AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1389450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389450 MtrunA17_Chr1g0213991 100.000 201 0 0 1 201 274 474 3.82e-146 414
Msa1389450 MtrunA17_Chr2g0286281 58.436 243 56 5 1 200 266 506 2.62e-83 255
Msa1389450 MtrunA17_Chr7g0263521 75.676 111 27 0 1 111 250 360 4.72e-56 181
Msa1389450 MtrunA17_Chr1g0181821 66.142 127 42 1 1 126 251 377 1.78e-55 180
Msa1389450 MtrunA17_Chr2g0327471 68.142 113 36 0 1 113 268 380 1.08e-51 171
Msa1389450 MtrunA17_Chr3g0098391 67.961 103 33 0 2 104 77 179 3.66e-50 163
Msa1389450 MtrunA17_Chr3g0143961 63.551 107 39 0 1 107 244 350 1.16e-47 160
Msa1389450 MtrunA17_Chr2g0327511 59.829 117 47 0 1 117 285 401 4.86e-47 159
Msa1389450 MtrunA17_Chr7g0251771 45.876 194 72 3 2 195 229 389 5.71e-47 158
Msa1389450 MtrunA17_Chr7g0237401 45.078 193 65 4 2 187 271 429 7.14e-47 159
Msa1389450 MtrunA17_Chr2g0327531 62.617 107 40 0 1 107 220 326 6.76e-45 152
Msa1389450 MtrunA17_Chr5g0443691 66.337 101 34 0 2 102 278 378 7.87e-44 150
Msa1389450 MtrunA17_Chr1g0189791 64.356 101 36 0 2 102 249 349 6.49e-43 151
Msa1389450 MtrunA17_Chr4g0066761 63.366 101 37 0 1 101 248 348 9.22e-43 147
Msa1389450 MtrunA17_Chr2g0288121 58.407 113 45 1 2 114 220 330 1.23e-42 146
Msa1389450 MtrunA17_Chr7g0275131 51.111 135 58 1 2 128 251 385 8.95e-42 148
Msa1389450 MtrunA17_Chr4g0074651 56.410 117 51 0 1 117 300 416 2.56e-40 141
Msa1389450 MtrunA17_Chr1g0153851 48.571 105 54 0 2 106 227 331 4.14e-35 126
Msa1389450 MtrunA17_Chr4g0076271 52.381 105 50 0 1 105 148 252 3.28e-34 122
Msa1389450 MtrunA17_Chr2g0327541 54.701 117 51 2 1 116 289 404 8.79e-34 124
Msa1389450 MtrunA17_Chr2g0320111 54.902 102 46 0 1 102 273 374 3.84e-33 122
Msa1389450 MtrunA17_Chr8g0362661 53.398 103 48 0 1 103 317 419 3.95e-33 123
Msa1389450 MtrunA17_Chr5g0416011 53.398 103 48 0 1 103 319 421 1.90e-32 121
Msa1389450 MtrunA17_Chr7g0245571 54.455 101 46 0 1 101 271 371 4.00e-32 120
Msa1389450 MtrunA17_Chr7g0216551 50.485 103 51 0 1 103 307 409 2.17e-31 119
Msa1389450 MtrunA17_Chr8g0380441 50.485 103 51 0 1 103 253 355 3.39e-31 117
Msa1389450 MtrunA17_Chr2g0300711 53.465 101 47 0 1 101 259 359 3.48e-31 119
Msa1389450 MtrunA17_Chr1g0194541 51.020 98 48 0 1 98 469 566 5.55e-31 118
Msa1389450 MtrunA17_Chr7g0262521 42.069 145 76 2 1 141 522 662 8.03e-31 118
Msa1389450 MtrunA17_Chr6g0452761 51.456 103 50 0 1 103 316 418 9.06e-31 117
Msa1389450 MtrunA17_Chr7g0270121 48.980 98 50 0 1 98 558 655 1.40e-30 117
Msa1389450 MtrunA17_Chr2g0299301 46.610 118 62 1 1 117 1236 1353 1.97e-30 117
Msa1389450 MtrunA17_Chr4g0070411 53.465 101 47 0 1 101 265 365 4.66e-30 115
Msa1389450 MtrunA17_Chr1g0183041 52.427 103 49 0 1 103 527 629 6.56e-30 115
Msa1389450 MtrunA17_Chr1g0191631 50.000 110 54 1 2 111 328 436 1.18e-29 113
Msa1389450 MtrunA17_Chr4g0064201 47.788 113 55 1 1 113 293 401 4.70e-29 112
Msa1389450 MtrunA17_Chr4g0069061 44.737 114 59 1 1 114 91 200 5.71e-29 107
Msa1389450 MtrunA17_Chr4g0030301 50.000 100 48 1 2 101 153 250 2.02e-28 107
Msa1389450 MtrunA17_Chr4g0060531 50.000 108 53 1 2 109 267 373 5.22e-28 108
Msa1389450 MtrunA17_Chr3g0136421 42.982 114 61 1 1 114 263 372 7.09e-28 108
Msa1389450 MtrunA17_Chr8g0342071 42.609 115 66 0 1 115 626 740 1.75e-27 108
Msa1389450 MtrunA17_Chr3g0104091 42.982 114 64 1 1 113 237 350 2.50e-27 107
Msa1389450 MtrunA17_Chr5g0416311 43.636 110 62 0 2 111 260 369 2.80e-27 106
Msa1389450 MtrunA17_Chr8g0345471 43.077 130 71 1 1 127 586 715 3.73e-27 107
Msa1389450 MtrunA17_Chr8g0388941 46.939 98 52 0 1 98 251 348 6.72e-27 105
Msa1389450 MtrunA17_Chr1g0213501 54.455 101 45 1 1 101 294 393 1.07e-26 105
Msa1389450 MtrunA17_Chr8g0341881 45.378 119 56 2 2 112 580 697 5.56e-26 104
Msa1389450 MtrunA17_Chr6g0453001 42.982 114 64 1 1 113 238 351 5.94e-26 103
Msa1389450 MtrunA17_Chr3g0111631 44.444 108 60 0 2 109 262 369 2.03e-25 101
Msa1389450 MtrunA17_Chr2g0289161 47.619 105 55 0 1 105 598 702 2.94e-25 102
Msa1389450 MtrunA17_Chr2g0333691 48.958 96 49 0 3 98 296 391 2.98e-25 101
Msa1389450 MtrunA17_Chr7g0276571 40.152 132 74 2 1 127 591 722 3.29e-25 102
Msa1389450 MtrunA17_Chr4g0071221 42.991 107 61 0 1 107 716 822 3.55e-25 102
Msa1389450 MtrunA17_Chr1g0150741 43.478 115 60 2 1 114 262 372 4.92e-25 100
Msa1389450 MtrunA17_Chr8g0365701 45.000 100 52 1 2 98 28 127 4.92e-25 97.1
Msa1389450 MtrunA17_Chr7g0238671 42.537 134 66 2 2 124 259 392 7.85e-25 100
Msa1389450 MtrunA17_Chr5g0408941 47.000 100 53 0 2 101 272 371 8.19e-25 100
Msa1389450 MtrunA17_Chr5g0435211 41.121 107 63 0 2 108 261 367 1.15e-24 99.8
Msa1389450 MtrunA17_Chr4g0008091 41.509 106 62 0 3 108 351 456 1.38e-24 100
Msa1389450 MtrunA17_Chr3g0137191 45.455 99 54 0 4 102 241 339 2.44e-24 98.2
Msa1389450 MtrunA17_Chr2g0328211 41.284 109 63 1 2 110 248 355 3.81e-24 97.4
Msa1389450 MtrunA17_Chr4g0000081 45.000 100 55 0 6 105 582 681 4.90e-24 99.0
Msa1389450 MtrunA17_Chr4g0069241 49.515 103 51 1 1 103 248 349 5.07e-24 97.4
Msa1389450 MtrunA17_Chr2g0281501 47.423 97 51 0 2 98 613 709 6.70e-24 98.6
Msa1389450 MtrunA17_Chr7g0258951 51.456 103 49 1 1 103 257 358 7.66e-24 97.1
Msa1389450 MtrunA17_Chr1g0194101 52.475 101 47 1 1 101 249 348 1.39e-23 96.3
Msa1389450 MtrunA17_Chr4g0031601 40.385 104 62 0 2 105 278 381 1.75e-23 96.7
Msa1389450 MtrunA17_Chr4g0031571 41.667 108 61 1 2 109 279 384 1.86e-23 96.3
Msa1389450 MtrunA17_Chr4g0030471 45.161 93 51 0 2 94 254 346 2.48e-23 95.5
Msa1389450 MtrunA17_Chr2g0328201 45.361 97 52 1 2 98 56 151 2.87e-23 91.7
Msa1389450 MtrunA17_Chr1g0175731 50.485 103 50 1 1 103 261 362 3.48e-23 95.1
Msa1389450 MtrunA17_Chr4g0031541 42.000 100 58 0 2 101 266 365 3.71e-23 95.5
Msa1389450 MtrunA17_Chr4g0030311 47.000 100 44 2 2 101 204 294 5.13e-23 94.0
Msa1389450 MtrunA17_Chr5g0413511 36.585 164 95 5 2 161 233 391 7.07e-23 94.7
Msa1389450 MtrunA17_Chr2g0328171 43.000 100 57 0 2 101 260 359 1.21e-22 94.0
Msa1389450 MtrunA17_Chr8g0370461 40.000 100 60 0 2 101 278 377 1.40e-22 94.0
Msa1389450 MtrunA17_Chr4g0031591 41.000 100 59 0 2 101 276 375 1.96e-22 93.6
Msa1389450 MtrunA17_Chr8g0370571 40.000 100 60 0 2 101 242 341 2.36e-22 92.8
Msa1389450 MtrunA17_Chr5g0406841 43.434 99 54 1 2 98 332 430 2.38e-22 93.6
Msa1389450 MtrunA17_Chr7g0221191 42.478 113 61 2 2 111 569 680 2.74e-22 94.0
Msa1389450 MtrunA17_Chr4g0031561 43.000 100 57 0 2 101 277 376 6.52e-22 92.0
Msa1389450 MtrunA17_Chr7g0264461 37.615 109 68 0 2 110 279 387 8.50e-22 92.0
Msa1389450 MtrunA17_Chr1g0180951 34.127 126 83 0 2 127 274 399 8.84e-22 91.7
Msa1389450 MtrunA17_Chr6g0485721 48.980 98 49 1 2 98 272 369 9.77e-22 91.7
Msa1389450 MtrunA17_Chr7g0244861 43.750 96 54 0 3 98 350 445 1.24e-21 92.0
Msa1389450 MtrunA17_Chr8g0389251 45.361 97 52 1 2 98 579 674 1.34e-21 92.0
Msa1389450 MtrunA17_Chr4g0022431 46.078 102 52 1 2 103 731 829 2.40e-21 91.3
