Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384950 | XP_039687658.1 | 69.427 | 157 | 32 | 3 | 145 | 295 | 16 | 162 | 4.74e-68 | 219 |
| Msa1384950 | XP_039687658.1 | 87.671 | 146 | 12 | 2 | 10 | 150 | 3 | 147 | 1.37e-82 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384950 | sp|Q9CQR4|ACO13_MOUSE | 32.886 | 149 | 77 | 5 | 150 | 291 | 6 | 138 | 7.18e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384950 | A0A1R3J6G4 | 47.440 | 293 | 106 | 7 | 39 | 295 | 20 | 300 | 4.52e-76 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092410 | Msa1384950 | 0.801704 | 7.942740e-49 | -8.615850e-47 |
| Msa0152560 | Msa1384950 | 0.810706 | 1.008718e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384950 | MtrunA17_Chr3g0131231 | 83.846 | 130 | 9 | 2 | 21 | 150 | 1 | 118 | 4.24e-70 | 213 |
| Msa1384950 | MtrunA17_Chr3g0131231 | 63.816 | 152 | 33 | 3 | 145 | 295 | 3 | 133 | 4.54e-60 | 187 |
| Msa1384950 | MtrunA17_Chr3g0131241 | 70.946 | 148 | 28 | 2 | 151 | 293 | 19 | 156 | 1.32e-68 | 210 |
| Msa1384950 | MtrunA17_Chr3g0131241 | 71.329 | 143 | 28 | 2 | 21 | 150 | 1 | 143 | 2.24e-65 | 202 |
| Msa1384950 | MtrunA17_Chr3g0131251 | 68.000 | 150 | 33 | 2 | 151 | 295 | 19 | 158 | 1.19e-65 | 202 |
| Msa1384950 | MtrunA17_Chr3g0131251 | 74.016 | 127 | 26 | 2 | 29 | 150 | 19 | 143 | 5.96e-59 | 186 |
| Msa1384950 | MtrunA17_Chr3g0131211 | 64.596 | 161 | 40 | 3 | 140 | 295 | 13 | 161 | 6.71e-65 | 201 |
| Msa1384950 | MtrunA17_Chr3g0131211 | 70.866 | 127 | 32 | 1 | 29 | 150 | 20 | 146 | 9.53e-62 | 193 |
| Msa1384950 | MtrunA17_Chr3g0131201 | 58.170 | 153 | 41 | 4 | 13 | 150 | 35 | 179 | 1.47e-52 | 171 |
| Msa1384950 | MtrunA17_Chr3g0131201 | 53.293 | 167 | 54 | 5 | 131 | 291 | 42 | 190 | 6.69e-48 | 158 |
| Msa1384950 | MtrunA17_Chr3g0131191 | 53.125 | 160 | 59 | 3 | 139 | 292 | 1 | 150 | 5.23e-49 | 160 |
| Msa1384950 | MtrunA17_Chr3g0131191 | 57.812 | 128 | 48 | 2 | 29 | 150 | 11 | 138 | 4.02e-44 | 147 |
| Msa1384950 | MtrunA17_Chr3g0131261 | 64.948 | 97 | 29 | 1 | 29 | 120 | 15 | 111 | 4.85e-41 | 139 |
| Msa1384950 | MtrunA17_Chr3g0131261 | 62.745 | 102 | 31 | 2 | 146 | 240 | 10 | 111 | 5.61e-36 | 126 |
| Msa1384950 | MtrunA17_Chr3g0131221 | 72.222 | 54 | 5 | 1 | 241 | 294 | 48 | 91 | 7.29e-18 | 77.0 |
| Msa1384950 | MtrunA17_Chr5g0429471 | 31.481 | 162 | 85 | 5 | 142 | 290 | 6 | 154 | 1.94e-15 | 72.4 |
| Msa1384950 | MtrunA17_Chr5g0429471 | 36.364 | 110 | 63 | 2 | 46 | 150 | 37 | 144 | 3.29e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384950 | AT1G04290.1 | 50.980 | 153 | 58 | 4 | 144 | 290 | 7 | 148 | 8.78e-41 | 139 |
| Msa1384950 | AT1G04290.1 | 55.118 | 127 | 51 | 2 | 29 | 150 | 13 | 138 | 1.11e-39 | 136 |
| Msa1384950 | AT1G04290.2 | 49.485 | 97 | 43 | 2 | 29 | 120 | 13 | 108 | 3.10e-23 | 92.8 |
| Msa1384950 | AT1G04290.2 | 46.602 | 103 | 48 | 3 | 144 | 240 | 7 | 108 | 1.87e-20 | 85.5 |
| Msa1384950 | AT2G29590.1 | 34.507 | 142 | 69 | 5 | 159 | 290 | 24 | 151 | 7.71e-15 | 71.2 |
Find 56 sgRNAs with CRISPR-Local
Find 775 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGATAAAGGGAATATATT+TGG | 0.183692 | tig0020683:+119102 | None:intergenic |
| GCTGGATTTCCGTGGAATTC+TGG | 0.244104 | tig0020683:-128799 | Msa1384950:CDS |
| CAATTATAAGCGTGGAGTTC+AGG | 0.324288 | tig0020683:-119165 | Msa1384950:CDS |
| CTGTTGTAAGCGTGGAGTTC+AGG | 0.335840 | tig0020683:-128678 | Msa1384950:CDS |
| ACTACTTTGGTGGATGTGAT+AGG | 0.419520 | tig0020683:-126337 | Msa1384950:CDS |
| CGCTGGATTTCCGTGGGAGT+CGG | 0.419546 | tig0020683:-126296 | Msa1384950:CDS |
| GCAGCCGCAATTCCAGCAGC+TGG | 0.448321 | tig0020683:-128817 | Msa1384950:CDS |
| GCAGCCGCAATTCCCGCCGC+TGG | 0.458488 | tig0020683:-126313 | Msa1384950:CDS |
| GCTGGATTTCCGTGGGAGTC+GGG | 0.459981 | tig0020683:-126295 | Msa1384950:CDS |
| GCATGAAATATTGATCTCAA+TGG | 0.461406 | tig0020683:+128771 | None:intergenic |
| AACCTTGCGTGGCCTACGAT+TGG | 0.486916 | tig0020683:-129026 | Msa1384950:CDS |
| ACAGAAGCATCAACGGAGAA+AGG | 0.494655 | tig0020683:-129106 | Msa1384950:CDS |
| AGAGATCAATGCCTCATGCT+TGG | 0.500461 | tig0020683:-126263 | Msa1384950:CDS |
| TTCCCGCCGCTGGATTTCCG+TGG | 0.508980 | tig0020683:-126303 | Msa1384950:CDS |
| AGCAGCATCGTCAATGGTAG+AGG | 0.509056 | tig0020683:-129080 | Msa1384950:CDS |
| TTCCACGGAAATCCAGCTGC+TGG | 0.509333 | tig0020683:+128805 | None:intergenic |
| AGGAGAAGCAGCATCGTCAA+TGG | 0.514265 | tig0020683:-129086 | Msa1384950:CDS |
| AATCTTGCGTGGCCTACGAT+TGG | 0.517106 | tig0020683:-126543 | Msa1384950:CDS |
| TCCCGCCGCTGGATTTCCGT+GGG | 0.531634 | tig0020683:-126302 | Msa1384950:CDS |
| TGGTGCTATCACTACTTTGG+TGG | 0.532173 | tig0020683:-126347 | Msa1384950:CDS |
| TCCCACGGAAATCCAGCGGC+GGG | 0.541204 | tig0020683:+126301 | None:intergenic |
| ATGCTAGAGTTCTACGAGTA+GGG | 0.541999 | tig0020683:-119228 | Msa1384950:CDS |
| CGATTGGATCTCATTGAACC+TGG | 0.547930 | tig0020683:-129010 | Msa1384950:CDS |
| GGTAGAGGATGAATTGCCTC+AGG | 0.568322 | tig0020683:-129065 | Msa1384950:CDS |
| TTGGAACATCTAACCTTGCG+TGG | 0.572253 | tig0020683:-129037 | Msa1384950:CDS |
| CGGTGGTGCTATCACTACTT+TGG | 0.572426 | tig0020683:-126350 | Msa1384950:CDS |
| AAATCCAGCGGCGGGAATTG+CGG | 0.573545 | tig0020683:+126309 | None:intergenic |
| GCATGAGGCATTGATCTCTA+CGG | 0.574279 | tig0020683:+126267 | None:intergenic |
| GATGCTAGAGTTCTACGAGT+AGG | 0.576197 | tig0020683:-119229 | Msa1384950:CDS |
| GGCTGTAGCTGTTGTAAGCG+TGG | 0.577050 | tig0020683:-128686 | Msa1384950:CDS |
| CGATTGGATCTCATTCAGCC+TGG | 0.577660 | tig0020683:-126527 | Msa1384950:CDS |
| TTCTTAGATCTAATCTTGCG+TGG | 0.578034 | tig0020683:-126554 | Msa1384950:CDS |
| CGGTGGTGCTATCACTACTC+TGG | 0.582009 | tig0020683:-128854 | Msa1384950:CDS |
| ATTGAGAAGACGACACGACC+AGG | 0.583796 | tig0020683:+128992 | None:intergenic |
| TTCCAGCAGCTGGATTTCCG+TGG | 0.587898 | tig0020683:-128807 | Msa1384950:CDS |
| ATCCAATCGTAGGCCACGCA+AGG | 0.595930 | tig0020683:+129024 | None:intergenic |
| TGGTGCTATCACTACTCTGG+TGG | 0.598552 | tig0020683:-128851 | Msa1384950:CDS |
| ATAAATACGAACATTGACAT+AGG | 0.602776 | tig0020683:+126234 | None:intergenic |
| GGCTATGGCTGTTATAAGCG+TGG | 0.603087 | tig0020683:-119203 | Msa1384950:CDS |
| ACGGAAACTCCCGACTCCCA+CGG | 0.604979 | tig0020683:+126286 | None:intergenic |
| CTCCCACGGAAATCCAGCGG+CGG | 0.613353 | tig0020683:+126300 | None:intergenic |
| TCTACGAGTAGGGAAGGCTA+TGG | 0.618039 | tig0020683:-119218 | Msa1384950:CDS |
| ATTGAGAAGAGGACACGACC+AGG | 0.618593 | tig0020683:+126509 | None:intergenic |
| AATTCAGGTAAGTACTTGCA+CGG | 0.620247 | tig0020683:-126370 | Msa1384950:intron |
| AATTCAGGTAAGTACTTGCA+CGG | 0.620247 | tig0020683:-128874 | Msa1384950:intron |
| ATGGAAACTCCAGAATTCCA+CGG | 0.622816 | tig0020683:+128790 | None:intergenic |
| AAATCCAGCTGCTGGAATTG+CGG | 0.627583 | tig0020683:+128813 | None:intergenic |
| AGGGTATGTTCATTGAGAAG+AGG | 0.632165 | tig0020683:+126498 | None:intergenic |
| ACTACTCTGGTGGATATCGT+AGG | 0.637840 | tig0020683:-128841 | Msa1384950:CDS |
| GTTCAATGAGATCCAATCGT+AGG | 0.645816 | tig0020683:+129014 | None:intergenic |
| TAGAGTTCTACGAGTAGGGA+AGG | 0.651200 | tig0020683:-119224 | Msa1384950:CDS |
| GCTGAATGAGATCCAATCGT+AGG | 0.655399 | tig0020683:+126531 | None:intergenic |
| ATAGGCAGCATCCAAGCATG+AGG | 0.668993 | tig0020683:+126252 | None:intergenic |
| CGACTCCCACGGAAATCCAG+CGG | 0.672848 | tig0020683:+126297 | None:intergenic |
| TCAGGTAAGTACTTGCACGG+TGG | 0.784220 | tig0020683:-126367 | Msa1384950:intron |
| TCAGGTAAGTACTTGCACGG+TGG | 0.784220 | tig0020683:-128871 | Msa1384950:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATATTAAATAAAAAA+TGG | - | tig0020683:127292-127311 | Msa1384950:intron | 0.0% |
| !!! | TTTTATAAATTATGTTACAA+TGG | + | tig0020683:117761-117780 | None:intergenic | 10.0% |
| !!! | TCAAACATTTAATTTTTTAT+TGG | + | tig0020683:117914-117933 | None:intergenic | 10.0% |
| !!! | AATCAAAATTTGTTTATTTA+GGG | + | tig0020683:119847-119866 | None:intergenic | 10.0% |
| !!! | AAATCAAAATTTGTTTATTT+AGG | + | tig0020683:119848-119867 | None:intergenic | 10.0% |
| !!! | TTATTCAATATTTTTATTTG+AGG | - | tig0020683:121226-121245 | Msa1384950:intron | 10.0% |
| !!! | TTATTCAATATTTTTATTTG+AGG | - | tig0020683:121226-121245 | Msa1384950:intron | 10.0% |
| !!! | AAATGTTATATTTTAAATGT+GGG | + | tig0020683:127200-127219 | None:intergenic | 10.0% |
| !!! | AAAATGTTATATTTTAAATG+TGG | + | tig0020683:127201-127220 | None:intergenic | 10.0% |
| !! | ATATTAAATAAAAAATGGAA+AGG | - | tig0020683:127297-127316 | Msa1384950:intron | 10.0% |
| !! | TAAAAAAAAAAAAATCCATA+TGG | - | tig0020683:128402-128421 | Msa1384950:intron | 10.0% |
| !! | AAAAAAAAAAAAATCCATAT+GGG | - | tig0020683:128403-128422 | Msa1384950:intron | 10.0% |
| !!! | TTTTTAAAAGAAAAACTTTA+TGG | - | tig0020683:128638-128657 | Msa1384950:intron | 10.0% |
| !!! | TTTTAAAAGAAAAACTTTAT+GGG | - | tig0020683:128639-128658 | Msa1384950:intron | 10.0% |
| !!! | TTATTTTATTTTTTATTAGC+AGG | + | tig0020683:129012-129031 | None:intergenic | 10.0% |
| !! | GAGAATTAATTAGTTAATAT+TGG | + | tig0020683:116943-116962 | None:intergenic | 15.0% |
| !! | CAAAAAAAATGAATGTTAAA+TGG | + | tig0020683:117343-117362 | None:intergenic | 15.0% |
| !! | AAATGAGTTTAACATAAAAT+GGG | + | tig0020683:117862-117881 | None:intergenic | 15.0% |
| !! | AAAATGAGTTTAACATAAAA+TGG | + | tig0020683:117863-117882 | None:intergenic | 15.0% |
| !!! | TGTTTTATTATGTTTAAGAT+TGG | + | tig0020683:118209-118228 | None:intergenic | 15.0% |
| !! | ATCTTAAACATAATAAAACA+AGG | - | tig0020683:118209-118228 | Msa1384950:intron | 15.0% |
| !! | CTAAAAAAAACAATATATCA+GGG | + | tig0020683:119422-119441 | None:intergenic | 15.0% |
| !! | ACTAAAAAAAACAATATATC+AGG | + | tig0020683:119423-119442 | None:intergenic | 15.0% |
| !! | GCAAATTAATCAATTAATTT+AGG | + | tig0020683:119447-119466 | None:intergenic | 15.0% |
| !!! | TAATTATTTTAGCAAAACTT+GGG | + | tig0020683:120488-120507 | None:intergenic | 15.0% |
| !!! | ATAATTATTTTAGCAAAACT+TGG | + | tig0020683:120489-120508 | None:intergenic | 15.0% |
