Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383290 | XP_003603950.1 | 70.690 | 290 | 16 | 3 | 1 | 221 | 1 | 290 | 3.46e-120 | 359 |
| Msa1383290 | XP_003603950.1 | 84.286 | 140 | 19 | 1 | 223 | 359 | 2 | 141 | 3.46e-72 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383290 | G7J752 | 70.690 | 290 | 16 | 3 | 1 | 221 | 1 | 290 | 1.65e-120 | 359 |
| Msa1383290 | G7J752 | 84.286 | 140 | 19 | 1 | 223 | 359 | 2 | 141 | 1.65e-72 | 237 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1368490 | Msa1383290 | 0.810349 | 1.204578e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383290 | MtrunA17_Chr3g0144781 | 70.690 | 290 | 16 | 3 | 1 | 221 | 1 | 290 | 3.18e-124 | 359 |
| Msa1383290 | MtrunA17_Chr3g0144781 | 84.286 | 140 | 19 | 1 | 223 | 359 | 2 | 141 | 3.18e-76 | 237 |
| Msa1383290 | MtrunA17_Chr3g0144751 | 62.245 | 294 | 36 | 4 | 1 | 221 | 1 | 292 | 1.43e-106 | 314 |
| Msa1383290 | MtrunA17_Chr3g0144751 | 79.433 | 141 | 24 | 3 | 223 | 358 | 2 | 142 | 9.26e-64 | 205 |
| Msa1383290 | MtrunA17_Chr4g0035261 | 41.356 | 295 | 99 | 7 | 1 | 221 | 1 | 295 | 8.47e-50 | 169 |
| Msa1383290 | MtrunA17_Chr4g0035261 | 62.411 | 141 | 47 | 3 | 225 | 359 | 4 | 144 | 3.67e-49 | 167 |
| Msa1383290 | MtrunA17_Chr4g0035251 | 59.859 | 142 | 54 | 2 | 221 | 359 | 1 | 142 | 1.11e-47 | 163 |
| Msa1383290 | MtrunA17_Chr4g0035251 | 38.079 | 302 | 101 | 9 | 1 | 221 | 1 | 297 | 6.82e-45 | 156 |
| Msa1383290 | MtrunA17_Chr3g0144771 | 96.053 | 76 | 3 | 0 | 221 | 296 | 1 | 76 | 1.33e-43 | 145 |
| Msa1383290 | MtrunA17_Chr3g0144771 | 70.130 | 77 | 14 | 2 | 2 | 72 | 3 | 76 | 4.21e-25 | 97.1 |
| Msa1383290 | MtrunA17_Chr4g0035231 | 50.370 | 135 | 64 | 2 | 228 | 359 | 7 | 141 | 2.54e-30 | 117 |
| Msa1383290 | MtrunA17_Chr4g0035231 | 35.034 | 294 | 114 | 9 | 1 | 221 | 1 | 290 | 3.29e-29 | 114 |
| Msa1383290 | MtrunA17_Chr4g0035221 | 45.000 | 140 | 74 | 2 | 223 | 359 | 2 | 141 | 7.89e-26 | 105 |
| Msa1383290 | MtrunA17_Chr4g0035221 | 30.612 | 294 | 127 | 7 | 1 | 221 | 1 | 290 | 2.04e-21 | 93.2 |
| Msa1383290 | MtrunA17_Chr8g0370921 | 43.802 | 121 | 62 | 2 | 231 | 347 | 18 | 136 | 5.68e-20 | 89.4 |
| Msa1383290 | MtrunA17_Chr8g0370921 | 28.975 | 283 | 125 | 11 | 10 | 219 | 18 | 297 | 2.72e-12 | 67.0 |
| Msa1383290 | MtrunA17_Chr8g0370891 | 37.405 | 131 | 78 | 2 | 233 | 359 | 5 | 135 | 1.93e-19 | 87.4 |
| Msa1383290 | MtrunA17_Chr5g0406411 | 39.850 | 133 | 74 | 3 | 232 | 359 | 5 | 136 | 6.63e-19 | 85.9 |
| Msa1383290 | MtrunA17_Chr5g0406501 | 36.090 | 133 | 81 | 2 | 231 | 359 | 3 | 135 | 1.34e-18 | 85.1 |
| Msa1383290 | MtrunA17_Chr5g0406531 | 36.842 | 133 | 80 | 2 | 231 | 359 | 3 | 135 | 2.55e-18 | 84.0 |
| Msa1383290 | MtrunA17_Chr8g0370901 | 34.109 | 129 | 83 | 1 | 233 | 359 | 5 | 133 | 4.21e-18 | 83.6 |
| Msa1383290 | MtrunA17_Chr5g0406391 | 36.364 | 132 | 80 | 2 | 232 | 359 | 5 | 136 | 7.92e-18 | 82.8 |
| Msa1383290 | MtrunA17_Chr5g0406561 | 35.606 | 132 | 81 | 2 | 232 | 359 | 5 | 136 | 1.12e-17 | 82.4 |
| Msa1383290 | MtrunA17_Chr5g0406401 | 35.878 | 131 | 80 | 2 | 233 | 359 | 6 | 136 | 2.63e-17 | 81.3 |
| Msa1383290 | MtrunA17_Chr5g0406421 | 37.594 | 133 | 77 | 3 | 232 | 359 | 5 | 136 | 4.60e-17 | 80.5 |
| Msa1383290 | MtrunA17_Chr5g0406371 | 35.338 | 133 | 81 | 3 | 232 | 359 | 5 | 137 | 6.57e-17 | 80.1 |
| Msa1383290 | MtrunA17_Chr5g0406601 | 37.879 | 132 | 76 | 3 | 233 | 359 | 6 | 136 | 1.82e-16 | 79.0 |
| Msa1383290 | MtrunA17_Chr5g0406481 | 35.294 | 136 | 82 | 3 | 228 | 359 | 3 | 136 | 7.27e-16 | 77.0 |
| Msa1383290 | MtrunA17_Chr5g0406511 | 35.294 | 136 | 82 | 3 | 228 | 359 | 3 | 136 | 8.64e-16 | 77.0 |
| Msa1383290 | MtrunA17_Chr8g0370881 | 34.586 | 133 | 83 | 2 | 233 | 361 | 5 | 137 | 5.68e-15 | 74.7 |
| Msa1383290 | MtrunA17_Chr5g0406441 | 35.000 | 100 | 63 | 1 | 231 | 328 | 3 | 102 | 5.93e-13 | 64.7 |
| Msa1383290 | MtrunA17_Chr5g0406361 | 37.037 | 135 | 74 | 5 | 218 | 344 | 4 | 135 | 6.11e-13 | 68.9 |
| Msa1383290 | MtrunA17_Chr3g0143741 | 33.121 | 157 | 96 | 3 | 210 | 359 | 4 | 158 | 1.03e-12 | 68.2 |
| Msa1383290 | MtrunA17_Chr8g0370861 | 34.328 | 134 | 72 | 3 | 236 | 357 | 15 | 144 | 9.52e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383290 | AT2G17080.1 | 45.385 | 130 | 67 | 2 | 232 | 359 | 4 | 131 | 1.43e-23 | 99.0 |
| Msa1383290 | AT2G17080.1 | 32.830 | 265 | 109 | 9 | 11 | 219 | 4 | 255 | 3.04e-19 | 86.7 |
| Msa1383290 | AT2G17070.1 | 43.846 | 130 | 69 | 2 | 232 | 359 | 4 | 131 | 1.77e-21 | 92.8 |
| Msa1383290 | AT2G17070.1 | 33.208 | 265 | 108 | 10 | 11 | 219 | 4 | 255 | 2.93e-16 | 78.2 |
| Msa1383290 | AT4G35210.1 | 42.969 | 128 | 66 | 3 | 232 | 359 | 4 | 124 | 2.91e-20 | 89.4 |
| Msa1383290 | AT4G35200.1 | 44.531 | 128 | 64 | 3 | 232 | 359 | 4 | 124 | 3.31e-19 | 86.3 |
| Msa1383290 | AT2G17680.1 | 34.959 | 123 | 68 | 2 | 234 | 344 | 9 | 131 | 6.25e-14 | 72.0 |
| Msa1383290 | AT4G35690.1 | 31.250 | 128 | 82 | 3 | 236 | 358 | 11 | 137 | 5.89e-13 | 68.9 |
Find 77 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATGAGCATCAAGAAAAT+TGG | 0.183410 | tig0020577:+100447 | Msa1383290:CDS |
| TCATCGCTTTGCAATAAAAT+TGG | 0.188278 | tig0020577:+100356 | Msa1383290:CDS |
| AGTGGGAGCTGAATTAAATT+TGG | 0.256535 | tig0020577:-108045 | None:intergenic |
| GATTGAGCGACCGTGGAAAT+TGG | 0.275230 | tig0020577:-100237 | None:intergenic |
| GATCGGAGGCTTGCGAGATT+TGG | 0.279556 | tig0020577:+108011 | Msa1383290:CDS |
| AACATTTGGACACCTTATTA+AGG | 0.301677 | tig0020577:+107950 | Msa1383290:CDS |
| TTCATTGGAAGACCTTAATA+AGG | 0.311911 | tig0020577:-107962 | None:intergenic |
| CTCGCAAGCCTCCGATCTTA+TGG | 0.322245 | tig0020577:-108005 | None:intergenic |
| AAGGGCTTGAGTTTCTATTT+AGG | 0.333065 | tig0020577:+101029 | Msa1383290:CDS |
| AAATTGGGTGAATAACCTTT+TGG | 0.333764 | tig0020577:+100463 | Msa1383290:CDS |
| TTTCAAATTTGCCAAGGCTT+TGG | 0.343595 | tig0020577:-100660 | None:intergenic |
| TAATCAATGTCACTGTTTGA+TGG | 0.349790 | tig0020577:-100724 | None:intergenic |
| TCTTCAATGCAATCAACATT+TGG | 0.353560 | tig0020577:+107936 | Msa1383290:CDS |
| GCTTAAATGCAATGAGCATT+TGG | 0.355759 | tig0020577:+100289 | Msa1383290:CDS |
| CAATGATGAGGAGGTTTCAT+TGG | 0.360329 | tig0020577:-107977 | None:intergenic |
| ACCTCCCCTTCTTCTTATGA+TGG | 0.377879 | tig0020577:-108208 | None:intergenic |
| GGGCTGAATAAGTATGGAAA+TGG | 0.382277 | tig0020577:-100846 | None:intergenic |
| TAGTGAGCAAGCAACTCTTT+TGG | 0.384377 | tig0020577:-100867 | None:intergenic |
| GAAACTCAAGCCCTTCTTCA+AGG | 0.395499 | tig0020577:-101021 | None:intergenic |
| GCATTTGGACACCTTGTTAA+GGG | 0.401904 | tig0020577:+100304 | Msa1383290:CDS |
| AGCATTTGGACACCTTGTTA+AGG | 0.418977 | tig0020577:+100303 | Msa1383290:CDS |
| ACTGCAATGCTACATCCAAT+TGG | 0.433854 | tig0020577:-100913 | None:intergenic |
| AAGAAGAAGGGGAGGTGGAT+TGG | 0.448115 | tig0020577:+108215 | Msa1383290:CDS |
| TACAGTCAAAATCAAACAGC+TGG | 0.448408 | tig0020577:+100819 | Msa1383290:intron |