Msa1389450 MtrunA17_Chr3g0084191 48.980 98 49 1 4 101 394 490 2.76e-21 90.9
Msa1389450 MtrunA17_Chr0c01g0489481 42.500 120 64 3 2 118 505 622 3.06e-21 90.9
Msa1389450 MtrunA17_Chr8g0344141 38.596 114 66 1 2 115 260 369 3.55e-21 90.5
Msa1389450 MtrunA17_Chr2g0323941 45.361 97 53 0 2 98 668 764 3.82e-21 90.5
Msa1389450 MtrunA17_Chr2g0330471 44.330 97 53 1 2 98 582 677 1.22e-20 89.0
Msa1389450 MtrunA17_Chr5g0448661 41.489 94 55 0 2 95 286 379 3.33e-20 87.0
Msa1389450 MtrunA17_Chr3g0111581 40.594 101 60 0 1 101 253 353 3.39e-20 86.7
Msa1389450 MtrunA17_Chr4g0055301 35.897 117 69 1 2 112 254 370 4.16e-20 86.7
Msa1389450 MtrunA17_Chr5g0441021 41.584 101 58 1 2 101 254 354 4.25e-20 87.0
Msa1389450 MtrunA17_Chr3g0093381 44.898 98 53 1 2 98 292 389 5.63e-20 86.7
Msa1389450 MtrunA17_Chr1g0149711 44.898 98 54 0 1 98 262 359 5.75e-20 86.3
Msa1389450 MtrunA17_Chr4g0005801 44.898 98 54 0 1 98 365 462 1.01e-19 86.3
Msa1389450 MtrunA17_Chr5g0413981 37.719 114 66 2 2 114 243 352 1.12e-19 85.5
Msa1389450 MtrunA17_Chr8g0348451 35.252 139 87 2 2 140 320 455 1.28e-19 85.9
Msa1389450 MtrunA17_Chr4g0072891 38.384 99 56 2 1 99 442 535 1.34e-19 85.9
Msa1389450 MtrunA17_Chr4g0012871 35.849 106 68 0 3 108 389 494 1.35e-19 85.9
Msa1389450 MtrunA17_Chr8g0336581 36.522 115 66 1 2 109 261 375 1.42e-19 85.5
Msa1389450 MtrunA17_Chr7g0248491 40.351 114 64 2 2 112 337 449 2.33e-19 85.1
Msa1389450 MtrunA17_Chr3g0111551 39.000 100 61 0 2 101 240 339 2.52e-19 84.3
Msa1389450 MtrunA17_Chr5g0412141 41.837 98 53 2 1 98 312 405 3.41e-19 84.7
Msa1389450 MtrunA17_Chr4g0044691 32.168 143 91 2 1 143 501 637 6.59e-19 84.0
Msa1389450 MtrunA17_Chr4g0034931 42.268 97 55 1 2 98 316 411 2.23e-18 82.4
Msa1389450 MtrunA17_Chr3g0145591 41.414 99 56 2 1 98 324 421 3.42e-18 82.0
Msa1389450 MtrunA17_Chr3g0096351 44.330 97 53 1 2 98 357 452 6.61e-18 81.3
Msa1389450 MtrunA17_Chr8g0367241 40.816 98 54 2 1 98 340 433 6.97e-18 80.9
Msa1389450 MtrunA17_Chr5g0434141 37.069 116 70 2 1 113 770 885 1.05e-17 80.9
Msa1389450 MtrunA17_Chr5g0399981 38.144 97 60 0 2 98 248 344 1.84e-17 79.3
Msa1389450 MtrunA17_Chr1g0165571 36.585 123 69 4 5 120 6 126 2.24e-17 75.1
Msa1389450 MtrunA17_Chr3g0125281 46.067 89 47 1 1 89 583 670 2.24e-17 79.7
Msa1389450 MtrunA17_Chr5g0411631 39.175 97 58 1 2 98 773 868 4.50e-17 79.0
Msa1389450 MtrunA17_Chr5g0402071 41.237 97 56 1 2 98 343 438 9.83e-17 77.8
Msa1389450 MtrunA17_Chr6g0485761 40.000 100 57 1 2 98 469 568 2.40e-16 76.6
Msa1389450 MtrunA17_Chr1g0165561 38.393 112 63 3 2 109 74 183 2.68e-16 73.6
Msa1389450 MtrunA17_Chr1g0196381 38.776 98 55 2 1 98 291 383 3.29e-16 75.9
Msa1389450 MtrunA17_Chr1g0159711 42.697 89 50 1 1 89 530 617 3.62e-16 76.3
Msa1389450 MtrunA17_Chr3g0102901 40.625 96 54 2 5 98 957 1051 3.78e-16 76.3
Msa1389450 MtrunA17_Chr7g0271451 42.268 97 55 1 2 98 371 466 5.68e-16 75.5
Msa1389450 MtrunA17_Chr5g0443121 42.268 97 55 1 2 98 359 454 6.40e-16 75.5
Msa1389450 MtrunA17_Chr4g0072901 39.394 99 57 3 1 98 217 313 7.36e-16 74.7
Msa1389450 MtrunA17_Chr2g0333181 39.796 98 58 1 1 98 215 311 9.50e-16 74.3
Msa1389450 MtrunA17_Chr8g0377951 38.182 110 67 1 2 110 748 857 9.72e-16 75.1
Msa1389450 MtrunA17_Chr3g0144551 42.268 97 55 1 2 98 310 405 1.03e-15 74.7
Msa1389450 MtrunA17_Chr2g0286821 39.796 98 54 2 1 98 300 392 1.10e-15 74.7
Msa1389450 MtrunA17_Chr2g0292501 38.462 104 62 2 4 107 698 799 1.10e-15 74.7
Msa1389450 MtrunA17_Chr3g0111611 35.366 82 53 0 22 103 1 82 1.15e-15 69.3
Msa1389450 MtrunA17_Chr8g0364671 36.634 101 63 1 2 101 240 340 1.23e-15 73.9
Msa1389450 MtrunA17_Chr8g0361611 36.752 117 70 2 5 121 627 739 1.26e-15 74.7
Msa1389450 MtrunA17_Chr7g0258451 36.170 94 60 0 5 98 520 613 1.28e-15 74.7
Msa1389450 MtrunA17_Chr2g0326901 38.835 103 61 2 1 102 406 507 1.30e-15 74.7
Msa1389450 MtrunA17_Chr3g0111431 37.755 98 59 2 3 98 364 461 1.96e-15 73.9
Msa1389450 MtrunA17_Chr4g0028841 39.806 103 60 2 1 102 410 511 2.01e-15 73.9
Msa1389450 MtrunA17_Chr1g0165521 37.398 123 68 4 5 120 640 760 2.12e-15 73.9
Msa1389450 MtrunA17_Chr4g0036981 37.755 98 60 1 1 98 478 574 2.17e-15 73.9
Msa1389450 MtrunA17_Chr2g0302631 40.206 97 57 1 2 98 360 455 2.30e-15 73.6
Msa1389450 MtrunA17_Chr3g0130431 39.796 98 58 1 1 98 520 616 3.00e-15 73.6
Msa1389450 MtrunA17_Chr1g0161701 38.235 102 62 1 1 101 756 857 3.00e-15 73.6
Msa1389450 MtrunA17_Chr8g0373501 39.604 101 56 2 2 98 511 610 3.11e-15 73.6
Msa1389450 MtrunA17_Chr6g0475111 39.806 103 58 2 1 103 763 861 3.14e-15 73.6
Msa1389450 MtrunA17_Chr3g0121971 36.364 110 69 1 2 110 764 873 3.33e-15 73.6
Msa1389450 MtrunA17_Chr3g0093611 44.186 86 45 2 3 88 245 327 5.03e-15 72.4
Msa1389450 MtrunA17_Chr3g0123141 40.000 95 56 1 4 98 785 878 5.74e-15 72.8
Msa1389450 MtrunA17_Chr3g0144481 38.614 101 58 2 2 98 263 363 5.74e-15 72.4
Msa1389450 MtrunA17_Chr3g0079661 36.697 109 64 3 6 113 1096 1200 6.07e-15 72.8
Msa1389450 MtrunA17_Chr4g0071481 38.144 97 60 0 2 98 307 403 7.05e-15 72.4
Msa1389450 MtrunA17_Chr4g0033571 41.489 94 54 1 5 98 700 792 8.61e-15 72.4
Msa1389450 MtrunA17_Chr3g0143951 39.175 97 59 0 2 98 265 361 1.53e-14 71.2
Msa1389450 MtrunA17_Chr2g0313911 38.144 97 59 1 2 98 248 343 2.55e-14 70.5
Msa1389450 MtrunA17_Chr1g0161711 35.849 106 61 2 1 102 751 853 2.56e-14 70.9
Msa1389450 MtrunA17_Chr1g0181731 39.583 96 56 2 1 95 773 867 3.40e-14 70.5
Msa1389450 MtrunA17_Chr3g0093601 43.023 86 46 2 3 88 278 360 3.49e-14 70.1
Msa1389450 MtrunA17_Chr1g0202711 34.328 134 87 1 4 137 681 813 5.47e-14 69.7
Msa1389450 MtrunA17_Chr4g0030441 38.144 97 59 1 4 100 677 772 6.50e-14 69.7
Msa1389450 MtrunA17_Chr5g0400681 41.414 99 46 4 8 101 875 966 7.10e-14 69.7
Msa1389450 MtrunA17_Chr8g0341211 34.513 113 66 4 2 109 12 121 7.40e-14 65.9
Msa1389450 MtrunA17_Chr4g0058761 36.735 98 57 3 4 98 952 1047 9.30e-14 69.3
Msa1389450 MtrunA17_Chr2g0280751 36.735 98 60 2 1 98 702 797 9.34e-14 69.3
Msa1389450 MtrunA17_Chr2g0299041 37.374 99 60 2 3 100 290 387 9.41e-14 68.9
Msa1389450 MtrunA17_Chr8g0345561 37.634 93 57 1 6 98 989 1080 1.00e-13 69.3
Msa1389450 MtrunA17_Chr4g0069251 38.144 97 59 1 2 98 355 450 1.06e-13 68.9
Msa1389450 MtrunA17_Chr5g0447001 38.776 98 57 2 4 99 829 925 1.22e-13 68.9
Msa1389450 MtrunA17_Chr1g0161721 35.238 105 61 2 1 101 759 860 1.52e-13 68.6
Msa1389450 MtrunA17_Chr8g0340911 35.714 98 59 3 2 98 741 835 1.69e-13 68.6
Msa1389450 MtrunA17_Chr4g0072221 34.694 98 59 2 1 98 241 333 1.72e-13 68.2
Msa1389450 MtrunA17_Chr7g0273311 38.776 98 55 2 1 98 95 187 1.72e-13 66.6
Msa1389450 MtrunA17_Chr2g0281971 37.374 99 60 2 1 99 224 320 1.81e-13 67.8
Msa1389450 MtrunA17_Chr8g0392271 37.624 101 62 1 2 101 756 856 1.88e-13 68.2
Msa1389450 MtrunA17_Chr1g0204221 30.252 119 79 3 1 118 1 116 2.33e-13 64.7
Msa1389450 MtrunA17_Chr4g0053521 36.735 98 59 2 4 100 1237 1332 2.82e-13 67.8
Msa1389450 MtrunA17_Chr4g0071371 36.364 99 61 2 3 100 312 409 3.11e-13 67.4
