTGTGCAGATTGGGAG+TGG | + | tig0019900:45419-45438 | Msa1377320:intron | 45.0% | |
! | GCAGATTGGGAGTGGATTTA+TGG | + | tig0019900:45427-45446 | Msa1377320:intron | 45.0% |
AGTCAAGGATGCCAGGAATA+TGG | - | tig0019900:45519-45538 | None:intergenic | 45.0% | |
!!! | CTTTTTGAGTCAAGGATGCC+AGG | - | tig0019900:45526-45545 | None:intergenic | 45.0% |
TGCTATCAGGAACTAGAGCA+TGG | + | tig0019900:46325-46344 | Msa1377320:intron | 45.0% | |
! | AGAGCATGGAGAGTTTGTTC+GGG | + | tig0019900:46339-46358 | Msa1377320:CDS | 45.0% |
! | ATGGAGAGTTTGTTCGGGTA+AGG | + | tig0019900:46344-46363 | Msa1377320:CDS | 45.0% |
GTAAGGACAATTCACCTCGA+TGG | + | tig0019900:46361-46380 | Msa1377320:CDS | 45.0% | |
! | ATTTGCACTACTGGCCTACA+TGG | + | tig0019900:46413-46432 | Msa1377320:CDS | 45.0% |
! | TTTGCACTACTGGCCTACAT+GGG | + | tig0019900:46414-46433 | Msa1377320:CDS | 45.0% |
CGCTCATTCATACAGAACTG+TGG | - | tig0019900:46498-46517 | None:intergenic | 45.0% | |
GTATGAATGAGCGGACAGTA+AGG | + | tig0019900:46505-46524 | Msa1377320:exon | 45.0% | |
! | AAGGTTGGCAATGGGTTCTT+TGG | + | tig0019900:46555-46574 | Msa1377320:three_prime_UTR | 45.0% |
!! | AAAATAAAAAATAAAAAAAC+AGG | - | tig0019900:30302-30321 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAAAAAAAAAG+AGG | - | tig0019900:30725-30744 | None:intergenic | 5.0% |
!! | AATTAAAATAAAAAACATTA+AGG | - | tig0019900:30813-30832 | None:intergenic | 5.0% |
!!! | TATTTTAGTAATAAAAAAAT+GGG | - | tig0019900:30903-30922 | None:intergenic | 5.0% |
!!! | TTATTTTAGTAATAAAAAAA+TGG | - | tig0019900:30904-30923 | None:intergenic | 5.0% |
!!! | GTATTATTTTAAATTTTAAT+AGG | + | tig0019900:35483-35502 | Msa1377320:intron | 5.0% |
!!! | TTAGAAAAATATATTTTTAA+AGG | - | tig0019900:38826-38845 | None:intergenic | 5.0% |
!! | AAGTATAAATATTATTATTT+AGG | - | tig0019900:40071-40090 | None:intergenic | 5.0% |
!! | TTATAAATATAAATATAAGT+AGG | - | tig0019900:45170-45189 | None:intergenic | 5.0% |
!! | TATTTATATTTATAAATACA+TGG | + | tig0019900:45175-45194 | Msa1377320:intron | 5.0% |
!!! | ATTATTTTTATTTTGAATTA+CGG | + | tig0019900:45587-45606 | Msa1377320:intron | 5.0% |
CAATGGGAGGTTTAACGGAG+AGG | + | tig0019900:28254-28273 | Msa1377320:exon | 50.0% | |
AAGACACTTCCGCCAGTCAT+CGG | - | tig0019900:28365-28384 | None:intergenic | 50.0% | |
AAAAGCGAGGACCGGTGATT+CGG | - | tig0019900:28417-28436 | None:intergenic | 50.0% | |
! | AGTGTCGAAAAAGCGAGGAC+CGG | - | tig0019900:28425-28444 | None:intergenic | 50.0% |
! | ACTGATTCTAGCTGCGCTAC+CGG | + | tig0019900:28451-28470 | Msa1377320:CDS | 50.0% |
! | TTCGTCGTTGATAAACGCCG+TGG | + | tig0019900:28475-28494 | Msa1377320:CDS | 50.0% |
AGGCTTAACGACATGGCGAT+TGG | - | tig0019900:28512-28531 | None:intergenic | 50.0% | |
AATCGCCATGTCGTTAAGCC+TGG | + | tig0019900:28511-28530 | Msa1377320:CDS | 50.0% | |
ACTCACCAGGCTTAACGACA+TGG | - | tig0019900:28519-28538 | None:intergenic | 50.0% | |
CCAATGAGACCGTTCCTGTA+TGG | - | tig0019900:28993-29012 | None:intergenic | 50.0% | |
CCATACAGGAACGGTCTCAT+TGG | + | tig0019900:28990-29009 | Msa1377320:intron | 50.0% | |
CGTCATCCAGGTTTCCATCT+TGG | + | tig0019900:30383-30402 | Msa1377320:intron | 50.0% | |
ATCCAGGTTTCCATCTTGGC+CGG | + | tig0019900:30387-30406 | Msa1377320:intron | 50.0% | |
!! | AGCAATAGTACCGGCCAAGA+TGG | - | tig0019900:30400-30419 | None:intergenic | 50.0% |