| ACATGAGCATCAAGAAAATT+GGG | 0.454816 | tig0020577:+100448 | Msa1383290:CDS |
| AAAATGGGTGAATAATTTGT+TGG | 0.458594 | tig0020577:+108101 | Msa1383290:CDS |
| TTCAATCCATCATAAGAAGA+AGG | 0.459796 | tig0020577:+108202 | Msa1383290:CDS |
| ACCAAGAATAGAAAAGTTGA+AGG | 0.462225 | tig0020577:+100947 | Msa1383290:CDS |
| TCGCTTTGCAATAAAATTGG+AGG | 0.467355 | tig0020577:+100359 | Msa1383290:CDS |
| ACACACATCTAAGAGTCTTA+AGG | 0.469840 | tig0020577:-108130 | None:intergenic |
| TTTCTTGATGCTCATGGACA+AGG | 0.483287 | tig0020577:-108080 | None:intergenic |
| AATACAAAATCAAATTTCCA+TGG | 0.489830 | tig0020577:+107874 | Msa1383290:CDS |
| TGCATTCAAGACCTTGAAGA+AGG | 0.492757 | tig0020577:+101010 | Msa1383290:CDS |
| ATGAGTGGGTGTGGTCTAGA+TGG | 0.496238 | tig0020577:-100266 | None:intergenic |
| CAATGATCTGCAAAACCACT+TGG | 0.501534 | tig0020577:+100973 | Msa1383290:CDS |
| ATTTGCCAAGGCTTTGGAGA+TGG | 0.514554 | tig0020577:-100654 | None:intergenic |
| TCAATCCATCATAAGAAGAA+GGG | 0.520989 | tig0020577:+108203 | Msa1383290:CDS |
| CGATGATGAGGAGGAAGAGG+TGG | 0.530624 | tig0020577:-100339 | None:intergenic |
| AATTCTTGACACATCTAGAA+AGG | 0.532896 | tig0020577:+108259 | Msa1383290:CDS |
| AAGCGATGATGAGGAGGAAG+AGG | 0.539983 | tig0020577:-100342 | None:intergenic |
| AACTCAAAATCCAATTTCCA+CGG | 0.542254 | tig0020577:+100227 | Msa1383290:CDS |
| TGGGTGAATAATTTGTTGGA+TGG | 0.545300 | tig0020577:+108105 | Msa1383290:CDS |
| ATCATAAGAAGAAGGGGAGG+TGG | 0.547250 | tig0020577:+108210 | Msa1383290:CDS |
| AAAGGCCATCTCCAAAGCCT+TGG | 0.547447 | tig0020577:+100649 | Msa1383290:CDS |
| GCCTTAACGATCCATCCAAA+AGG | 0.556506 | tig0020577:-100478 | None:intergenic |
| AATGAGTGGGTGTGGTCTAG+AGG | 0.562306 | tig0020577:-107914 | None:intergenic |
| AAAGCCTTGGCAAATTTGAA+AGG | 0.565135 | tig0020577:+100662 | Msa1383290:CDS |
| ACAGTCAAAATCAAACAGCT+GGG | 0.566626 | tig0020577:+100820 | Msa1383290:intron |
| GCAAACTGTTTGAGCGACCA+TGG | 0.569072 | tig0020577:-107891 | None:intergenic |
| TTCAATTGAAGCCCTTAACA+AGG | 0.571555 | tig0020577:-100315 | None:intergenic |
| TTTATTGCAAAGCGATGATG+AGG | 0.572802 | tig0020577:-100351 | None:intergenic |
| ATGAGTGGGTGTGGTCTAGA+GGG | 0.577639 | tig0020577:-107913 | None:intergenic |
| CATTTAAGCATGAGTGGGTG+TGG | 0.581140 | tig0020577:-100275 | None:intergenic |
| ATTGCCTTTCAAATTTGCCA+AGG | 0.583033 | tig0020577:-100666 | None:intergenic |
| TTCTTGATGCTCATGGACAA+GGG | 0.587488 | tig0020577:-108079 | None:intergenic |
| GCATTCAAGACCTTGAAGAA+GGG | 0.589953 | tig0020577:+101011 | Msa1383290:CDS |
| CAATCCATCATAAGAAGAAG+GGG | 0.598707 | tig0020577:+108204 | Msa1383290:CDS |
| ACAAGGGCATCTTGAGTGAG+TGG | 0.601239 | tig0020577:-108063 | None:intergenic |
| CAAGGGCATCTTGAGTGAGT+GGG | 0.603726 | tig0020577:-108062 | None:intergenic |
| TCATTGCTTCACCATAAGAT+CGG | 0.606730 | tig0020577:+107994 | Msa1383290:CDS |
| TGGATTGGAGCTCACAGTTG+AGG | 0.611637 | tig0020577:+108230 | Msa1383290:CDS |
| CATTGAAGAATGAGTGGGTG+TGG | 0.616471 | tig0020577:-107922 | None:intergenic |
| GCAAGCTGATTGAGCGACCG+TGG | 0.616949 | tig0020577:-100244 | None:intergenic |
| TTCACACAAAAGAATGCACA+AGG | 0.621416 | tig0020577:+108175 | Msa1383290:CDS |
| CATTGCATTTAAGCATGAGT+GGG | 0.628158 | tig0020577:-100280 | None:intergenic |
| ATGGTGAAGCAATGATGAGG+AGG | 0.631479 | tig0020577:-107986 | None:intergenic |
| TTGCTTCACCATAAGATCGG+AGG | 0.634914 | tig0020577:+107997 | Msa1383290:CDS |
| ATTGCAAAGCGATGATGAGG+AGG | 0.636418 | tig0020577:-100348 | None:intergenic |
| AGAAGTGCATCTTGAGTGAG+TGG | 0.643283 | tig0020577:-100425 | None:intergenic |
| TCTTGACACATCTAGAAAGG+TGG | 0.648587 | tig0020577:+108262 | Msa1383290:CDS |
| TGATTGCATTGAAGAATGAG+TGG | 0.658029 | tig0020577:-107928 | None:intergenic |
| TCATTGCATTTAAGCATGAG+TGG | 0.669653 | tig0020577:-100281 | None:intergenic |
| GATTGCATTGAAGAATGAGT+GGG | 0.671939 | tig0020577:-107927 | None:intergenic |
| TCCATCATAAGAAGAAGGGG+AGG | 0.672802 | tig0020577:+108207 | Msa1383290:CDS |
| CAGTCAAAATCAAACAGCTG+GGG | 0.685114 | tig0020577:+100821 | Msa1383290:intron |
| CTTATGGTGAAGCAATGATG+AGG | 0.687584 | tig0020577:-107989 | None:intergenic |
| TCACACAAAAGAATGCACAA+GGG | 0.740302 | tig0020577:+108176 | Msa1383290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTTTTAAAAAATAT+AGG | - | tig0020577:101952-101971 | None:intergenic | 0.0% |
| !!! | TTAAAAAATTATAATTTTTT+TGG | + | tig0020577:102517-102536 | Msa1383290:intron | 0.0% |
| !!! | TAAAAAATTATAATTTTTTT+GGG | + | tig0020577:102518-102537 | Msa1383290:intron | 0.0% |
| !! | TATATATATATATATTATAA+TGG | - | tig0020577:107692-107711 | None:intergenic | 0.0% |
| !! | TTAGTTTATTTAATCAATAT+AGG | - | tig0020577:102182-102201 | None:intergenic | 10.0% |
| !!! | GAATTTAACTATATTTTTTT+GGG | + | tig0020577:102207-102226 | Msa1383290:intron | 10.0% |
| !! | ACAAAAATTTACTTAAAAAT+AGG | + | tig0020577:102591-102610 | Msa1383290:intron | 10.0% |
| !!! | AAAATTTTCAATCATTATTT+TGG | - | tig0020577:102619-102638 | None:intergenic | 10.0% |
| !!! | ATAATGATTGAAAATTTTAT+AGG | + | tig0020577:102621-102640 | Msa1383290:intron | 10.0% |
| !!! | TAATGATTGAAAATTTTATA+GGG | + | tig0020577:102622-102641 | Msa1383290:intron | 10.0% |
| !!! | AAATTCCTTTTAAAAAAATA+GGG | - | tig0020577:102746-102765 | None:intergenic | 10.0% |
| !!! | TAAATTCCTTTTAAAAAAAT+AGG | - | tig0020577:102747-102766 | None:intergenic | 10.0% |
| !!! | AATTCTTAGTTAATCATTTT+TGG | - | tig0020577:101390-101409 | None:intergenic | 15.0% |
| !! | TTAACTAAGAATTTATTTAG+AGG | + | tig0020577:101397-101416 | Msa1383290:intron | 15.0% |
| !!! | ACCATATTTTTTTAGAAATA+GGG | + | tig0020577:101846-101865 | Msa1383290:intron | 15.0% |
| !!! | TTTTCATTTAACTGAAATTT+TGG | - | tig0020577:101904-101923 | None:intergenic | 15.0% |
| !! | AATTTCAGTTAAATGAAAAT+AGG | + | tig0020577:101905-101924 | Msa1383290:intron | 15.0% |
| !!! | TCAATTTTAAATGAATTTTG+CGG | + | tig0020577:101972-101991 | Msa1383290:intron | 15.0% |
| !!! | TAAGTAATTGAATTTTGATT+GGG | - | tig0020577:102008-102027 | None:intergenic | 15.0% |
| !!! | CGAATTTAACTATATTTTTT+TGG | + | tig0020577:102206-102225 | Msa1383290:intron | 15.0% |
| !!! | ATATGTAGAAATCATATTTT+TGG | + | tig0020577:102358-102377 | Msa1383290:intron | 15.0% |
| !!! | GGTTAAATATGTTTTTAATA+GGG | - | tig0020577:102725-102744 | None:intergenic | 15.0% |
| !!! | TTTAACCCTATTTTTTTAAA+AGG | + | tig0020577:102738-102757 | Msa1383290:intron | 15.0% |
| !!! | AATAATCAGGTTTTTTTTTT+TGG | + | tig0020577:103581-103600 | Msa1383290:intron | 15.0% |
| !! | TTATAGAAAGAAAATCAATT+AGG | - | tig0020577:104059-104078 | None:intergenic | 15.0% |
| !!! | ATGTAAAGAATTTTATGATT+AGG | - | tig0020577:104125-104144 | None:intergenic | 15.0% |
| !! | TAAAATTCTTTACATGATTA+AGG | + | tig0020577:104130-104149 | Msa1383290:intron | 15.0% |
| !! | AAGTATTATAAAGAGATTTA+GGG | - | tig0020577:104695-104714 | None:intergenic | 15.0% |