Msa1389450 MtrunA17_Chr8g0341081 35.052 97 61 2 2 98 202 296 3.96e-13 66.6
Msa1389450 MtrunA17_Chr8g0358141 36.364 99 62 1 1 99 254 351 4.22e-13 67.0
Msa1389450 MtrunA17_Chr2g0289131 33.058 121 76 1 3 118 488 608 4.51e-13 67.0
Msa1389450 MtrunA17_Chr4g0054521 40.404 99 47 4 8 101 872 963 5.12e-13 67.0
Msa1389450 MtrunA17_Chr2g0284101 36.634 101 62 2 2 101 475 574 5.27e-13 67.0
Msa1389450 MtrunA17_Chr5g0403891 39.604 101 56 2 2 98 430 529 6.20e-13 66.6
Msa1389450 MtrunA17_Chr4g0035464 39.655 116 50 6 8 113 867 972 6.52e-13 66.6
Msa1389450 MtrunA17_Chr8g0369211 40.196 102 52 2 1 98 803 899 6.76e-13 66.6
Msa1389450 MtrunA17_Chr2g0327671 37.113 97 60 1 4 100 680 775 1.05e-12 66.2
Msa1389450 MtrunA17_Chr8g0357781 36.275 102 58 3 1 99 7 104 1.26e-12 62.8
Msa1389450 MtrunA17_Chr2g0329401 39.362 94 54 2 5 98 705 795 1.45e-12 65.9
Msa1389450 MtrunA17_Chr5g0413071 32.673 101 63 2 4 99 486 586 1.48e-12 65.5
Msa1389450 MtrunA17_Chr6g0475131 33.962 106 65 3 1 105 185 286 1.51e-12 65.1
Msa1389450 MtrunA17_Chr8g0358821 39.394 99 58 2 1 99 862 958 1.96e-12 65.5
Msa1389450 MtrunA17_Chr5g0419721 34.951 103 59 3 4 104 827 923 2.06e-12 65.5
Msa1389450 MtrunA17_Chr8g0340891 33.673 98 62 3 2 98 739 834 2.24e-12 65.1
Msa1389450 MtrunA17_Chr8g0341111 35.052 97 61 2 2 98 655 749 2.35e-12 65.1
Msa1389450 MtrunA17_Chr3g0119351 33.019 106 68 1 3 105 553 658 2.58e-12 65.1
Msa1389450 MtrunA17_Chr4g0049551 34.343 99 64 1 2 100 535 632 2.82e-12 64.7
Msa1389450 MtrunA17_Chr5g0442151 41.935 93 50 3 8 98 866 956 3.17e-12 64.7
Msa1389450 MtrunA17_Chr6g0475091 35.922 103 64 2 1 102 757 858 3.42e-12 64.7
Msa1389450 MtrunA17_Chr7g0263591 39.175 97 55 3 1 95 779 873 3.57e-12 64.7
Msa1389450 MtrunA17_Chr4g0048681 33.333 99 65 1 1 99 456 553 4.49e-12 64.3
Msa1389450 MtrunA17_Chr6g0468691 38.144 97 59 1 4 100 674 769 4.53e-12 64.3
Msa1389450 MtrunA17_Chr8g0358101 37.255 102 57 3 1 99 640 737 4.60e-12 64.3
Msa1389450 MtrunA17_Chr5g0440211 38.947 95 51 3 8 95 882 976 4.81e-12 64.3
Msa1389450 MtrunA17_Chr8g0341251 34.694 98 60 3 2 98 203 297 5.18e-12 63.5
Msa1389450 MtrunA17_Chr8g0358911 32.323 99 62 2 3 99 223 318 5.40e-12 63.9
Msa1389450 MtrunA17_Chr8g0352381 39.394 99 55 2 4 100 707 802 6.13e-12 63.9
Msa1389450 MtrunA17_Chr4g0053591 33.036 112 71 2 4 112 326 436 7.14e-12 63.5
Msa1389450 MtrunA17_Chr8g0347571 36.893 103 61 2 1 103 746 844 7.79e-12 63.5
Msa1389450 MtrunA17_Chr8g0358081 37.255 102 57 3 1 99 637 734 8.36e-12 63.5
Msa1389450 MtrunA17_Chr5g0423891 37.255 102 52 3 2 98 339 433 8.49e-12 63.2
Msa1389450 MtrunA17_Chr6g0474991 35.922 103 64 2 1 102 39 140 9.05e-12 61.2
Msa1389450 MtrunA17_Chr2g0278831 36.364 99 60 2 2 98 470 567 9.67e-12 63.2
Msa1389450 MtrunA17_Chr4g0017251 34.694 98 61 2 2 98 852 947 1.13e-11 63.2
Msa1389450 MtrunA17_Chr8g0358071 37.255 102 57 3 1 99 652 749 1.25e-11 63.2
Msa1389450 MtrunA17_Chr6g0475201 33.019 106 66 3 1 105 750 851 1.25e-11 63.2
Msa1389450 MtrunA17_Chr7g0267441 32.381 105 70 1 1 104 774 878 1.28e-11 63.2
Msa1389450 MtrunA17_Chr8g0347671 31.034 116 69 5 2 112 96 205 1.35e-11 61.6
Msa1389450 MtrunA17_Chr7g0274261 29.412 119 83 1 4 122 706 823 1.52e-11 62.8
Msa1389450 MtrunA17_Chr8g0340931 32.653 98 62 3 2 98 741 835 1.58e-11 62.8
Msa1389450 MtrunA17_Chr1g0206331 36.893 103 61 2 1 103 511 609 1.64e-11 62.8
Msa1389450 MtrunA17_Chr7g0245131 33.333 132 82 4 4 132 713 841 1.76e-11 62.8
Msa1389450 MtrunA17_Chr3g0126181 32.456 114 73 3 4 114 945 1057 1.77e-11 62.8
Msa1389450 MtrunA17_Chr1g0181341 38.000 100 56 3 2 99 224 319 1.78e-11 62.4
Msa1389450 MtrunA17_Chr3g0133191 33.654 104 66 2 5 108 249 349 2.03e-11 62.4
Msa1389450 MtrunA17_Chr8g0357981 36.275 102 58 3 1 99 481 578 2.05e-11 62.4
Msa1389450 MtrunA17_Chr8g0340881 33.673 98 61 3 2 98 746 840 2.10e-11 62.4
Msa1389450 MtrunA17_Chr1g0201241 31.193 109 72 2 2 107 899 1007 2.15e-11 62.4
Msa1389450 MtrunA17_Chr6g0474901 34.906 106 64 3 1 105 742 843 2.23e-11 62.4
Msa1389450 MtrunA17_Chr3g0112391 38.095 105 61 2 4 105 523 626 2.24e-11 62.0
Msa1389450 MtrunA17_Chr8g0358781 37.755 98 59 2 1 98 517 612 2.35e-11 62.0
Msa1389450 MtrunA17_Chr8g0341051 29.293 99 66 3 2 99 109 204 2.48e-11 60.8
Msa1389450 MtrunA17_Chr8g0376131 33.019 106 70 1 1 106 227 331 2.70e-11 61.6
Msa1389450 MtrunA17_Chr2g0312561 33.333 99 61 2 3 99 220 315 2.98e-11 61.6
Msa1389450 MtrunA17_Chr2g0280731 34.694 98 62 2 1 98 726 821 3.03e-11 62.0
Msa1389450 MtrunA17_Chr5g0439561 31.933 119 76 2 3 116 510 628 3.15e-11 61.6
Msa1389450 MtrunA17_Chr8g0358831 33.673 98 61 3 2 98 709 803 3.48e-11 61.6
Msa1389450 MtrunA17_Chr4g0049561 35.644 101 64 1 2 102 522 621 3.66e-11 61.6
Msa1389450 MtrunA17_Chr1g0206361 30.303 99 68 1 1 99 519 616 4.19e-11 61.2
Msa1389450 MtrunA17_Chr1g0200911 35.354 99 61 2 2 98 481 578 4.29e-11 61.2
Msa1389450 MtrunA17_Chr8g0357961 38.235 102 56 3 1 99 660 757 5.12e-11 61.2
Msa1389450 MtrunA17_Chr2g0277081 39.394 99 54 4 8 104 870 964 5.36e-11 61.2
Msa1389450 MtrunA17_Chr2g0318301 36.364 110 64 3 4 111 679 784 5.36e-11 61.2
Msa1389450 MtrunA17_Chr8g0369231 38.235 102 54 2 1 98 450 546 5.40e-11 61.2
Msa1389450 MtrunA17_Chr4g0053571 32.143 112 72 2 4 112 675 785 5.47e-11 61.2
Msa1389450 MtrunA17_Chr8g0347661 31.633 98 63 3 2 98 747 841 5.50e-11 61.2
Msa1389450 MtrunA17_Chr7g0237821 33.981 103 61 3 4 104 979 1076 5.66e-11 61.2
Msa1389450 MtrunA17_Chr2g0278851 36.364 99 61 2 1 98 447 544 6.81e-11 60.8
Msa1389450 MtrunA17_Chr3g0125631 35.052 97 61 2 3 98 248 343 7.44e-11 60.5
Msa1389450 MtrunA17_Chr5g0413291 33.673 98 63 2 2 98 479 575 7.49e-11 60.5
Msa1389450 MtrunA17_Chr4g0048581 35.714 98 61 2 1 98 707 802 7.54e-11 60.8
Msa1389450 MtrunA17_Chr7g0219611 32.000 100 68 0 1 100 690 789 7.56e-11 60.8
Msa1389450 MtrunA17_Chr1g0190581 31.858 113 74 2 4 115 701 811 7.72e-11 60.8
Msa1389450 MtrunA17_Chr8g0340871 29.565 115 76 4 1 113 749 860 7.88e-11 60.8
Msa1389450 MtrunA17_Chr7g0258431 36.842 95 53 2 8 95 26 120 8.47e-11 59.3
Msa1389450 MtrunA17_Chr3g0095081 37.634 93 55 3 8 99 910 1000 9.09e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389450 AT5G13160.1 77.551 196 34 2 1 195 263 449 4.94e-105 310
Msa1389450 AT5G18610.1 54.941 253 61 7 1 200 260 512 6.68e-71 224
Msa1389450 AT5G18610.2 54.941 253 61 7 1 200 260 512 6.68e-71 224
Msa1389450 AT5G18610.3 54.941 253 61 7 1 200 260 512 6.68e-71 224
Msa1389450 AT5G02800.1 79.439 107 22 0 1 107 250 356 1.13e-55 181
Msa1389450 AT3G20530.1 74.510 102 26 0 1 102 260 361 8.60e-53 174
Msa1389450 AT1G07870.1 58.333 144 57 2 1 142 280 422 5.54e-52 172
Msa1389450 AT1G07870.2 58.042 143 57 2 1 141 280 421 1.35e-50 171
Msa1389450 AT2G28590.1 65.421 107 37 0 1 107 275 381 4.59e-46 157
Msa1389450 AT1G61860.1 61.607 112 43 0 1 112 262 373 7.44e-46 155
Msa1389450 AT4G13190.2 63.462 104 38 0 2 105 102 205 3.52e-45 150
Msa1389450 AT4G13190.3 63.462 104 38 0 2 105 102 205 3.52e-45 150