ACAAACCTGAAGTGTACCCC+GGG | - | tig0019900:31811-31830 | None:intergenic | 50.0% | |
GACAAACCTGAAGTGTACCC+CGG | - | tig0019900:31812-31831 | None:intergenic | 50.0% | |
AGAGAGAAATCGTCCAGGGA+TGG | - | tig0019900:32207-32226 | None:intergenic | 50.0% | |
CATCAGAAGTGAGACAGAGC+AGG | + | tig0019900:32999-33018 | Msa1377320:CDS | 50.0% | |
!! | TGACTTGTTTAGGTGCCAGG+TGG | + | tig0019900:33255-33274 | Msa1377320:intron | 50.0% |
! | TTTGGAGCAACTTGTCGGGA+TGG | + | tig0019900:33850-33869 | Msa1377320:intron | 50.0% |
TTGGAGCAACTTGTCGGGAT+GGG | + | tig0019900:33851-33870 | Msa1377320:intron | 50.0% | |
AGTAGCGTGCGATAGGTGTT+TGG | + | tig0019900:34000-34019 | Msa1377320:intron | 50.0% | |
GTCATTCACGATGGAGTGAG+AGG | + | tig0019900:34037-34056 | Msa1377320:intron | 50.0% | |
!! | CAAAGAGCGCCGTATATAGG+CGG | - | tig0019900:34192-34211 | None:intergenic | 50.0% |
GGTTCCTGTTCGTCTTGTGT+AGG | + | tig0019900:34233-34252 | Msa1377320:intron | 50.0% | |
AGTCCCTACACAAGACGAAC+AGG | - | tig0019900:34240-34259 | None:intergenic | 50.0% | |
GTTCGTCTTGTGTAGGGACT+TGG | + | tig0019900:34240-34259 | Msa1377320:intron | 50.0% | |
GTTGCCTCTGACATTACTGC+AGG | + | tig0019900:34540-34559 | Msa1377320:intron | 50.0% | |
!! | ACAAAACCGGCTTGTAGGTG+AGG | - | tig0019900:35126-35145 | None:intergenic | 50.0% |
GCTCAACGGATCTTGGACAA+GGG | - | tig0019900:35193-35212 | None:intergenic | 50.0% | |
! | CTTGATAGCACGTGGCTCAA+CGG | - | tig0019900:35207-35226 | None:intergenic | 50.0% |
GCTATCAAGTCACCGCTATC+GGG | + | tig0019900:35218-35237 | Msa1377320:intron | 50.0% | |
! | CCCTCGAGATGTTTTTCCCT+AGG | + | tig0019900:35253-35272 | Msa1377320:intron | 50.0% |
GCCTAGGGAAAAACATCTCG+AGG | - | tig0019900:35257-35276 | None:intergenic | 50.0% | |
! | GATGTTTTTCCCTAGGCGTG+AGG | + | tig0019900:35260-35279 | Msa1377320:intron | 50.0% |
! | TGTTTTTCCCTAGGCGTGAG+GGG | + | tig0019900:35262-35281 | Msa1377320:intron | 50.0% |
TGGGTAGGATCTTACGATCC+CGG | + | tig0019900:35564-35583 | Msa1377320:intron | 50.0% | |
!! | CTGTAAGCGCTGAAATGGCT+AGG | + | tig0019900:35687-35706 | Msa1377320:intron | 50.0% |
TAAGAACCCCCATTGGAGGA+AGG | - | tig0019900:36275-36294 | None:intergenic | 50.0% | |
GCCTGCAATTAAGAGGCCAA+AGG | + | tig0019900:36566-36585 | Msa1377320:intron | 50.0% | |
ACTTGTCTGATGGCTGCAGT+CGG | + | tig0019900:38181-38200 | Msa1377320:intron | 50.0% | |
CACCTCCCCAGATATACACT+CGG | + | tig0019900:38237-38256 | Msa1377320:CDS | 50.0% | |
ACCTCCCCAGATATACACTC+GGG | + | tig0019900:38238-38257 | Msa1377320:CDS | 50.0% | |
TACACTCGGGATGACAGTAC+TGG | + | tig0019900:38251-38270 | Msa1377320:CDS | 50.0% | |
AAGCAGGCTTAGCAATCCAC+AGG | - | tig0019900:38277-38296 | None:intergenic | 50.0% | |
TTGACTGGTGAACGTGCTTG+TGG | + | tig0019900:38368-38387 | Msa1377320:CDS | 50.0% | |
TGACTGGTGAACGTGCTTGT+GGG | + | tig0019900:38369-38388 | Msa1377320:CDS | 50.0% | |
CACCATCAACCAACTCCTGA+AGG | - | tig0019900:38415-38434 | None:intergenic | 50.0% | |
TGGTGAGTTACACGCTCTGA+AGG | - | tig0019900:38467-38486 | None:intergenic | 50.0% | |
GCTTCCACGACAAATGCATC+GGG | + | tig0019900:38644-38663 | Msa1377320:CDS | 50.0% | |
AATATTACTGCAGCCAGGGC+CGG | + | tig0019900:38757-38776 | Msa1377320:intron | 50.0% | |
!! | GGTCTCTTAATCTCTAGGGC+CGG | - | tig0019900:38779-38798 | None:intergenic | 50.0% |