| !! | TACTCAATTAAATTTAAACT+TGG | - | tig0020577:104894-104913 | None:intergenic | 15.0% |
| !!! | TTAATAAAGCTTTTAAAAGA+AGG | - | tig0020577:105480-105499 | None:intergenic | 15.0% |
| !!! | AGATTTATCAATTATTTTCT+TGG | + | tig0020577:105845-105864 | Msa1383290:intron | 15.0% |
| !!! | TCTATATCATATTTTTATCA+TGG | - | tig0020577:106500-106519 | None:intergenic | 15.0% |
| !! | AAATTATAATCCAATTCATT+TGG | - | tig0020577:106551-106570 | None:intergenic | 15.0% |
| !!! | GATTATAATTTATTTAGCTT+GGG | + | tig0020577:106560-106579 | Msa1383290:intron | 15.0% |
| !! | TATATATATTATAATGGTGT+TGG | - | tig0020577:107686-107705 | None:intergenic | 15.0% |
| !!! | AAATTTGATTTTGTATTCAA+AGG | - | tig0020577:107871-107890 | None:intergenic | 15.0% |
| !!! | TAGTTAATCATTTTTGGTTT+TGG | - | tig0020577:101384-101403 | None:intergenic | 20.0% |
| !!! | TTGTCTCATTTTTTTTTCAT+GGG | + | tig0020577:101711-101730 | Msa1383290:intron | 20.0% |
| !!! | CACCATATTTTTTTAGAAAT+AGG | + | tig0020577:101845-101864 | Msa1383290:intron | 20.0% |
| !!! | CCATATTTTTTTAGAAATAG+GGG | + | tig0020577:101847-101866 | Msa1383290:intron | 20.0% |
| !!! | CATATTTTTTTAGAAATAGG+GGG | + | tig0020577:101848-101867 | Msa1383290:intron | 20.0% |
| !!! | CAATTTTAAATGAATTTTGC+GGG | + | tig0020577:101973-101992 | Msa1383290:intron | 20.0% |
| !!! | CTAAGTAATTGAATTTTGAT+TGG | - | tig0020577:102009-102028 | None:intergenic | 20.0% |
| !!! | TTTTGGGTTAAATATGTTTT+TGG | + | tig0020577:102223-102242 | Msa1383290:intron | 20.0% |
| !!! | AGTTGAAGAAAATTTTTAGA+GGG | - | tig0020577:102281-102300 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGAAAATTTTTAG+AGG | - | tig0020577:102282-102301 | None:intergenic | 20.0% |
| !! | TACATATGAGTTTACTTTAA+AGG | - | tig0020577:102345-102364 | None:intergenic | 20.0% |
| !! | GAAAATTTGGTATATTCATA+AGG | + | tig0020577:102682-102701 | Msa1383290:intron | 20.0% |
| !!! | GGGTTAAATATGTTTTTAAT+AGG | - | tig0020577:102705-102724 | None:intergenic | 20.0% |
| !! | CAAATTAAACTACTAGTATT+AGG | - | tig0020577:102796-102815 | None:intergenic | 20.0% |
| !! | TTTGAAAAAATTATGATTCG+AGG | + | tig0020577:103042-103061 | Msa1383290:intron | 20.0% |
| !! | TACTAACTATAGAAATAATC+AGG | + | tig0020577:103568-103587 | Msa1383290:intron | 20.0% |
| !! | AACAAAATCGAAAGAAAATA+AGG | - | tig0020577:104168-104187 | None:intergenic | 20.0% |
| !! | ATTTCATATTTGTCAATTCT+TGG | - | tig0020577:104292-104311 | None:intergenic | 20.0% |
| !! | CAATAGATTATATGTTGATA+TGG | - | tig0020577:104670-104689 | None:intergenic | 20.0% |
| !! | AGTATTATAAAGAGATTTAG+GGG | - | tig0020577:104694-104713 | None:intergenic | 20.0% |
| !! | CAAGTATTATAAAGAGATTT+AGG | - | tig0020577:104696-104715 | None:intergenic | 20.0% |
| !!! | TGTTATTTGTAATGTTTTTC+AGG | + | tig0020577:104714-104733 | Msa1383290:intron | 20.0% |
| !! | GGATTATAATTTATTTAGCT+TGG | + | tig0020577:106559-106578 | Msa1383290:intron | 20.0% |
| !!! | GCATTTATCATTTTTCAAAA+AGG | + | tig0020577:106628-106647 | Msa1383290:intron | 20.0% |
| !! | AAATAAATATCAGGTTTAAG+AGG | + | tig0020577:107020-107039 | Msa1383290:intron | 20.0% |
| !!! | TTTTTCTTGAGAAAGAAAAA+TGG | + | tig0020577:107834-107853 | Msa1383290:intron | 20.0% |
| !! | AATACAAAATCAAATTTCCA+TGG | + | tig0020577:107874-107893 | Msa1383290:CDS | 20.0% |
| !!! | AAATTGGATTTTGAGTTCAA+AGG | - | tig0020577:100224-100243 | None:intergenic | 25.0% |
| ! | AAAATTCTTGACATCAAGAA+AGG | + | tig0020577:100619-100638 | Msa1383290:intron | 25.0% |
| ! | ATCAAGAAAGGTAGTAAAAA+AGG | + | tig0020577:100631-100650 | Msa1383290:intron | 25.0% |
| !! | AGATAAGATGTTGCAATTTT+TGG | - | tig0020577:100693-100712 | None:intergenic | 25.0% |
| ! | TATTGTGTGAAATGTAGATA+GGG | - | tig0020577:100777-100796 | None:intergenic | 25.0% |
| ! | ATATTGTGTGAAATGTAGAT+AGG | - | tig0020577:100778-100797 | None:intergenic | 25.0% |
| !! | ACAATATTGCAATTTTTCTC+AGG | + | tig0020577:100791-100810 | Msa1383290:intron | 25.0% |
| !! | CAATATTGCAATTTTTCTCA+GGG | + | tig0020577:100792-100811 | Msa1383290:intron | 25.0% |
| !! | TGAAAGTGAATTTTTCCAAT+TGG | + | tig0020577:100898-100917 | Msa1383290:CDS | 25.0% |
| ! | AAATAATCATCAGACTTAAG+CGG | - | tig0020577:101226-101245 | None:intergenic | 25.0% |
| ! | AATTGGGGGAAAAATAAAAA+TGG | - | tig0020577:101590-101609 | None:intergenic | 25.0% |
| !!! | ATTTTTATTTTTCCCCCAAT+TGG | + | tig0020577:101589-101608 | Msa1383290:intron | 25.0% |
| !! | TCTTTTTAATATGCCTTCTT+TGG | - | tig0020577:101662-101681 | None:intergenic | 25.0% |
| ! | CATGAAAAAAAAATGAGACA+AGG | - | tig0020577:101712-101731 | None:intergenic | 25.0% |
| !!! | CTTGTCTCATTTTTTTTTCA+TGG | + | tig0020577:101710-101729 | Msa1383290:intron | 25.0% |
| !! | TTTTTCATGGGTAATAATCA+AGG | + | tig0020577:101723-101742 | Msa1383290:intron | 25.0% |
| ! | AATCAAGGTGAAATTTAACA+TGG | + | tig0020577:101738-101757 | Msa1383290:intron | 25.0% |
| ! | ATCAAGGTGAAATTTAACAT+GGG | + | tig0020577:101739-101758 | Msa1383290:intron | 25.0% |
| !! | TTTTACCCTTAGATTAAGTA+AGG | + | tig0020577:101795-101814 | Msa1383290:intron | 25.0% |
| ! | ATGTTCCTTACTTAATCTAA+GGG | - | tig0020577:101803-101822 | None:intergenic | 25.0% |
| ! | TATGTTCCTTACTTAATCTA+AGG | - | tig0020577:101804-101823 | None:intergenic | 25.0% |
| !!! | CCCCTATTTCTAAAAAAATA+TGG | - | tig0020577:101850-101869 | None:intergenic | 25.0% |
| !!! | AAAATGGTGGTTTTAGAAAT+AGG | + | tig0020577:101874-101893 | Msa1383290:intron | 25.0% |
| !!! | AAATGGTGGTTTTAGAAATA+GGG | + | tig0020577:101875-101894 | Msa1383290:intron | 25.0% |
| ! | CTGTCTAACAAAACAAATAT+AGG | - | tig0020577:102038-102057 | None:intergenic | 25.0% |
| !! | TGAAGATGGAAAATTTTTGA+AGG | - | tig0020577:102310-102329 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTTCACTTT+TGG | + | tig0020577:102314-102333 | Msa1383290:intron | 25.0% |
| !! | TATGAGTTTACTTTAAAGGA+TGG | - | tig0020577:102341-102360 | None:intergenic | 25.0% |
| ! | GAGAAACTAAAACGAAAATT+TGG | + | tig0020577:102669-102688 | Msa1383290:intron | 25.0% |
| ! | ATTATGATTCGAGGAAATTA+TGG | + | tig0020577:103051-103070 | Msa1383290:intron | 25.0% |
| ! | TTTCATAGTTGCAACAATTA+GGG | - | tig0020577:103289-103308 | None:intergenic | 25.0% |
| !! | TTTTCATAGTTGCAACAATT+AGG | - | tig0020577:103290-103309 | None:intergenic | 25.0% |
| ! | AATTGTTGCAACTATGAAAA+AGG | + | tig0020577:103290-103309 | Msa1383290:intron | 25.0% |
| ! | ATTGTTGCAACTATGAAAAA+GGG | + | tig0020577:103291-103310 | Msa1383290:intron | 25.0% |
| !! | AAAGATCTGTTTATTTCTCT+AGG | - | tig0020577:103812-103831 | None:intergenic | 25.0% |
| ! | AATATGAAATGTTTACTACG+TGG | + | tig0020577:104302-104321 | Msa1383290:intron | 25.0% |
| ! | ATATGAAATGTTTACTACGT+GGG | + | tig0020577:104303-104322 | Msa1383290:intron | 25.0% |
| ! | AATAAATTCCACAAAAGATG+AGG | + | tig0020577:104369-104388 | Msa1383290:intron | 25.0% |
| ! | GTATCAATTAAACCAACTAT+TGG | + | tig0020577:104492-104511 | Msa1383290:intron | 25.0% |