Msa1389450 AT4G13190.5 63.462 104 38 0 2 105 160 263 1.89e-44 150
Msa1389450 AT4G13190.1 63.462 104 38 0 2 105 249 352 9.41e-44 150
Msa1389450 AT3G07070.1 45.213 188 68 3 2 189 257 409 4.85e-43 149
Msa1389450 AT1G20650.1 58.772 114 45 1 1 112 254 367 6.04e-42 145
Msa1389450 AT3G02810.1 60.952 105 41 0 3 107 245 349 6.53e-42 148
Msa1389450 AT5G16500.1 57.798 109 46 0 5 113 256 364 3.26e-39 142
Msa1389450 AT3G24790.1 62.000 100 38 0 2 101 225 324 1.53e-38 136
Msa1389450 AT3G24790.2 62.000 100 38 0 2 101 243 342 1.74e-38 136
Msa1389450 AT1G76370.1 55.238 105 47 0 1 105 251 355 6.70e-37 132
Msa1389450 AT3G28690.1 53.398 103 48 0 1 103 209 311 1.68e-33 123
Msa1389450 AT3G28690.3 53.398 103 48 0 1 103 258 360 2.55e-33 123
Msa1389450 AT3G28690.2 53.398 103 48 0 1 103 309 411 2.65e-33 124
Msa1389450 AT2G20300.1 50.926 108 53 0 1 108 519 626 1.68e-32 123
Msa1389450 AT5G01020.1 54.455 101 46 0 1 101 249 349 2.31e-32 120
Msa1389450 AT5G15080.1 50.485 103 51 0 1 103 325 427 1.17e-30 117
Msa1389450 AT1G54820.1 45.946 111 60 0 2 112 332 442 5.36e-30 115
Msa1389450 AT2G05940.1 43.609 133 71 1 1 133 267 395 6.16e-30 115
Msa1389450 AT4G02010.1 48.980 98 50 0 1 98 558 655 9.89e-30 115
Msa1389450 AT3G01300.1 48.544 103 53 0 1 103 319 421 4.78e-29 112
Msa1389450 AT5G56460.1 47.525 101 53 0 1 101 259 359 4.97e-28 109
Msa1389450 AT3G58690.1 51.020 98 48 0 1 98 266 363 1.14e-27 108
Msa1389450 AT2G28940.1 46.154 104 55 1 2 104 171 274 3.00e-27 106
Msa1389450 AT5G02290.2 47.573 103 54 0 2 104 254 356 5.76e-27 105
Msa1389450 AT5G02290.1 47.573 103 54 0 2 104 254 356 5.76e-27 105
Msa1389450 AT2G28940.2 46.154 104 55 1 2 104 290 393 6.15e-27 106
Msa1389450 AT1G48210.1 51.456 103 49 1 1 103 248 349 2.32e-26 103
Msa1389450 AT1G48210.7 51.456 103 49 1 1 103 248 349 2.32e-26 103
Msa1389450 AT1G48210.2 51.456 103 49 1 1 103 248 349 2.32e-26 103
Msa1389450 AT1G48210.3 51.456 103 49 1 1 103 248 349 2.32e-26 103
Msa1389450 AT1G07570.4 42.500 120 64 1 2 121 138 252 2.63e-26 102
Msa1389450 AT5G35580.1 35.678 199 121 4 1 197 256 449 3.50e-26 105
Msa1389450 AT2G02800.1 43.089 123 67 1 2 124 267 386 3.72e-26 104
Msa1389450 AT2G02800.2 43.089 123 67 1 2 124 267 386 3.72e-26 104
Msa1389450 AT5G35580.2 35.678 199 121 4 1 197 268 461 3.91e-26 104
Msa1389450 AT5G03320.2 33.784 148 96 1 2 147 266 413 5.33e-26 103
Msa1389450 AT5G03320.1 33.784 148 96 1 2 147 266 413 5.33e-26 103
Msa1389450 AT4G22130.2 46.667 105 56 0 1 105 431 535 1.03e-25 103
Msa1389450 AT1G07570.1 43.478 115 60 1 2 116 254 363 1.09e-25 102
Msa1389450 AT1G07570.5 43.478 115 60 1 2 116 254 363 1.09e-25 102
Msa1389450 AT1G07570.2 43.478 115 60 1 2 116 254 363 1.09e-25 102
Msa1389450 AT2G30740.5 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.2 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.10 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.11 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.6 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.15 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.4 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.14 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.7 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.1 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.13 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.8 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.12 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.3 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT2G30740.9 52.475 101 47 1 1 101 253 352 1.32e-25 102
Msa1389450 AT5G56890.1 44.231 104 58 0 1 104 900 1003 1.66e-25 103
Msa1389450 AT4G22130.1 46.667 105 56 0 1 105 572 676 1.82e-25 103
Msa1389450 AT1G07570.3 42.500 120 64 1 2 121 265 379 2.23e-25 102
Msa1389450 AT2G20850.1 45.763 118 63 1 3 120 657 773 2.27e-25 103
Msa1389450 AT2G26290.1 43.363 113 61 1 1 110 268 380 2.46e-25 102
Msa1389450 AT2G43230.1 52.381 105 49 1 1 105 293 396 2.77e-25 101
Msa1389450 AT2G43230.2 52.381 105 49 1 1 105 327 430 3.97e-25 101
Msa1389450 AT1G48220.1 49.524 105 52 1 1 105 249 352 5.81e-25 100
Msa1389450 AT2G07180.1 38.298 141 78 2 1 132 270 410 6.13e-25 101
Msa1389450 AT2G07180.2 38.298 141 78 2 1 132 270 410 6.13e-25 101
Msa1389450 AT1G68690.1 45.536 112 56 2 2 110 550 659 7.37e-25 101
Msa1389450 AT1G68690.3 45.536 112 56 2 2 110 550 659 7.37e-25 101
Msa1389450 AT1G68690.2 45.536 112 56 2 2 110 550 659 7.37e-25 101
Msa1389450 AT3G59350.2 52.475 101 47 1 1 101 253 352 7.45e-25 100
Msa1389450 AT2G17220.2 43.000 100 57 0 2 101 270 369 1.05e-24 100
Msa1389450 AT2G17220.1 43.000 100 57 0 2 101 271 370 1.07e-24 100
Msa1389450 AT3G59350.3 52.475 101 47 1 1 101 295 394 1.23e-24 100
Msa1389450 AT3G59350.1 52.475 101 47 1 1 101 295 394 1.23e-24 100
Msa1389450 AT3G59350.6 52.475 101 47 1 1 101 310 409 1.40e-24 100
Msa1389450 AT2G28930.2 46.000 100 54 0 2 101 255 354 1.53e-24 99.8
Msa1389450 AT2G39110.1 42.453 106 61 0 2 107 276 381 1.54e-24 100
Msa1389450 AT1G53730.1 49.438 89 45 0 1 89 590 678 1.57e-24 100
Msa1389450 AT2G39110.2 42.453 106 61 0 2 107 261 366 1.71e-24 99.8
Msa1389450 AT2G28930.3 46.000 100 54 0 2 101 258 357 1.72e-24 99.8
Msa1389450 AT2G28930.1 46.000 100 54 0 2 101 266 365 2.03e-24 99.4
Msa1389450 AT1G06700.1 52.475 101 47 1 1 101 250 349 3.83e-24 98.2
Msa1389450 AT1G06700.3 52.475 101 47 1 1 101 250 349 3.83e-24 98.2
Msa1389450 AT1G06700.2 52.475 101 47 1 1 101 250 349 3.83e-24 98.2
Msa1389450 AT3G62220.1 52.427 103 48 1 1 103 249 350 6.57e-24 97.4
Msa1389450 AT3G62220.3 52.427 103 48 1 1 103 249 350 6.57e-24 97.4
Msa1389450 AT3G62220.2 52.427 103 48 1 1 103 156 257 7.08e-24 95.9
Msa1389450 AT1G14370.1 45.192 104 57 0 2 105 270 373 1.09e-23 97.4
Msa1389450 AT1G76360.1 43.000 100 57 0 2 101 347 446 1.19e-23 97.8
Msa1389450 AT3G14350.1 50.562 89 44 0 1 89 593 681 1.44e-23 97.8
Msa1389450 AT3G09830.2 38.000 150 82 2 2 147 269 411 1.77e-23 97.1
Msa1389450 AT3G09830.3 38.000 150 82 2 2 147 269 411 1.77e-23 97.1
Msa1389450 AT3G09830.1 38.000 150 82 2 2 147 269 411 1.77e-23 97.1
Msa1389450 AT3G14350.2 50.562 89 44 0 1 89 556 644 1.97e-23 97.4
Msa1389450 AT3G55450.1 47.000 100 53 0 2 101 248 347 1.98e-23 96.3
Msa1389450 AT3G14350.3 50.562 89 44 0 1 89 565 653 1.98e-23 97.4
Msa1389450 AT1G26150.1 44.340 106 56 1 2 104 604 709 2.25e-23 97.4
Msa1389450 AT1G68690.4 46.602 103 51 2 2 101 550 651 2.46e-23 97.4
Msa1389450 AT3G55450.2 47.000 100 53 0 2 101 285 384 3.97e-23 95.9
Msa1389450 AT3G26940.1 42.254 142 72 5 2 134 251 391 4.18e-23 95.9
Msa1389450 AT2G41970.1 50.485 103 50 1 1 103 254 355 4.33e-23 95.1
Msa1389450 AT1G53730.2 48.889 90 45 1 1 89 590 679 5.98e-23 96.3
Msa1389450 AT2G30730.2 48.515 101 51 1 1 101 239 338 7.70e-23 94.4
Msa1389450 AT2G47060.6 51.456 103 49 1 1 103 135 236 7.87e-23 92.4
Msa1389450 AT3G17410.2 50.485 103 50 1 1 103 249 350 7.88e-23 94.4