ACACCGATATGCTGCAGTCA+GGG | - | tig0019900:39193-39212 | None:intergenic | 50.0% | |
CCCAGTTGAAATTCCTGGAG+AGG | + | tig0019900:39537-39556 | Msa1377320:intron | 50.0% | |
CCAATAGGTCCCAAAGCAGA+TGG | - | tig0019900:39915-39934 | None:intergenic | 50.0% | |
!! | CCATCTGCTTTGGGACCTAT+TGG | + | tig0019900:39912-39931 | Msa1377320:CDS | 50.0% |
GTAATTCTGCAGCACGAACC+AGG | - | tig0019900:39944-39963 | None:intergenic | 50.0% | |
CGTGCTGCAGAATTACTTCC+AGG | + | tig0019900:39948-39967 | Msa1377320:CDS | 50.0% | |
GCTGCAGAATTACTTCCAGG+TGG | + | tig0019900:39951-39970 | Msa1377320:intron | 50.0% | |
ATGGCATGGTTTAACCCACC+TGG | - | tig0019900:39969-39988 | None:intergenic | 50.0% | |
! | CTTTTCACTGTAGTCCCAGG+TGG | - | tig0019900:40122-40141 | None:intergenic | 50.0% |
TAGATGCTGTGGGAAGGAAG+AGG | + | tig0019900:40438-40457 | Msa1377320:intron | 50.0% | |
GAAGCCTTCGAGCAACTTCT+AGG | + | tig0019900:40583-40602 | Msa1377320:CDS | 50.0% | |
AAGGAAGGGTCCGAGCTTTA+TGG | + | tig0019900:40827-40846 | Msa1377320:CDS | 50.0% | |
! | AGGAAGGGTCCGAGCTTTAT+GGG | + | tig0019900:40828-40847 | Msa1377320:CDS | 50.0% |
ACGCCACGTGTCCCAAAAAA+GGG | + | tig0019900:41311-41330 | Msa1377320:intron | 50.0% | |
TAAGTTTGGAGGAGAGGGGA+GGG | + | tig0019900:41864-41883 | Msa1377320:intron | 50.0% | |
!! | GTATTGGAGGAGGGTTTTGG+AGG | + | tig0019900:42012-42031 | Msa1377320:intron | 50.0% |
TTTGGGAGTTTGGAGGGTAG+GGG | - | tig0019900:42198-42217 | None:intergenic | 50.0% | |
GTTTGGGAGTTTGGAGGGTA+GGG | - | tig0019900:42199-42218 | None:intergenic | 50.0% | |
TGTTTGGGAGTTTGGAGGGT+AGG | - | tig0019900:42200-42219 | None:intergenic | 50.0% | |
!! | GGCTTTGTTTGGGAGTTTGG+AGG | - | tig0019900:42205-42224 | None:intergenic | 50.0% |
! | ACTTTTACCCGAGCAGGGAA+TGG | - | tig0019900:42458-42477 | None:intergenic | 50.0% |
CCTACTTTCAGCTGGAACAG+GGG | - | tig0019900:42764-42783 | None:intergenic | 50.0% | |
CAACTCATCAGTTCGTGAGG+GGG | + | tig0019900:42795-42814 | Msa1377320:CDS | 50.0% | |
CACCGGATATGATCTTGTCC+AGG | - | tig0019900:42847-42866 | None:intergenic | 50.0% | |
AAGAGGTGACCCATTTGCAC+CGG | - | tig0019900:42864-42883 | None:intergenic | 50.0% | |
!!! | GGGAATAAGGGGTTTTAGGC+AGG | - | tig0019900:43412-43431 | None:intergenic | 50.0% |
GGTCCTCTCGTTGTTAAAGC+AGG | + | tig0019900:43792-43811 | Msa1377320:intron | 50.0% | |
TCCCCTGCTTTAACAACGAG+AGG | - | tig0019900:43798-43817 | None:intergenic | 50.0% | |
TCTCGTTGTTAAAGCAGGGG+AGG | + | tig0019900:43797-43816 | Msa1377320:intron | 50.0% | |
!!! | TCTTTTGGAGCAAGGGGACA+TGG | + | tig0019900:44318-44337 | Msa1377320:CDS | 50.0% |
AGAGCACGTACTGCAGAATG+TGG | - | tig0019900:44677-44696 | None:intergenic | 50.0% | |
CATTCTGCAGTACGTGCTCT+TGG | + | tig0019900:44677-44696 | Msa1377320:CDS | 50.0% | |
GTAACTCAAGAACCGTAGCC+CGG | + | tig0019900:45117-45136 | Msa1377320:intron | 50.0% | |
GGATCTTATGATCCGGGCTA+CGG | - | tig0019900:45132-45151 | None:intergenic | 50.0% | |
GTGAGGGGCTCATTGTTCTT+TGG | + | tig0019900:45267-45286 | Msa1377320:intron | 50.0% | |
GGGAGTCCTGCACATAGATA+TGG | + | tig0019900:45790-45809 | Msa1377320:CDS | 50.0% | |
! | ACTGGCCTACATGGGAATTG+AGG | + | tig0019900:46422-46441 | Msa1377320:CDS | 50.0% |
CGATGCCAAATTCCAGTGTC+TGG | - | tig0019900:46454-46473 | None:intergenic | 50.0% | |