| !!! | TATTTGTAATGTTTTTCAGG+TGG | + | tig0020577:104717-104736 | Msa1383290:intron | 25.0% |
| ! | ACAATTAAAACTCAGATTGT+CGG | - | tig0020577:104818-104837 | None:intergenic | 25.0% |
| !!! | CTGAGTTTTAATTGTAAAAC+TGG | + | tig0020577:104823-104842 | Msa1383290:intron | 25.0% |
| !!! | TTTTAATTGTAAAACTGGTC+AGG | + | tig0020577:104828-104847 | Msa1383290:intron | 25.0% |
| ! | TATATGCGATAAATTTGTAG+AGG | + | tig0020577:104946-104965 | Msa1383290:intron | 25.0% |
| ! | CAATATGTCAAAATTCTGAA+TGG | - | tig0020577:105011-105030 | None:intergenic | 25.0% |
| ! | ATCAATCTTTCTTTACACAT+GGG | + | tig0020577:105033-105052 | Msa1383290:intron | 25.0% |
| ! | GATCAATATTTAGAAGTAGA+AGG | + | tig0020577:105163-105182 | Msa1383290:intron | 25.0% |
| ! | GTATTCAATCAAATGAAATC+AGG | - | tig0020577:105458-105477 | None:intergenic | 25.0% |
| ! | ATGATATGGAAACAACAAAA+TGG | + | tig0020577:105718-105737 | Msa1383290:intron | 25.0% |
| ! | AATGTTAAATCTTAGCACAT+TGG | + | tig0020577:105791-105810 | Msa1383290:intron | 25.0% |
| ! | GTAGGATAATAATCTCTATT+TGG | - | tig0020577:105926-105945 | None:intergenic | 25.0% |
| ! | AATTATTGCTCATGTACTTA+AGG | + | tig0020577:106362-106381 | Msa1383290:intron | 25.0% |
| ! | ATTATTGCTCATGTACTTAA+GGG | + | tig0020577:106363-106382 | Msa1383290:intron | 25.0% |
| ! | TAACAACAAAAAACAACAAC+AGG | + | tig0020577:106449-106468 | Msa1383290:intron | 25.0% |
| !! | GTCAATTTTTCCAAATGAAT+TGG | + | tig0020577:106538-106557 | Msa1383290:intron | 25.0% |
| ! | CATTCTAGTACAAAAACTAT+TGG | + | tig0020577:106823-106842 | Msa1383290:intron | 25.0% |
| ! | AATACTCATTGCTATATCAA+AGG | - | tig0020577:106925-106944 | None:intergenic | 25.0% |
| ! | ATATCTTAGAACATGACAAT+AGG | - | tig0020577:106970-106989 | None:intergenic | 25.0% |
| ! | CAAGCTAGTAAATAAATATC+AGG | + | tig0020577:107011-107030 | Msa1383290:intron | 25.0% |
| ! | GAAAACCAGTTATTCAAAAA+AGG | + | tig0020577:107237-107256 | Msa1383290:intron | 25.0% |
| !!! | ACTATCCTTTTTTGAATAAC+TGG | - | tig0020577:107245-107264 | None:intergenic | 25.0% |
| ! | TGAATCATTTGCGTTAAAAA+TGG | + | tig0020577:107501-107520 | Msa1383290:intron | 25.0% |
| ! | TAAGCTAACTAATTGAGATT+TGG | - | tig0020577:107630-107649 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTCAAGAAAAAG+AGG | - | tig0020577:107833-107852 | None:intergenic | 25.0% |
| !! | AAAATGGGTGAATAATTTGT+TGG | + | tig0020577:108101-108120 | Msa1383290:CDS | 25.0% |
| AACTCAAAATCCAATTTCCA+CGG | + | tig0020577:100227-100246 | Msa1383290:CDS | 30.0% | |
| TCATCGCTTTGCAATAAAAT+TGG | + | tig0020577:100356-100375 | Msa1383290:CDS | 30.0% | |
| TACATGAGCATCAAGAAAAT+TGG | + | tig0020577:100447-100466 | Msa1383290:CDS | 30.0% | |
| ACATGAGCATCAAGAAAATT+GGG | + | tig0020577:100448-100467 | Msa1383290:CDS | 30.0% | |
| ! | AAATTGGGTGAATAACCTTT+TGG | + | tig0020577:100463-100482 | Msa1383290:CDS | 30.0% |
| TTCAATCCATCATAAGAAGA+AGG | + | tig0020577:100564-100583 | Msa1383290:intron | 30.0% | |
| TCAATCCATCATAAGAAGAA+GGG | + | tig0020577:100565-100584 | Msa1383290:intron | 30.0% | |
| TAATCAATGTCACTGTTTGA+TGG | - | tig0020577:100727-100746 | None:intergenic | 30.0% | |
| CTTATTACAAGATGTTGAAG+TGG | + | tig0020577:100748-100767 | Msa1383290:intron | 30.0% | |
| ACCAAGAATAGAAAAGTTGA+AGG | + | tig0020577:100947-100966 | Msa1383290:CDS | 30.0% | |
| GATATAGATACACTTGTACA+TGG | + | tig0020577:101132-101151 | Msa1383290:intron | 30.0% | |
| AAATAGCAGTGTTCAAACAA+AGG | - | tig0020577:101313-101332 | None:intergenic | 30.0% | |
| !!! | TATTTTGCTGTTGCTGAAAT+GGG | + | tig0020577:101328-101347 | Msa1383290:intron | 30.0% |
| TGGTGTAGGATTAGATTATA+AGG | - | tig0020577:101570-101589 | None:intergenic | 30.0% | |
| GGGAAAAATAAAAATGGTGT+AGG | - | tig0020577:101584-101603 | None:intergenic | 30.0% | |
| ! | AGGTGAATCATTTTCTATCA+TGG | + | tig0020577:101764-101783 | Msa1383290:intron | 30.0% |
| !!! | AATGGTGGTTTTAGAAATAG+GGG | + | tig0020577:101876-101895 | Msa1383290:intron | 30.0% |
| GCAAAAATATCGAAATCGTT+AGG | - | tig0020577:102140-102159 | None:intergenic | 30.0% | |
| !! | ATATTTTTGCCAATTGAGCT+AGG | + | tig0020577:102150-102169 | Msa1383290:intron | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | + | tig0020577:102637-102656 | Msa1383290:intron | 30.0% | |
| AGTCATTATTCCAGATCTAA+CGG | + | tig0020577:102843-102862 | Msa1383290:intron | 30.0% | |
| !!! | CTTTGTTTGTTTTAGCATGT+TGG | - | tig0020577:102915-102934 | None:intergenic | 30.0% |
| CATGCTAAAACAAACAAAGA+CGG | + | tig0020577:102916-102935 | Msa1383290:intron | 30.0% | |
| GAAAGGAACAATTCTAATGA+CGG | - | tig0020577:103121-103140 | None:intergenic | 30.0% | |
| AAAAAGGGAACACAAACATA+CGG | + | tig0020577:103306-103325 | Msa1383290:intron | 30.0% | |
| !! | TAGTTTGTTGATTCTGTACT+AGG | - | tig0020577:103423-103442 | None:intergenic | 30.0% |
| TAACTTAGCACTGTAATCAT+TGG | + | tig0020577:103648-103667 | Msa1383290:intron | 30.0% | |
| ! | ATAACTTGCATTGTGATCAT+TGG | + | tig0020577:103894-103913 | Msa1383290:intron | 30.0% |
| AGCACAAAATTGAAGACTTA+CGG | - | tig0020577:104016-104035 | None:intergenic | 30.0% | |
| ! | TTTCTTTCGATTTTGTTGAC+AGG | + | tig0020577:104171-104190 | Msa1383290:intron | 30.0% |
| AGTGTTAAATAAGAAGCAAC+CGG | + | tig0020577:104345-104364 | Msa1383290:intron | 30.0% | |
| ! | TCTTTTGTGGAATTTATTCC+CGG | - | tig0020577:104367-104386 | None:intergenic | 30.0% |
| ! | TTTTCTAACCTCATCTTTTG+TGG | - | tig0020577:104380-104399 | None:intergenic | 30.0% |
| ATCAATTTGAATTGCAGGAA+AGG | - | tig0020577:104462-104481 | None:intergenic | 30.0% | |
| TCAAAAGTGATACCAATAGT+TGG | - | tig0020577:104507-104526 | None:intergenic | 30.0% | |
| !!! | AAAGACAGGGTTAGTTTTTT+AGG | + | tig0020577:104868-104887 | Msa1383290:intron | 30.0% |
| TATGTCAAAATTCTGAATGG+TGG | - | tig0020577:105008-105027 | None:intergenic | 30.0% | |
| GATCAATCTTTCTTTACACA+TGG | + | tig0020577:105032-105051 | Msa1383290:intron | 30.0% | |
| ATGAAATCAGGATATGTATG+TGG | - | tig0020577:105446-105465 | None:intergenic | 30.0% | |
| GTTCATTTCTTGCATTTAGT+TGG | + | tig0020577:105752-105771 | Msa1383290:intron | 30.0% | |
| TTCAAAAATCAGGAAACATG+AGG | - | tig0020577:106070-106089 | None:intergenic | 30.0% | |
| !! | TGTTTTTGCTTGCCAAAAAT+GGG | + | tig0020577:106132-106151 | Msa1383290:intron | 30.0% |
| AATGTATGTCATTGTACCTT+AGG | + | tig0020577:106391-106410 | Msa1383290:intron | 30.0% | |
| ATGTATGTCATTGTACCTTA+GGG | + | tig0020577:106392-106411 | Msa1383290:intron | 30.0% | |
| ! | TGAAAAATAGCCATCAGTTT+TGG | - | tig0020577:106757-106776 | None:intergenic | 30.0% |
| !! | CATAAGGGATACGTTTTAAA+AGG | - | tig0020577:106849-106868 | None:intergenic | 30.0% |
| GATATAGCAATGAGTATTCA+TGG | + | tig0020577:106927-106946 | Msa1383290:intron | 30.0% | |
| ! | TTTTTATCATGTGACACTTG+AGG | + | tig0020577:107123-107142 | Msa1383290:intron | 30.0% |
| ! | TTTTATCATGTGACACTTGA+GGG | + | tig0020577:107124-107143 | Msa1383290:intron | 30.0% |