Msa1389450 AT3G17410.1 50.485 103 50 1 1 103 249 350 7.88e-23 94.4
Msa1389450 AT1G69790.1 46.000 100 54 0 2 101 266 365 9.55e-23 94.4
Msa1389450 AT1G26970.2 44.000 100 56 0 2 101 151 250 1.28e-22 92.8
Msa1389450 AT2G47060.3 51.456 103 49 1 1 103 154 255 1.35e-22 92.4
Msa1389450 AT1G69790.2 46.000 100 54 0 2 101 255 354 1.37e-22 94.0
Msa1389450 AT2G30730.1 48.515 101 51 1 1 101 229 328 1.80e-22 93.2
Msa1389450 AT5G38560.1 39.496 119 69 1 2 117 515 633 1.98e-22 94.7
Msa1389450 AT2G47060.2 51.456 103 49 1 1 103 253 354 2.00e-22 93.6
Msa1389450 AT2G47060.1 51.456 103 49 1 1 103 253 354 2.00e-22 93.6
Msa1389450 AT1G26970.1 44.000 100 56 0 2 101 266 365 2.96e-22 93.6
Msa1389450 AT1G70450.1 38.281 128 76 1 2 126 224 351 3.00e-22 93.2
Msa1389450 AT3G13690.2 41.176 136 77 2 2 137 586 718 3.40e-22 94.0
Msa1389450 AT3G13690.1 41.176 136 77 2 2 137 586 718 3.40e-22 94.0
Msa1389450 AT3G13690.3 41.176 136 77 2 2 137 586 718 3.40e-22 94.0
Msa1389450 AT1G72540.1 43.750 96 54 0 3 98 266 361 4.89e-22 93.2
Msa1389450 AT1G70460.1 37.984 129 77 1 2 127 527 655 8.03e-22 92.8
Msa1389450 AT1G55200.3 41.463 123 69 2 2 122 554 675 8.24e-22 92.8
Msa1389450 AT1G55200.4 41.463 123 69 2 2 122 554 675 8.24e-22 92.8
Msa1389450 AT1G55200.1 41.463 123 69 2 2 122 554 675 8.24e-22 92.8
Msa1389450 AT1G55200.2 41.463 123 69 2 2 122 554 675 8.24e-22 92.8
Msa1389450 AT5G11020.4 44.898 98 54 0 1 98 275 372 8.40e-22 92.0
Msa1389450 AT5G11020.3 44.898 98 54 0 1 98 252 349 9.17e-22 91.7
Msa1389450 AT5G11020.2 44.898 98 54 0 1 98 279 376 1.05e-21 91.7
Msa1389450 AT1G10620.1 40.336 119 68 1 2 117 544 662 1.15e-21 92.4
Msa1389450 AT5G11020.1 44.898 98 54 0 1 98 313 410 1.31e-21 91.7
Msa1389450 AT1G80640.1 42.424 99 54 2 1 98 316 412 1.44e-21 91.7
Msa1389450 AT1G78980.1 46.237 93 50 0 6 98 580 672 1.51e-21 92.0
Msa1389450 AT1G61590.1 41.176 102 60 0 2 103 280 381 1.63e-21 91.3
Msa1389450 AT5G56790.1 46.392 97 51 1 2 98 565 660 1.93e-21 91.7
Msa1389450 AT1G23540.1 38.760 129 76 1 2 127 545 673 2.21e-21 91.7
Msa1389450 AT3G13065.1 45.361 97 53 0 6 102 591 687 2.70e-21 91.3
Msa1389450 AT1G74490.1 43.299 97 54 1 2 98 269 364 3.30e-21 90.5
Msa1389450 AT4G03390.2 46.392 97 52 0 2 98 663 759 4.11e-21 90.9
Msa1389450 AT4G03390.1 46.392 97 52 0 2 98 663 759 4.11e-21 90.9
Msa1389450 AT3G59350.4 58.571 70 28 1 1 70 295 363 5.59e-21 89.4
Msa1389450 AT2G47060.4 40.741 135 47 3 1 103 253 386 7.43e-21 89.4
Msa1389450 AT1G11130.1 41.414 99 58 0 3 101 669 767 9.08e-21 90.1
Msa1389450 AT1G11130.2 41.414 99 58 0 3 101 591 689 1.17e-20 89.7
Msa1389450 AT1G24030.6 43.564 101 56 1 2 101 151 251 3.53e-20 85.9
Msa1389450 AT2G39660.1 35.211 142 83 1 2 134 253 394 4.13e-20 87.4
Msa1389450 AT1G24030.3 43.564 101 56 1 2 101 188 288 4.66e-20 86.3
Msa1389450 AT4G32000.2 45.098 102 56 0 1 102 303 404 5.09e-20 87.0
Msa1389450 AT4G32000.3 45.098 102 56 0 1 102 345 446 5.21e-20 87.4
Msa1389450 AT4G32000.1 45.098 102 56 0 1 102 302 403 5.47e-20 87.0
Msa1389450 AT1G24030.2 43.564 101 56 1 2 101 242 342 8.99e-20 85.9
Msa1389450 AT1G54820.2 51.389 72 35 0 2 73 332 403 9.59e-20 86.3
Msa1389450 AT2G25220.5 43.137 102 58 0 1 102 270 371 1.18e-19 85.9
Msa1389450 AT1G24030.1 43.564 101 56 1 2 101 256 356 1.21e-19 85.9
Msa1389450 AT5G47070.1 38.462 104 64 0 2 105 269 372 1.75e-19 85.5
Msa1389450 AT2G25220.1 43.137 102 58 0 1 102 319 420 1.88e-19 85.9
Msa1389450 AT3G08760.3 35.849 106 68 0 3 108 357 462 1.95e-19 85.9
Msa1389450 AT3G08760.1 35.849 106 68 0 3 108 357 462 1.95e-19 85.9
Msa1389450 AT3G08760.2 35.849 106 68 0 3 108 357 462 1.95e-19 85.9
Msa1389450 AT2G25220.2 43.137 102 58 0 1 102 324 425 2.42e-19 85.5
Msa1389450 AT4G34500.1 42.268 97 55 1 2 98 323 418 6.24e-19 84.3
Msa1389450 AT4G01330.1 40.206 97 57 1 2 98 338 433 9.65e-19 84.0
Msa1389450 AT4G01330.2 40.206 97 57 1 2 98 338 433 9.77e-19 84.0
Msa1389450 AT4G01330.3 40.206 97 57 1 2 98 338 433 1.73e-18 83.2
Msa1389450 AT4G26540.1 44.898 98 51 2 4 99 943 1039 1.93e-18 83.2
Msa1389450 AT1G01540.2 39.175 97 58 1 2 98 330 425 4.17e-18 82.0
Msa1389450 AT4G13190.4 76.596 47 11 0 2 48 249 295 4.45e-18 80.5
Msa1389450 AT3G20530.2 79.545 44 9 0 1 44 260 303 5.86e-18 80.5
Msa1389450 AT3G24550.1 42.000 100 55 1 2 98 454 553 8.79e-18 81.3
Msa1389450 AT4G17660.1 31.356 118 78 1 1 118 271 385 2.78e-17 79.3
Msa1389450 AT4G35600.2 35.000 100 65 0 2 101 270 369 3.25e-17 79.3
Msa1389450 AT4G35600.1 35.000 100 65 0 2 101 269 368 3.40e-17 79.3
Msa1389450 AT5G63940.1 42.857 98 55 1 1 98 537 633 4.02e-17 79.3
Msa1389450 AT5G18910.1 39.796 98 54 2 1 98 365 457 4.52e-17 79.0
Msa1389450 AT3G24540.1 43.000 100 54 1 2 98 357 456 5.47e-17 79.0
Msa1389450 AT4G02630.1 41.237 97 56 1 2 98 339 434 7.42e-17 78.6
Msa1389450 AT1G66460.3 40.816 98 56 2 3 98 341 438 1.13e-16 77.8
Msa1389450 AT1G66460.1 40.816 98 56 2 3 98 314 411 1.39e-16 77.8
Msa1389450 AT1G56720.3 43.299 97 54 1 2 98 355 450 1.63e-16 77.4
Msa1389450 AT1G56720.1 43.299 97 54 1 2 98 355 450 1.63e-16 77.4
Msa1389450 AT1G56720.2 43.299 97 54 1 2 98 355 450 1.63e-16 77.4
Msa1389450 AT1G56720.4 43.299 97 54 1 2 98 355 450 1.63e-16 77.4
Msa1389450 AT3G59110.1 43.299 97 54 1 2 98 366 461 1.63e-16 77.4
Msa1389450 AT2G42960.3 43.299 97 54 1 2 98 359 454 1.94e-16 77.4
Msa1389450 AT2G42960.5 43.299 97 54 1 2 98 359 454 1.94e-16 77.4
Msa1389450 AT2G42960.4 43.299 97 54 1 2 98 359 454 1.94e-16 77.4
Msa1389450 AT2G42960.1 43.299 97 54 1 2 98 359 454 1.94e-16 77.4
Msa1389450 AT2G16750.2 36.735 98 61 1 1 98 449 545 2.92e-16 76.6
Msa1389450 AT2G16750.1 36.735 98 61 1 1 98 449 545 2.92e-16 76.6
Msa1389450 AT5G56040.2 40.206 97 55 2 4 98 942 1037 3.55e-16 76.6
Msa1389450 AT1G77280.2 42.000 100 55 3 1 98 579 677 4.79e-16 76.3
Msa1389450 AT1G77280.1 42.000 100 55 3 1 98 579 677 4.79e-16 76.3
Msa1389450 AT5G11410.2 36.275 102 65 0 1 102 141 242 5.34e-16 74.3
Msa1389450 AT2G39360.1 36.937 111 68 2 4 113 665 774 6.24e-16 75.9
Msa1389450 AT1G21590.1 36.735 98 61 1 1 98 584 680 6.89e-16 75.9
Msa1389450 AT5G11410.1 36.275 102 65 0 1 102 231 332 7.71e-16 74.7
Msa1389450 AT1G09440.1 42.268 97 55 1 2 98 333 428 9.83e-16 75.1
Msa1389450 AT1G09440.2 42.268 97 55 1 2 98 333 428 9.83e-16 75.1
Msa1389450 AT5G06820.1 38.053 113 70 0 3 115 596 708 1.26e-15 75.1
Msa1389450 AT1G52290.1 39.216 102 56 3 2 98 317 417 1.45e-15 74.7
Msa1389450 AT4G34440.2 43.000 100 53 2 2 98 486 584 1.51e-15 74.7
Msa1389450 AT4G34440.1 43.000 100 53 2 2 98 486 584 1.51e-15 74.7
Msa1389450 AT3G05140.2 39.796 98 54 2 1 98 365 457 1.76e-15 74.3
Msa1389450 AT1G21590.2 36.735 98 61 1 1 98 544 640 1.78e-15 74.7
Msa1389450 AT3G05140.1 39.796 98 54 2 1 98 317 409 1.91e-15 74.3
Msa1389450 AT5G37790.1 41.414 99 54 3 3 98 396 493 2.71e-15 73.9
Msa1389450 AT3G19300.1 34.266 143 76 2 1 143 502 626 3.42e-15 73.6
Msa1389450 AT5G02070.1 38.835 103 59 2 4 103 547 648 3.54e-15 73.6