AATCGATCCTCCACCGTCTC+AGG | + | tig0019900:28324-28343 | Msa1377320:CDS | 55.0% | |
! | ACAGCGTTTTCCTGAGACGG+TGG | - | tig0019900:28337-28356 | None:intergenic | 55.0% |
ACGCTGTAACTGCCGATGAC+TGG | + | tig0019900:28350-28369 | Msa1377320:CDS | 55.0% | |
CTGTAACTGCCGATGACTGG+CGG | + | tig0019900:28353-28372 | Msa1377320:CDS | 55.0% | |
! | GGTGATTCGGAGAACGACGA+CGG | - | tig0019900:28404-28423 | None:intergenic | 55.0% |
GTCGTCGTTCTCCGAATCAC+CGG | + | tig0019900:28403-28422 | Msa1377320:CDS | 55.0% | |
GGTAGCGCAGCTAGAATCAG+TGG | - | tig0019900:28452-28471 | None:intergenic | 55.0% | |
GATGCACAGGAACCTCTTCC+CGG | - | tig0019900:28652-28671 | None:intergenic | 55.0% | |
CAAGCAGCTTCAGGAGCAAG+AGG | - | tig0019900:29789-29808 | None:intergenic | 55.0% | |
GCTCCTGAAGCTGCTTGTGT+TGG | + | tig0019900:29792-29811 | Msa1377320:CDS | 55.0% | |
TACCGGCCAAGATGGAAACC+TGG | - | tig0019900:30392-30411 | None:intergenic | 55.0% | |
GGCCGGTACTATTGCTCGTT+TGG | + | tig0019900:30404-30423 | Msa1377320:CDS | 55.0% | |
! | GCCGACTCTATCAGTGATGC+TGG | + | tig0019900:30873-30892 | Msa1377320:intron | 55.0% |
! | CAGCATCTGGGACCAAAGGA+GGG | + | tig0019900:31525-31544 | Msa1377320:CDS | 55.0% |
GGAACCACTTGACCCTCCTT+TGG | - | tig0019900:31540-31559 | None:intergenic | 55.0% | |
AGATTGGCAAGGTAGGGCAG+TGG | + | tig0019900:31568-31587 | Msa1377320:CDS | 55.0% | |
AGCAAGCTCACTCGATCCAG+AGG | - | tig0019900:31641-31660 | None:intergenic | 55.0% | |
! | GGAAGCCGGTTTCAATACCC+CGG | + | tig0019900:31790-31809 | Msa1377320:CDS | 55.0% |
! | GAAGCCGGTTTCAATACCCC+GGG | + | tig0019900:31791-31810 | Msa1377320:CDS | 55.0% |
! | AAGCCGGTTTCAATACCCCG+GGG | + | tig0019900:31792-31811 | Msa1377320:CDS | 55.0% |
!! | GTACCCCGGGGTATTGAAAC+CGG | - | tig0019900:31798-31817 | None:intergenic | 55.0% |
AATACCCCGGGGTACACTTC+AGG | + | tig0019900:31803-31822 | Msa1377320:CDS | 55.0% | |
CAAACCTGAAGTGTACCCCG+GGG | - | tig0019900:31810-31829 | None:intergenic | 55.0% | |
CTTTCCTGTTCCTCCATCCC+TGG | + | tig0019900:32191-32210 | Msa1377320:intron | 55.0% | |
GAGAAATCGTCCAGGGATGG+AGG | - | tig0019900:32204-32223 | None:intergenic | 55.0% | |
GCTTCTCCTGCCACTGAAAC+TGG | + | tig0019900:33136-33155 | Msa1377320:CDS | 55.0% | |
TGTTCATAGGCTGGACCACC+TGG | - | tig0019900:33273-33292 | None:intergenic | 55.0% | |
TGTTGCGAGTAGCGTGCGAT+AGG | + | tig0019900:33993-34012 | Msa1377320:intron | 55.0% | |
GGCTCAACGGATCTTGGACA+AGG | - | tig0019900:35194-35213 | None:intergenic | 55.0% | |
! | AGCGGTGACTTGATAGCACG+TGG | - | tig0019900:35215-35234 | None:intergenic | 55.0% |
TACATGGGATCAGGAGGGGT+TGG | - | tig0019900:35538-35557 | None:intergenic | 55.0% | |
TCATGCACAAGGGTCGTTGC+TGG | + | tig0019900:37219-37238 | Msa1377320:intron | 55.0% | |
!! | AAGGGGTGCTCGAGTACCAT+TGG | + | tig0019900:37434-37453 | Msa1377320:CDS | 55.0% |
! | GGGGAGGTGCATACCATTCA+TGG | - | tig0019900:38226-38245 | None:intergenic | 55.0% |
TCCCGAGTGTATATCTGGGG+AGG | - | tig0019900:38242-38261 | None:intergenic | 55.0% | |
AGGCAATCGGGCTGAAAAGC+AGG | - | tig0019900:38293-38312 | None:intergenic | 55.0% | |
GACTGGTGAACGTGCTTGTG+GGG | + | tig0019900:38370-38389 | Msa1377320:CDS | 55.0% | |
ACTGGTGAACGTGCTTGTGG+GGG | + | tig0019900:38371-38390 | Msa1377320:CDS | 55.0% | |
! | TGTGGGGGAGATGTTGGTGA+AGG | + | tig0019900:38386-38405 | Msa1377320:CDS | 55.0% |