| !! | GTTTTCTTTGTTTCATGTGT+GGG | - | tig0020577:107223-107242 | None:intergenic | 30.0% |
| ATACAATTCTTGAAAGAGTG+TGG | - | tig0020577:107345-107364 | None:intergenic | 30.0% | |
| TAAGACAAAGTATGATGAGT+TGG | + | tig0020577:107551-107570 | Msa1383290:intron | 30.0% | |
| ATATATGAGAACATGCCAAT+TGG | + | tig0020577:107757-107776 | Msa1383290:intron | 30.0% | |
| AACATGCCAATTGGAAAATA+AGG | + | tig0020577:107766-107785 | Msa1383290:intron | 30.0% | |
| ATCCATACAAACTCAATTCA+AGG | + | tig0020577:107792-107811 | Msa1383290:intron | 30.0% | |
| TCTTCAATGCAATCAACATT+TGG | + | tig0020577:107936-107955 | Msa1383290:CDS | 30.0% | |
| AACATTTGGACACCTTATTA+AGG | + | tig0020577:107950-107969 | Msa1383290:CDS | 30.0% | |
| TTCATTGGAAGACCTTAATA+AGG | - | tig0020577:107965-107984 | None:intergenic | 30.0% | |
| TTCAATCCATCATAAGAAGA+AGG | + | tig0020577:100564-100583 | Msa1383290:intron | 30.0% | |
| TCAATCCATCATAAGAAGAA+GGG | + | tig0020577:100565-100584 | Msa1383290:intron | 30.0% | |
| AATTCTTGACACATCTAGAA+AGG | + | tig0020577:108259-108278 | Msa1383290:CDS | 30.0% | |
| CATTGCATTTAAGCATGAGT+GGG | - | tig0020577:100283-100302 | None:intergenic | 35.0% | |
| TCATTGCATTTAAGCATGAG+TGG | - | tig0020577:100284-100303 | None:intergenic | 35.0% | |
| GCTTAAATGCAATGAGCATT+TGG | + | tig0020577:100289-100308 | Msa1383290:CDS | 35.0% | |
| TTCAATTGAAGCCCTTAACA+AGG | - | tig0020577:100318-100337 | None:intergenic | 35.0% | |
| TTTATTGCAAAGCGATGATG+AGG | - | tig0020577:100354-100373 | None:intergenic | 35.0% | |
| TCGCTTTGCAATAAAATTGG+AGG | + | tig0020577:100359-100378 | Msa1383290:CDS | 35.0% | |
| TGCACACAAAAGAATGTACA+AGG | + | tig0020577:100537-100556 | Msa1383290:intron | 35.0% | |
| GCACACAAAAGAATGTACAA+GGG | + | tig0020577:100538-100557 | Msa1383290:intron | 35.0% | |
| CAATCCATCATAAGAAGAAG+GGG | + | tig0020577:100566-100585 | Msa1383290:intron | 35.0% | |
| TTTCAAATTTGCCAAGGCTT+TGG | - | tig0020577:100663-100682 | None:intergenic | 35.0% | |
| AAAGCCTTGGCAAATTTGAA+AGG | + | tig0020577:100662-100681 | Msa1383290:CDS | 35.0% | |
| ATTGCCTTTCAAATTTGCCA+AGG | - | tig0020577:100669-100688 | None:intergenic | 35.0% | |
| !!! | GCTGTTTGATTTTGACTGTA+TGG | - | tig0020577:100819-100838 | None:intergenic | 35.0% |
| TACAGTCAAAATCAAACAGC+TGG | + | tig0020577:100819-100838 | Msa1383290:intron | 35.0% | |
| ACAGTCAAAATCAAACAGCT+GGG | + | tig0020577:100820-100839 | Msa1383290:intron | 35.0% | |
| ! | TCTTTTGGGCTGAATAAGTA+TGG | - | tig0020577:100855-100874 | None:intergenic | 35.0% |
| ! | GCCTTCAACTTTTCTATTCT+TGG | - | tig0020577:100951-100970 | None:intergenic | 35.0% |
| ! | ATGATTCTGTTTTCTCCAAG+TGG | - | tig0020577:100991-101010 | None:intergenic | 35.0% |
| AAGGGCTTGAGTTTCTATTT+AGG | + | tig0020577:101029-101048 | Msa1383290:CDS | 35.0% | |
| TAACATCCTCAACCATTAGT+TGG | + | tig0020577:101081-101100 | Msa1383290:intron | 35.0% | |
| AACATCCTCAACCATTAGTT+GGG | + | tig0020577:101082-101101 | Msa1383290:intron | 35.0% | |
| ! | ACCATTAGTTGGGCTTTTAT+AGG | + | tig0020577:101092-101111 | Msa1383290:intron | 35.0% |
| ! | CCATTAGTTGGGCTTTTATA+GGG | + | tig0020577:101093-101112 | Msa1383290:intron | 35.0% |
| !!! | CTATTTTGCTGTTGCTGAAA+TGG | + | tig0020577:101327-101346 | Msa1383290:intron | 35.0% |
| TTAAATGTGCTCCAAAACGA+AGG | + | tig0020577:101351-101370 | Msa1383290:intron | 35.0% | |
| CAAGCATAATCGATGATCAA+TGG | + | tig0020577:101473-101492 | Msa1383290:intron | 35.0% | |
| GTCTAGATGATGCAACATTT+AGG | + | tig0020577:101511-101530 | Msa1383290:intron | 35.0% | |
| CTATATTGCACTACTTGAGT+GGG | - | tig0020577:101538-101557 | None:intergenic | 35.0% | |
| !! | TTATTTTTCCCCCAATTGGT+TGG | + | tig0020577:101593-101612 | Msa1383290:intron | 35.0% |
| AGCAAATGAAAGTCCAAAGA+AGG | + | tig0020577:101646-101665 | Msa1383290:intron | 35.0% | |
| AAATGAGACAAGGTAGAATC+TGG | - | tig0020577:101702-101721 | None:intergenic | 35.0% | |
| GGTGAAATTTAACATGGGAA+AGG | + | tig0020577:101744-101763 | Msa1383290:intron | 35.0% | |
| TAGAAATAGGGGGATCAAAA+TGG | + | tig0020577:101858-101877 | Msa1383290:intron | 35.0% | |
| AAATATCGAAATCGTTAGGC+CGG | - | tig0020577:102136-102155 | None:intergenic | 35.0% | |
| AGGTAAATTCCTAGCTCAAT+TGG | - | tig0020577:102162-102181 | None:intergenic | 35.0% | |
| ! | AGATCTGGAATAATGACTAG+AGG | - | tig0020577:102841-102860 | None:intergenic | 35.0% |
| !!! | GTTTGTTTTAGCATGTTGGT+AGG | - | tig0020577:102911-102930 | None:intergenic | 35.0% |
| !! | ATTTTGAGGAAACACTCGAA+AGG | + | tig0020577:103237-103256 | Msa1383290:intron | 35.0% |
| !! | CTAGGTTATAGTTTGTTGCT+CGG | - | tig0020577:103405-103424 | None:intergenic | 35.0% |
| TCCTACTGTGCAAAAGAAAA+TGG | + | tig0020577:103963-103982 | Msa1383290:intron | 35.0% | |
| TGACTGAGTTCATCTTGATT+AGG | + | tig0020577:104097-104116 | Msa1383290:intron | 35.0% | |
| CTTGTGTTCTTTCATCATCA+AGG | - | tig0020577:104231-104250 | None:intergenic | 35.0% | |
| GTGTTAAATAAGAAGCAACC+GGG | + | tig0020577:104346-104365 | Msa1383290:intron | 35.0% | |
| AGGAAAGGAAGAAAACTTGT+AGG | - | tig0020577:104447-104466 | None:intergenic | 35.0% | |
| GTGACATCAATTTGAATTGC+AGG | - | tig0020577:104467-104486 | None:intergenic | 35.0% | |
| TATTGTGCTTTGATGTGCTA+TGG | + | tig0020577:104778-104797 | Msa1383290:intron | 35.0% | |
| ! | TTGATGTGCTATGGATTACA+TGG | + | tig0020577:104787-104806 | Msa1383290:intron | 35.0% |
| ATCCACTTACAACAAAAGAC+AGG | + | tig0020577:104854-104873 | Msa1383290:intron | 35.0% | |
| TCCACTTACAACAAAAGACA+GGG | + | tig0020577:104855-104874 | Msa1383290:intron | 35.0% | |
| TAAATTTGTAGAGGAATGCG+AGG | + | tig0020577:104955-104974 | Msa1383290:intron | 35.0% | |
| ! | TACACATGGGATCACTATTT+TGG | + | tig0020577:105046-105065 | Msa1383290:intron | 35.0% |
| ! | ACACATGGGATCACTATTTT+GGG | + | tig0020577:105047-105066 | Msa1383290:intron | 35.0% |
| TCTAAATATTGATCCCACGT+AGG | - | tig0020577:105157-105176 | None:intergenic | 35.0% | |
| TGAAGTGCATTATTCATTGG+GGG | - | tig0020577:105235-105254 | None:intergenic | 35.0% | |
| CTGAAGTGCATTATTCATTG+GGG | - | tig0020577:105236-105255 | None:intergenic | 35.0% | |
| GCTGAAGTGCATTATTCATT+GGG | - | tig0020577:105237-105256 | None:intergenic | 35.0% | |
| AGCTGAAGTGCATTATTCAT+TGG | - | tig0020577:105238-105257 | None:intergenic | 35.0% | |
| TCAGCTTCAGCAAACAAATA+AGG | + | tig0020577:105252-105271 | Msa1383290:intron | 35.0% | |
| AAATCAGGATATGTATGTGG+TGG | - | tig0020577:105443-105462 | None:intergenic | 35.0% | |
| GAAGACATCATATCACACAT+CGG | - | tig0020577:105693-105712 | None:intergenic | 35.0% | |
| GATGTGTGATATGATGTCTT+CGG | + | tig0020577:105692-105711 | Msa1383290:intron | 35.0% | |
| ACTAAAGTCTTGGAATGTGA+TGG | - | tig0020577:105967-105986 | None:intergenic | 35.0% | |
| AAACTTGAGCACTAAAGTCT+TGG | - | tig0020577:105977-105996 | None:intergenic | 35.0% | |
| ACGAGTTAACCAAAGAACAA+TGG | + | tig0020577:106006-106025 | Msa1383290:intron | 35.0% | |