Msa1389450 AT3G45920.1 35.714 98 60 2 1 98 56 150 4.66e-15 70.9
Msa1389450 AT3G46340.1 39.175 97 56 2 2 98 762 855 5.32e-15 73.2
Msa1389450 AT5G35960.1 40.659 91 49 2 8 98 314 399 5.46e-15 72.8
Msa1389450 AT5G48740.1 40.708 113 57 2 2 106 783 893 8.02e-15 72.8
Msa1389450 AT1G30570.1 36.538 104 64 2 4 107 697 798 1.15e-14 72.4
Msa1389450 AT3G46420.1 39.175 97 56 2 2 98 707 800 1.44e-14 72.0
Msa1389450 AT4G35030.9 37.755 98 60 1 1 98 140 236 1.84e-14 70.9
Msa1389450 AT4G35030.7 37.755 98 60 1 1 98 281 377 2.17e-14 71.2
Msa1389450 AT4G35030.3 37.755 98 60 1 1 98 281 377 2.17e-14 71.2
Msa1389450 AT4G35030.6 37.755 98 60 1 1 98 281 377 2.17e-14 71.2
Msa1389450 AT4G35030.5 37.755 98 60 1 1 98 281 377 2.17e-14 71.2
Msa1389450 AT1G78530.1 39.216 102 59 2 2 101 247 347 2.25e-14 70.9
Msa1389450 AT3G23750.1 35.577 104 66 1 2 104 757 860 2.39e-14 71.2
Msa1389450 AT5G57670.2 33.333 99 61 2 1 99 442 535 2.60e-14 71.2
Msa1389450 AT5G18500.2 39.175 97 58 1 2 98 342 437 3.01e-14 70.9
Msa1389450 AT5G18500.5 39.175 97 58 1 2 98 342 437 3.01e-14 70.9
Msa1389450 AT5G18500.4 39.175 97 58 1 2 98 342 437 3.01e-14 70.9
Msa1389450 AT5G18500.1 39.175 97 58 1 2 98 342 437 3.01e-14 70.9
Msa1389450 AT5G18500.3 39.175 97 58 1 2 98 342 437 3.01e-14 70.9
Msa1389450 AT5G18500.6 39.175 97 58 1 2 98 342 437 3.01e-14 70.9
Msa1389450 AT2G28250.2 39.806 103 60 2 1 101 393 495 3.41e-14 70.9
Msa1389450 AT2G28250.5 39.806 103 60 2 1 101 393 495 3.41e-14 70.9
Msa1389450 AT2G28250.4 39.806 103 60 2 1 101 393 495 3.41e-14 70.9
Msa1389450 AT2G28250.1 39.806 103 60 2 1 101 393 495 3.41e-14 70.9
Msa1389450 AT2G28250.6 39.806 103 60 2 1 101 393 495 3.41e-14 70.9
Msa1389450 AT2G28250.3 39.806 103 60 2 1 101 393 495 3.41e-14 70.9
Msa1389450 AT2G18470.1 39.000 100 57 2 2 98 458 556 3.83e-14 70.9
Msa1389450 AT2G18470.3 39.000 100 57 2 2 98 458 556 3.83e-14 70.9
Msa1389450 AT2G18470.2 39.000 100 57 2 2 98 458 556 3.83e-14 70.9
Msa1389450 AT2G23200.1 31.373 153 75 4 2 126 663 813 3.88e-14 70.9
Msa1389450 AT5G35960.2 40.230 87 47 2 8 94 314 395 4.51e-14 70.1
Msa1389450 AT3G46330.1 31.496 127 80 3 1 127 742 861 5.79e-14 70.1
Msa1389450 AT3G46330.2 31.496 127 80 3 1 127 718 837 6.52e-14 70.1
Msa1389450 AT5G65530.1 34.694 98 60 2 1 98 319 412 7.82e-14 69.7
Msa1389450 AT4G35030.2 39.362 94 56 1 1 94 281 373 7.86e-14 69.3
Msa1389450 AT5G10520.1 35.714 98 59 2 1 98 328 421 8.71e-14 69.3
Msa1389450 AT1G52540.2 37.079 89 55 1 10 98 220 307 8.98e-14 68.9
Msa1389450 AT1G49100.1 39.000 100 54 3 2 99 757 851 8.98e-14 69.7
Msa1389450 AT1G52540.1 33.929 112 70 2 10 118 223 333 9.19e-14 68.9
Msa1389450 AT3G59420.1 42.553 94 51 2 5 98 695 785 9.80e-14 69.7
Msa1389450 AT1G75820.1 42.424 99 46 4 8 99 874 968 9.85e-14 69.7
Msa1389450 AT1G48210.5 69.767 43 13 0 1 43 248 290 1.26e-13 68.6
Msa1389450 AT1G48210.4 69.767 43 13 0 1 43 248 290 1.26e-13 68.6
Msa1389450 AT1G48210.6 69.767 43 13 0 1 43 248 290 1.26e-13 68.6
Msa1389450 AT4G32710.1 45.000 100 52 1 2 98 566 665 1.27e-13 69.3
Msa1389450 AT4G32000.4 39.024 82 50 0 21 102 302 383 1.62e-13 68.6
Msa1389450 AT2G47060.5 69.767 43 13 0 1 43 253 295 1.67e-13 68.2
Msa1389450 AT1G07560.1 39.394 99 53 3 2 98 743 836 1.81e-13 68.9
Msa1389450 AT2G28590.2 70.455 44 13 0 1 44 275 318 2.47e-13 67.8
Msa1389450 AT4G23190.3 34.615 104 60 3 1 99 447 547 4.17e-13 67.8
Msa1389450 AT4G23190.4 34.615 104 60 3 1 99 447 547 4.17e-13 67.8
Msa1389450 AT3G46410.1 35.052 97 60 2 2 98 160 253 4.26e-13 66.6
Msa1389450 AT2G21480.1 39.175 97 58 1 4 100 701 796 4.72e-13 67.4
Msa1389450 AT3G46355.1 37.374 99 55 3 2 98 160 253 4.89e-13 66.6
Msa1389450 AT4G20270.1 42.105 95 48 4 8 99 894 984 5.01e-13 67.4
Msa1389450 AT4G23190.1 34.615 104 60 3 1 99 525 625 5.51e-13 67.4
Msa1389450 AT5G65700.1 43.878 98 41 5 8 99 877 966 5.62e-13 67.4
Msa1389450 AT5G65700.2 43.878 98 41 5 8 99 877 966 5.62e-13 67.4
Msa1389450 AT2G18890.1 35.165 91 54 2 8 98 252 337 6.48e-13 67.0
Msa1389450 AT1G49730.1 34.375 128 76 2 1 125 533 655 6.53e-13 67.0
Msa1389450 AT3G45860.1 35.644 101 62 2 1 99 526 625 7.78e-13 67.0
Msa1389450 AT3G17420.1 38.144 97 59 1 2 98 330 425 8.31e-13 66.6
Msa1389450 AT4G29450.1 36.170 94 59 1 5 98 756 848 9.70e-13 66.6
Msa1389450 AT4G23240.2 36.735 98 60 2 3 99 205 301 1.05e-12 66.2
Msa1389450 AT1G66150.1 34.951 103 65 2 1 101 766 868 1.09e-12 66.6
Msa1389450 AT4G23140.1 36.364 99 62 1 1 99 526 623 1.20e-12 66.2
Msa1389450 AT2G02220.1 33.333 93 61 1 6 98 914 1005 1.39e-12 66.2
Msa1389450 AT1G71830.1 37.374 99 59 2 2 98 479 576 1.39e-12 66.2
Msa1389450 AT3G46400.1 35.052 97 60 2 2 98 752 845 1.40e-12 66.2
Msa1389450 AT1G67720.1 34.737 95 61 1 4 98 783 876 1.51e-12 66.2
Msa1389450 AT1G24650.1 37.778 90 55 1 1 89 725 814 1.54e-12 66.2
Msa1389450 AT4G23180.1 34.343 99 64 1 1 99 523 620 1.79e-12 65.9
Msa1389450 AT4G39110.1 39.394 99 55 2 4 100 702 797 1.87e-12 65.9
Msa1389450 AT1G51850.2 33.077 130 69 4 2 129 754 867 2.04e-12 65.9
Msa1389450 AT1G51850.1 33.077 130 69 4 2 129 734 847 2.05e-12 65.9
Msa1389450 AT4G23140.2 36.364 99 62 1 1 99 532 629 2.13e-12 65.5
Msa1389450 AT4G23240.1 36.735 98 60 2 3 99 512 608 2.20e-12 65.5
Msa1389450 AT1G11330.2 35.354 99 63 1 1 99 699 796 2.42e-12 65.5
Msa1389450 AT3G18810.1 41.000 100 55 2 2 98 511 609 2.45e-12 65.5
Msa1389450 AT1G11330.1 35.354 99 63 1 1 99 697 794 2.52e-12 65.5
Msa1389450 AT2G01820.1 34.579 107 67 2 1 104 763 869 2.54e-12 65.5
Msa1389450 AT5G45780.2 31.250 128 83 3 2 125 433 559 2.98e-12 65.1
Msa1389450 AT2G13800.4 35.354 99 61 2 2 98 335 432 3.10e-12 65.1
Msa1389450 AT2G13800.2 35.354 99 61 2 2 98 335 432 3.10e-12 65.1
Msa1389450 AT2G13790.1 35.354 99 61 2 2 98 471 568 3.16e-12 65.1
Msa1389450 AT2G13800.3 35.354 99 61 2 2 98 452 549 3.58e-12 65.1
Msa1389450 AT2G13800.1 35.354 99 61 2 2 98 452 549 3.58e-12 65.1
Msa1389450 AT4G05200.1 33.673 98 64 1 1 98 522 618 3.62e-12 65.1
Msa1389450 AT1G56120.3 40.404 99 57 2 1 99 717 813 3.67e-12 65.1
Msa1389450 AT1G56120.1 35.075 134 72 3 1 121 883 1014 3.96e-12 65.1
Msa1389450 AT4G05200.2 33.673 98 64 1 1 98 540 636 4.08e-12 64.7
Msa1389450 AT3G13380.1 35.780 109 66 3 6 113 1040 1145 4.13e-12 64.7
Msa1389450 AT4G29180.2 36.082 97 61 1 2 98 755 850 4.14e-12 64.7
Msa1389450 AT4G23160.1 36.364 99 62 1 1 99 534 631 4.14e-12 64.7
Msa1389450 AT4G29180.3 36.082 97 61 1 2 98 752 847 4.38e-12 64.7
Msa1389450 AT5G45780.1 31.250 128 83 3 2 125 476 602 4.44e-12 64.7
Msa1389450 AT1G56120.2 40.404 99 57 2 1 99 865 961 4.91e-12 64.7
Msa1389450 AT5G48940.1 29.851 134 86 3 4 135 973 1100 4.97e-12 64.7
Msa1389450 AT3G04690.1 36.364 99 58 2 4 100 694 789 5.14e-12 64.7
Msa1389450 AT3G46290.1 31.469 143 83 3 4 132 662 803 5.36e-12 64.3
Msa1389450 AT1G21270.1 37.624 101 60 2 2 101 579 677 5.64e-12 64.3
Msa1389450 AT4G21390.1 35.714 98 61 2 1 98 704 799 6.09e-12 64.3
Msa1389450 AT4G29180.1 36.082 97 61 1 2 98 753 848 6.11e-12 64.3