| !!! | GTTTTGCTAAAATAATTATT+TGG | - | tig0020683:120490-120509 | Msa1384950:intron | 15.0% |
| !!! | GTACTCAATATAATATATTT+TGG | - | tig0020683:120722-120741 | Msa1384950:intron | 15.0% |
| !!! | AATTTTAAATTTGAGTAACT+TGG | - | tig0020683:122366-122385 | Msa1384950:intron | 15.0% |
| !!! | AATGTTATATTTTAAATGTG+GGG | + | tig0020683:127199-127218 | None:intergenic | 15.0% |
| !! | AAATTATAAATAGTTGTGAA+AGG | - | tig0020683:127701-127720 | Msa1384950:intron | 15.0% |
| !! | AAAAGAATTGAAGAAATTAA+AGG | - | tig0020683:127930-127949 | Msa1384950:intron | 15.0% |
| !! | AAACAAAAATTTACTAGTAA+CGG | + | tig0020683:128573-128592 | None:intergenic | 15.0% |
| !!! | ACAAAAGTATAAAAGTATAA+TGG | + | tig0020683:128816-128835 | None:intergenic | 15.0% |
| !! | ACAAAAAAAAGAAAACAGAA+TGG | - | tig0020683:116705-116724 | Msa1384950:intron | 20.0% |
| !! | CAAAAAAAAGAAAACAGAAT+GGG | - | tig0020683:116706-116725 | Msa1384950:intron | 20.0% |
| !!! | TTTCACATTTTACTTACAAA+GGG | + | tig0020683:117238-117257 | None:intergenic | 20.0% |
| !!! | GGAATATTTTATTTGAATCA+TGG | + | tig0020683:117322-117341 | None:intergenic | 20.0% |
| !!! | TCAATCTTGTATTTTCTTAT+TGG | - | tig0020683:117376-117395 | Msa1384950:intron | 20.0% |
| !!! | TGAAGTGAATATTTGTTTTA+GGG | - | tig0020683:119027-119046 | Msa1384950:intron | 20.0% |
| !! | TTATAGATGAGGATAATATA+TGG | + | tig0020683:119160-119179 | None:intergenic | 20.0% |
| !!! | CTAAACATAAAGTCTTATTT+TGG | - | tig0020683:119212-119231 | Msa1384950:CDS | 20.0% |
| !!! | TCTATCTTATGTTGTTTTAA+AGG | - | tig0020683:119627-119646 | Msa1384950:intron | 20.0% |
| !! | TTAAGAGATTGAAATATCTA+TGG | + | tig0020683:119714-119733 | None:intergenic | 20.0% |
| !! | ATTTCAATCTCTTAACTATT+TGG | - | tig0020683:119719-119738 | Msa1384950:intron | 20.0% |
| !!! | AATGCTATAGATTTTAAGTT+TGG | + | tig0020683:119899-119918 | None:intergenic | 20.0% |
| !!! | ATTAATGATTTGATTTCTGT+TGG | + | tig0020683:120123-120142 | None:intergenic | 20.0% |
| !!! | AATTATTTTAGCAAAACTTG+GGG | + | tig0020683:120487-120506 | None:intergenic | 20.0% |
| !!! | ACAATATTTTAGCAAAACTT+GGG | + | tig0020683:120589-120608 | None:intergenic | 20.0% |
| !!! | TATTTTTATTTGAGGAGAAA+TGG | - | tig0020683:121234-121253 | Msa1384950:intron | 20.0% |
| !! | ATTTATCCTTCTTGTATTTA+GGG | + | tig0020683:121723-121742 | None:intergenic | 20.0% |
| !! | CAAATTATTGTTTCACTATA+TGG | + | tig0020683:121862-121881 | None:intergenic | 20.0% |
| !!! | AGTCTTATCATTATCAATTT+TGG | + | tig0020683:121999-122018 | None:intergenic | 20.0% |
| !!! | TTGATAATGATAAGACTTTT+TGG | - | tig0020683:122002-122021 | Msa1384950:intron | 20.0% |
| !! | AAATTGTCTAATTATAACGT+TGG | + | tig0020683:122400-122419 | None:intergenic | 20.0% |
| !!! | TTCTGATTTATATGAACTTT+TGG | + | tig0020683:122449-122468 | None:intergenic | 20.0% |
| !!! | CTAGTTCTTAATTTTTAGAA+GGG | + | tig0020683:122971-122990 | None:intergenic | 20.0% |
| !!! | ACTAGTTCTTAATTTTTAGA+AGG | + | tig0020683:122972-122991 | None:intergenic | 20.0% |
| !!! | TTCTAAAAATTAAGAACTAG+TGG | - | tig0020683:122971-122990 | Msa1384950:intron | 20.0% |
| !! | TCTAAAAATTAAGAACTAGT+GGG | - | tig0020683:122972-122991 | Msa1384950:intron | 20.0% |
| !! | TCTAATTCACCATAAAAAAA+AGG | + | tig0020683:123483-123502 | None:intergenic | 20.0% |
| !! | AATATATGATTGCAAGTTTA+CGG | + | tig0020683:123903-123922 | None:intergenic | 20.0% |
| !! | AATGAGATCTATACTTTATT+TGG | - | tig0020683:124774-124793 | Msa1384950:intron | 20.0% |
| !!! | AACCATTTTTTAAATTCAAG+TGG | - | tig0020683:125120-125139 | Msa1384950:intron | 20.0% |
| !!! | ACCATTTTTTAAATTCAAGT+GGG | - | tig0020683:125121-125140 | Msa1384950:intron | 20.0% |
| !! | ATTAGTAGTGTTTATATAGT+GGG | - | tig0020683:120290-120309 | Msa1384950:intron | 20.0% |
| !!! | ACAATATTTTAGCAAAACTT+GGG | + | tig0020683:120589-120608 | None:intergenic | 20.0% |
| !!! | TATTTTTATTTGAGGAGAAA+TGG | - | tig0020683:121234-121253 | Msa1384950:intron | 20.0% |
| !! | GTAATAATACCATATTAAAG+TGG | - | tig0020683:126154-126173 | Msa1384950:intron | 20.0% |
| !!! | AAATCAAAGTATGTTGTTTT+TGG | + | tig0020683:126437-126456 | None:intergenic | 20.0% |
| !! | GATATCAAATACATAATTTG+AGG | - | tig0020683:126464-126483 | Msa1384950:intron | 20.0% |
| !!! | TTTCACATTTTACTGATAAA+GGG | + | tig0020683:126751-126770 | None:intergenic | 20.0% |
| !!! | TACCACTTTCTTTATTTAAA+AGG | + | tig0020683:127271-127290 | None:intergenic | 20.0% |
| !! | TTAAATAAAAAATGGAAAGG+TGG | - | tig0020683:127300-127319 | Msa1384950:intron | 20.0% |
| !!! | TTAGTTGATTGAACATTTTA+AGG | - | tig0020683:127873-127892 | Msa1384950:intron | 20.0% |
| !!! | TAGTTGATTGAACATTTTAA+GGG | - | tig0020683:127874-127893 | Msa1384950:intron | 20.0% |
| !!! | ATCATTCATTTGATTTTTGT+TGG | + | tig0020683:128245-128264 | None:intergenic | 20.0% |
| !! | TTATCACACTAATCAAATAT+AGG | + | tig0020683:128365-128384 | None:intergenic | 20.0% |
| !! | AACAAAAATTTACTAGTAAC+GGG | + | tig0020683:128572-128591 | None:intergenic | 20.0% |
| !! | TCAAACAATCTTCTTAAAAA+AGG | + | tig0020683:128601-128620 | None:intergenic | 20.0% |
| !!! | GCTGTTTTTTTTTTTTTTGA+AGG | + | tig0020683:128877-128896 | None:intergenic | 20.0% |
| !!! | TTTTATTAGCAGGTTAATTA+CGG | + | tig0020683:129002-129021 | None:intergenic | 20.0% |
| ! | CTAATTAATTCTCAGAATTC+AGG | - | tig0020683:116950-116969 | Msa1384950:intron | 25.0% |
| ! | ACTTACAAAGGGAATATATT+TGG | + | tig0020683:117227-117246 | None:intergenic | 25.0% |
| !! | GTTTCACATTTTACTTACAA+AGG | + | tig0020683:117239-117258 | None:intergenic | 25.0% |
| !! | TACTAACACATGTTTTCATT+AGG | - | tig0020683:117403-117422 | Msa1384950:intron | 25.0% |
| ! | TGATCTAAGAACATTGTTTA+AGG | + | tig0020683:117537-117556 | None:intergenic | 25.0% |
| ! | AACGTCTTATAAAGTAAACA+TGG | - | tig0020683:117625-117644 | Msa1384950:intron | 25.0% |
| !! | GTAGAGTGTTAGAAAAATAT+TGG | + | tig0020683:117797-117816 | None:intergenic | 25.0% |
| ! | TTTATTGGATAAAACTCATG+TGG | + | tig0020683:117899-117918 | None:intergenic | 25.0% |
| !!! | TCCTTTCTTTTGTTTAAAGA+GGG | + | tig0020683:117976-117995 | None:intergenic | 25.0% |
| !!! | ATCCTTTCTTTTGTTTAAAG+AGG | + | tig0020683:117977-117996 | None:intergenic | 25.0% |
| ! | TCTGTAATTTGAGAATTACA+AGG | + | tig0020683:118466-118485 | None:intergenic | 25.0% |
| ! | TCAGAAGAATAGTTTATCTA+GGG | + | tig0020683:118679-118698 | None:intergenic | 25.0% |
| ! | TTCAGAAGAATAGTTTATCT+AGG | + | tig0020683:118680-118699 | None:intergenic | 25.0% |
| !! | AACTATTCTTCTGAAAATGA+TGG | - | tig0020683:118685-118704 | Msa1384950:intron | 25.0% |
| !!! | TATTAAAGTGCCTACTTTTT+AGG | + | tig0020683:118838-118857 | None:intergenic | 25.0% |
| ! | TAAAAAGTAGGCACTTTAAT+AGG | - | tig0020683:118837-118856 | Msa1384950:intron | 25.0% |
| !!! | CTGAAGTGAATATTTGTTTT+AGG | - | tig0020683:119026-119045 | Msa1384950:intron | 25.0% |
| ! | TATGTTGGATATTTGTATGT+TGG | + | tig0020683:119063-119082 | None:intergenic | 25.0% |
| ! | AATATCCAACATATCATGAT+TGG | - | tig0020683:119070-119089 | Msa1384950:intron | 25.0% |
| !!! | AACATAAAGTCTTATTTTGG+AGG | - | tig0020683:119215-119234 | Msa1384950:CDS | 25.0% |
| ! | AGATCTAAGAAAAATTCTTG+AGG | + | tig0020683:119276-119295 | None:intergenic | 25.0% |
| !!! | TTGATTAATTTGCAGAATTC+AGG | - | tig0020683:119454-119473 | Msa1384950:intron | 25.0% |
| ! | ATAAATACGAACATTGACAT+AGG | + | tig0020683:119608-119627 | None:intergenic | 25.0% |
| !!! | AGATTTTAAGTTTGGTATGT+TGG | + | tig0020683:119891-119910 | None:intergenic | 25.0% |
| ! | ATAAACACAAATTCCAATGT+TGG | - | tig0020683:120206-120225 | Msa1384950:intron | 25.0% |
| ! | TAAACACAAATTCCAATGTT+GGG | - | tig0020683:120207-120226 | Msa1384950:intron | 25.0% |
| ! | TTAGTAGTGTTTATATAGTG+AGG | - | tig0020683:120291-120310 | Msa1384950:intron | 25.0% |
| ! | TAGTAGTGTTTATATAGTGA+GGG | - | tig0020683:120292-120311 | Msa1384950:intron | 25.0% |
| !!! | CAATATTTTAGCAAAACTTG+GGG | + | tig0020683:120588-120607 | None:intergenic | 25.0% |
| !!! | CACAATATTTTAGCAAAACT+TGG | + | tig0020683:120590-120609 | None:intergenic | 25.0% |
| !! | CAAGTTTTGCTAAAATATTG+TGG | - | tig0020683:120588-120607 | Msa1384950:intron | 25.0% |
| !!! | GAACGAAATCTAGAATATTT+TGG | - | tig0020683:120610-120629 | Msa1384950:intron | 25.0% |
| !!! | ACAATCTGAAATATTTTGCT+AGG | - | tig0020683:120636-120655 | Msa1384950:intron | 25.0% |
| !!! | GCATGATCTGAAATATATTT+TGG | - | tig0020683:120678-120697 | Msa1384950:intron | 25.0% |
| ! | ACTAATAAGTGAGAAACTTT+GGG | + | tig0020683:120821-120840 | None:intergenic | 25.0% |
| ! | AACTAATAAGTGAGAAACTT+TGG | + | tig0020683:120822-120841 | None:intergenic | 25.0% |
| ! | AAGGGACATATATTATCTAA+GGG | + | tig0020683:121115-121134 | None:intergenic | 25.0% |
| ! | TTAGATAATATATGTCCCTT+CGG | - | tig0020683:121115-121134 | Msa1384950:intron | 25.0% |
| ! | GACATTGTTTATTCCAAATA+GGG | + | tig0020683:121168-121187 | None:intergenic | 25.0% |
| !! | ATTTCTCCAAAGTATCAATA+TGG | + | tig0020683:121290-121309 | None:intergenic | 25.0% |
| !! | TTGATACTTTGGAGAAATTA+AGG | - | tig0020683:121292-121311 | Msa1384950:intron | 25.0% |
| ! | AGAAATTAAGGTTAGAATGA+TGG | - | tig0020683:121304-121323 | Msa1384950:intron | 25.0% |
| ! | GTAACAATACCATATTAAAG+TGG | - | tig0020683:121367-121386 | Msa1384950:intron | 25.0% |
| ! | ATACTGAAACCACTTTAATA+TGG | + | tig0020683:121379-121398 | None:intergenic | 25.0% |
| ! | GAAATCCAAATACAACAATT+TGG | - | tig0020683:121620-121639 | Msa1384950:intron | 25.0% |
| ! | GATTTCCAAATTGTTGTATT+TGG | + | tig0020683:121628-121647 | None:intergenic | 25.0% |
| ! | ATCAAAGAAGTTACTTATTG+AGG | - | tig0020683:121688-121707 | Msa1384950:intron | 25.0% |
| ! | GATTTATCCTTCTTGTATTT+AGG | + | tig0020683:121724-121743 | None:intergenic | 25.0% |
| !! | CGTTGAATTTGTTTGAAATA+TGG | - | tig0020683:121822-121841 | Msa1384950:intron | 25.0% |
| ! | TACGATACATAAGAAATGTT+TGG | - | tig0020683:121928-121947 | Msa1384950:intron | 25.0% |
| !!! | TTATTGATGACTGTGAATTT+TGG | - | tig0020683:122565-122584 | Msa1384950:intron | 25.0% |
| !! | GAATTTTTGTTCATAGACTT+GGG | + | tig0020683:122653-122672 | None:intergenic | 25.0% |
| !! | AGAATTTTTGTTCATAGACT+TGG | + | tig0020683:122654-122673 | None:intergenic | 25.0% |
| ! | AGTTCAAAAATAAGACAAGT+TGG | + | tig0020683:122706-122725 | None:intergenic | 25.0% |
| !!! | ACTTGTCTTATTTTTGAACT+TGG | - | tig0020683:122706-122725 | Msa1384950:intron | 25.0% |
| !!! | CTTGTCTTATTTTTGAACTT+GGG | - | tig0020683:122707-122726 | Msa1384950:intron | 25.0% |
| ! | TCTTAACTATATTTGGATTC+TGG | - | tig0020683:122734-122753 | Msa1384950:intron | 25.0% |
| ! | CGATAAATAACGAAACATAT+AGG | - | tig0020683:122812-122831 | Msa1384950:intron | 25.0% |
| ! | CTAAAAATTAAGAACTAGTG+GGG | - | tig0020683:122973-122992 | Msa1384950:intron | 25.0% |
| ! | TAAAAATTAAGAACTAGTGG+GGG | - | tig0020683:122974-122993 | Msa1384950:intron | 25.0% |
| ! | TTGAGGATATAACTTCTTTA+AGG | + | tig0020683:123145-123164 | None:intergenic | 25.0% |
| ! | TAAAGAAGTTATATCCTCAA+TGG | - | tig0020683:123145-123164 | Msa1384950:intron | 25.0% |
| ! | AAAAAGAAACTAAAACCTGA+TGG | - | tig0020683:123289-123308 | Msa1384950:intron | 25.0% |
| !!! | TGAAAGTTGCCTTTTTTTTA+TGG | - | tig0020683:123471-123490 | Msa1384950:intron | 25.0% |
| ! | AAGTTAGATAATTCTTTGTG+AGG | - | tig0020683:123567-123586 | Msa1384950:intron | 25.0% |
| !! | AGGTCTAAAATAAACTCTTA+AGG | - | tig0020683:123587-123606 | Msa1384950:intron | 25.0% |
| ! | AGTAACCTATTGTACTTAAA+TGG | - | tig0020683:124144-124163 | Msa1384950:intron | 25.0% |
| ! | TTGTACCATTTAAGTACAAT+AGG | + | tig0020683:124152-124171 | None:intergenic | 25.0% |
| ! | TTAGAATACACCTTATGAAA+AGG | - | tig0020683:124945-124964 | Msa1384950:intron | 25.0% |
| !!! | TAAGATTTGCTAGTAAACAA+AGG | + | tig0020683:125073-125092 | None:intergenic | 25.0% |
| !!! | CCATTTTTTAAATTCAAGTG+GGG | - | tig0020683:125122-125141 | Msa1384950:intron | 25.0% |
| !!! | CATTTTTTAAATTCAAGTGG+GGG | - | tig0020683:125123-125142 | Msa1384950:intron | 25.0% |
| ! | CATTAGTAGTGTTTATATAG+TGG | - | tig0020683:120289-120308 | Msa1384950:intron | 25.0% |
| ! | TTAGTAGTGTTTATATAGTG+GGG | - | tig0020683:120291-120310 | Msa1384950:intron | 25.0% |
| !!! | CAATATTTTAGCAAAACTTG+GGG | + | tig0020683:120588-120607 | None:intergenic | 25.0% |
| !!! | CACAATATTTTAGCAAAACT+TGG | + | tig0020683:120590-120609 | None:intergenic | 25.0% |
| !! | CAAGTTTTGCTAAAATATTG+TGG | - | tig0020683:120588-120607 | Msa1384950:intron | 25.0% |
| !!! | GAACGAAATCTAGAATATTT+TGG | - | tig0020683:120610-120629 | Msa1384950:intron | 25.0% |
| !!! | ACAATCTGAAATATTTTGCT+AGG | - | tig0020683:120636-120655 | Msa1384950:intron | 25.0% |
| !!! | GCATGATCTGAAATATATTT+TGG | - | tig0020683:120678-120697 | Msa1384950:intron | 25.0% |
| ! | AAGGGACATATATTATCTAA+TGG | + | tig0020683:121115-121134 | None:intergenic | 25.0% |
| !! | AAAGTACTCTTTATTACGAA+GGG | + | tig0020683:125920-125939 | None:intergenic | 25.0% |
| !!! | AAAAGTACTCTTTATTACGA+AGG | + | tig0020683:125921-125940 | None:intergenic | 25.0% |
| ! | GACATTGTTTATTCCAAATA+GGG | + | tig0020683:121168-121187 | None:intergenic | 25.0% |
| !! | ATTTCTCCAAAGTATCAATA+TGG | + | tig0020683:121290-121309 | None:intergenic | 25.0% |
| !! | TTGATACTTTGGAGAAATTA+AGG | - | tig0020683:121292-121311 | Msa1384950:intron | 25.0% |
| ! | AGAAATTAAGGTTAGAATGA+TGG | - | tig0020683:121304-121323 | Msa1384950:intron | 25.0% |
| ! | GTATTATTACCACTCTATTA+TGG | + | tig0020683:126144-126163 | None:intergenic | 25.0% |
| ! | ATACTGAAACCACTTTAATA+TGG | + | tig0020683:121379-121398 | None:intergenic | 25.0% |
| !! | TTTTGTTACAATTATAAGCG+TGG | - | tig0020683:126666-126685 | Msa1384950:intron | 25.0% |
| ! | ACTGATAAAGGGAATATATT+TGG | + | tig0020683:126740-126759 | None:intergenic | 25.0% |
| !! | GTTTCACATTTTACTGATAA+AGG | + | tig0020683:126752-126771 | None:intergenic | 25.0% |
| !!! | GGAATTGTTTTTTTGAATCA+TGG | + | tig0020683:126837-126856 | None:intergenic | 25.0% |
| ! | AAAACAGAAACAAAACCTAA+TGG | + | tig0020683:126898-126917 | None:intergenic | 25.0% |
| !! | GTTGTACTTTTATCAATGTT+TGG | - | tig0020683:126950-126969 | Msa1384950:intron | 25.0% |
| ! | TACTCAAAATCAGTTATTTG+TGG | + | tig0020683:127007-127026 | None:intergenic | 25.0% |
| !! | GTCCTTTTAAATAAAGAAAG+TGG | - | tig0020683:127266-127285 | Msa1384950:intron | 25.0% |
| ! | TGTATAAACTATGCTACAAT+GGG | + | tig0020683:127618-127637 | None:intergenic | 25.0% |
| ! | TTGTATAAACTATGCTACAA+TGG | + | tig0020683:127619-127638 | None:intergenic | 25.0% |
| ! | TTGTAGCATAGTTTATACAA+AGG | - | tig0020683:127619-127638 | Msa1384950:intron | 25.0% |
| ! | ATTATTACACAGACCATTTA+TGG | + | tig0020683:127660-127679 | None:intergenic | 25.0% |
| ! | TAAATCGTGAATGAAATGTT+AGG | + | tig0020683:127790-127809 | None:intergenic | 25.0% |
| !! | AGTTGATTGAACATTTTAAG+GGG | - | tig0020683:127875-127894 | Msa1384950:intron | 25.0% |
| ! | TATGTTAACTTTCTTAGCTT+GGG | + | tig0020683:128170-128189 | None:intergenic | 25.0% |
| ! | TTATGTTAACTTTCTTAGCT+TGG | + | tig0020683:128171-128190 | None:intergenic | 25.0% |
| ! | GTATCATGTCAAAAATTGAA+AGG | + | tig0020683:128274-128293 | None:intergenic | 25.0% |
| ! | AAATTCTAGTGCATAATTTG+AGG | - | tig0020683:128315-128334 | Msa1384950:intron | 25.0% |
| !! | CAGTTTTCAATAATAGTCAT+TGG | - | tig0020683:128771-128790 | Msa1384950:CDS | 25.0% |
| ! | ATAATAGTCATTGGATCATA+TGG | - | tig0020683:128780-128799 | Msa1384950:CDS | 25.0% |
| ! | TAATAGTCATTGGATCATAT+GGG | - | tig0020683:128781-128800 | Msa1384950:CDS | 25.0% |
| ! | ATATTAAAGCTTGAATCTCT+TGG | + | tig0020683:129139-129158 | None:intergenic | 25.0% |
| GCATGAAATATTGATCTCAA+TGG | + | tig0020683:117071-117090 | None:intergenic | 30.0% | |
| ! | TAGAGTTTTACGAATAGGAA+AGG | - | tig0020683:117132-117151 | Msa1384950:intron | 30.0% |
| ACCACGAATATCCTTAAAAT+CGG | - | tig0020683:117708-117727 | Msa1384950:intron | 30.0% | |
| CCAATAAGAGAATGAATGTT+GGG | + | tig0020683:117819-117838 | None:intergenic | 30.0% | |
| TCCAATAAGAGAATGAATGT+TGG | + | tig0020683:117820-117839 | None:intergenic | 30.0% | |
| !! | CCTTTCTTTTGTTTAAAGAG+GGG | + | tig0020683:117975-117994 | None:intergenic | 30.0% |
| GCATTACAAAATGTGGTATA+AGG | + | tig0020683:118001-118020 | None:intergenic | 30.0% | |
| TCTCATTGCATTACAAAATG+TGG | + | tig0020683:118008-118027 | None:intergenic | 30.0% | |
| GCAATGAGAAGAAAGTAAAT+TGG | - | tig0020683:118019-118038 | Msa1384950:intron | 30.0% | |
| GTTAATTGTGTTCTCAATGA+AGG | - | tig0020683:118041-118060 | Msa1384950:intron | 30.0% | |
| CTTTAAATACTGAAGCAAAG+CGG | - | tig0020683:118739-118758 | Msa1384950:intron | 30.0% | |
| TTTAAATACTGAAGCAAAGC+GGG | - | tig0020683:118740-118759 | Msa1384950:intron | 30.0% | |
| !! | TTTTTAGGAGTTTCCTTATC+CGG | + | tig0020683:118823-118842 | None:intergenic | 30.0% |
| TAAGGAAACTCCTAAAAAGT+AGG | - | tig0020683:118825-118844 | Msa1384950:intron | 30.0% | |
| ACAAATATTCACTTCAGATG+TGG | + | tig0020683:119023-119042 | None:intergenic | 30.0% | |
| AATAGCCAATCATGATATGT+TGG | + | tig0020683:119078-119097 | None:intergenic | 30.0% | |
| ! | ACATATCATGATTGGCTATT+TGG | - | tig0020683:119078-119097 | Msa1384950:intron | 30.0% |
| TTTCAATCGAGTTATAGATG+AGG | + | tig0020683:119171-119190 | None:intergenic | 30.0% | |
| ATATATCAGGGAAAGAGAAA+AGG | + | tig0020683:119410-119429 | None:intergenic | 30.0% | |
| TCAGTTGACACATATTATGT+TGG | + | tig0020683:119681-119700 | None:intergenic | 30.0% | |
| TAATATGTGTCAACTGACAA+TGG | - | tig0020683:119684-119703 | Msa1384950:intron | 30.0% | |
| ! | ACAAATATTTTTCCTCGCAT+TGG | + | tig0020683:119764-119783 | None:intergenic | 30.0% |
| ! | AATGATTCTGTTAGCTTAGT+TGG | + | tig0020683:120061-120080 | None:intergenic | 30.0% |
| ! | CAAAGTATCATGTCAAAAGT+CGG | + | tig0020683:120153-120172 | None:intergenic | 30.0% |
| ! | CTTTTGACATGATACTTTGT+TGG | - | tig0020683:120154-120173 | Msa1384950:intron | 30.0% |
| GTTGTGTGAATTGAAAAAAG+TGG | - | tig0020683:120240-120259 | Msa1384950:intron | 30.0% | |
| TATGTACCTCCATTAATTAG+AGG | + | tig0020683:120322-120341 | None:intergenic | 30.0% | |
| ! | AAAGAGTTTCATTGAGTTGT+CGG | - | tig0020683:120891-120910 | Msa1384950:intron | 30.0% |
| GAAGGGACATATATTATCTA+AGG | + | tig0020683:121116-121135 | None:intergenic | 30.0% | |
| ! | AAAGTACTCTTTATTCCGAA+GGG | + | tig0020683:121133-121152 | None:intergenic | 30.0% |
| !! | AAAAGTACTCTTTATTCCGA+AGG | + | tig0020683:121134-121153 | None:intergenic | 30.0% |
| TTAAGATCATAGTCCCTATT+TGG | - | tig0020683:121152-121171 | Msa1384950:intron | 30.0% | |
| GGACATTGTTTATTCCAAAT+AGG | + | tig0020683:121169-121188 | None:intergenic | 30.0% | |
| !! | TTTTATTTGAGGAGAAATGG+TGG | - | tig0020683:121237-121256 | Msa1384950:intron | 30.0% |
| GTATTGTTACCACTCTATTA+TGG | + | tig0020683:121357-121376 | None:intergenic | 30.0% | |
| GAGAATTACACCTTCAAATA+TGG | + | tig0020683:121420-121439 | None:intergenic | 30.0% | |
| CTTCGGTAGATAATAGAATT+TGG | - | tig0020683:121598-121617 | Msa1384950:intron | 30.0% | |
| AATTGTCCCTAAATACAAGA+AGG | - | tig0020683:121714-121733 | Msa1384950:intron | 30.0% | |
| ! | CGTAACAAACTAAACTTGTT+TGG | + | tig0020683:121912-121931 | None:intergenic | 30.0% |
| GGGATTGTCTTAACTATATT+TGG | - | tig0020683:122727-122746 | Msa1384950:intron | 30.0% | |
| ! | CACTAGTTCTTTAGTTAAAG+GGG | + | tig0020683:122904-122923 | None:intergenic | 30.0% |
| ! | CCACTAGTTCTTTAGTTAAA+GGG | + | tig0020683:122905-122924 | None:intergenic | 30.0% |
| CCTTTAACTAAAGAACTAGT+GGG | - | tig0020683:122903-122922 | Msa1384950:intron | 30.0% | |
| CTTTAACTAAAGAACTAGTG+GGG | - | tig0020683:122904-122923 | Msa1384950:intron | 30.0% | |
| TTTAACTAAAGAACTAGTGG+GGG | - | tig0020683:122905-122924 | Msa1384950:intron | 30.0% | |
| ATAGTTATGAGAACATCGTA+CGG | - | tig0020683:123029-123048 | Msa1384950:intron | 30.0% | |
| GGACTTTATGGTTTATACAT+TGG | - | tig0020683:123103-123122 | Msa1384950:intron | 30.0% | |
| AGAAGCAATAAACGATGAAA+TGG | - | tig0020683:123184-123203 | Msa1384950:intron | 30.0% | |
| GTCTAACAAAACATGACAAT+TGG | - | tig0020683:123217-123236 | Msa1384950:intron | 30.0% | |
| AAAATCCAAATACAACCGTT+TGG | + | tig0020683:123267-123286 | None:intergenic | 30.0% | |
| ! | AAACGGTTGTATTTGGATTT+TGG | - | tig0020683:123266-123285 | Msa1384950:intron | 30.0% |
| AAGGAACGACATGAAAAATT+TGG | - | tig0020683:123606-123625 | Msa1384950:intron | 30.0% | |
| GAATTACTTCAACTTTGTCT+AGG | + | tig0020683:123792-123811 | None:intergenic | 30.0% | |
| GACAAAGTTGAAGTAATTCT+TGG | - | tig0020683:123793-123812 | Msa1384950:intron | 30.0% | |
| CACAAATTGAGAAGATCTTA+AGG | - | tig0020683:123861-123880 | Msa1384950:intron | 30.0% | |
| AAAACACTAGAGAAAACTAG+TGG | - | tig0020683:124294-124313 | Msa1384950:intron | 30.0% | |
| ! | CAATTTAACACTTCTGGAAA+CGG | + | tig0020683:124371-124390 | None:intergenic | 30.0% |
| TCACAACAATTTAACACTTC+TGG | + | tig0020683:124377-124396 | None:intergenic | 30.0% | |
| ATTGAGAATCGTTACTACAA+TGG | - | tig0020683:124419-124438 | Msa1384950:intron | 30.0% | |
| TTAGTTAATCCTTTGACGAA+AGG | - | tig0020683:124541-124560 | Msa1384950:intron | 30.0% | |
| TTAGTAATTCCTTTCGTCAA+AGG | + | tig0020683:124553-124572 | None:intergenic | 30.0% | |
| ! | GATCTATACTTTATTTGGAG+TGG | - | tig0020683:124779-124798 | Msa1384950:intron | 30.0% |
| CTATACGAATGTGGAAATAA+GGG | - | tig0020683:124838-124857 | Msa1384950:intron | 30.0% | |
| TTATGAAAAGGTTTGTGTGT+GGG | - | tig0020683:124957-124976 | Msa1384950:intron | 30.0% | |
| CCCCACTTGAATTTAAAAAA+TGG | + | tig0020683:125125-125144 | None:intergenic | 30.0% | |
| ATAAACACAAATTCCCATGT+TGG | - | tig0020683:125183-125202 | Msa1384950:intron | 30.0% | |
| TAAACACAAATTCCCATGTT+GGG | - | tig0020683:125184-125203 | Msa1384950:intron | 30.0% | |
| TAGTAGTGTTTATATAGTGG+GGG | - | tig0020683:125269-125288 | Msa1384950:intron | 30.0% | |
| TTAAGATCATAGTCCCTATT+TGG | - | tig0020683:121152-121171 | Msa1384950:intron | 30.0% | |
| GGACATTGTTTATTCCAAAT+AGG | + | tig0020683:121169-121188 | None:intergenic | 30.0% | |
| GGAATCAAGAATGATCTTAA+CGG | - | tig0020683:125980-125999 | Msa1384950:intron | 30.0% | |
| !! | TTTTATTTGAGGAGAAATGG+TGG | - | tig0020683:121237-121256 | Msa1384950:intron | 30.0% |
| GAGAATTACACCTTCAAATA+TGG | + | tig0020683:121420-121439 | None:intergenic | 30.0% | |
| ACTCAACCTAATAACAACTT+CGG | - | tig0020683:126368-126387 | Msa1384950:intron | 30.0% | |
| ! | TATCTACCGAAGTTGTTATT+AGG | + | tig0020683:126377-126396 | None:intergenic | 30.0% |
| CTTCGGTAGATAATAGAATT+TGG | - | tig0020683:121598-121617 | Msa1384950:intron | 30.0% | |
| GAAATCCAAATACAACAGTT+TGG | - | tig0020683:126407-126426 | Msa1384950:intron | 30.0% | |
| GATTTCCAAACTGTTGTATT+TGG | + | tig0020683:126415-126434 | None:intergenic | 30.0% | |
| AATTCACACAGATCCAATAT+AGG | + | tig0020683:126514-126533 | None:intergenic | 30.0% | |
| CTACAATTACACAAGTCATA+GGG | + | tig0020683:126575-126594 | None:intergenic | 30.0% | |
| TTGAATCATGGTCAAATAGA+TGG | + | tig0020683:126825-126844 | None:intergenic | 30.0% | |
| CGTGAGAAATGAATGTTAAA+TGG | + | tig0020683:126858-126877 | None:intergenic | 30.0% | |
| ACATTCATTTCTCACGTAAT+TGG | - | tig0020683:126862-126881 | Msa1384950:intron | 30.0% | |
| ATTTCTCACGTAATTGGATT+GGG | - | tig0020683:126868-126887 | Msa1384950:intron | 30.0% | |
| AAATCAGTTATTTGTGGCTT+TGG | + | tig0020683:127001-127020 | None:intergenic | 30.0% | |
| TTTGAGTATATCCTTACAGT+AGG | - | tig0020683:127019-127038 | Msa1384950:intron | 30.0% | |
| GTAAAAGGAAAGATTGTTGA+AGG | - | tig0020683:127065-127084 | Msa1384950:intron | 30.0% | |
| TAGAATGTGAGATGATTACT+TGG | - | tig0020683:127100-127119 | Msa1384950:intron | 30.0% | |
| ACATAAACGTGATGTAAACA+AGG | - | tig0020683:127372-127391 | Msa1384950:intron | 30.0% | |
| CATAAACGTGATGTAAACAA+GGG | - | tig0020683:127373-127392 | Msa1384950:intron | 30.0% | |
| !! | AGGAAAGAAAGTATTGTTTG+TGG | + | tig0020683:127480-127499 | None:intergenic | 30.0% |
| GCATAGTTTATACAAAGGAA+AGG | - | tig0020683:127624-127643 | Msa1384950:intron | 30.0% | |
| AGTTTATACAAAGGAAAGGA+TGG | - | tig0020683:127628-127647 | Msa1384950:intron | 30.0% | |
| !! | TAAGTAGTTCAACTGATTTG+AGG | - | tig0020683:127900-127919 | Msa1384950:intron | 30.0% |
| TTGAAGAAATTAAAGGACTC+AGG | - | tig0020683:127937-127956 | Msa1384950:intron | 30.0% | |
| !!! | ATGGTTTTGAAAGAAACATC+AGG | + | tig0020683:128035-128054 | None:intergenic | 30.0% |
| ! | ATTTGTTGAGTTTGAAGTGA+GGG | - | tig0020683:128053-128072 | Msa1384950:intron | 30.0% |
| GAACATGATTGAAAGAATGA+AGG | - | tig0020683:128088-128107 | Msa1384950:intron | 30.0% | |
| ! | TCATTGACTAACATAACAGA+AGG | - | tig0020683:128191-128210 | Msa1384950:intron | 30.0% |
| TAGTGCATAATTTGAGGAAT+AGG | - | tig0020683:128321-128340 | Msa1384950:intron | 30.0% | |
| ! | GGAATAGGAGATTATTTTCA+TGG | - | tig0020683:128336-128355 | Msa1384950:intron | 30.0% |
| ! | AGACTGATCAAATTTTTGCT+AGG | - | tig0020683:128526-128545 | Msa1384950:intron | 30.0% |
| ! | GACTGATCAAATTTTTGCTA+GGG | - | tig0020683:128527-128546 | Msa1384950:intron | 30.0% |
| ! | ACTGATCAAATTTTTGCTAG+GGG | - | tig0020683:128528-128547 | Msa1384950:intron | 30.0% |
| !! | TTTTCAAAGGGTGCATATTA+GGG | + | tig0020683:128668-128687 | None:intergenic | 30.0% |
| !! | TTTTTCAAAGGGTGCATATT+AGG | + | tig0020683:128669-128688 | None:intergenic | 30.0% |
| ! | AATATGCACCCTTTGAAAAA+AGG | - | tig0020683:128669-128688 | Msa1384950:CDS | 30.0% |
| !!! | TGACTGAACCTTTTTTCAAA+GGG | + | tig0020683:128680-128699 | None:intergenic | 30.0% |
| !!! | ATGACTGAACCTTTTTTCAA+AGG | + | tig0020683:128681-128700 | None:intergenic | 30.0% |
| TTTGAAAAAAGGTTCAGTCA+TGG | - | tig0020683:128680-128699 | Msa1384950:CDS | 30.0% | |
| GACTATTATTGAAAACTGTG+TGG | + | tig0020683:128769-128788 | None:intergenic | 30.0% | |
| TGGATAGGTTTGTCTAATTA+CGG | + | tig0020683:128931-128950 | None:intergenic | 30.0% | |
| AATTAGACAAACCTATCCAA+TGG | - | tig0020683:128932-128951 | Msa1384950:intron | 30.0% | |
| ! | ATTTAAAATGTGCATGCGTT+AGG | + | tig0020683:129113-129132 | None:intergenic | 30.0% |
| ATGATACAAACGAGTAAACG+TGG | + | tig0020683:116883-116902 | None:intergenic | 35.0% | |
| AATTCAGGTAAGTACTTGCA+CGG | - | tig0020683:116965-116984 | Msa1384950:intron | 35.0% | |
| ! | GATGCTAGAGTTTTACGAAT+AGG | - | tig0020683:117127-117146 | Msa1384950:intron | 35.0% |
| AAATGTGAAACTGAGACCAA+AGG | - | tig0020683:117248-117267 | Msa1384950:intron | 35.0% | |
| ATACATCTTCTACTGTCCTT+TGG | + | tig0020683:117267-117286 | None:intergenic | 35.0% | |
| GAAGATGTATGAACTTTCTG+AGG | - | tig0020683:117277-117296 | Msa1384950:intron | 35.0% | |
| CCACGAATATCCTTAAAATC+GGG | - | tig0020683:117709-117728 | Msa1384950:intron | 35.0% | |
| CCCAACATTCATTCTCTTAT+TGG | - | tig0020683:117816-117835 | Msa1384950:intron | 35.0% | |
| CCCCTCTTTAAACAAAAGAA+AGG | - | tig0020683:117972-117991 | Msa1384950:intron | 35.0% | |
| !! | AACATCTGCTTTTCTGTGTT+TGG | + | tig0020683:118158-118177 | None:intergenic | 35.0% |
| GAGCAGACAAGAAATAAAAG+AGG | - | tig0020683:118231-118250 | Msa1384950:intron | 35.0% | |
| GAGAAATTGTTAACCCAGTT+CGG | - | tig0020683:118258-118277 | Msa1384950:intron | 35.0% | |
| ! | TTGCTGAGAGCTTTTGAATA+CGG | + | tig0020683:118341-118360 | None:intergenic | 35.0% |
| ! | TCCTAGGTTGAAATCTTGTT+GGG | + | tig0020683:118395-118414 | None:intergenic | 35.0% |
| ! | TTCCTAGGTTGAAATCTTGT+TGG | + | tig0020683:118396-118415 | None:intergenic | 35.0% |
| AGGTTTGTGATCAGTTGTAA+GGG | + | tig0020683:118446-118465 | None:intergenic | 35.0% | |
| AAGGTTTGTGATCAGTTGTA+AGG | + | tig0020683:118447-118466 | None:intergenic | 35.0% | |
| !! | TGCAAGTTGTTGTGTTTTGA+AGG | + | tig0020683:118508-118527 | None:intergenic | 35.0% |
| !! | TGCACCAAAGCTTTTAAGTA+CGG | + | tig0020683:118532-118551 | None:intergenic | 35.0% |
| ! | AAGCTTTTAAGCAAGGAGTT+AGG | + | tig0020683:118567-118586 | None:intergenic | 35.0% |
| AACTCCTTGCTTAAAAGCTT+CGG | - | tig0020683:118567-118586 | Msa1384950:intron | 35.0% | |
| ! | TATCTTTTGGATGCATGCTT+AGG | + | tig0020683:118625-118644 | None:intergenic | 35.0% |
| ! | TAAGCCTTTCGTGTATCTTT+TGG | + | tig0020683:118638-118657 | None:intergenic | 35.0% |
| ATGGCTTGAATGATTTCTTC+AGG | - | tig0020683:118704-118723 | Msa1384950:intron | 35.0% | |
| CGCTTTGCTTCAGTATTTAA+AGG | + | tig0020683:118741-118760 | None:intergenic | 35.0% | |
| ! | GACTTAGGAAAGTCTTTTGA+AGG | + | tig0020683:118876-118895 | None:intergenic | 35.0% |
| TATGTGATTTCCTAAGGAAG+TGG | + | tig0020683:118903-118922 | None:intergenic | 35.0% | |
| AGAACGTATGTGATTTCCTA+AGG | + | tig0020683:118909-118928 | None:intergenic | 35.0% | |
| TTCTTAGATCTAATCTTGCG+TGG | - | tig0020683:119285-119304 | Msa1384950:intron | 35.0% | |
| AATTCAGGTAAGTACTTGCA+CGG | - | tig0020683:116965-116984 | Msa1384950:intron | 35.0% | |
| ! | TGCTTATTTAGTCTGAAGTG+AGG | - | tig0020683:119928-119947 | Msa1384950:intron | 35.0% |
| ! | GCTTATTTAGTCTGAAGTGA+GGG | - | tig0020683:119929-119948 | Msa1384950:intron | 35.0% |
| AGTGAATGTGCTAAATCCAT+TGG | - | tig0020683:119979-119998 | Msa1384950:intron | 35.0% | |
| ATTAACTAGCGAATGACCAA+TGG | + | tig0020683:119998-120017 | None:intergenic | 35.0% | |
| ! | TCTGTTAGCTTAGTTGGAAT+TGG | + | tig0020683:120055-120074 | None:intergenic | 35.0% |
| ATACTTTGTTGGAACATGTG+TGG | - | tig0020683:120165-120184 | Msa1384950:intron | 35.0% | |
| GACAACTCAATGAAACTCTT+TGG | + | tig0020683:120892-120911 | None:intergenic | 35.0% | |
| ! | AAGAGTTTCATTGAGTTGTC+GGG | - | tig0020683:120892-120911 | Msa1384950:intron | 35.0% |
| TTGTTAAACAAGTCGAAGGA+GGG | + | tig0020683:120975-120994 | None:intergenic | 35.0% | |
| AAAGGAGTAGAAAAAGGAGA+AGG | + | tig0020683:121000-121019 | None:intergenic | 35.0% | |
| AGAACACTCTTAATTCCGAA+GGG | + | tig0020683:121027-121046 | None:intergenic | 35.0% | |
| AAGAACACTCTTAATTCCGA+AGG | + | tig0020683:121028-121047 | None:intergenic | 35.0% | |
| ! | TTAAGACCATAGTCCCTTTT+CGG | - | tig0020683:121046-121065 | Msa1384950:intron | 35.0% |
| ATTAAACCGAAAAGGGACTA+TGG | + | tig0020683:121055-121074 | None:intergenic | 35.0% | |
| AAGGGACATTAAACCGAAAA+GGG | + | tig0020683:121062-121081 | None:intergenic | 35.0% | |
| ! | TTTTCGGTTTAATGTCCCTT+CGG | - | tig0020683:121062-121081 | Msa1384950:intron | 35.0% |
| ATCTAAGGGACTATGAACTT+AGG | + | tig0020683:121101-121120 | None:intergenic | 35.0% | |
| TGGAATAAACAATGTCCTGT+CGG | - | tig0020683:121172-121191 | Msa1384950:intron | 35.0% | |
| GTAGTGCCATATTGATACTT+TGG | - | tig0020683:121281-121300 | Msa1384950:intron | 35.0% | |
| ATGGTAACACCATATTTGAG+TGG | - | tig0020683:121323-121342 | Msa1384950:intron | 35.0% | |
| GTGGTTTCAGTATTAAAGAG+TGG | - | tig0020683:121386-121405 | Msa1384950:intron | 35.0% | |
| GGTCTTAGTACCATATTTGA+AGG | - | tig0020683:121407-121426 | Msa1384950:intron | 35.0% | |
| ! | TTGAAGGTGTAATTCTCGAA+CGG | - | tig0020683:121423-121442 | Msa1384950:intron | 35.0% |
| ! | AATTCTCGAACGGTTTTCTA+CGG | - | tig0020683:121433-121452 | Msa1384950:intron | 35.0% |
| ! | TAGTCTACCTTGCACAATTT+TGG | - | tig0020683:121517-121536 | Msa1384950:intron | 35.0% |
| ! | AGTCTACCTTGCACAATTTT+GGG | - | tig0020683:121518-121537 | Msa1384950:intron | 35.0% |
| ACTCAACCTAGTAACAACTT+CGG | - | tig0020683:121581-121600 | Msa1384950:intron | 35.0% | |
| TATCTACCGAAGTTGTTACT+AGG | + | tig0020683:121590-121609 | None:intergenic | 35.0% | |
| GTAAAACCTATGTCACGTAA+TGG | - | tig0020683:122024-122043 | Msa1384950:intron | 35.0% | |
| TATGCATCCTCATTGATAAG+TGG | - | tig0020683:122085-122104 | Msa1384950:intron | 35.0% | |
| TTGTGTATCATGCATTCTTG+AGG | - | tig0020683:122234-122253 | Msa1384950:intron | 35.0% | |
| GCCTATGAATGTGTATTCAT+CGG | - | tig0020683:122784-122803 | Msa1384950:intron | 35.0% | |
| CCTATGAATGTGTATTCATC+GGG | - | tig0020683:122785-122804 | Msa1384950:intron | 35.0% | |
| CCCTTTAACTAAAGAACTAG+TGG | - | tig0020683:122902-122921 | Msa1384950:intron | 35.0% | |
| ! | CCCACTAGTTCTTTAGTTAA+AGG | + | tig0020683:122906-122925 | None:intergenic | 35.0% |
| TAGTTATGAGAACATCGTAC+GGG | - | tig0020683:123030-123049 | Msa1384950:intron | 35.0% | |
| GATGTTATAGAACCTCAAAG+AGG | - | tig0020683:123052-123071 | Msa1384950:intron | 35.0% | |
| GCAAGAATTGCTAAAGAGTA+TGG | - | tig0020683:123082-123101 | Msa1384950:intron | 35.0% | |
| ! | GCTAAAGAGTATGGACTTTA+TGG | - | tig0020683:123091-123110 | Msa1384950:intron | 35.0% |
| CTCATAGTTGCAAAACCAAA+CGG | - | tig0020683:123249-123268 | Msa1384950:intron | 35.0% | |
| CAAAACCAAACGGTTGTATT+TGG | - | tig0020683:123259-123278 | Msa1384950:intron | 35.0% | |
| GAAACTAAAACCTGATGGTA+CGG | - | tig0020683:123294-123313 | Msa1384950:intron | 35.0% | |
| ! | GTCTAAAACCTTTGACTACA+AGG | + | tig0020683:123339-123358 | None:intergenic | 35.0% |
| ATGGATATGATTCTAGTGAC+TGG | + | tig0020683:123395-123414 | None:intergenic | 35.0% | |
| ! | TAAAGGGACTAGTACTTTCA+TGG | + | tig0020683:123414-123433 | None:intergenic | 35.0% |
| AAGTGTAAGAACACTTGAGA+TGG | - | tig0020683:123929-123948 | Msa1384950:intron | 35.0% | |
| TGTGCAAGTTTACTAGTAGA+CGG | - | tig0020683:124042-124061 | Msa1384950:intron | 35.0% | |
| TCATGACTCTTTCTATAGCA+TGG | + | tig0020683:124082-124101 | None:intergenic | 35.0% | |
| ATGCTATAGAAAGAGTCATG+AGG | - | tig0020683:124081-124100 | Msa1384950:intron | 35.0% | |
| ATCTCAGATTCATTCCATAG+TGG | + | tig0020683:124273-124292 | None:intergenic | 35.0% | |
| !! | GAAACGGTTTTATCCACTAA+GGG | + | tig0020683:124355-124374 | None:intergenic | 35.0% |
| ATGGCAAGAGACGATTATTA+AGG | - | tig0020683:124438-124457 | Msa1384950:intron | 35.0% | |
| AAGTCCTAAACACATCCAAT+AGG | - | tig0020683:124578-124597 | Msa1384950:intron | 35.0% | |
| TCATCCTATTGGATGTGTTT+AGG | + | tig0020683:124585-124604 | None:intergenic | 35.0% | |
| ATCCCAAGAAATAGGTTCAA+TGG | - | tig0020683:124657-124676 | Msa1384950:intron | 35.0% | |
| TCCCAAGAAATAGGTTCAAT+GGG | - | tig0020683:124658-124677 | Msa1384950:intron | 35.0% | |
| ! | ACCCATTGAACCTATTTCTT+GGG | + | tig0020683:124662-124681 | None:intergenic | 35.0% |
| ! | TACCCATTGAACCTATTTCT+TGG | + | tig0020683:124663-124682 | None:intergenic | 35.0% |
| ! | CCTTATTTCCACATTCGTAT+AGG | + | tig0020683:124840-124859 | None:intergenic | 35.0% |
| CCTATACGAATGTGGAAATA+AGG | - | tig0020683:124837-124856 | Msa1384950:intron | 35.0% | |
| ! | CACACACAAACCTTTTCATA+AGG | + | tig0020683:124958-124977 | None:intergenic | 35.0% |
| CTTATGAAAAGGTTTGTGTG+TGG | - | tig0020683:124956-124975 | Msa1384950:intron | 35.0% | |
| GTTGGGTGAATTGAAAAAAG+TGG | - | tig0020683:125217-125236 | Msa1384950:intron | 35.0% | |
| TATGTACCCCCATTAATTAG+AGG | + | tig0020683:125299-125318 | None:intergenic | 35.0% | |
| GACAACTCAATGAAACTCTT+CGG | + | tig0020683:120892-120911 | None:intergenic | 35.0% | |
| ! | GAAGAGTTTCATTGAGTTGT+CGG | - | tig0020683:125678-125697 | Msa1384950:intron | 35.0% |
| ! | AAGAGTTTCATTGAGTTGTC+GGG | - | tig0020683:120892-120911 | Msa1384950:intron | 35.0% |
| TTGTTAAACAAGTCGAAGGA+GGG | + | tig0020683:120975-120994 | None:intergenic | 35.0% | |
| AAAGGAGTAGAAAAAGGAGA+AGG | + | tig0020683:121000-121019 | None:intergenic | 35.0% | |
| AGAACACTCTTAATTCCGAA+GGG | + | tig0020683:121027-121046 | None:intergenic | 35.0% | |
| AAGAACACTCTTAATTCCGA+AGG | + | tig0020683:121028-121047 | None:intergenic | 35.0% | |
| ! | TTAAGACCATAGTCCCTTTT+CGG | - | tig0020683:121046-121065 | Msa1384950:intron | 35.0% |
| AGACCATTCTTAATTCCGAA+GGG | + | tig0020683:125867-125886 | None:intergenic | 35.0% | |
| AAGACCATTCTTAATTCCGA+AGG | + | tig0020683:125868-125887 | None:intergenic | 35.0% | |
| AAGATCATTCTTGATTCCGA+CGG | + | tig0020683:125978-125997 | None:intergenic | 35.0% | |
| GTAGTGCCATATTGATACTT+TGG | - | tig0020683:121281-121300 | Msa1384950:intron | 35.0% | |
| ATGGTAACACCATATTTGAG+TGG | - | tig0020683:121323-121342 | Msa1384950:intron | 35.0% | |
| GTGGTTTCAGTATTAAAGAG+TGG | - | tig0020683:121386-121405 | Msa1384950:intron | 35.0% | |
| GGTCTTAGTACCATATTTGA+AGG | - | tig0020683:121407-121426 | Msa1384950:intron | 35.0% | |
| ! | TTGAAGGTGTAATTCTCGAA+CGG | - | tig0020683:121423-121442 | Msa1384950:intron | 35.0% |
| ! | AATTCTCGAACGGTTTTCTA+CGG | - | tig0020683:121433-121452 | Msa1384950:intron | 35.0% |
| TTAACTGAACAGTTGTAGCT+GGG | - | tig0020683:121464-121483 | Msa1384950:intron | 35.0% | |
| ! | GGAATAAGAGATTCTTTTCC+TGG | - | tig0020683:126485-126504 | Msa1384950:intron | 35.0% |
| ! | CTTTTCCTGGTTTCCTATAT+TGG | - | tig0020683:126498-126517 | Msa1384950:CDS | 35.0% |
| CCTACAATTACACAAGTCAT+AGG | + | tig0020683:126576-126595 | None:intergenic | 35.0% | |
| ! | CCTATGACTTGTGTAATTGT+AGG | - | tig0020683:126573-126592 | Msa1384950:CDS | 35.0% |
| ! | ATGACTTGTGTAATTGTAGG+AGG | - | tig0020683:126576-126595 | Msa1384950:CDS | 35.0% |
| CATTTCTCACGTAATTGGAT+TGG | - | tig0020683:126867-126886 | Msa1384950:intron | 35.0% | |
| ! | ATTGGATTGGGATTTCCATT+AGG | - | tig0020683:126880-126899 | Msa1384950:intron | 35.0% |
| GGATGACGAAAGAAAGTAAA+AGG | - | tig0020683:127050-127069 | Msa1384950:intron | 35.0% | |
| GAAAGTGAGAAGAAAGTGAA+AGG | - | tig0020683:127138-127157 | Msa1384950:intron | 35.0% | |
| TGATGTAAACAAGGGCTATT+TGG | - | tig0020683:127381-127400 | Msa1384950:intron | 35.0% | |
| ! | AAAAGTGTGATTCCATCCTT+TGG | + | tig0020683:127515-127534 | None:intergenic | 35.0% |
| ! | ATTGTGGAAGGATTGATAGT+AGG | + | tig0020683:127557-127576 | None:intergenic | 35.0% |
| GGTTGTTTGTTTATTGTGGA+AGG | + | tig0020683:127569-127588 | None:intergenic | 35.0% | |
| AGGATGGCTTATACCATAAA+TGG | - | tig0020683:127644-127663 | Msa1384950:intron | 35.0% | |
| TTTGAAAGAAACATCAGGCA+TGG | + | tig0020683:128030-128049 | None:intergenic | 35.0% | |
| CTCACTTCAAACTCAACAAA+TGG | + | tig0020683:128054-128073 | None:intergenic | 35.0% | |
| ! | CATTTGTTGAGTTTGAAGTG+AGG | - | tig0020683:128052-128071 | Msa1384950:intron | 35.0% |
| ! | AATCCATATGGGTTATGTCA+CGG | - | tig0020683:128414-128433 | Msa1384950:intron | 35.0% |
| ! | CTGTTTCAAGTACAGAGTTT+GGG | - | tig0020683:128496-128515 | Msa1384950:intron | 35.0% |
| ! | CTGATCAAATTTTTGCTAGG+GGG | - | tig0020683:128529-128548 | Msa1384950:intron | 35.0% |
| ! | TGATCAAATTTTTGCTAGGG+GGG | - | tig0020683:128530-128549 | Msa1384950:intron | 35.0% |
| ! | ACTAGTAACGGGAACATATT+TGG | + | tig0020683:128561-128580 | None:intergenic | 35.0% |
| ! | TTTCAAAGGGTGCATATTAG+GGG | + | tig0020683:128667-128686 | None:intergenic | 35.0% |
| ! | GTGTAGTAGGTTGAACTAAA+AGG | + | tig0020683:128707-128726 | None:intergenic | 35.0% |
| TTAGTTCAACCTACTACACT+AGG | - | tig0020683:128708-128727 | Msa1384950:CDS | 35.0% | |
| CGTTAATTACCTAGTGTAGT+AGG | + | tig0020683:128720-128739 | None:intergenic | 35.0% | |
| CACTAGGTAATTAACGAACT+AGG | - | tig0020683:128724-128743 | Msa1384950:CDS | 35.0% | |
| ! | CTTTTGTCAAACCTATCCAA+TGG | - | tig0020683:128829-128848 | Msa1384950:CDS | 35.0% |
| TGTTATTCTAGCCATTGGAT+AGG | + | tig0020683:128843-128862 | None:intergenic | 35.0% | |
| GGTTTGTCTAATTACGGATA+TGG | + | tig0020683:128925-128944 | None:intergenic | 35.0% | |
| TGTTATTCTAGCCATTGGAT+AGG | + | tig0020683:128843-128862 | None:intergenic | 35.0% | |
| TAGCAGGTTAATTACGGATA+TGG | + | tig0020683:128996-129015 | None:intergenic | 35.0% | |
| !! | GGGAAAAACAGAAGCATCAA+CGG | - | tig0020683:116726-116745 | Msa1384950:intron | 40.0% |
| ! | TGAATTGCCTCAGGAGTTTT+TGG | - | tig0020683:116783-116802 | Msa1384950:intron | 40.0% |
| AGATGTTCCAAAAACTCCTG+AGG | + | tig0020683:116793-116812 | None:intergenic | 40.0% | |
| GTTCAATGAGATCCAATCGT+AGG | + | tig0020683:116828-116847 | None:intergenic | 40.0% | |
| ATACAAACGAGTAAACGTGG+AGG | + | tig0020683:116880-116899 | None:intergenic | 40.0% | |
| ATGGAAACTCCAGAATTCCA+CGG | + | tig0020683:117052-117071 | None:intergenic | 40.0% | |
| GAGTTCAGGAAGAAAAAGAC+TGG | - | tig0020683:117175-117194 | Msa1384950:intron | 40.0% | |
| ! | ACTGGACAAGTTTTTGCTCA+AGG | - | tig0020683:117193-117212 | Msa1384950:intron | 40.0% |
| ! | CTGGACAAGTTTTTGCTCAA+GGG | - | tig0020683:117194-117213 | Msa1384950:intron | 40.0% |
| !! | CCCGATTTTAAGGATATTCG+TGG | + | tig0020683:117712-117731 | None:intergenic | 40.0% |
| ! | TCCTTAAAATCGGGTTGCTT+TGG | - | tig0020683:117718-117737 | Msa1384950:intron | 40.0% |
| ! | CCTTAAAATCGGGTTGCTTT+GGG | - | tig0020683:117719-117738 | Msa1384950:intron | 40.0% |
| !! | TTGTTTAAAGAGGGGTGTCA+TGG | + | tig0020683:117967-117986 | None:intergenic | 40.0% |
| ! | GAAGGACAACTTTTCATGCA+AGG | - | tig0020683:118059-118078 | Msa1384950:intron | 40.0% |
| ! | CCTAGGTTGAAATCTTGTTG+GGG | + | tig0020683:118394-118413 | None:intergenic | 40.0% |
| GCAACCGTACTTAAAAGCTT+TGG | - | tig0020683:118525-118544 | Msa1384950:intron | 40.0% | |
| ! | TACTCCGAAGCTTTTAAGCA+AGG | + | tig0020683:118574-118593 | None:intergenic | 40.0% |
| GCATCCAAAAGATACACGAA+AGG | - | tig0020683:118631-118650 | Msa1384950:intron | 40.0% | |
| AAGCGGGTCATAAACATACA+CGG | - | tig0020683:118756-118775 | Msa1384950:intron | 40.0% | |
| !! | TTGACTGAGTAATGGATCAC+CGG | + | tig0020683:118795-118814 | None:intergenic | 40.0% |
| GATCCATTACTCAGTCAACA+TGG | - | tig0020683:118797-118816 | Msa1384950:intron | 40.0% | |
| ! | TAAGGAAGTGGTAACGACTT+AGG | + | tig0020683:118891-118910 | None:intergenic | 40.0% |
| TAAGTCGTTACCACTTCCTT+AGG | - | tig0020683:118890-118909 | Msa1384950:intron | 40.0% | |
| TACGTTCTGATCTTCTCACA+CGG | - | tig0020683:118921-118940 | Msa1384950:intron | 40.0% | |
| AGGGTATGTTCATTGAGAAG+AGG | + | tig0020683:119344-119363 | None:intergenic | 40.0% | |
| ATACGAACGAGTAAACGTGA+GGG | + | tig0020683:119363-119382 | None:intergenic | 40.0% | |
| TATCAGGGAAAGAGAAAAGG+AGG | + | tig0020683:119407-119426 | None:intergenic | 40.0% | |
| ! | ACTACTTTGGTGGATGTGAT+AGG | - | tig0020683:119502-119521 | Msa1384950:intron | 40.0% |
| !! | ATATTTTTCCTCGCATTGGC+TGG | + | tig0020683:119760-119779 | None:intergenic | 40.0% |
| TCAATGCAGTGATGGTCAAA+AGG | + | tig0020683:119808-119827 | None:intergenic | 40.0% | |
| AACTATCGTCAATGCAGTGA+TGG | + | tig0020683:119816-119835 | None:intergenic | 40.0% | |
| ! | ATCACTGCATTGACGATAGT+TGG | - | tig0020683:119815-119834 | Msa1384950:intron | 40.0% |
| !! | ACACTAGTTCTACCCAACAT+TGG | + | tig0020683:120222-120241 | None:intergenic | 40.0% |
| AAAAAGTGGAAGTCCCACAT+CGG | - | tig0020683:120254-120273 | Msa1384950:intron | 40.0% | |
| ! | GAGGGTGTACCTCTAATTAA+TGG | - | tig0020683:120310-120329 | Msa1384950:intron | 40.0% |
| GGTGTACCTCTAATTAATGG+AGG | - | tig0020683:120313-120332 | Msa1384950:intron | 40.0% | |
| ! | CAATGAAACTCTTTGGTGTG+TGG | + | tig0020683:120885-120904 | None:intergenic | 40.0% |
| CGTCAACACAAGTCAAGAAA+GGG | + | tig0020683:120935-120954 | None:intergenic | 40.0% | |
| TCGTCAACACAAGTCAAGAA+AGG | + | tig0020683:120936-120955 | None:intergenic | 40.0% | |
| CTTGTTAAACAAGTCGAAGG+AGG | + | tig0020683:120976-120995 | None:intergenic | 40.0% | |
| !! | GGACTTGTTAAACAAGTCGA+AGG | + | tig0020683:120979-120998 | None:intergenic | 40.0% |
| GAAGGGACATTAAACCGAAA+AGG | + | tig0020683:121063-121082 | None:intergenic | 40.0% | |
| TGTCCCTTCGGAATTAAGAA+TGG | - | tig0020683:121074-121093 | Msa1384950:intron | 40.0% | |
| GGACCATTCTTAATTCCGAA+GGG | + | tig0020683:121080-121099 | None:intergenic | 40.0% | |
| AGGACCATTCTTAATTCCGA+AGG | + | tig0020683:121081-121100 | None:intergenic | 40.0% | |
| ACATCATTCTTGATTCCGAC+AGG | + | tig0020683:121190-121209 | None:intergenic | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | - | tig0020683:121256-121275 | Msa1384950:intron | 40.0% | |
| GTGCTAAGACCACTCAAATA+TGG | + | tig0020683:121335-121354 | None:intergenic | 40.0% | |
| GTCTTAGCACCATAATAGAG+TGG | - | tig0020683:121345-121364 | Msa1384950:intron | 40.0% | |
| !!! | TAGCTGAGCTTGTTTTATCC+TGG | - | tig0020683:121479-121498 | Msa1384950:intron | 40.0% |
| ! | TCCTCATTGATAAGTGGACT+AGG | - | tig0020683:122091-122110 | Msa1384950:intron | 40.0% |
| ACCTAGTCCACTTATCAATG+AGG | + | tig0020683:122095-122114 | None:intergenic | 40.0% | |
| !! | TCATTGATAAGTGGACTAGG+TGG | - | tig0020683:122094-122113 | Msa1384950:intron | 40.0% |
| !! | CATTGATAAGTGGACTAGGT+GGG | - | tig0020683:122095-122114 | Msa1384950:intron | 40.0% |
| TACTAGTGAGTTCAACTCTC+GGG | + | tig0020683:122762-122781 | None:intergenic | 40.0% | |
| CTACTAGTGAGTTCAACTCT+CGG | + | tig0020683:122763-122782 | None:intergenic | 40.0% | |
| CCCGATGAATACACATTCAT+AGG | + | tig0020683:122788-122807 | None:intergenic | 40.0% | |
| CTTGCTTTCTTACCTCTTTG+AGG | + | tig0020683:123067-123086 | None:intergenic | 40.0% | |
| CCATAATTCAGCATCCATTG+AGG | + | tig0020683:123162-123181 | None:intergenic | 40.0% | |
| CCTCAATGGATGCTGAATTA+TGG | - | tig0020683:123159-123178 | Msa1384950:intron | 40.0% | |
| TATTCATCAACCGTACCATC+AGG | + | tig0020683:123307-123326 | None:intergenic | 40.0% | |
| !! | TGGTACGGTTGATGAATACA+AGG | - | tig0020683:123309-123328 | Msa1384950:intron | 40.0% |
| AGTTACGAACAACGGCTAAA+GGG | + | tig0020683:123430-123449 | None:intergenic | 40.0% | |
| CACTATCGAGTTACGAACAA+CGG | + | tig0020683:123438-123457 | None:intergenic | 40.0% | |
| TAACTCGATAGTGCTCCAAA+TGG | - | tig0020683:123445-123464 | Msa1384950:intron | 40.0% | |
| AGGCAACTTTCACATCCATT+TGG | + | tig0020683:123463-123482 | None:intergenic | 40.0% | |
| AAAACAGATGCGAGCATCAT+TGG | - | tig0020683:123959-123978 | Msa1384950:intron | 40.0% | |
| GAGCATCATTGGCAATACTT+AGG | - | tig0020683:123970-123989 | Msa1384950:intron | 40.0% | |
| ! | TTTTACGACATCGGCAATGT+CGG | + | tig0020683:124018-124037 | None:intergenic | 40.0% |
| ! | GCACAAGAGTTTTACGACAT+CGG | + | tig0020683:124027-124046 | None:intergenic | 40.0% |
| CTCGAGTCATAGTCTTCTTA+AGG | + | tig0020683:124109-124128 | None:intergenic | 40.0% | |
| CTTAAGAAGACTATGACTCG+AGG | - | tig0020683:124107-124126 | Msa1384950:intron | 40.0% | |
| !! | TCGCTTTAAGACTCATCTGA+AGG | + | tig0020683:124185-124204 | None:intergenic | 40.0% |
| !! | GATATTGACTCAGTCCACTA+TGG | - | tig0020683:124256-124275 | Msa1384950:intron | 40.0% |
| !! | GGAAACGGTTTTATCCACTA+AGG | + | tig0020683:124356-124375 | None:intergenic | 40.0% |
| CTAGCTACTCTCAAAAGGAA+CGG | - | tig0020683:124486-124505 | Msa1384950:intron | 40.0% | |
| TACCATCACTTGTGACCTTT+GGG | + | tig0020683:124616-124635 | None:intergenic | 40.0% | |
| TTACCATCACTTGTGACCTT+TGG | + | tig0020683:124617-124636 | None:intergenic | 40.0% | |
| ATGATTCCTGCAACGATAGA+AGG | - | tig0020683:124731-124750 | Msa1384950:intron | 40.0% | |
| TAGACTCACCTATACGAATG+TGG | - | tig0020683:124829-124848 | Msa1384950:intron | 40.0% | |
| ! | GAATTTTACTCGCTATGCAG+AGG | - | tig0020683:125029-125048 | Msa1384950:intron | 40.0% |
| !! | TATGCAGAGGTTCAAGTTGT+AGG | - | tig0020683:125042-125061 | Msa1384950:intron | 40.0% |
| AAATTCAAGTGGGGGATTGT+TGG | - | tig0020683:125131-125150 | Msa1384950:intron | 40.0% | |
| !! | ACACTAGTTCTACCCAACAT+GGG | + | tig0020683:120222-120241 | None:intergenic | 40.0% |
| !! | AACACTAGTTCTACCCAACA+TGG | + | tig0020683:120223-120242 | None:intergenic | 40.0% |
| ATGTTGGGTAGAACTAGTGT+TGG | - | tig0020683:120222-120241 | Msa1384950:intron | 40.0% | |
| TGTTGGGTAGAACTAGTGTT+GGG | - | tig0020683:120223-120242 | Msa1384950:intron | 40.0% | |
| AAAAAGTGGAAGTCCCACAT+CGG | - | tig0020683:120254-120273 | Msa1384950:intron | 40.0% | |
| GGGGTGTACCTCTAATTAAT+GGG | - | tig0020683:125288-125307 | Msa1384950:intron | 40.0% | |
| GGGTGTACCTCTAATTAATG+GGG | - | tig0020683:120312-120331 | Msa1384950:intron | 40.0% | |
| GGTGTACCTCTAATTAATGG+GGG | - | tig0020683:120313-120332 | Msa1384950:intron | 40.0% | |
| CGTCAACACAAGTCAAGAAA+GGG | + | tig0020683:120935-120954 | None:intergenic | 40.0% | |
| ACGTCAACACAAGTCAAGAA+AGG | + | tig0020683:125723-125742 | None:intergenic | 40.0% | |
| CTTGTTAAACAAGTCGAAGG+AGG | + | tig0020683:120976-120995 | None:intergenic | 40.0% | |
| !! | GGACTTGTTAAACAAGTCGA+AGG | + | tig0020683:120979-120998 | None:intergenic | 40.0% |
| GTTAAACCGAAAAGGGACTA+TGG | + | tig0020683:125842-125861 | None:intergenic | 40.0% | |
| AAGGGACGTTAAACCGAAAA+GGG | + | tig0020683:125849-125868 | None:intergenic | 40.0% | |
| ! | TTTTCGGTTTAACGTCCCTT+CGG | - | tig0020683:125849-125868 | Msa1384950:intron | 40.0% |
| TGGAATAAACAATGTCCCGT+CGG | - | tig0020683:125959-125978 | Msa1384950:intron | 40.0% | |
| AGATCATTCTTGATTCCGAC+GGG | + | tig0020683:125977-125996 | None:intergenic | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | - | tig0020683:121256-121275 | Msa1384950:intron | 40.0% | |
| GTGCTAAGACCACTCAAATA+TGG | + | tig0020683:121335-121354 | None:intergenic | 40.0% | |
| GTCTTAGCACCATAATAGAG+TGG | - | tig0020683:121345-121364 | Msa1384950:intron | 40.0% | |
| GTTAACTGAACAGTTGTAGC+TGG | - | tig0020683:121463-121482 | Msa1384950:intron | 40.0% | |
| GCACTACTCAAAATTGTGCA+AGG | + | tig0020683:126314-126333 | None:intergenic | 40.0% | |
| CAGATCCAATATAGGAAACC+AGG | + | tig0020683:126506-126525 | None:intergenic | 40.0% | |
| ATGCTAGAGTTCTACGAGTA+GGG | - | tig0020683:126611-126630 | Msa1384950:intron | 40.0% | |
| CAATTATAAGCGTGGAGTTC+AGG | - | tig0020683:126674-126693 | Msa1384950:intron | 40.0% | |
| GGAGTTCAGGAAGAAAAAGA+CGG | - | tig0020683:117174-117193 | Msa1384950:intron | 40.0% | |
| GAGTTCAGGAAGAAAAAGAC+GGG | - | tig0020683:117175-117194 | Msa1384950:intron | 40.0% | |
| CTGAGAACAAATGACAGAAG+AGG | - | tig0020683:126771-126790 | Msa1384950:intron | 40.0% | |
| !! | TGGCTTTGGTCTCAACTAAA+TGG | + | tig0020683:126987-127006 | None:intergenic | 40.0% |
| !! | TCCTTACAGTAGGCTTTGTT+TGG | - | tig0020683:127029-127048 | Msa1384950:intron | 40.0% |
| TCCAAACAAAGCCTACTGTA+AGG | + | tig0020683:127033-127052 | None:intergenic | 40.0% | |
| GAGATGATTACTTGGCTGTT+TGG | - | tig0020683:127108-127127 | Msa1384950:intron | 40.0% | |
| AAACCTTTCCACCCCAAATT+GGG | + | tig0020683:127445-127464 | None:intergenic | 40.0% | |
| AAAACCTTTCCACCCCAAAT+TGG | + | tig0020683:127446-127465 | None:intergenic | 40.0% | |
| !!! | GGTGGAAAGGTTTTAAGCAT+GGG | - | tig0020683:127452-127471 | Msa1384950:intron | 40.0% |
| !!! | GTGGAAAGGTTTTAAGCATG+GGG | - | tig0020683:127453-127472 | Msa1384950:intron | 40.0% |
| ACGGGGTTGTTTGTTTATTG+TGG | + | tig0020683:127573-127592 | None:intergenic | 40.0% | |
| TAAACAAACAACCCCGTAGT+AGG | - | tig0020683:127576-127595 | Msa1384950:intron | 40.0% | |