| TTTGGCAAGCAAAAACAGTT+GGG | - | tig0020577:106129-106148 | None:intergenic | 35.0% | |
| ! | TTTTGGCAAGCAAAAACAGT+TGG | - | tig0020577:106130-106149 | None:intergenic | 35.0% |
| !!! | CTGTTTTTGCTTGCCAAAAA+TGG | + | tig0020577:106131-106150 | Msa1383290:intron | 35.0% |
| ! | AGCTAGAATGTTCCCATTTT+TGG | - | tig0020577:106147-106166 | None:intergenic | 35.0% |
| GAAAATCTGTTCTCACAACT+TGG | - | tig0020577:106334-106353 | None:intergenic | 35.0% | |
| ! | GTGGACTAAAGCATTAGAAA+TGG | + | tig0020577:106414-106433 | Msa1383290:intron | 35.0% |
| GGTTAAAGTCGACGATAATT+AGG | + | tig0020577:106691-106710 | Msa1383290:intron | 35.0% | |
| !!! | ACTGATGGCTATTTTTCATG+TGG | + | tig0020577:106759-106778 | Msa1383290:intron | 35.0% |
| TTGTACTAGAATGTTCACAG+AGG | - | tig0020577:106816-106835 | None:intergenic | 35.0% | |
| GTGGAAGTCTATGATCATAA+GGG | - | tig0020577:106864-106883 | None:intergenic | 35.0% | |
| TGTGGAAGTCTATGATCATA+AGG | - | tig0020577:106865-106884 | None:intergenic | 35.0% | |
| TGCAGCTTATTATGATAGAG+TGG | - | tig0020577:106902-106921 | None:intergenic | 35.0% | |
| TTTATCATGTGACACTTGAG+GGG | + | tig0020577:107125-107144 | Msa1383290:intron | 35.0% | |
| !! | GGTTTTCTTTGTTTCATGTG+TGG | - | tig0020577:107224-107243 | None:intergenic | 35.0% |
| AAGATGTAATACGTGTGTAC+TGG | - | tig0020577:107322-107341 | None:intergenic | 35.0% | |
| ATTGTCATGTCTATCTATGG+AGG | - | tig0020577:107400-107419 | None:intergenic | 35.0% | |
| ACGATTGTCATGTCTATCTA+TGG | - | tig0020577:107403-107422 | None:intergenic | 35.0% | |
| !! | CGTGTGAATCAATGTTTTGA+TGG | - | tig0020577:107432-107451 | None:intergenic | 35.0% |
| GCATAATCATGCATGTAAGA+GGG | + | tig0020577:107523-107542 | Msa1383290:intron | 35.0% | |
| !!! | GATCTGCCTTATTTTCCAAT+TGG | - | tig0020577:107775-107794 | None:intergenic | 35.0% |
| AGCCTTGAATTGAGTTTGTA+TGG | - | tig0020577:107797-107816 | None:intergenic | 35.0% | |
| GATTGCATTGAAGAATGAGT+GGG | - | tig0020577:107930-107949 | None:intergenic | 35.0% | |
| TGATTGCATTGAAGAATGAG+TGG | - | tig0020577:107931-107950 | None:intergenic | 35.0% | |
| TCATTGCTTCACCATAAGAT+CGG | + | tig0020577:107994-108013 | Msa1383290:CDS | 35.0% | |
| AGTGGGAGCTGAATTAAATT+TGG | - | tig0020577:108048-108067 | None:intergenic | 35.0% | |
| TCCATGAGCATCAAGAAAAA+TGG | + | tig0020577:108085-108104 | Msa1383290:CDS | 35.0% | |
| CCATGAGCATCAAGAAAAAT+GGG | + | tig0020577:108086-108105 | Msa1383290:CDS | 35.0% | |
| !! | TGGGTGAATAATTTGTTGGA+TGG | + | tig0020577:108105-108124 | Msa1383290:CDS | 35.0% |
| ACACACATCTAAGAGTCTTA+AGG | - | tig0020577:108133-108152 | None:intergenic | 35.0% | |
| TTCACACAAAAGAATGCACA+AGG | + | tig0020577:108175-108194 | Msa1383290:CDS | 35.0% | |
| TCACACAAAAGAATGCACAA+GGG | + | tig0020577:108176-108195 | Msa1383290:CDS | 35.0% | |
| CAATCCATCATAAGAAGAAG+GGG | + | tig0020577:100566-100585 | Msa1383290:intron | 35.0% | |
| !!! | GGATTTTGAGTTCAAAGGAG+AGG | - | tig0020577:100219-100238 | None:intergenic | 40.0% |
| AGCATTTGGACACCTTGTTA+AGG | + | tig0020577:100303-100322 | Msa1383290:CDS | 40.0% | |
| GCATTTGGACACCTTGTTAA+GGG | + | tig0020577:100304-100323 | Msa1383290:CDS | 40.0% | |
| ! | TGGGTGAATAACCTTTTGGA+TGG | + | tig0020577:100467-100486 | Msa1383290:CDS | 40.0% |
| ! | ACCTTTTGGATGGATCGTTA+AGG | + | tig0020577:100477-100496 | Msa1383290:CDS | 40.0% |
| ! | TGTGTGCAGTAAAGCATCTT+TGG | - | tig0020577:100525-100544 | None:intergenic | 40.0% |
| ATCTCCCCTTCTTCTTATGA+TGG | - | tig0020577:100573-100592 | None:intergenic | 40.0% | |
| ATCATAAGAAGAAGGGGAGA+TGG | + | tig0020577:100572-100591 | Msa1383290:intron | 40.0% | |
| CAGTCAAAATCAAACAGCTG+GGG | + | tig0020577:100821-100840 | Msa1383290:intron | 40.0% | |
| GGGCTGAATAAGTATGGAAA+TGG | - | tig0020577:100849-100868 | None:intergenic | 40.0% | |
| ! | AGTGAGCAAGCAACTCTTTT+GGG | - | tig0020577:100869-100888 | None:intergenic | 40.0% |
| ! | TAGTGAGCAAGCAACTCTTT+TGG | - | tig0020577:100870-100889 | None:intergenic | 40.0% |
| ACTGCAATGCTACATCCAAT+TGG | - | tig0020577:100916-100935 | None:intergenic | 40.0% | |
| CAATGATCTGCAAAACCACT+TGG | + | tig0020577:100973-100992 | Msa1383290:CDS | 40.0% | |
| TGCATTCAAGACCTTGAAGA+AGG | + | tig0020577:101010-101029 | Msa1383290:CDS | 40.0% | |
| GCATTCAAGACCTTGAAGAA+GGG | + | tig0020577:101011-101030 | Msa1383290:CDS | 40.0% | |
| AAAAGCCCAACTAATGGTTG+AGG | - | tig0020577:101090-101109 | None:intergenic | 40.0% | |
| CCCTATAAAAGCCCAACTAA+TGG | - | tig0020577:101096-101115 | None:intergenic | 40.0% | |
| ACTTAAGCGGATATTGCAAC+GGG | - | tig0020577:101213-101232 | None:intergenic | 40.0% | |
| GACTTAAGCGGATATTGCAA+CGG | - | tig0020577:101214-101233 | None:intergenic | 40.0% | |
| ! | TTGGAGATAGTCCTTCGTTT+TGG | - | tig0020577:101365-101384 | None:intergenic | 40.0% |
| TCAATGGAGTGAATGTGCTT+AGG | + | tig0020577:101489-101508 | Msa1383290:intron | 40.0% | |
| CCTATATTGCACTACTTGAG+TGG | - | tig0020577:101539-101558 | None:intergenic | 40.0% | |
| CCACTCAAGTAGTGCAATAT+AGG | + | tig0020577:101536-101555 | Msa1383290:intron | 40.0% | |
| TATTGATGCCAACCAATTGG+GGG | - | tig0020577:101604-101623 | None:intergenic | 40.0% | |
| CTATTGATGCCAACCAATTG+GGG | - | tig0020577:101605-101624 | None:intergenic | 40.0% | |
| GCTATTGATGCCAACCAATT+GGG | - | tig0020577:101606-101625 | None:intergenic | 40.0% | |
| TGCTATTGATGCCAACCAAT+TGG | - | tig0020577:101607-101626 | None:intergenic | 40.0% | |
| AAATAGGGGGATCAAAATGG+TGG | + | tig0020577:101861-101880 | Msa1383290:intron | 40.0% | |
| ATGGTTCGAACTCCTAGTTA+CGG | + | tig0020577:102107-102126 | Msa1383290:intron | 40.0% | |
| GCTAAAACAAACAAAGACGG+TGG | + | tig0020577:102919-102938 | Msa1383290:intron | 40.0% | |
| CGGTGGAGAGAATTAAAAGT+CGG | + | tig0020577:102936-102955 | Msa1383290:intron | 40.0% | |
| GGTGGAGAGAATTAAAAGTC+GGG | + | tig0020577:102937-102956 | Msa1383290:intron | 40.0% | |
| !! | TTAGGGCAAGATTTGTTGTC+GGG | - | tig0020577:103147-103166 | None:intergenic | 40.0% |
| !! | GTTAGGGCAAGATTTGTTGT+CGG | - | tig0020577:103148-103167 | None:intergenic | 40.0% |
| TATTGGCACGGAAACTGTTA+GGG | - | tig0020577:103164-103183 | None:intergenic | 40.0% | |
| ! | TGTCTGTCATTGTATTGGCA+CGG | - | tig0020577:103176-103195 | None:intergenic | 40.0% |
| CTCTGTGTCTGTCATTGTAT+TGG | - | tig0020577:103181-103200 | None:intergenic | 40.0% | |
| TACAATGACAGACACAGAGT+CGG | + | tig0020577:103182-103201 | Msa1383290:intron | 40.0% | |
| TGTTTCCTCAAAATGTGAGG+TGG | - | tig0020577:103231-103250 | None:intergenic | 40.0% | |
| GAGTGTTTCCTCAAAATGTG+AGG | - | tig0020577:103234-103253 | None:intergenic | 40.0% | |
| ! | TCTTTTGCACAGTAGGAAGA+AGG | - | tig0020577:103960-103979 | None:intergenic | 40.0% |
| !! | GCCATTTTCTTTTGCACAGT+AGG | - | tig0020577:103967-103986 | None:intergenic | 40.0% |
| ACCAGTTACCTTATCCAACT+AGG | + | tig0020577:104594-104613 | Msa1383290:intron | 40.0% | |