Msa1389450 AT2G28970.1 33.871 124 65 4 2 123 655 763 7.12e-12 63.9
Msa1389450 AT4G23270.3 36.275 102 59 3 1 99 501 599 7.29e-12 63.9
Msa1389450 AT4G11460.2 34.694 98 62 2 3 99 448 544 7.43e-12 63.9
Msa1389450 AT3G21630.1 36.441 118 67 4 3 115 490 604 8.15e-12 63.9
Msa1389450 AT5G61350.1 32.759 116 77 1 4 119 707 821 8.24e-12 63.9
Msa1389450 AT5G54380.1 35.185 108 68 2 4 111 687 792 8.58e-12 63.9
Msa1389450 AT2G28970.2 33.871 124 65 4 2 123 620 728 8.61e-12 63.9
Msa1389450 AT4G23270.2 36.275 102 59 3 1 99 501 599 8.72e-12 63.9
Msa1389450 AT4G23270.1 36.275 102 59 3 1 99 501 599 8.72e-12 63.9
Msa1389450 AT1G34210.1 35.354 99 61 2 2 98 482 579 8.92e-12 63.9
Msa1389450 AT1G34210.2 35.354 99 61 2 2 98 482 579 8.92e-12 63.9
Msa1389450 AT3G51550.1 35.052 97 62 1 4 100 714 809 9.87e-12 63.5
Msa1389450 AT1G51805.2 34.694 98 61 1 2 99 729 823 1.78e-11 63.2
Msa1389450 AT1G51805.1 34.694 98 61 1 2 99 753 847 1.82e-11 62.8
Msa1389450 AT4G11460.3 34.694 98 62 2 3 99 523 619 2.03e-11 62.8
Msa1389450 AT4G11460.1 34.694 98 62 2 3 99 526 622 2.09e-11 62.8
Msa1389450 AT1G51790.2 37.374 99 55 3 2 98 803 896 2.12e-11 62.8
Msa1389450 AT1G51830.1 37.000 100 56 3 2 99 562 656 2.66e-11 62.4
Msa1389450 AT4G33430.1 36.364 99 60 2 2 98 466 563 2.84e-11 62.4
Msa1389450 AT1G51830.2 37.000 100 56 3 2 99 569 663 2.93e-11 62.4
Msa1389450 AT5G38990.1 35.577 104 65 2 5 108 708 809 3.04e-11 62.4
Msa1389450 AT1G55610.1 37.647 85 51 2 6 89 1042 1125 3.10e-11 62.4
Msa1389450 AT1G55610.2 37.647 85 51 2 6 89 1042 1125 3.10e-11 62.4
Msa1389450 AT1G51800.1 33.333 111 71 2 2 112 761 868 3.16e-11 62.4
Msa1389450 AT5G60080.1 38.298 94 58 0 5 98 262 355 3.25e-11 62.0
Msa1389450 AT1G51860.1 35.238 105 51 2 2 99 759 853 3.47e-11 62.0
Msa1389450 AT1G51860.2 35.238 105 51 2 2 99 615 709 3.77e-11 62.0
Msa1389450 AT4G33430.2 36.364 99 60 2 2 98 513 610 3.88e-11 62.0
Msa1389450 AT1G51790.3 37.374 99 55 3 2 98 751 844 4.35e-11 62.0
Msa1389450 AT1G51790.1 37.374 99 55 3 2 98 751 844 4.35e-11 62.0
Msa1389450 AT2G32800.1 35.714 98 62 1 2 98 715 812 4.53e-11 61.6
Msa1389450 AT1G51820.1 34.454 119 65 5 2 117 754 862 4.65e-11 61.6
Msa1389450 AT2G25220.4 43.836 73 41 0 1 73 270 342 4.82e-11 61.2
Msa1389450 AT2G28960.1 35.354 99 57 3 2 98 617 710 6.16e-11 61.2
Msa1389450 AT2G25220.3 43.836 73 41 0 1 73 319 391 6.19e-11 61.2
Msa1389450 AT1G51880.2 35.052 97 60 2 2 98 759 852 6.30e-11 61.2
Msa1389450 AT1G21245.1 31.683 101 68 1 2 102 16 115 6.32e-11 58.9
Msa1389450 AT1G72300.1 31.731 104 70 1 6 109 983 1085 6.37e-11 61.2
Msa1389450 AT1G51880.3 34.694 98 61 2 2 99 767 861 6.94e-11 61.2
Msa1389450 AT1G51820.2 34.454 119 65 5 2 117 492 600 7.35e-11 61.2
Msa1389450 AT2G28960.2 35.354 99 57 3 2 98 749 842 7.89e-11 61.2
Msa1389450 AT1G51880.1 35.052 97 60 2 2 98 741 834 7.95e-11 61.2

Find 56 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTAGTATTGGTAATAATA+AGG 0.218294 tig0021283:+38601 Msa1389450:CDS
ATCTGGACGCAGATGGGATT+TGG 0.296807 tig0021283:+38694 Msa1389450:CDS
CAGCTGCACGTCCTCTGATT+GGG 0.336408 tig0021283:+38525 Msa1389450:CDS
ATTACCAATACTAGCATTGT+TGG 0.370012 tig0021283:-38594 None:intergenic
GGGTGCTGTCAATGGCTTTA+CGG 0.372233 tig0021283:-38239 None:intergenic
GCAGCTGCACGTCCTCTGAT+TGG 0.372558 tig0021283:+38524 Msa1389450:CDS
AAACTGCAAGGATGTTAAAC+AGG 0.383375 tig0021283:+38747 Msa1389450:CDS
TAAGTTCTCTCCCCACATCT+TGG 0.389245 tig0021283:-38801 None:intergenic
AAATCTGATGTATATAGTTT+TGG 0.393095 tig0021283:+38189 Msa1389450:CDS
AATGATGAAGGTGGAGGATC+TGG 0.394843 tig0021283:+38677 Msa1389450:CDS
GCTAGTATTGGTAATAATAA+GGG 0.411249 tig0021283:+38602 Msa1389450:CDS
GTTGGCAGATCCACGGTTGC+AGG 0.417499 tig0021283:+38436 Msa1389450:CDS
AAAAGGAATAGAGATGATAA+AGG 0.420320 tig0021283:+38638 Msa1389450:CDS
ATTGGTAATAATAAGGGAAC+TGG 0.436919 tig0021283:+38608 Msa1389450:CDS
AGGGAACTGGTGATGAGAAA+AGG 0.449710 tig0021283:+38621 Msa1389450:CDS
CCTCTCTTATCTTGCCAACC+AGG 0.458312 tig0021283:+38562 Msa1389450:CDS
ACGTCCTCTGATTGGGGATG+TGG 0.478672 tig0021283:+38532 Msa1389450:CDS
ATCAATGTGCATTCAAGAGC+AGG 0.488918 tig0021283:+38502 Msa1389450:CDS
CATTGTTGGTATCATGTGCC+TGG 0.495269 tig0021283:-38580 None:intergenic
AGCTTGGTAAAGACCTCGCA+TGG 0.502610 tig0021283:-38468 None:intergenic
CAGATCCACGGTTGCAGGGG+CGG 0.505591 tig0021283:+38441 Msa1389450:CDS
TTGGCAGATCCACGGTTGCA+GGG 0.515788 tig0021283:+38437 Msa1389450:CDS
GGATACCGCCCCTGCAACCG+TGG 0.518541 tig0021283:-38446 None:intergenic
GTGGAGGATCTGGACGCAGA+TGG 0.521870 tig0021283:+38687 Msa1389450:CDS
GATACCAACAATGCTAGTAT+TGG 0.533699 tig0021283:+38590 Msa1389450:CDS
AACATCCTTGCAGTTTCACG+TGG 0.545882 tig0021283:-38740 None:intergenic
AGCTGCACGTCCTCTGATTG+GGG 0.552145 tig0021283:+38526 Msa1389450:CDS
GCTCCTGAATATGCTATGAC+TGG 0.559515 tig0021283:+38153 None:intergenic
GTTGGTATCATGTGCCTGGT+TGG 0.560955 tig0021283:-38576 None:intergenic
AGGAATAGAGATGATAAAGG+TGG 0.567057 tig0021283:+38641 Msa1389450:CDS
AAAAGACGACAGAGTGTGCA+GGG 0.567616 tig0021283:+38830 Msa1389450:CDS
CTGTGGCTGAAGCCAAGATG+TGG 0.572037 tig0021283:+38789 Msa1389450:CDS
TTGATGCCACAGCTAGAGCT+TGG 0.574912 tig0021283:-38484 None:intergenic
TGGAGGATCTGGACGCAGAT+GGG 0.577557 tig0021283:+38688 Msa1389450:CDS
TGGCAGATCCACGGTTGCAG+GGG 0.578430 tig0021283:+38438 Msa1389450:CDS
TTTCAAAGTTGGCAGATCCA+CGG 0.587145 tig0021283:+38429 Msa1389450:CDS
CCAACTTTGAAAACTTCCTA+CGG 0.593941 tig0021283:-38418 None:intergenic
GAGAACAAAACCTTGTCACA+TGG 0.619753 tig0021283:+38271 Msa1389450:CDS
GGACGCAGATGGGATTTGGA+AGG 0.621906 tig0021283:+38698 Msa1389450:CDS
TGTGGCTGAAGCCAAGATGT+GGG 0.622784 tig0021283:+38790 Msa1389450:CDS
ACTCCCCACGTGAAACTGCA+AGG 0.623653 tig0021283:+38735 Msa1389450:CDS
CAGGGGCGGTATCCCATGCG+AGG 0.628493 tig0021283:+38455 Msa1389450:CDS
AGAACAAAACCTTGTCACAT+GGG 0.636864 tig0021283:+38272 Msa1389450:CDS
CTGGTTGGCAAGATAAGAGA+GGG 0.641965 tig0021283:-38561 None:intergenic
GGCCTTTGTTCAATGACCGT+AGG 0.649761 tig0021283:+38402 Msa1389450:CDS
CATCCTTGCAGTTTCACGTG+GGG 0.650511 tig0021283:-38738 None:intergenic
GTCACCACATCCCCAATCAG+AGG 0.652036 tig0021283:-38536 None:intergenic
ACATCCTTGCAGTTTCACGT+GGG 0.654677 tig0021283:-38739 None:intergenic
CCTGGTTGGCAAGATAAGAG+AGG 0.655544 tig0021283:-38562 None:intergenic
AACTGCAAGGATGTTAAACA+GGG 0.668835 tig0021283:+38748 Msa1389450:CDS
TTCCTACGGTCATTGAACAA+AGG 0.674248 tig0021283:-38404 None:intergenic
TCTTGATAGAGAACGTGCTG+TGG 0.675482 tig0021283:+38772 Msa1389450:CDS
TCTTTACCAAGCTCTAGCTG+TGG 0.677203 tig0021283:+38478 Msa1389450:CDS
GCTTGGTAAAGACCTCGCAT+GGG 0.680358 tig0021283:-38467 None:intergenic
ATAGAACTACCCATGTGACA+AGG 0.696537 tig0021283:-38281 None:intergenic
GTGGCTGAAGCCAAGATGTG+GGG 0.723442 tig0021283:+38791 Msa1389450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAACTTAAAATGAC+AGG - tig0021283:38315-38334 None:intergenic 15.0%
!! AGAATATTAAAAAATGATGA+AGG + tig0021283:38665-38684 Msa1389450:CDS 15.0%