| AAACAAACAACCCCGTAGTA+GGG | - | tig0020683:127577-127596 | Msa1384950:intron | 40.0% | |
| ! | GCTGTTTCAAGTACAGAGTT+TGG | - | tig0020683:128495-128514 | Msa1384950:intron | 40.0% |
| AGTCATTGGATCATATGGGT+TGG | - | tig0020683:128785-128804 | Msa1384950:CDS | 40.0% | |
| ACAGCTGTTATTCTAGCCAT+TGG | + | tig0020683:128848-128867 | None:intergenic | 40.0% | |
| ACAGCTGTTATTCTAGCCAT+TGG | + | tig0020683:128848-128867 | None:intergenic | 40.0% | |
| TTCCACCTATAGGAAGCAAA+GGG | + | tig0020683:129043-129062 | None:intergenic | 40.0% | |
| TGCGTTAGGATAATGACGAA+GGG | + | tig0020683:129099-129118 | None:intergenic | 40.0% | |
| ATGCGTTAGGATAATGACGA+AGG | + | tig0020683:129100-129119 | None:intergenic | 40.0% | |
| !! | ACAGAAGCATCAACGGAGAA+AGG | - | tig0020683:116733-116752 | Msa1384950:intron | 45.0% |
| TTGGAACATCTAACCTTGCG+TGG | - | tig0020683:116802-116821 | Msa1384950:intron | 45.0% | |
| CGATTGGATCTCATTGAACC+TGG | - | tig0020683:116829-116848 | Msa1384950:intron | 45.0% | |
| ! | ACTACTCTGGTGGATATCGT+AGG | - | tig0020683:116998-117017 | Msa1384950:intron | 45.0% |
| AAATCCAGCTGCTGGAATTG+CGG | + | tig0020683:117029-117048 | None:intergenic | 45.0% | |
| ! | CCCAAAGCAACCCGATTTTA+AGG | + | tig0020683:117722-117741 | None:intergenic | 45.0% |
| ! | AGTGGATTTCCTTCCTGACT+TGG | + | tig0020683:118310-118329 | None:intergenic | 45.0% |
| ! | TTGAATACGGACTGCACTAG+TGG | + | tig0020683:118328-118347 | None:intergenic | 45.0% |
| CTAGATCATCAGTGCAAACG+TGG | + | tig0020683:118365-118384 | None:intergenic | 45.0% | |
| ! | CACGTTTGCACTGATGATCT+AGG | - | tig0020683:118363-118382 | Msa1384950:intron | 45.0% |
| GGTTGAAATCTTGTTGGGGT+AGG | + | tig0020683:118390-118409 | None:intergenic | 45.0% | |
| CCCCAACAAGATTTCAACCT+AGG | - | tig0020683:118391-118410 | Msa1384950:intron | 45.0% | |
| TCTCAGATCTAGGAGTTCCT+AGG | + | tig0020683:118411-118430 | None:intergenic | 45.0% | |
| TGAGATGGGATCTCAGATCT+AGG | + | tig0020683:118421-118440 | None:intergenic | 45.0% | |
| CAGTTGTAAGGGAGTGAGAT+GGG | + | tig0020683:118435-118454 | None:intergenic | 45.0% | |
| TCAGTTGTAAGGGAGTGAGA+TGG | + | tig0020683:118436-118455 | None:intergenic | 45.0% | |
| AGCGGGTCATAAACATACAC+GGG | - | tig0020683:118757-118776 | Msa1384950:intron | 45.0% | |
| CATTACTCAGTCAACATGGC+CGG | - | tig0020683:118801-118820 | Msa1384950:intron | 45.0% | |
| !! | CGGTTTTGACCAACATAAGC+TGG | - | tig0020683:118941-118960 | Msa1384950:intron | 45.0% |
| GCACGTGTTCGCTTGATTTA+AGG | + | tig0020683:118975-118994 | None:intergenic | 45.0% | |
| GCTGAATGAGATCCAATCGT+AGG | + | tig0020683:119311-119330 | None:intergenic | 45.0% | |
| GATACGAACGAGTAAACGTG+AGG | + | tig0020683:119364-119383 | None:intergenic | 45.0% | |
| GGAAGATGAAGAGAGTAGGT+AGG | + | tig0020683:119386-119405 | None:intergenic | 45.0% | |
| AGGAGGAAGATGAAGAGAGT+AGG | + | tig0020683:119390-119409 | None:intergenic | 45.0% | |
| !! | TGGTGCTATCACTACTTTGG+TGG | - | tig0020683:119492-119511 | Msa1384950:intron | 45.0% |
| !! | GCATGAGGCATTGATCTCTA+CGG | + | tig0020683:119575-119594 | None:intergenic | 45.0% |
| AGAGATCAATGCCTCATGCT+TGG | - | tig0020683:119576-119595 | Msa1384950:intron | 45.0% | |
| ! | TTTGATTTCCAGCCAATGCG+AGG | - | tig0020683:119749-119768 | Msa1384950:intron | 45.0% |
| ! | TTTAGTCTGAAGTGAGGGAG+TGG | - | tig0020683:119934-119953 | Msa1384950:intron | 45.0% |
| ! | TTAGTCTGAAGTGAGGGAGT+GGG | - | tig0020683:119935-119954 | Msa1384950:intron | 45.0% |
| GTGTGTGTTCTATCCGATGT+GGG | + | tig0020683:120270-120289 | None:intergenic | 45.0% | |
| TGTGTGTGTTCTATCCGATG+TGG | + | tig0020683:120271-120290 | None:intergenic | 45.0% | |
| GGACGGAAAGGAGTAGAAAA+AGG | + | tig0020683:121006-121025 | None:intergenic | 45.0% | |
| TTAATTCCGAAGGGACGGAA+AGG | + | tig0020683:121018-121037 | None:intergenic | 45.0% | |
| CACTCTTAATTCCGAAGGGA+CGG | + | tig0020683:121023-121042 | None:intergenic | 45.0% | |
| GCACTACGACCACTCAAATA+TGG | + | tig0020683:121268-121287 | None:intergenic | 45.0% | |
| !!! | CTGAGCTTGTTTTATCCTGG+AGG | - | tig0020683:121482-121501 | Msa1384950:intron | 45.0% |
| !!! | AGCTTGTTTTATCCTGGAGG+CGG | - | tig0020683:121485-121504 | Msa1384950:intron | 45.0% |
| GCACTACCCAAAATTGTGCA+AGG | + | tig0020683:121527-121546 | None:intergenic | 45.0% | |
| !! | GCTCTCTTTAAGACGTTTCG+TGG | + | tig0020683:121549-121568 | None:intergenic | 45.0% |
| CCATCACCATTACGTGACAT+AGG | + | tig0020683:122033-122052 | None:intergenic | 45.0% | |
| CCTATGTCACGTAATGGTGA+TGG | - | tig0020683:122030-122049 | Msa1384950:intron | 45.0% | |
| !!! | AGTGGACTAGGTGGGTTTTA+TGG | - | tig0020683:122103-122122 | Msa1384950:intron | 45.0% |
| ACTAGTGAGTTCAACTCTCG+GGG | + | tig0020683:122761-122780 | None:intergenic | 45.0% | |
| ! | TAATGGGAGCACGACATTAG+TGG | - | tig0020683:122931-122950 | Msa1384950:intron | 45.0% |
| ! | AATGGGAGCACGACATTAGT+GGG | - | tig0020683:122932-122951 | Msa1384950:intron | 45.0% |
| AAGGCTCTCCTTGTAGTCAA+AGG | - | tig0020683:123328-123347 | Msa1384950:intron | 45.0% | |
| GAGTTACGAACAACGGCTAA+AGG | + | tig0020683:123431-123450 | None:intergenic | 45.0% | |
| GCATGAATCGCAAAACGTTC+AGG | + | tig0020683:123528-123547 | None:intergenic | 45.0% | |
| GTCGGGTCTAATACATTCAG+TGG | + | tig0020683:124000-124019 | None:intergenic | 45.0% | |
| TTTACGACATCGGCAATGTC+GGG | + | tig0020683:124017-124036 | None:intergenic | 45.0% | |
| GACTCGAGGATTACTTGACT+AGG | - | tig0020683:124121-124140 | Msa1384950:intron | 45.0% | |
| TGCACATTGAGCATCACTAG+AGG | - | tig0020683:124213-124232 | Msa1384950:intron | 45.0% | |
| TGCTAGTTGAGATCCCTTAG+TGG | - | tig0020683:124339-124358 | Msa1384950:intron | 45.0% | |
| GAGAGCTAGCTACTCTCAAA+AGG | - | tig0020683:124481-124500 | Msa1384950:intron | 45.0% | |
| ! | GGGCATTAGTCTCATCCTAT+TGG | + | tig0020683:124596-124615 | None:intergenic | 45.0% |
| AGGATGAGACTAATGCCCAA+AGG | - | tig0020683:124598-124617 | Msa1384950:intron | 45.0% | |
| GACTGGAGATCCCAAGAAAT+AGG | - | tig0020683:124649-124668 | Msa1384950:intron | 45.0% | |
| TCTCATCCTTCTATCGTTGC+AGG | + | tig0020683:124740-124759 | None:intergenic | 45.0% | |
| ! | GAAATAAGGGCCGATTCCTA+TGG | - | tig0020683:124851-124870 | Msa1384950:intron | 45.0% |
| TATTCTGCCCCGAATTCCAT+AGG | + | tig0020683:124870-124889 | None:intergenic | 45.0% | |
| ! | ACCTAGAGCGTTCGTTAAAC+CGG | - | tig0020683:124889-124908 | Msa1384950:intron | 45.0% |
| TAAACCGGGATACACGTGAA+AGG | - | tig0020683:124904-124923 | Msa1384950:intron | 45.0% | |
| TCTAAAAGCCCGTGCGTTAA+TGG | + | tig0020683:124930-124949 | None:intergenic | 45.0% | |
| GTGTGTGTTCTATCCGATGT+GGG | + | tig0020683:120270-120289 | None:intergenic | 45.0% | |
| TGTGTGTGTTCTATCCGATG+TGG | + | tig0020683:120271-120290 | None:intergenic | 45.0% | |
| ! | GGGGGTGTACCTCTAATTAA+TGG | - | tig0020683:125287-125306 | Msa1384950:intron | 45.0% |
| ! | CAATGAAACTCTTCGGTGTG+TGG | + | tig0020683:125672-125691 | None:intergenic | 45.0% |
| GGACGGAAAGGAGTAGAAAA+AGG | + | tig0020683:121006-121025 | None:intergenic | 45.0% | |
| TTAATTCCGAAGGGACGGAA+AGG | + | tig0020683:121018-121037 | None:intergenic | 45.0% | |
| CACTCTTAATTCCGAAGGGA+CGG | + | tig0020683:121023-121042 | None:intergenic | 45.0% | |
| GAAGGGACGTTAAACCGAAA+AGG | + | tig0020683:125850-125869 | None:intergenic | 45.0% | |
| CGTCCCTTCGGAATTAAGAA+TGG | - | tig0020683:125861-125880 | Msa1384950:intron | 45.0% | |
| GCACTACGACCACTCAAATA+TGG | + | tig0020683:121268-121287 | None:intergenic | 45.0% | |
| !!! | TAGCTGGGCTTGTTTTATCC+TGG | - | tig0020683:126266-126285 | Msa1384950:CDS | 45.0% |
| !! | GCTCTCTTTAAGACGTTTCG+TGG | + | tig0020683:121549-121568 | None:intergenic | 45.0% |
| !! | TATTAGGTTGAGTCACGACC+AGG | + | tig0020683:126361-126380 | None:intergenic | 45.0% |
| GATGCTAGAGTTCTACGAGT+AGG | - | tig0020683:126610-126629 | Msa1384950:intron | 45.0% | |
| TAGAGTTCTACGAGTAGGGA+AGG | - | tig0020683:126615-126634 | Msa1384950:intron | 45.0% | |
| TCCCAACTTTCTCCCCAATT+TGG | - | tig0020683:127429-127448 | Msa1384950:intron | 45.0% | |
| CCCAAATTGGGGAGAAAGTT+GGG | + | tig0020683:127433-127452 | None:intergenic | 45.0% | |
| CCCAACTTTCTCCCCAATTT+GGG | - | tig0020683:127430-127449 | Msa1384950:intron | 45.0% | |
| CCAACTTTCTCCCCAATTTG+GGG | - | tig0020683:127431-127450 | Msa1384950:intron | 45.0% | |
| AACCTTTCCACCCCAAATTG+GGG | + | tig0020683:127444-127463 | None:intergenic | 45.0% | |
| !!! | GGGTGGAAAGGTTTTAAGCA+TGG | - | tig0020683:127451-127470 | Msa1384950:intron | 45.0% |
| TCCTCTGACATGCAAACCAA+AGG | - | tig0020683:127496-127515 | Msa1384950:intron | 45.0% | |
| !! | TCCTTTGGTTTGCATGTCAG+AGG | + | tig0020683:127500-127519 | None:intergenic | 45.0% |
| CTGACATGCAAACCAAAGGA+TGG | - | tig0020683:127500-127519 | Msa1384950:intron | 45.0% | |
| ATATGCACGCAACCCTACTA+CGG | + | tig0020683:127592-127611 | None:intergenic | 45.0% | |
| CTACCGTGACATAACCCATA+TGG | + | tig0020683:128420-128439 | None:intergenic | 45.0% | |
| ! | CATATGGGTTATGTCACGGT+AGG | - | tig0020683:128418-128437 | Msa1384950:intron | 45.0% |
| TCCACCTATAGGAAGCAAAG+GGG | + | tig0020683:129042-129061 | None:intergenic | 45.0% | |
| GTTCCACCTATAGGAAGCAA+AGG | + | tig0020683:129044-129063 | None:intergenic | 45.0% | |
| GTGTTCACTGTTCCACCTAT+AGG | + | tig0020683:129053-129072 | None:intergenic | 45.0% | |
| GAGATAGAGACGGTTGTGAA+AGG | + | tig0020683:129077-129096 | None:intergenic | 45.0% | |
| ATGACGAAGGGAGATAGAGA+CGG | + | tig0020683:129087-129106 | None:intergenic | 45.0% | |
| !!! | AAAACAAAAATTTATTTTTA+TGG | - | tig0020683:117508-117527 | Msa1384950:intron | 5.0% |
| !!! | TTGATATATATTTTATTATT+TGG | - | tig0020683:120363-120382 | Msa1384950:intron | 5.0% |
| !!! | TTGATATATATTTTATTATT+TGG | - | tig0020683:120363-120382 | Msa1384950:intron | 5.0% |
| AGGAGAAGCAGCATCGTCAA+TGG | - | tig0020683:116753-116772 | Msa1384950:intron | 50.0% | |
| AGCAGCATCGTCAATGGTAG+AGG | - | tig0020683:116759-116778 | Msa1384950:intron | 50.0% | |
| GGTAGAGGATGAATTGCCTC+AGG | - | tig0020683:116774-116793 | Msa1384950:intron | 50.0% | |
| ATTGAGAAGACGACACGACC+AGG | + | tig0020683:116850-116869 | None:intergenic | 50.0% | |
| TCAGGTAAGTACTTGCACGG+TGG | - | tig0020683:116968-116987 | Msa1384950:intron | 50.0% | |
| !! | TGGTGCTATCACTACTCTGG+TGG | - | tig0020683:116988-117007 | Msa1384950:intron | 50.0% |
| GCTGGATTTCCGTGGAATTC+TGG | - | tig0020683:117040-117059 | Msa1384950:intron | 50.0% | |
| CTGTTGTAAGCGTGGAGTTC+AGG | - | tig0020683:117161-117180 | Msa1384950:intron | 50.0% | |
| ! | AATCGGGTTGCTTTGGGTGA+TGG | - | tig0020683:117725-117744 | Msa1384950:intron | 50.0% |
| ! | ATCGGGTTGCTTTGGGTGAT+GGG | - | tig0020683:117726-117745 | Msa1384950:intron | 50.0% |
| ACACGGGCTTCAGATCAAAC+CGG | - | tig0020683:118773-118792 | Msa1384950:intron | 50.0% | |
| ! | CGGCCATGTTGACTGAGTAA+TGG | + | tig0020683:118803-118822 | None:intergenic | 50.0% |
| TCAGTCAACATGGCCGGATA+AGG | - | tig0020683:118807-118826 | Msa1384950:intron | 50.0% | |
| TTGACCAACATAAGCTGGCG+TGG | - | tig0020683:118946-118965 | Msa1384950:intron | 50.0% | |
| GAATCCACGCCAGCTTATGT+TGG | + | tig0020683:118953-118972 | None:intergenic | 50.0% | |
| GCGAACACGTGCGTAAACAT+AGG | - | tig0020683:118983-119002 | Msa1384950:intron | 50.0% | |
| CACGTGCGTAAACATAGGCA+AGG | - | tig0020683:118988-119007 | Msa1384950:intron | 50.0% | |
| AATCTTGCGTGGCCTACGAT+TGG | - | tig0020683:119296-119315 | Msa1384950:intron | 50.0% | |
| CGATTGGATCTCATTCAGCC+TGG | - | tig0020683:119312-119331 | Msa1384950:intron | 50.0% | |
| ATTGAGAAGAGGACACGACC+AGG | + | tig0020683:119333-119352 | None:intergenic | 50.0% | |
| TCAGGTAAGTACTTGCACGG+TGG | - | tig0020683:116968-116987 | Msa1384950:intron | 50.0% | |
| !! | CGGTGGTGCTATCACTACTT+TGG | - | tig0020683:119489-119508 | Msa1384950:intron | 50.0% |
| ATAGGCAGCATCCAAGCATG+AGG | + | tig0020683:119590-119609 | None:intergenic | 50.0% | |
| TCTACTCCTTTCCGTCCCTT+CGG | - | tig0020683:121009-121028 | Msa1384950:intron | 50.0% | |
| ACGTCTTAAAGAGAGCGACC+TGG | - | tig0020683:121553-121572 | Msa1384950:intron | 50.0% | |
| ! | TACTAGGTTGAGTCACGACC+AGG | + | tig0020683:121574-121593 | None:intergenic | 50.0% |
| ! | AGAACTAGTGGGGGCTCTAA+TGG | - | tig0020683:122914-122933 | Msa1384950:intron | 50.0% |
| ! | GAACTAGTGGGGGCTCTAAT+GGG | - | tig0020683:122915-122934 | Msa1384950:intron | 50.0% |
| ! | ATGGGAGCACGACATTAGTG+GGG | - | tig0020683:122933-122952 | Msa1384950:intron | 50.0% |
| GATGCTCAATGTGCAGTCAC+TGG | + | tig0020683:124208-124227 | None:intergenic | 50.0% | |
| TGCCCAAAGGTCACAAGTGA+TGG | - | tig0020683:124611-124630 | Msa1384950:intron | 50.0% | |
| GATCTCCAGTCATGTAGGTC+GGG | + | tig0020683:124640-124659 | None:intergenic | 50.0% | |
| GGATCTCCAGTCATGTAGGT+CGG | + | tig0020683:124641-124660 | None:intergenic | 50.0% | |
| CTTGGGATCTCCAGTCATGT+AGG | + | tig0020683:124645-124664 | None:intergenic | 50.0% | |
| GGAGTGGAGTACATAGCTAC+AGG | - | tig0020683:124795-124814 | Msa1384950:intron | 50.0% | |
| ! | GGGCCGATTCCTATGGAATT+CGG | - | tig0020683:124858-124877 | Msa1384950:intron | 50.0% |
| ! | GGCCGATTCCTATGGAATTC+GGG | - | tig0020683:124859-124878 | Msa1384950:intron | 50.0% |
| ! | GCCGATTCCTATGGAATTCG+GGG | - | tig0020683:124860-124879 | Msa1384950:intron | 50.0% |
| GCCCCGAATTCCATAGGAAT+CGG | + | tig0020683:124864-124883 | None:intergenic | 50.0% | |
| ! | CCTAGAGCGTTCGTTAAACC+GGG | - | tig0020683:124890-124909 | Msa1384950:intron | 50.0% |
| ATGGCCTTTCACGTGTATCC+CGG | + | tig0020683:124911-124930 | None:intergenic | 50.0% | |
| CGTGAAAGGCCATTAACGCA+CGG | - | tig0020683:124918-124937 | Msa1384950:intron | 50.0% | |
| GTGAAAGGCCATTAACGCAC+GGG | - | tig0020683:124919-124938 | Msa1384950:intron | 50.0% | |
| GGGGATTGTTGGAACATGTG+TGG | - | tig0020683:125142-125161 | Msa1384950:intron | 50.0% | |
| TCTACTCCTTTCCGTCCCTT+CGG | - | tig0020683:121009-121028 | Msa1384950:intron | 50.0% | |
| !!! | CTGGGCTTGTTTTATCCTGG+AGG | - | tig0020683:126269-126288 | Msa1384950:CDS | 50.0% |
| ACGTCTTAAAGAGAGCGACC+TGG | - | tig0020683:121553-121572 | Msa1384950:intron | 50.0% | |
| TCTACGAGTAGGGAAGGCTA+TGG | - | tig0020683:126621-126640 | Msa1384950:intron | 50.0% | |
| GGCTATGGCTGTTATAAGCG+TGG | - | tig0020683:126636-126655 | Msa1384950:intron | 50.0% | |
| ! | ACGGGCCAGATTTTTGCTCA+GGG | - | tig0020683:126706-126725 | Msa1384950:intron | 50.0% |
| CCCCAAATTGGGGAGAAAGT+TGG | + | tig0020683:127434-127453 | None:intergenic | 50.0% | |
| ACTTTCTCCCCAATTTGGGG+TGG | - | tig0020683:127434-127453 | Msa1384950:intron | 50.0% | |
| TATGCACGCAACCCTACTAC+GGG | + | tig0020683:127591-127610 | None:intergenic | 50.0% | |
| GTAGTAGGGTTGCGTGCATA+TGG | - | tig0020683:127591-127610 | Msa1384950:intron | 50.0% | |
| ! | ATGGGTTATGTCACGGTAGG+AGG | - | tig0020683:128421-128440 | Msa1384950:intron | 50.0% |
| GTTGCCCCTTTGCTTCCTAT+AGG | - | tig0020683:129035-129054 | Msa1384950:CDS | 50.0% | |
| AACCTTGCGTGGCCTACGAT+TGG | - | tig0020683:116813-116832 | Msa1384950:intron | 55.0% | |
| ATCCAATCGTAGGCCACGCA+AGG | + | tig0020683:116818-116837 | None:intergenic | 55.0% | |
| !! | CGGTGGTGCTATCACTACTC+TGG | - | tig0020683:116985-117004 | Msa1384950:intron | 55.0% |
| TTCCAGCAGCTGGATTTCCG+TGG | - | tig0020683:117032-117051 | Msa1384950:intron | 55.0% | |
| TTCCACGGAAATCCAGCTGC+TGG | + | tig0020683:117037-117056 | None:intergenic | 55.0% | |
| GGCTGTAGCTGTTGTAAGCG+TGG | - | tig0020683:117153-117172 | Msa1384950:intron | 55.0% | |
| AGGTGACGTTGCACCGAACT+GGG | + | tig0020683:118274-118293 | None:intergenic | 55.0% | |
| TAGGTGACGTTGCACCGAAC+TGG | + | tig0020683:118275-118294 | None:intergenic | 55.0% | |
| GGTGCAACGTCACCTACTCT+GGG | - | tig0020683:118279-118298 | Msa1384950:intron | 55.0% | |
| GTGCAACGTCACCTACTCTG+GGG | - | tig0020683:118280-118299 | Msa1384950:intron | 55.0% | |
| TGCAACGTCACCTACTCTGG+GGG | - | tig0020683:118281-118300 | Msa1384950:intron | 55.0% | |
| AAATCCAGCGGCGGGAATTG+CGG | + | tig0020683:119533-119552 | None:intergenic | 55.0% | |
| AGTCGAAGGAGGGAGAAGAG+AGG | + | tig0020683:120965-120984 | None:intergenic | 55.0% | |
| ! | TGGGAGCACGACATTAGTGG+GGG | - | tig0020683:122934-122953 | Msa1384950:intron | 55.0% |
| GGTAACCCGACCTACATGAC+TGG | - | tig0020683:124632-124651 | Msa1384950:intron | 55.0% | |
| CCCGGTTTAACGAACGCTCT+AGG | + | tig0020683:124893-124912 | None:intergenic | 55.0% | |
| AGTCGAAGGAGGGAGAAGAG+AGG | + | tig0020683:120965-120984 | None:intergenic | 55.0% | |
| CTATCAATCACGCAGCCTCC+AGG | + | tig0020683:126287-126306 | None:intergenic | 55.0% | |
| ! | GACGGGCCAGATTTTTGCTC+AGG | - | tig0020683:126705-126724 | Msa1384950:intron | 55.0% |
| ! | CGGGCCAGATTTTTGCTCAG+GGG | - | tig0020683:126707-126726 | Msa1384950:intron | 55.0% |
| GACGCCCCTGAGCAAAAATC+TGG | + | tig0020683:126714-126733 | None:intergenic | 55.0% | |
| ! | CTCCCCAATTTGGGGTGGAA+AGG | - | tig0020683:127439-127458 | Msa1384950:intron | 55.0% |
| ATGCACGCAACCCTACTACG+GGG | + | tig0020683:127590-127609 | None:intergenic | 55.0% | |
| GCCCCTTTGCTTCCTATAGG+TGG | - | tig0020683:129038-129057 | Msa1384950:CDS | 55.0% | |
| CGGTGCAACGTCACCTACTC+TGG | - | tig0020683:118278-118297 | Msa1384950:intron | 60.0% | |
| ! | GACTTGGTAGCCCCCAGAGT+AGG | + | tig0020683:118294-118313 | None:intergenic | 60.0% |
| ! | ACTCTGGGGGCTACCAAGTC+AGG | - | tig0020683:118294-118313 | Msa1384950:intron | 60.0% |
| TGGGGGCTACCAAGTCAGGA+AGG | - | tig0020683:118298-118317 | Msa1384950:intron | 60.0% | |
| CGACTCCCACGGAAATCCAG+CGG | + | tig0020683:119545-119564 | None:intergenic | 60.0% | |
| CGCTGGATTTCCGTGGGAGT+CGG | - | tig0020683:119543-119562 | Msa1384950:intron | 60.0% | |
| GCTGGATTTCCGTGGGAGTC+GGG | - | tig0020683:119544-119563 | Msa1384950:intron | 60.0% | |
| ACGGAAACTCCCGACTCCCA+CGG | + | tig0020683:119556-119575 | None:intergenic | 60.0% | |
| ! | GTTTTATCCTGGAGGCGGCG+TGG | - | tig0020683:121490-121509 | Msa1384950:intron | 60.0% |
| GCAGCCGCAATTCCAGCAGC+TGG | - | tig0020683:117022-117041 | Msa1384950:intron | 65.0% | |
| TTCCCGCCGCTGGATTTCCG+TGG | - | tig0020683:119536-119555 | Msa1384950:intron | 65.0% | |
| TCCCGCCGCTGGATTTCCGT+GGG | - | tig0020683:119537-119556 | Msa1384950:intron | 65.0% | |
| TCCCACGGAAATCCAGCGGC+GGG | + | tig0020683:119541-119560 | None:intergenic | 65.0% | |
| CTCCCACGGAAATCCAGCGG+CGG | + | tig0020683:119542-119561 | None:intergenic | 65.0% | |
| CTATCAACCACGCCGCCTCC+AGG | + | tig0020683:121500-121519 | None:intergenic | 65.0% | |
| GCAGCCGCAATTCCCGCCGC+TGG | - | tig0020683:119526-119545 | Msa1384950:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020683 | gene | 116664 | 129197 | 116664 | ID=Msa1384950;Name=Msa1384950 |
| tig0020683 | mRNA | 116664 | 129197 | 116664 | ID=Msa1384950-mRNA-1;Parent=Msa1384950;Name=Msa1384950-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.2|0|0.83|0.8|0.66|6|0|296 |
| tig0020683 | exon | 128978 | 129197 | 128978 | ID=Msa1384950-mRNA-1:exon:9358;Parent=Msa1384950-mRNA-1 |
| tig0020683 | exon | 128660 | 128889 | 128660 | ID=Msa1384950-mRNA-1:exon:9357;Parent=Msa1384950-mRNA-1 |
| tig0020683 | exon | 126495 | 126624 | 126495 | ID=Msa1384950-mRNA-1:exon:9356;Parent=Msa1384950-mRNA-1 |
| tig0020683 | exon | 126246 | 126385 | 126246 | ID=Msa1384950-mRNA-1:exon:9355;Parent=Msa1384950-mRNA-1 |
| tig0020683 | exon | 119104 | 119266 | 119104 | ID=Msa1384950-mRNA-1:exon:9354;Parent=Msa1384950-mRNA-1 |
| tig0020683 | exon | 116664 | 116671 | 116664 | ID=Msa1384950-mRNA-1:exon:9353;Parent=Msa1384950-mRNA-1 |
| tig0020683 | CDS | 128978 | 129197 | 128978 | ID=Msa1384950-mRNA-1:cds;Parent=Msa1384950-mRNA-1 |
| tig0020683 | CDS | 128660 | 128889 | 128660 | ID=Msa1384950-mRNA-1:cds;Parent=Msa1384950-mRNA-1 |
| tig0020683 | CDS | 126495 | 126624 | 126495 | ID=Msa1384950-mRNA-1:cds;Parent=Msa1384950-mRNA-1 |
| tig0020683 | CDS | 126246 | 126385 | 126246 | ID=Msa1384950-mRNA-1:cds;Parent=Msa1384950-mRNA-1 |
| tig0020683 | CDS | 119104 | 119266 | 119104 | ID=Msa1384950-mRNA-1:cds;Parent=Msa1384950-mRNA-1 |
| tig0020683 | CDS | 116664 | 116671 | 116664 | ID=Msa1384950-mRNA-1:cds;Parent=Msa1384950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