| ACCTAGTTGGATAAGGTAAC+TGG | - | tig0020577:104598-104617 | None:intergenic | 40.0% | |
| AGTTACCTTATCCAACTAGG+TGG | + | tig0020577:104597-104616 | Msa1383290:intron | 40.0% | |
| !! | ACCCTGTCTTTTGTTGTAAG+TGG | - | tig0020577:104859-104878 | None:intergenic | 40.0% |
| CGCATATAAGAATAAGCGCT+AGG | - | tig0020577:104934-104953 | None:intergenic | 40.0% | |
| ! | GGACTGGTGAATAGCATAAA+AGG | - | tig0020577:104987-105006 | None:intergenic | 40.0% |
| !! | CAAAATTCTGAATGGTGGAC+TGG | - | tig0020577:105003-105022 | None:intergenic | 40.0% |
| ! | CACATGGGATCACTATTTTG+GGG | + | tig0020577:105048-105067 | Msa1383290:intron | 40.0% |
| GTTCATCCATATGCTGAAGT+TGG | + | tig0020577:105079-105098 | Msa1383290:intron | 40.0% | |
| AGGCCAGATAGATGTGTTTA+CGG | - | tig0020577:105137-105156 | None:intergenic | 40.0% | |
| AGGTGTTAATCCACATACTG+CGG | + | tig0020577:105183-105202 | Msa1383290:intron | 40.0% | |
| AGATGACTCAAGTGATTCTG+AGG | + | tig0020577:105378-105397 | Msa1383290:intron | 40.0% | |
| TGAGGTGAGAATACTGAAAC+TGG | + | tig0020577:105396-105415 | Msa1383290:intron | 40.0% | |
| CAATTGACGAACATTGCATC+AGG | - | tig0020577:105587-105606 | None:intergenic | 40.0% | |
| GATGTCTTCGGACAATGATA+TGG | + | tig0020577:105704-105723 | Msa1383290:intron | 40.0% | |
| AAATCAGGTGGTCAAACAGT+AGG | - | tig0020577:105944-105963 | None:intergenic | 40.0% | |
| ! | CTTGGAATGTGATGGAAATC+AGG | - | tig0020577:105959-105978 | None:intergenic | 40.0% |
| TCAGTGACACCATTGTTCTT+TGG | - | tig0020577:106018-106037 | None:intergenic | 40.0% | |
| CATGAGGAGACTAGTACATA+AGG | - | tig0020577:106054-106073 | None:intergenic | 40.0% | |
| GTTCGAGTGGTTCAAAAATC+AGG | - | tig0020577:106080-106099 | None:intergenic | 40.0% | |
| GAACAATGACCGTGTACTTA+AGG | + | tig0020577:106096-106115 | Msa1383290:intron | 40.0% | |
| TTGGCAAGCAAAAACAGTTG+GGG | - | tig0020577:106128-106147 | None:intergenic | 40.0% | |
| AATCTGTTCTCACAACTTGG+AGG | - | tig0020577:106331-106350 | None:intergenic | 40.0% | |
| TATGTCATTGTACCTTAGGG+TGG | + | tig0020577:106395-106414 | Msa1383290:intron | 40.0% | |
| TAATGCTTTAGTCCACCCTA+AGG | - | tig0020577:106410-106429 | None:intergenic | 40.0% | |
| TACACTAGTTAGCATCTGCA+TGG | - | tig0020577:106586-106605 | None:intergenic | 40.0% | |
| ATGCAGATGCTAACTAGTGT+AGG | + | tig0020577:106585-106604 | Msa1383290:intron | 40.0% | |
| !! | GATGTTGATAGCGTAGATAG+AGG | - | tig0020577:106660-106679 | None:intergenic | 40.0% |
| TATCAACATCGACCTCAAGT+TGG | + | tig0020577:106670-106689 | Msa1383290:intron | 40.0% | |
| ! | TCAGTTTTCGCCATTAAGCA+AGG | + | tig0020577:106723-106742 | Msa1383290:intron | 40.0% |
| ! | CAGTTTTCGCCATTAAGCAA+GGG | + | tig0020577:106724-106743 | Msa1383290:intron | 40.0% |
| ATGATAGAGTGGTGTTTGAG+TGG | - | tig0020577:106891-106910 | None:intergenic | 40.0% | |
| GGCATAATCATGCATGTAAG+AGG | + | tig0020577:107522-107541 | Msa1383290:intron | 40.0% | |
| CAATGATGAGGAGGTTTCAT+TGG | - | tig0020577:107980-107999 | None:intergenic | 40.0% | |
| CTTATGGTGAAGCAATGATG+AGG | - | tig0020577:107992-108011 | None:intergenic | 40.0% | |
| TTCTTGATGCTCATGGACAA+GGG | - | tig0020577:108082-108101 | None:intergenic | 40.0% | |
| TTTCTTGATGCTCATGGACA+AGG | - | tig0020577:108083-108102 | None:intergenic | 40.0% | |
| !! | CCCATTTTTCTTGATGCTCA+TGG | - | tig0020577:108089-108108 | None:intergenic | 40.0% |
| TCTTGACACATCTAGAAAGG+TGG | + | tig0020577:108262-108281 | Msa1383290:CDS | 40.0% | |
| CATTTAAGCATGAGTGGGTG+TGG | - | tig0020577:100278-100297 | None:intergenic | 45.0% | |
| ATTGCAAAGCGATGATGAGG+AGG | - | tig0020577:100351-100370 | None:intergenic | 45.0% | |
| ! | AGAAGTGCATCTTGAGTGAG+TGG | - | tig0020577:100428-100447 | None:intergenic | 45.0% |
| GCCTTAACGATCCATCCAAA+AGG | - | tig0020577:100481-100500 | None:intergenic | 45.0% | |
| AAGAAGAAGGGGAGATGGAT+TGG | + | tig0020577:100577-100596 | Msa1383290:intron | 45.0% | |
| !! | ATTTGCCAAGGCTTTGGAGA+TGG | - | tig0020577:100657-100676 | None:intergenic | 45.0% |
| GAAACTCAAGCCCTTCTTCA+AGG | - | tig0020577:101024-101043 | None:intergenic | 45.0% | |
| TTGAATCTTGCCCACACAAC+TGG | + | tig0020577:102077-102096 | Msa1383290:intron | 45.0% | |
| GGATGGACCAAAAGTGAAGA+TGG | - | tig0020577:102324-102343 | None:intergenic | 45.0% | |
| AACGGTGTCTCGTGATATCT+TGG | + | tig0020577:102861-102880 | Msa1383290:intron | 45.0% | |
| GTGTCTCGTGATATCTTGGA+TGG | + | tig0020577:102865-102884 | Msa1383290:intron | 45.0% | |
| TCTCGTGATATCTTGGATGG+AGG | + | tig0020577:102868-102887 | Msa1383290:intron | 45.0% | |
| CTCGTGATATCTTGGATGGA+GGG | + | tig0020577:102869-102888 | Msa1383290:intron | 45.0% | |
| !! | GATTTGTTGTCGGGAAGGAA+AGG | - | tig0020577:103138-103157 | None:intergenic | 45.0% |
| ! | GTATTGGCACGGAAACTGTT+AGG | - | tig0020577:103165-103184 | None:intergenic | 45.0% |
| TCAAAATGTGAGGTGGAGTC+GGG | - | tig0020577:103224-103243 | None:intergenic | 45.0% | |
| CTCAAAATGTGAGGTGGAGT+CGG | - | tig0020577:103225-103244 | None:intergenic | 45.0% | |
| ACACTCGAAAGGAAACTCTC+AGG | + | tig0020577:103248-103267 | Msa1383290:intron | 45.0% | |
| TCCTCCTGTGCAAGAGAAAA+TGG | + | tig0020577:103709-103728 | Msa1383290:intron | 45.0% | |
| !!! | GTTGCCATTTTCTCTTGCAC+AGG | - | tig0020577:103716-103735 | None:intergenic | 45.0% |
| AGTCCTTGCACATGGTTGAA+GGG | - | tig0020577:104205-104224 | None:intergenic | 45.0% | |
| CATCCATATGCTGAAGTTGG+TGG | + | tig0020577:105082-105101 | Msa1383290:intron | 45.0% | |
| TCACCACCAACTTCAGCATA+TGG | - | tig0020577:105088-105107 | None:intergenic | 45.0% | |
| ! | TGATCACTGGCTATCTCAAG+CGG | - | tig0020577:105112-105131 | None:intergenic | 45.0% |
| ACCCCGTAAACACATCTATC+TGG | + | tig0020577:105131-105150 | Msa1383290:intron | 45.0% | |
| GCCAGATAGATGTGTTTACG+GGG | - | tig0020577:105135-105154 | None:intergenic | 45.0% | |
| GGCCAGATAGATGTGTTTAC+GGG | - | tig0020577:105136-105155 | None:intergenic | 45.0% | |
| ATTGGGGGATCATTCACAAG+TGG | - | tig0020577:105220-105239 | None:intergenic | 45.0% | |
| TCAGGACAGAGAACTTGGAA+TGG | - | tig0020577:105569-105588 | None:intergenic | 45.0% | |
| TTGCATCAGGACAGAGAACT+TGG | - | tig0020577:105574-105593 | None:intergenic | 45.0% | |
| TGTTGCATGCATGCATGCTT+TGG | + | tig0020577:105876-105895 | Msa1383290:intron | 45.0% | |
| ! | GGAATGTGATGGAAATCAGG+TGG | - | tig0020577:105956-105975 | None:intergenic | 45.0% |
| GGGGTAAGTCCTTAAGTACA+CGG | - | tig0020577:106108-106127 | None:intergenic | 45.0% | |
| TGGCAAGCAAAAACAGTTGG+GGG | - | tig0020577:106127-106146 | None:intergenic | 45.0% | |
| !! | CGTCGACTTTAACCAACTTG+AGG | - | tig0020577:106685-106704 | None:intergenic | 45.0% |
| GTCGACGATAATTAGGCAGT+TGG | + | tig0020577:106698-106717 | Msa1383290:intron | 45.0% | |
| ! | CTTTGTTTCATGTGTGGGCT+TGG | - | tig0020577:107218-107237 | None:intergenic | 45.0% |
| ! | TGAGTTGGAGAGTTTCCATG+AGG | + | tig0020577:107566-107585 | Msa1383290:intron | 45.0% |
| GAGTTGGAGAGTTTCCATGA+GGG | + | tig0020577:107567-107586 | Msa1383290:intron | 45.0% | |
| !! | TTAGAGAAGTGTCTCCCTCA+TGG | - | tig0020577:107584-107603 | None:intergenic | 45.0% |
| CATTGAAGAATGAGTGGGTG+TGG | - | tig0020577:107925-107944 | None:intergenic | 45.0% | |
| ATGGTGAAGCAATGATGAGG+AGG | - | tig0020577:107989-108008 | None:intergenic | 45.0% | |
| TTGCTTCACCATAAGATCGG+AGG | + | tig0020577:107997-108016 | Msa1383290:CDS | 45.0% | |
| TCCATCATAAGAAGAAGGGG+AGG | + | tig0020577:100569-100588 | Msa1383290:intron | 45.0% | |
| ACCTCCCCTTCTTCTTATGA+TGG | - | tig0020577:108211-108230 | None:intergenic | 45.0% | |
| ATCATAAGAAGAAGGGGAGG+TGG | + | tig0020577:108210-108229 | Msa1383290:CDS | 45.0% | |
| !!! | AAAAAAATCTATTTTTTTTT+GGG | - | tig0020577:102426-102445 | None:intergenic | 5.0% |
| !!! | TAAAAAAATCTATTTTTTTT+TGG | - | tig0020577:102427-102446 | None:intergenic | 5.0% |
| !!! | ATAAATTTTTATATTCTTTA+AGG | + | tig0020577:102465-102484 | Msa1383290:intron | 5.0% |
| !! | TAATAAACAAAATAAAATAT+AGG | - | tig0020577:102770-102789 | None:intergenic | 5.0% |
| !!! | ATTATAATTATTTTTTCTTA+TGG | - | tig0020577:103093-103112 | None:intergenic | 5.0% |
| !!! | TTAATTTTAAAAGTAATATT+TGG | + | tig0020577:105285-105304 | Msa1383290:intron | 5.0% |
| !!! | TAATTTTAAAAGTAATATTT+GGG | + | tig0020577:105286-105305 | Msa1383290:intron | 5.0% |
| GATTGAGCGACCGTGGAAAT+TGG | - | tig0020577:100240-100259 | None:intergenic | 50.0% | |
| ATGAGTGGGTGTGGTCTAGA+TGG | - | tig0020577:100269-100288 | None:intergenic | 50.0% | |
| AAGCGATGATGAGGAGGAAG+AGG | - | tig0020577:100345-100364 | None:intergenic | 50.0% | |
| AAAGGCCATCTCCAAAGCCT+TGG | + | tig0020577:100649-100668 | Msa1383290:CDS | 50.0% | |
| AATCTTGCCCACACAACTGG+AGG | + | tig0020577:102080-102099 | Msa1383290:intron | 50.0% | |
| ATCTTGCCCACACAACTGGA+GGG | + | tig0020577:102081-102100 | Msa1383290:intron | 50.0% | |
| GAACTCCTAGTTACGGCATC+CGG | + | tig0020577:102114-102133 | Msa1383290:intron | 50.0% | |
| TCACGAGACACCGTTAGATC+TGG | - | tig0020577:102856-102875 | None:intergenic | 50.0% | |
| !! | GGCAAGATTTGTTGTCGGGA+AGG | - | tig0020577:103143-103162 | None:intergenic | 50.0% |
| ! | CGACTCCACCTCACATTTTG+AGG | + | tig0020577:103223-103242 | Msa1383290:intron | 50.0% |
| TCTCTTGCACAGGAGGAAGA+AGG | - | tig0020577:103706-103725 | None:intergenic | 50.0% | |
| !! | GCCATTTTCTCTTGCACAGG+AGG | - | tig0020577:103713-103732 | None:intergenic | 50.0% |
| CAGTCCTTGCACATGGTTGA+AGG | - | tig0020577:104206-104225 | None:intergenic | 50.0% | |
| CAAGGTTCAGTCCTTGCACA+TGG | - | tig0020577:104213-104232 | None:intergenic | 50.0% | |
| CTGCTCCACCTAGTTGGATA+AGG | - | tig0020577:104605-104624 | None:intergenic | 50.0% | |
| TATCCAACTAGGTGGAGCAG+TGG | + | tig0020577:104605-104624 | Msa1383290:intron | 50.0% | |
| TTGTAGAGGAATGCGAGGAG+AGG | + | tig0020577:104960-104979 | Msa1383290:intron | 50.0% | |
| TGTGTTTACGGGGTGATCAC+TGG | - | tig0020577:105125-105144 | None:intergenic | 50.0% | |
| ACACATCTATCTGGCCTACG+TGG | + | tig0020577:105140-105159 | Msa1383290:intron | 50.0% | |
| CACATCTATCTGGCCTACGT+GGG | + | tig0020577:105141-105160 | Msa1383290:intron | 50.0% | |
| GTACACGGTCATTGTTCGAG+TGG | - | tig0020577:106093-106112 | None:intergenic | 50.0% | |
| GTGGTGTTTGAGTGGAACTG+TGG | - | tig0020577:106883-106902 | None:intergenic | 50.0% | |
| GCAAACTGTTTGAGCGACCA+TGG | - | tig0020577:107894-107913 | None:intergenic | 50.0% | |
| ATGAGTGGGTGTGGTCTAGA+GGG | - | tig0020577:100269-100288 | None:intergenic | 50.0% | |
| AATGAGTGGGTGTGGTCTAG+AGG | - | tig0020577:107917-107936 | None:intergenic | 50.0% | |
| !! | CAAGGGCATCTTGAGTGAGT+GGG | - | tig0020577:108065-108084 | None:intergenic | 50.0% |
| !! | ACAAGGGCATCTTGAGTGAG+TGG | - | tig0020577:108066-108085 | None:intergenic | 50.0% |
| AAGAAGAAGGGGAGGTGGAT+TGG | + | tig0020577:108215-108234 | Msa1383290:CDS | 50.0% | |
| ! | TGGATTGGAGCTCACAGTTG+AGG | + | tig0020577:108230-108249 | Msa1383290:CDS | 50.0% |
| CGATGATGAGGAGGAAGAGG+TGG | - | tig0020577:100342-100361 | None:intergenic | 55.0% | |
| ! | TGGATTGGAGCTCACTGCAG+AGG | + | tig0020577:100592-100611 | Msa1383290:intron | 55.0% |
| TCTTGCCCACACAACTGGAG+GGG | + | tig0020577:102082-102101 | Msa1383290:intron | 55.0% | |
| CATAGCCCCTCCAGTTGTGT+GGG | - | tig0020577:102090-102109 | None:intergenic | 55.0% | |
| TTAGGCCGGATGCCGTAACT+AGG | - | tig0020577:102122-102141 | None:intergenic | 55.0% | |
| CCTTGCACATGGTTGAAGGG+TGG | - | tig0020577:104202-104221 | None:intergenic | 55.0% | |
| CCACCCTTCAACCATGTGCA+AGG | + | tig0020577:104199-104218 | Msa1383290:intron | 55.0% | |
| TAGCCACTGCTCCACCTAGT+TGG | - | tig0020577:104611-104630 | None:intergenic | 55.0% | |
| CACGCTGCACAAAGTGAGCA+TGG | - | tig0020577:105339-105358 | None:intergenic | 55.0% | |
| !! | CGCCATTAAGCAAGGGCATC+TGG | + | tig0020577:106731-106750 | Msa1383290:intron | 55.0% |
| GGCCAGATGCCCTTGCTTAA+TGG | - | tig0020577:106736-106755 | None:intergenic | 55.0% | |
| GGGCATCTGGCCAAAACTGA+TGG | + | tig0020577:106744-106763 | Msa1383290:intron | 55.0% | |
| CTCGCAAGCCTCCGATCTTA+TGG | - | tig0020577:108008-108027 | None:intergenic | 55.0% | |
| GATCGGAGGCTTGCGAGATT+TGG | + | tig0020577:108011-108030 | Msa1383290:CDS | 55.0% | |
| GCAAGCTGATTGAGCGACCG+TGG | - | tig0020577:100247-100266 | None:intergenic | 60.0% | |
| CCATAGCCCCTCCAGTTGTG+TGG | - | tig0020577:102091-102110 | None:intergenic | 60.0% | |
| CCACACAACTGGAGGGGCTA+TGG | + | tig0020577:102088-102107 | Msa1383290:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020577 | gene | 100209 | 108287 | 100209 | ID=Msa1383290;Name=Msa1383290 |
| tig0020577 | mRNA | 100209 | 108287 | 100209 | ID=Msa1383290-mRNA-1;Parent=Msa1383290;Name=Msa1383290-mRNA-1;_AED=0.35;_eAED=0.36;_QI=0|0|0|1|0|0|5|0|364 |
| tig0020577 | exon | 100209 | 100403 | 100209 | ID=Msa1383290-mRNA-1:exon:8511;Parent=Msa1383290-mRNA-1 |
| tig0020577 | exon | 100422 | 100508 | 100422 | ID=Msa1383290-mRNA-1:exon:8512;Parent=Msa1383290-mRNA-1 |
| tig0020577 | exon | 100641 | 100766 | 100641 | ID=Msa1383290-mRNA-1:exon:8513;Parent=Msa1383290-mRNA-1 |
| tig0020577 | exon | 100824 | 101071 | 100824 | ID=Msa1383290-mRNA-1:exon:8514;Parent=Msa1383290-mRNA-1 |
| tig0020577 | exon | 107849 | 108287 | 107849 | ID=Msa1383290-mRNA-1:exon:8515;Parent=Msa1383290-mRNA-1 |
| tig0020577 | CDS | 100209 | 100403 | 100209 | ID=Msa1383290-mRNA-1:cds;Parent=Msa1383290-mRNA-1 |
| tig0020577 | CDS | 100422 | 100508 | 100422 | ID=Msa1383290-mRNA-1:cds;Parent=Msa1383290-mRNA-1 |
| tig0020577 | CDS | 100641 | 100766 | 100641 | ID=Msa1383290-mRNA-1:cds;Parent=Msa1383290-mRNA-1 |
| tig0020577 | CDS | 100824 | 101071 | 100824 | ID=Msa1383290-mRNA-1:cds;Parent=Msa1383290-mRNA-1 |
| tig0020577 | CDS | 107849 | 108287 | 107849 | ID=Msa1383290-mRNA-1:cds;Parent=Msa1383290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