!! | GGTTGATGGTGTCCCTAGCT+TGG | + | tig0019900:38424-38443 | Msa1377320:CDS | 55.0% |
AGTGCCCGATGCATTTGTCG+TGG | - | tig0019900:38651-38670 | None:intergenic | 55.0% | |
CTAGAGCTCCCGCATATGCA+AGG | + | tig0019900:38979-38998 | Msa1377320:intron | 55.0% | |
CTCTCGGACCTTGCATATGC+GGG | - | tig0019900:38990-39009 | None:intergenic | 55.0% | |
CCTCTCGGACCTTGCATATG+CGG | - | tig0019900:38991-39010 | None:intergenic | 55.0% | |
CGCATATGCAAGGTCCGAGA+GGG | + | tig0019900:38989-39008 | Msa1377320:intron | 55.0% | |
GCATATGCAAGGTCCGAGAG+GGG | + | tig0019900:38990-39009 | Msa1377320:intron | 55.0% | |
CATATGCAAGGTCCGAGAGG+GGG | + | tig0019900:38991-39010 | Msa1377320:intron | 55.0% | |
TGAGGCCTAAAGCCCTTGCT+TGG | + | tig0019900:39146-39165 | Msa1377320:intron | 55.0% | |
GAGGCCTAAAGCCCTTGCTT+GGG | + | tig0019900:39147-39166 | Msa1377320:intron | 55.0% | |
GCAACCCAAGCAAGGGCTTT+AGG | - | tig0019900:39154-39173 | None:intergenic | 55.0% | |
! | AAGCCCTTGCTTGGGTTGCT+TGG | + | tig0019900:39155-39174 | Msa1377320:intron | 55.0% |
GACACCGATATGCTGCAGTC+AGG | - | tig0019900:39194-39213 | None:intergenic | 55.0% | |
!! | CGAACCAGGGAAGCACCAAT+AGG | - | tig0019900:39930-39949 | None:intergenic | 55.0% |
! | GGAAGGGTCCGAGCTTTATG+GGG | + | tig0019900:40829-40848 | Msa1377320:CDS | 55.0% |
ATGGGGAAGCTTCTCCACTC+AGG | + | tig0019900:40846-40865 | Msa1377320:CDS | 55.0% | |
GGTGGGTGGCCCATATTGAT+AGG | - | tig0019900:41151-41170 | None:intergenic | 55.0% | |
GACGCCACGTGTCCCAAAAA+AGG | + | tig0019900:41310-41329 | Msa1377320:intron | 55.0% | |
!!! | TGGCCCTTTTTTGGGACACG+TGG | - | tig0019900:41317-41336 | None:intergenic | 55.0% |
GTAAGTTTGGAGGAGAGGGG+AGG | + | tig0019900:41863-41882 | Msa1377320:intron | 55.0% | |
AAGTTTGGAGGAGAGGGGAG+GGG | + | tig0019900:41865-41884 | Msa1377320:intron | 55.0% | |
GGGGAACGGAAGTCTTTGGA+AGG | - | tig0019900:42179-42198 | None:intergenic | 55.0% | |
GGTAGGGGAACGGAAGTCTT+TGG | - | tig0019900:42183-42202 | None:intergenic | 55.0% | |
GAGTTTGGAGGGTAGGGGAA+CGG | - | tig0019900:42193-42212 | None:intergenic | 55.0% | |
GTCCTCACAAGGGCAACTTG+CGG | - | tig0019900:42521-42540 | None:intergenic | 55.0% | |
CCCCTGTTCCAGCTGAAAGT+AGG | + | tig0019900:42761-42780 | Msa1377320:intron | 55.0% | |
ATCAACACTCCCCCTCAAGC+TGG | + | tig0019900:43598-43617 | Msa1377320:intron | 55.0% | |
TGCTTGTGTCTAGGGACGAG+AGG | + | tig0019900:44568-44587 | Msa1377320:intron | 55.0% | |
GTGGGAGCAGATGTAAGGGA+TGG | + | tig0019900:44602-44621 | Msa1377320:CDS | 55.0% | |
AGAGTCTACGCAAGATCGGG+AGG | + | tig0019900:45074-45093 | Msa1377320:intron | 55.0% | |
GAGTCTACGCAAGATCGGGA+GGG | + | tig0019900:45075-45094 | Msa1377320:intron | 55.0% | |
AGTCTACGCAAGATCGGGAG+GGG | + | tig0019900:45076-45095 | Msa1377320:intron | 55.0% | |
GGACTTGTGGCTTTCCATCG+AGG | - | tig0019900:46378-46397 | None:intergenic | 55.0% | |
! | GCGTTTTCCTGAGACGGTGG+AGG | - | tig0019900:28334-28353 | None:intergenic | 60.0% |
ATTCGGAGAACGACGACGGC+CGG | - | tig0019900:28400-28419 | None:intergenic | 60.0% | |
! | CAGGCAGCATCTGGGACCAA+AGG | + | tig0019900:31521-31540 | Msa1377320:CDS | 60.0% |
! | GCAGCATCTGGGACCAAAGG+AGG | + | tig0019900:31524-31543 | Msa1377320:CDS | 60.0% |
GGGACCAAAGGAGGGTCAAG+TGG | + | tig0019900:31533-31552 | Msa1377320:CDS | 60.0% | |
TCGTCCAGGGATGGAGGAAC+AGG | - | tig0019900:32198-32217 | None:intergenic | 60.0% | |
GGCAGTCCTCACCTACAAGC+CGG | + | tig0019900:35117-35136 | Msa1377320:intron | 60.0% | |
GCACGTGGCTCAACGGATCT+TGG | - | tig0019900:35200-35219 | None:intergenic | 60.0% | |
TCACCGCTATCGGGCCACTT+GGG | + | tig0019900:35227-35246 | Msa1377320:intron | 60.0% | |
TGACCCAAGTGGCCCGATAG+CGG | - | tig0019900:35233-35252 | None:intergenic | 60.0% | |
CATCTCGAGGGTGACCCAAG+TGG | - | tig0019900:35244-35263 | None:intergenic | 60.0% | |
ACACACACCCCTCACGCCTA+GGG | - | tig0019900:35272-35291 | None:intergenic | 60.0% | |
AACACACACCCCTCACGCCT+AGG | - | tig0019900:35273-35292 | None:intergenic | 60.0% | |
!! | CACAGTGAGGGGTGTCAGGT+TGG | - | tig0019900:35848-35867 | None:intergenic | 60.0% |
GCACAAGGGTCGTTGCTGGA+AGG | + | tig0019900:37223-37242 | Msa1377320:intron | 60.0% | |
GCTACGCGGATCGTCATCGA+AGG | + | tig0019900:37466-37485 | Msa1377320:CDS | 60.0% | |
CGCGGATCGTCATCGAAGGA+AGG | + | tig0019900:37470-37489 | Msa1377320:CDS | 60.0% | |
CTGATGGCTGCAGTCGGTGT+TGG | + | tig0019900:38187-38206 | Msa1377320:intron | 60.0% | |
!! | GGGATGACAGTACTGGCCTG+TGG | + | tig0019900:38258-38277 | Msa1377320:CDS | 60.0% |
CGTGCTTGTGGGGGAGATGT+TGG | + | tig0019900:38380-38399 | Msa1377320:CDS | 60.0% | |
!! | TTAATCTCTAGGGCCGGCCC+TGG | - | tig0019900:38773-38792 | None:intergenic | 60.0% |
! | ATGCGGGAGCTCTAGTGCAC+CGG | - | tig0019900:38974-38993 | None:intergenic | 60.0% |
CCGCATATGCAAGGTCCGAG+AGG | + | tig0019900:38988-39007 | Msa1377320:intron | 60.0% | |
! | CAAATGGTGGGACCCCCTCT+CGG | - | tig0019900:39006-39025 | None:intergenic | 60.0% |
GGGCCAAGCAACCCAAGCAA+GGG | - | tig0019900:39161-39180 | None:intergenic | 60.0% | |
AGGGCCAAGCAACCCAAGCA+AGG | - | tig0019900:39162-39181 | None:intergenic | 60.0% | |
! | GCTTGGGTTGCTTGGCCCTT+AGG | + | tig0019900:39163-39182 | Msa1377320:intron | 60.0% |
CGATATGCTGCAGTCAGGGC+CGG | - | tig0019900:39189-39208 | None:intergenic | 60.0% | |
CGGCCCTGACTGCAGCATAT+CGG | + | tig0019900:39187-39206 | Msa1377320:intron | 60.0% | |
! | GGGACCTATTGGTGCTTCCC+TGG | + | tig0019900:39923-39942 | Msa1377320:CDS | 60.0% |
!! | CCTCGACATAATGCCGGCTC+TGG | - | tig0019900:40534-40553 | None:intergenic | 60.0% |
CCAGAGCCGGCATTATGTCG+AGG | + | tig0019900:40531-40550 | Msa1377320:intron | 60.0% | |
! | TCCCAATAGTGCTGGGCGTG+AGG | + | tig0019900:41190-41209 | Msa1377320:intron | 60.0% |
CCCTCACGCCCAGCACTATT+GGG | - | tig0019900:41194-41213 | None:intergenic | 60.0% | |
! | CCCAATAGTGCTGGGCGTGA+GGG | + | tig0019900:41191-41210 | Msa1377320:intron | 60.0% |
! | CCAATAGTGCTGGGCGTGAG+GGG | + | tig0019900:41192-41211 | Msa1377320:intron | 60.0% |
! | CAATAGTGCTGGGCGTGAGG+GGG | + | tig0019900:41193-41212 | Msa1377320:intron | 60.0% |
TCCTACACTCCCCCTCAAGC+TGG | + | tig0019900:42418-42437 | Msa1377320:intron | 60.0% | |
! | ACCAGCTTGAGGGGGAGTGT+AGG | - | tig0019900:42422-42441 | None:intergenic | 60.0% |
GTCCGCAAGTTGCCCTTGTG+AGG | + | tig0019900:42516-42535 | Msa1377320:intron | 60.0% | |
ATCACCCAGCGCTGCCGCTA+AGG | + | tig0019900:28282-28301 | Msa1377320:CDS | 65.0% | |
TTCGCCTTAGCGGCAGCGCT+GGG | - | tig0019900:28289-28308 | None:intergenic | 65.0% | |
ATTCGCCTTAGCGGCAGCGC+TGG | - | tig0019900:28290-28309 | None:intergenic | 65.0% | |
AGGGCAGTGGCCCTGAATGC+TGG | + | tig0019900:31581-31600 | Msa1377320:CDS | 65.0% | |
GGGCAGTGGCCCTGAATGCT+GGG | + | tig0019900:31582-31601 | Msa1377320:CDS | 65.0% | |
GGCAGTGGCCCTGAATGCTG+GGG | + | tig0019900:31583-31602 | Msa1377320:CDS | 65.0% | |
GCAGTGGCCCTGAATGCTGG+GGG | + | tig0019900:31584-31603 | Msa1377320:CDS | 65.0% | |
GTCACCGCTATCGGGCCACT+TGG | + | tig0019900:35226-35245 | Msa1377320:intron | 65.0% | |
!! | GGTGCACAGTGAGGGGTGTC+AGG | - | tig0019900:35852-35871 | None:intergenic | 65.0% |
! | TGCGGGAGCTCTAGTGCACC+GGG | - | tig0019900:38973-38992 | None:intergenic | 65.0% |
CGAGAGGGGGTCCCACCATT+TGG | + | tig0019900:39004-39023 | Msa1377320:intron | 65.0% | |
GGGTTGCTTGGCCCTTAGGC+CGG | + | tig0019900:39167-39186 | Msa1377320:intron | 65.0% | |
TGCAGTCAGGGCCGGCCTAA+GGG | - | tig0019900:39181-39200 | None:intergenic | 65.0% | |
CCCCTCACGCCCAGCACTAT+TGG | - | tig0019900:41195-41214 | None:intergenic | 65.0% | |
TTTGGAGGAGAGGGGAGGGG+AGG | + | tig0019900:41868-41887 | Msa1377320:intron | 65.0% | |
TTGGAGGAGAGGGGAGGGGA+GGG | + | tig0019900:41869-41888 | Msa1377320:intron | 65.0% | |
AGAGGGGAGGGGAGGGGTTT+GGG | + | tig0019900:41876-41895 | Msa1377320:intron | 65.0% | |
CTGCAGTCAGGGCCGGCCTA+AGG | - | tig0019900:39182-39201 | None:intergenic | 70.0% | |
TGGAGGAGAGGGGAGGGGAG+GGG | + | tig0019900:41870-41889 | Msa1377320:intron | 70.0% | |
GAGAGGGGAGGGGAGGGGTT+TGG | + | tig0019900:41875-41894 | Msa1377320:intron | 70.0% | |
GAGGGGAGGGGAGGGGTTTG+GGG | + | tig0019900:41877-41896 | Msa1377320:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019900 | gene | 28164 | 46603 | 28164 | ID=Msa1377320;Name=Msa1377320 |
tig0019900 | mRNA | 28164 | 46603 | 28164 | ID=Msa1377320-mRNA-1;Parent=Msa1377320;Name=Msa1377320-mRNA-1;_AED=0.32;_eAED=0.32;_QI=92|0.86|0.87|1|1|1|24|93|1108 |
tig0019900 | exon | 28164 | 28532 | 28164 | ID=Msa1377320-mRNA-1:exon:5595;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 28618 | 28688 | 28618 | ID=Msa1377320-mRNA-1:exon:5596;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 29720 | 29854 | 29720 | ID=Msa1377320-mRNA-1:exon:5597;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 30393 | 30456 | 30393 | ID=Msa1377320-mRNA-1:exon:5598;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 30552 | 30588 | 30552 | ID=Msa1377320-mRNA-1:exon:5599;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 31466 | 31649 | 31466 | ID=Msa1377320-mRNA-1:exon:5600;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 31735 | 31824 | 31735 | ID=Msa1377320-mRNA-1:exon:5601;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 32955 | 33020 | 32955 | ID=Msa1377320-mRNA-1:exon:5602;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 33124 | 33180 | 33124 | ID=Msa1377320-mRNA-1:exon:5603;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 33267 | 33332 | 33267 | ID=Msa1377320-mRNA-1:exon:5604;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 34562 | 34669 | 34562 | ID=Msa1377320-mRNA-1:exon:5605;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 36400 | 36480 | 36400 | ID=Msa1377320-mRNA-1:exon:5606;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 36901 | 36950 | 36901 | ID=Msa1377320-mRNA-1:exon:5607;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 37326 | 37491 | 37326 | ID=Msa1377320-mRNA-1:exon:5608;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 38200 | 38706 | 38200 | ID=Msa1377320-mRNA-1:exon:5609;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 39376 | 39498 | 39376 | ID=Msa1377320-mRNA-1:exon:5610;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 39864 | 39969 | 39864 | ID=Msa1377320-mRNA-1:exon:5611;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 40535 | 40705 | 40535 | ID=Msa1377320-mRNA-1:exon:5612;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 40788 | 40867 | 40788 | ID=Msa1377320-mRNA-1:exon:5613;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 42773 | 42997 | 42773 | ID=Msa1377320-mRNA-1:exon:5614;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 44241 | 44456 | 44241 | ID=Msa1377320-mRNA-1:exon:5615;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 44581 | 44738 | 44581 | ID=Msa1377320-mRNA-1:exon:5616;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 45780 | 45891 | 45780 | ID=Msa1377320-mRNA-1:exon:5617;Parent=Msa1377320-mRNA-1 |
tig0019900 | exon | 46334 | 46603 | 46334 | ID=Msa1377320-mRNA-1:exon:5618;Parent=Msa1377320-mRNA-1 |
tig0019900 | five_prime_UTR | 28164 | 28255 | 28164 | ID=Msa1377320-mRNA-1:five_prime_utr;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 28256 | 28532 | 28256 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 28618 | 28688 | 28618 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 29720 | 29854 | 29720 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 30393 | 30456 | 30393 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 30552 | 30588 | 30552 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 31466 | 31649 | 31466 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 31735 | 31824 | 31735 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 32955 | 33020 | 32955 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 33124 | 33180 | 33124 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 33267 | 33332 | 33267 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 34562 | 34669 | 34562 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 36400 | 36480 | 36400 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 36901 | 36950 | 36901 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 37326 | 37491 | 37326 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 38200 | 38706 | 38200 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 39376 | 39498 | 39376 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 39864 | 39969 | 39864 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 40535 | 40705 | 40535 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 40788 | 40867 | 40788 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 42773 | 42997 | 42773 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 44241 | 44456 | 44241 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 44581 | 44738 | 44581 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 45780 | 45891 | 45780 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | CDS | 46334 | 46510 | 46334 | ID=Msa1377320-mRNA-1:cds;Parent=Msa1377320-mRNA-1 |
tig0019900 | three_prime_UTR | 46511 | 46603 | 46511 | ID=Msa1377320-mRNA-1:three_prime_utr;Parent=Msa1377320-mRNA-1 |
Gene Sequence |
Protein sequence |