!!! AAATCTGATGTATATAGTTT+TGG + tig0021283:38189-38208 Msa1389450:CDS 20.0%
!! ATATTAAAAAATGATGAAGG+TGG + tig0021283:38668-38687 Msa1389450:CDS 20.0%
!!! TGCTAGTATTGGTAATAATA+AGG + tig0021283:38601-38620 Msa1389450:CDS 25.0%
!!! GCTAGTATTGGTAATAATAA+GGG + tig0021283:38602-38621 Msa1389450:CDS 25.0%
! AAAAGGAATAGAGATGATAA+AGG + tig0021283:38638-38657 Msa1389450:CDS 25.0%
!!! TAGTTTTGGTGTAGTCTTTT+TGG + tig0021283:38203-38222 Msa1389450:CDS 30.0%
AACTTATGATCGCATAACAA+TGG + tig0021283:38343-38362 Msa1389450:intron 30.0%
ATTACCAATACTAGCATTGT+TGG - tig0021283:38597-38616 None:intergenic 30.0%
! ATTGGTAATAATAAGGGAAC+TGG + tig0021283:38608-38627 Msa1389450:CDS 30.0%
TTAAAAAATGATGAAGGTGG+AGG + tig0021283:38671-38690 Msa1389450:CDS 30.0%
!!! GTCTTTTTGGAGCTAATTAC+TGG + tig0021283:38216-38235 Msa1389450:CDS 35.0%
AGAACAAAACCTTGTCACAT+GGG + tig0021283:38272-38291 Msa1389450:CDS 35.0%
GCATAACAATGGAGTGATAA+TGG + tig0021283:38354-38373 Msa1389450:intron 35.0%
!! TAACAATGGAGTGATAATGG+TGG + tig0021283:38357-38376 Msa1389450:intron 35.0%
!! GTGGTTTCATATTTTTGAGC+AGG + tig0021283:38376-38395 Msa1389450:intron 35.0%
!! TTCATATTTTTGAGCAGGCA+CGG + tig0021283:38381-38400 Msa1389450:intron 35.0%
! CCAACTTTGAAAACTTCCTA+CGG - tig0021283:38421-38440 None:intergenic 35.0%
GATACCAACAATGCTAGTAT+TGG + tig0021283:38590-38609 Msa1389450:CDS 35.0%
AGGAATAGAGATGATAAAGG+TGG + tig0021283:38641-38660 Msa1389450:CDS 35.0%
AAACTGCAAGGATGTTAAAC+AGG + tig0021283:38747-38766 Msa1389450:CDS 35.0%
AACTGCAAGGATGTTAAACA+GGG + tig0021283:38748-38767 Msa1389450:CDS 35.0%
!!! ACAAGGTTTTGTTCTCCATG+GGG - tig0021283:38267-38286 None:intergenic 40.0%
!!! GACAAGGTTTTGTTCTCCAT+GGG - tig0021283:38268-38287 None:intergenic 40.0%
!!! TGACAAGGTTTTGTTCTCCA+TGG - tig0021283:38269-38288 None:intergenic 40.0%
GAGAACAAAACCTTGTCACA+TGG + tig0021283:38271-38290 Msa1389450:CDS 40.0%
ATAGAACTACCCATGTGACA+AGG - tig0021283:38284-38303 None:intergenic 40.0%
TTCCTACGGTCATTGAACAA+AGG - tig0021283:38407-38426 None:intergenic 40.0%
! CCGTAGGAAGTTTTCAAAGT+TGG + tig0021283:38418-38437 Msa1389450:CDS 40.0%
TTTCAAAGTTGGCAGATCCA+CGG + tig0021283:38429-38448 Msa1389450:CDS 40.0%
ATCAATGTGCATTCAAGAGC+AGG + tig0021283:38502-38521 Msa1389450:CDS 40.0%
!!! CAAGGTTTTGTTCTCCATGG+GGG - tig0021283:38266-38285 None:intergenic 45.0%
! TCTTTACCAAGCTCTAGCTG+TGG + tig0021283:38478-38497 Msa1389450:CDS 45.0%
CTGGTTGGCAAGATAAGAGA+GGG - tig0021283:38564-38583 None:intergenic 45.0%
CATTGTTGGTATCATGTGCC+TGG - tig0021283:38583-38602 None:intergenic 45.0%
! AGGGAACTGGTGATGAGAAA+AGG + tig0021283:38621-38640 Msa1389450:CDS 45.0%
AATGATGAAGGTGGAGGATC+TGG + tig0021283:38677-38696 Msa1389450:CDS 45.0%
ACATCCTTGCAGTTTCACGT+GGG - tig0021283:38742-38761 None:intergenic 45.0%
AACATCCTTGCAGTTTCACG+TGG - tig0021283:38743-38762 None:intergenic 45.0%
TCTTGATAGAGAACGTGCTG+TGG + tig0021283:38772-38791 Msa1389450:CDS 45.0%
TAAGTTCTCTCCCCACATCT+TGG - tig0021283:38804-38823 None:intergenic 45.0%
AAAAAGACGACAGAGTGTGC+AGG + tig0021283:38829-38848 Msa1389450:CDS 45.0%
AAAAGACGACAGAGTGTGCA+GGG + tig0021283:38830-38849 Msa1389450:CDS 45.0%
! GGGTGCTGTCAATGGCTTTA+CGG - tig0021283:38242-38261 None:intergenic 50.0%
GGCCTTTGTTCAATGACCGT+AGG + tig0021283:38402-38421 Msa1389450:CDS 50.0%
GCTTGGTAAAGACCTCGCAT+GGG - tig0021283:38470-38489 None:intergenic 50.0%
AGCTTGGTAAAGACCTCGCA+TGG - tig0021283:38471-38490 None:intergenic 50.0%
TTGATGCCACAGCTAGAGCT+TGG - tig0021283:38487-38506 None:intergenic 50.0%
CCTGGTTGGCAAGATAAGAG+AGG - tig0021283:38565-38584 None:intergenic 50.0%
CCTCTCTTATCTTGCCAACC+AGG + tig0021283:38562-38581 Msa1389450:CDS 50.0%
GTTGGTATCATGTGCCTGGT+TGG - tig0021283:38579-38598 None:intergenic 50.0%
ATCTGGACGCAGATGGGATT+TGG + tig0021283:38694-38713 Msa1389450:CDS 50.0%
CATCCTTGCAGTTTCACGTG+GGG - tig0021283:38741-38760 None:intergenic 50.0%
TGTGGCTGAAGCCAAGATGT+GGG + tig0021283:38790-38809 Msa1389450:CDS 50.0%
!! GTTTTGTTCTCCATGGGGGC+GGG - tig0021283:38262-38281 None:intergenic 55.0%
!!! GGTTTTGTTCTCCATGGGGG+CGG - tig0021283:38263-38282 None:intergenic 55.0%
TTGGCAGATCCACGGTTGCA+GGG + tig0021283:38437-38456 Msa1389450:CDS 55.0%
CAGCTGCACGTCCTCTGATT+GGG + tig0021283:38525-38544 Msa1389450:CDS 55.0%
AGCTGCACGTCCTCTGATTG+GGG + tig0021283:38526-38545 Msa1389450:CDS 55.0%
ACGTCCTCTGATTGGGGATG+TGG + tig0021283:38532-38551 Msa1389450:CDS 55.0%
GTCACCACATCCCCAATCAG+AGG - tig0021283:38539-38558 None:intergenic 55.0%
TGGAGGATCTGGACGCAGAT+GGG + tig0021283:38688-38707 Msa1389450:CDS 55.0%
GGACGCAGATGGGATTTGGA+AGG + tig0021283:38698-38717 Msa1389450:CDS 55.0%
ACTCCCCACGTGAAACTGCA+AGG + tig0021283:38735-38754 Msa1389450:CDS 55.0%
CTGTGGCTGAAGCCAAGATG+TGG + tig0021283:38789-38808 Msa1389450:CDS 55.0%
GTGGCTGAAGCCAAGATGTG+GGG + tig0021283:38791-38810 Msa1389450:CDS 55.0%
GTTGGCAGATCCACGGTTGC+AGG + tig0021283:38436-38455 Msa1389450:CDS 60.0%
TGGCAGATCCACGGTTGCAG+GGG + tig0021283:38438-38457 Msa1389450:CDS 60.0%
GCAGCTGCACGTCCTCTGAT+TGG + tig0021283:38524-38543 Msa1389450:CDS 60.0%
GTGGAGGATCTGGACGCAGA+TGG + tig0021283:38687-38706 Msa1389450:CDS 60.0%
! ATGGGGGCGGGTGCTGTCAA+TGG - tig0021283:38250-38269 None:intergenic 65.0%
ATTGACAGCACCCGCCCCCA+TGG + tig0021283:38249-38268 Msa1389450:CDS 65.0%
CAGATCCACGGTTGCAGGGG+CGG + tig0021283:38441-38460 Msa1389450:CDS 65.0%
GGATACCGCCCCTGCAACCG+TGG - tig0021283:38449-38468 None:intergenic 70.0%
CAGGGGCGGTATCCCATGCG+AGG + tig0021283:38455-38474 Msa1389450:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0021283 gene 38168 38877 38168 ID=Msa1389450;Name=Msa1389450
tig0021283 mRNA 38168 38877 38168 ID=Msa1389450-mRNA-1;Parent=Msa1389450;Name=Msa1389450-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|1|1|2|0|201
tig0021283 exon 38168 38293 38168 ID=Msa1389450-mRNA-1:exon:11635;Parent=Msa1389450-mRNA-1
tig0021283 exon 38398 38877 38398 ID=Msa1389450-mRNA-1:exon:11636;Parent=Msa1389450-mRNA-1
tig0021283 CDS 38168 38293 38168 ID=Msa1389450-mRNA-1:cds;Parent=Msa1389450-mRNA-1
tig0021283 CDS 38398 38877 38398 ID=Msa1389450-mRNA-1:cds;Parent=Msa1389450-mRNA-1
Gene Sequence

>Msa1389450

ATGACTGGACAACTGACTGTAAAATCTGATGTATATAGTTTTGGTGTAGTCTTTTTGGAGCTAATTACTGGCCGTAAAGCCATTGACAGCACCCGCCCCCATGGAGAACAAAACCTTGTCACATGGGCACGGCCTTTGTTCAATGACCGTAGGAAGTTTTCAAAGTTGGCAGATCCACGGTTGCAGGGGCGGTATCCCATGCGAGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAGCAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTGACTGCCCTCTCTTATCTTGCCAACCAGGCACATGATACCAACAATGCTAGTATTGGTAATAATAAGGGAACTGGTGATGAGAAAAGGAATAGAGATGATAAAGGTGGAAGAATATTAAAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTAAGAGAAAAAAGACGACAGAGTGTGCAGGGCAGTTTTGACGCTTCTAATGCCTAG
Protein sequence

>Msa1389450

MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAHDTNNASIGNNKGTGDEKRNRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLREKRRQSVQGSFDASNA*