AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406940 MtrunA17_Chr4g0055851 93.929 280 9 3 1 272 1 280 0.0 530
Msa1406940 MtrunA17_Chr5g0399491 70.805 298 54 9 2 271 1 293 6.89e-134 380
Msa1406940 MtrunA17_Chr8g0335131 58.528 299 78 11 3 258 1 296 7.86e-88 263
Msa1406940 MtrunA17_Chr7g0258831 65.054 186 55 2 51 227 89 273 8.72e-73 224
Msa1406940 MtrunA17_Chr1g0175651 60.000 205 64 5 50 242 82 280 3.53e-69 216
Msa1406940 MtrunA17_Chr2g0308611 74.000 150 35 2 92 238 176 324 1.00e-67 213
Msa1406940 MtrunA17_Chr4g0054421 75.573 131 31 1 96 226 110 239 6.11e-63 199
Msa1406940 MtrunA17_Chr5g0400781 71.774 124 34 1 104 227 114 236 2.36e-58 187
Msa1406940 MtrunA17_Chr1g0151971 61.151 139 44 3 112 241 129 266 2.36e-52 172
Msa1406940 MtrunA17_Chr4g0044091 62.097 124 42 1 107 225 59 182 2.52e-46 154
Msa1406940 MtrunA17_Chr2g0299031 45.714 175 95 0 69 243 38 212 1.02e-42 145
Msa1406940 MtrunA17_Chr3g0135331 53.896 154 64 3 104 257 136 282 6.76e-41 143
Msa1406940 MtrunA17_Chr4g0071411 58.333 120 47 1 115 231 90 209 9.78e-39 135
Msa1406940 MtrunA17_Chr7g0217111 39.241 158 87 2 54 202 16 173 1.61e-23 96.7
Msa1406940 MtrunA17_Chr8g0362151 40.496 121 69 1 82 199 43 163 3.06e-21 90.5
Msa1406940 MtrunA17_Chr4g0060031 47.748 111 51 1 95 198 77 187 1.22e-20 89.7
Msa1406940 MtrunA17_Chr6g0453021 48.000 100 51 1 102 200 84 183 1.78e-20 88.2
Msa1406940 MtrunA17_Chr6g0450991 42.149 121 69 1 109 229 63 182 3.76e-20 87.8
Msa1406940 MtrunA17_Chr3g0119291 46.667 105 49 1 103 200 49 153 4.08e-20 87.0
Msa1406940 MtrunA17_Chr8g0381741 50.505 99 42 1 109 200 50 148 1.70e-19 86.3
Msa1406940 MtrunA17_Chr5g0416391 45.000 100 54 1 101 200 66 164 5.17e-19 84.3
Msa1406940 MtrunA17_Chr5g0415941 45.690 116 55 2 97 205 71 185 6.07e-19 84.7
Msa1406940 MtrunA17_Chr3g0123691 41.406 128 67 2 105 224 52 179 1.99e-18 83.2
Msa1406940 MtrunA17_Chr7g0265521 45.455 88 48 0 113 200 63 150 2.27e-18 81.6
Msa1406940 MtrunA17_Chr1g0179581 46.988 83 44 0 113 195 28 110 1.46e-17 76.3
Msa1406940 MtrunA17_Chr8g0362751 46.809 94 43 1 113 199 89 182 3.21e-17 79.7
Msa1406940 MtrunA17_Chr3g0127511 44.086 93 45 1 116 201 41 133 9.00e-14 69.3
Msa1406940 MtrunA17_Chr5g0410711 33.333 141 93 1 58 198 38 177 9.66e-14 70.9
Msa1406940 MtrunA17_Chr8g0346251 42.683 82 47 0 117 198 45 126 2.60e-13 68.2
Msa1406940 MtrunA17_Chr5g0403691 42.342 111 62 1 99 207 39 149 3.40e-13 67.4
Msa1406940 MtrunA17_Chr5g0403701 42.202 109 58 1 99 207 39 142 4.38e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406940 AT4G16780.1 60.690 290 85 6 2 271 1 281 3.41e-101 297
Msa1406940 AT5G47370.1 60.137 291 56 12 2 258 1 265 3.37e-95 281
Msa1406940 AT4G17460.1 57.047 298 81 11 2 271 1 279 6.54e-94 278
Msa1406940 AT3G60390.1 64.255 235 57 6 49 260 75 305 1.25e-88 266
Msa1406940 AT2G44910.1 61.277 235 54 6 18 227 55 277 1.24e-82 251
Msa1406940 AT5G06710.1 59.091 198 63 4 73 255 135 329 2.83e-68 215
Msa1406940 AT4G37790.1 76.423 123 28 1 104 226 117 238 2.73e-61 195
Msa1406940 AT2G22800.1 71.875 128 32 2 102 226 99 225 3.43e-58 187
Msa1406940 AT2G01430.1 52.326 172 65 4 74 234 95 260 6.31e-46 155
Msa1406940 AT1G70920.1 57.480 127 43 2 104 227 57 175 5.72e-37 130
Msa1406940 AT1G70920.2 57.480 127 46 1 101 227 27 145 5.81e-37 129
Msa1406940 AT5G06710.4 56.075 107 32 2 73 164 135 241 3.42e-27 106
Msa1406940 AT1G69780.1 44.444 126 65 1 80 200 47 172 1.20e-23 97.8
Msa1406940 AT2G01430.2 50.505 99 38 2 74 164 95 190 9.83e-21 88.2
Msa1406940 AT1G26960.1 46.875 96 51 0 105 200 63 158 7.35e-20 86.7
Msa1406940 AT5G65310.2 34.225 187 104 5 91 270 33 207 2.21e-19 85.9
Msa1406940 AT5G65310.1 34.225 187 104 5 91 270 51 225 2.28e-19 86.3
Msa1406940 AT3G01470.1 47.312 93 42 1 113 198 68 160 6.22e-18 81.6
Msa1406940 AT3G01220.1 42.857 119 60 4 91 202 63 180 1.62e-17 80.9
Msa1406940 AT5G15150.1 38.710 124 68 2 78 200 86 202 2.35e-17 80.9
Msa1406940 AT5G03790.1 46.067 89 48 0 113 201 77 165 2.80e-17 79.3
Msa1406940 AT4G40060.1 45.361 97 46 1 111 200 57 153 1.03e-16 78.6
Msa1406940 AT2G22430.1 46.875 96 47 1 111 202 60 155 1.95e-16 78.2
Msa1406940 AT1G27045.4 38.849 139 66 3 76 201 31 163 3.46e-16 76.6
Msa1406940 AT1G27045.1 43.119 109 50 2 76 178 31 133 4.51e-16 75.9
Msa1406940 AT1G27045.2 57.576 66 28 0 113 178 17 82 4.79e-16 74.3
Msa1406940 AT1G27045.5 57.576 66 28 0 113 178 25 90 5.00e-16 74.7
Msa1406940 AT1G27045.3 57.576 66 28 0 113 178 25 90 5.00e-16 74.7
Msa1406940 AT2G46680.2 36.508 126 71 1 116 241 35 151 6.93e-16 75.9
Msa1406940 AT2G46680.1 36.508 126 73 1 116 241 35 153 7.41e-16 75.9
Msa1406940 AT5G03790.2 43.956 91 51 0 113 203 77 167 1.13e-14 71.2
Msa1406940 AT2G36610.1 38.776 98 52 1 112 201 70 167 4.60e-14 69.3
Msa1406940 AT4G36740.1 37.624 101 63 0 99 199 41 141 1.38e-13 68.6
Msa1406940 AT4G36740.2 37.624 101 63 0 99 199 42 142 1.39e-13 68.6
Msa1406940 AT3G61890.1 42.169 83 48 0 116 198 33 115 4.20e-13 67.8
Msa1406940 AT2G18550.1 36.885 122 74 1 113 231 61 182 6.47e-13 66.6
Msa1406940 AT5G53980.1 43.678 87 49 0 113 199 11 97 2.45e-11 61.2

Find 98 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGATTAATTACGGGATTA+AGG 0.204975 tig0023248:-12918 None:intergenic
CAAACCTAGCTCTTCTGTTT+TGG 0.228150 tig0023248:-13084 None:intergenic
AATATGGGCGAATTATTATT+AGG 0.246186 tig0023248:-13811 None:intergenic
CCCAATAAAACAAATAATAA+TGG 0.259210 tig0023248:-13649 None:intergenic
AATGAGAAAGAAGGTGGTTT+TGG 0.279116 tig0023248:-12232 None:intergenic
AAAATCTAACGGAGGAAAAT+AGG 0.298194 tig0023248:+13234 Msa1406940:CDS
GTTTGAAGAATTTGTGAGTT+TGG 0.302380 tig0023248:-12280 None:intergenic
CCCCTGCTTCTTCTTCCTCT+TGG 0.308178 tig0023248:-12711 None:intergenic
CTTCTCCTCCAGTTACAAAT+AGG 0.309301 tig0023248:+13462 Msa1406940:CDS
GGTCATTGTAACGAGGAAAT+AGG 0.323532 tig0023248:+13532 Msa1406940:three_prime_UTR
AATCATGTGCTAGAATATTA+TGG 0.345031 tig0023248:+13577 Msa1406940:three_prime_UTR
TTAATTAATTAATCATGTAT+AGG 0.345768 tig0023248:+13773 Msa1406940:three_prime_UTR
CATCCTCGGGCTGTGCCTAT+AGG 0.371086 tig0023248:+13428 Msa1406940:CDS
TCCATCCAAACCTTCACTTC+AGG 0.379090 tig0023248:+12403 Msa1406940:CDS
TCAAACATCCTATTTGTAAC+TGG 0.383429 tig0023248:-13470 None:intergenic
TAGATTAATTACGGGATTAA+GGG 0.388703 tig0023248:-12917 None:intergenic
ATCTAACCGTCACCATTCTA+TGG 0.389555 tig0023248:+13397 Msa1406940:CDS
GTCTATGATAAGCCTTGAAA+TGG 0.390587 tig0023248:-13724 None:intergenic
TAATTAATCATGTATAGGTT+TGG 0.395361 tig0023248:+13778 Msa1406940:three_prime_UTR
GCACAGCCCGAGGATGGGCT+TGG 0.401813 tig0023248:-13421 None:intergenic
ACATAAAAGCTTTATGATGA+TGG 0.403801 tig0023248:+12306 Msa1406940:exon
AATAGAAAGGAGAAGGAAAT+GGG 0.404331 tig0023248:-12174 None:intergenic
TTTCTTCAAGAATAGCTGAT+TGG 0.405030 tig0023248:-12876 None:intergenic
AGCACAGTTTCAAGTGTTAG+TGG 0.413647 tig0023248:+12748 Msa1406940:CDS
CTTTATGATGATGGTTGAAA+AGG 0.413968 tig0023248:+12315 Msa1406940:exon
ACACTTGAAACTGTGCTGTT+TGG 0.414647 tig0023248:-12742 None:intergenic
TGGGAGGAAGCGTGTGGAAG+GGG 0.416577 tig0023248:-12201 None:intergenic
CCAATAAAACAAATAATAAT+GGG 0.424829 tig0023248:-13648 None:intergenic
GAAGAAGCCCATGGGCCTAT+AGG 0.425417 tig0023248:-13443 None:intergenic
AAATAGAAAGGAGAAGGAAA+TGG 0.426500 tig0023248:-12175 None:intergenic
CACAGCCCGAGGATGGGCTT+GGG 0.426678 tig0023248:-13420 None:intergenic
TACGAGGAATCGACGTGAAT+CGG 0.436608 tig0023248:+12665 Msa1406940:CDS
AGAAGGAAATGGGGTGGGAG+TGG 0.440235 tig0023248:-12164 None:intergenic
GCATCAACACAAGCATTAGA+TGG 0.449100 tig0023248:-13374 None:intergenic
TGGCATTCAATAGCTGTAGA+TGG 0.450684 tig0023248:-12691 None:intergenic
AACCAGACTTCTACTTGTCT+TGG 0.452242 tig0023248:-13061 None:intergenic
AGTGGGAGGAAGCGTGTGGA+AGG 0.455168 tig0023248:-12203 None:intergenic
GAAGAATTTGTGAGTTTGGA+GGG 0.455308 tig0023248:-12276 None:intergenic
CTATGGCCCAAGCCCATCCT+CGG 0.455411 tig0023248:+13414 Msa1406940:CDS
GCATACCTGAAGTGAAGGTT+TGG 0.458056 tig0023248:-12408 None:intergenic
TAAAACGCCGTGATCATTGA+CGG 0.467131 tig0023248:-13499 None:intergenic
GGGCTGTGCCTATAGGCCCA+TGG 0.472141 tig0023248:+13435 Msa1406940:CDS
TCCTCGTACAGATCGAAACT+TGG 0.477132 tig0023248:+12612 Msa1406940:intron
TCATTTGCATGTAAAATTGT+GGG 0.480628 tig0023248:-13301 None:intergenic
TTGGCACTTGCAAAGCAACT+TGG 0.482027 tig0023248:+13031 Msa1406940:CDS
GGGCACATAGTAAGAGTAGT+TGG 0.484138 tig0023248:-13329 None:intergenic
CTATAGGCACAGCCCGAGGA+TGG 0.486518 tig0023248:-13427 None:intergenic
GTGGGAGGAAGCGTGTGGAA+GGG 0.487609 tig0023248:-12202 None:intergenic
GTCCAAGACAAGTAGAAGTC+TGG 0.488744 tig0023248:+13059 Msa1406940:CDS
TGAAGAATTTGTGAGTTTGG+AGG 0.493265 tig0023248:-12277 None:intergenic
TGCCAAGAGGAAGAAGAAGC+AGG 0.500256 tig0023248:+12709 Msa1406940:CDS
GATCATGACGTGGAAAATAG+AGG 0.505863 tig0023248:+12793 Msa1406940:CDS
ATGGTTGAAAAGGAAGACTT+GGG 0.522362 tig0023248:+12325 Msa1406940:CDS
TTGATTGTGAAGTGTTGAAA+AGG 0.523538 tig0023248:+13204 Msa1406940:CDS
GGGATTAAATAGAAAGGAGA+AGG 0.524012 tig0023248:-12181 None:intergenic
GAAAGTGAGAATGAGAAAGA+AGG 0.525037 tig0023248:-12241 None:intergenic
GATGGGCTTGGGCCATAGAA+TGG 0.526314 tig0023248:-13409 None:intergenic
GTGAAGGTTTGGATGGAAGA+TGG 0.529221 tig0023248:-12397 None:intergenic
ACCTGAAGTGAAGGTTTGGA+TGG 0.537166 tig0023248:-12404 None:intergenic
TATAGGCACAGCCCGAGGAT+GGG 0.537378 tig0023248:-13426 None:intergenic
TATGGCCCAAGCCCATCCTC+GGG 0.537951 tig0023248:+13415 Msa1406940:CDS
GTCATTTGCATGTAAAATTG+TGG 0.542757 tig0023248:-13302 None:intergenic
AAGAAGACGCTGAAACTGCT+AGG 0.546613 tig0023248:+12830 Msa1406940:CDS
GATGGTTGAAAAGGAAGACT+TGG 0.551331 tig0023248:+12324 Msa1406940:CDS
GCCAAGAGGAAGAAGAAGCA+GGG 0.554990 tig0023248:+12710 Msa1406940:CDS
AGTGAGAATGAGAAAGAAGG+TGG 0.563836 tig0023248:-12238 None:intergenic
TGGAAGGGGATTAAATAGAA+AGG 0.567982 tig0023248:-12187 None:intergenic
AAAGGAGAAGGAAATGGGGT+GGG 0.568151 tig0023248:-12169 None:intergenic
GAAACATGCAGAGGAGAGAG+TGG 0.568617 tig0023248:+12634 Msa1406940:CDS
GGTTCCAAAACAGAAGAGCT+AGG 0.575953 tig0023248:+13080 Msa1406940:CDS
ACAGCCACACGTTCACAAGA+AGG 0.580372 tig0023248:-13350 None:intergenic
AAAATGCATACCTGAAGTGA+AGG 0.585786 tig0023248:-12413 None:intergenic
CACATAGTAAGAGTAGTTGG+TGG 0.588373 tig0023248:-13326 None:intergenic
GAAAGGAGAAGGAAATGGGG+TGG 0.588683 tig0023248:-12170 None:intergenic
TTGGAGTGGGAGGAAGCGTG+TGG 0.592665 tig0023248:-12207 None:intergenic
CATTTGCATGTAAAATTGTG+GGG 0.595232 tig0023248:-13300 None:intergenic
CAGCCACACGTTCACAAGAA+GGG 0.595325 tig0023248:-13349 None:intergenic
TTTATTGGGTACGACTAGGA+GGG 0.604461 tig0023248:+13663 Msa1406940:three_prime_UTR
TCATGACTTTATGTCAGCAA+TGG 0.605343 tig0023248:-12128 None:intergenic
GGAAAATAGGAGACTACAGA+AGG 0.611602 tig0023248:+13247 Msa1406940:CDS
CTTGGGCCATAGAATGGTGA+CGG 0.617650 tig0023248:-13403 None:intergenic
TGGATGGAAGATGGTTTGTG+AGG 0.618691 tig0023248:-12388 None:intergenic
CCAAGAGGAAGAAGAAGCAG+GGG 0.620587 tig0023248:+12711 Msa1406940:CDS
GTGCCCTTCTTGTGAACGTG+TGG 0.623014 tig0023248:+13346 Msa1406940:CDS
GGAAATAGGTTGTAATAGTG+TGG 0.624802 tig0023248:+13546 Msa1406940:three_prime_UTR
AACATCCTATTTGTAACTGG+AGG 0.628383 tig0023248:-13467 None:intergenic
AAGGTGCTGTGAAAATCTAA+CGG 0.636807 tig0023248:+13223 Msa1406940:CDS
CTGGAGGAGAAGAAGCCCAT+GGG 0.637440 tig0023248:-13451 None:intergenic
ACTGGAGGAGAAGAAGCCCA+TGG 0.637454 tig0023248:-13452 None:intergenic
TACAGCTATTGAATGCCAAG+AGG 0.669451 tig0023248:+12696 Msa1406940:CDS
ATAGAAAGGAGAAGGAAATG+GGG 0.676063 tig0023248:-12173 None:intergenic
CGAAACTTGGAAACATGCAG+AGG 0.684060 tig0023248:+12625 Msa1406940:CDS
GATTCACGTCGATTCCTCGT+AGG 0.688742 tig0023248:-12663 None:intergenic
GACAAAGCTGAAGCAAACAG+AGG 0.702705 tig0023248:+13181 Msa1406940:CDS
GTGATTTGGTCATTGTAACG+AGG 0.706346 tig0023248:+13525 Msa1406940:three_prime_UTR
GTGCTGTGAAAATCTAACGG+AGG 0.721195 tig0023248:+13226 Msa1406940:CDS
GAGAGAAGAAGATCATGACG+TGG 0.729981 tig0023248:+12783 Msa1406940:CDS
GAGAGTGGAAAATACCTACG+AGG 0.764552 tig0023248:+12649 Msa1406940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAATAAAATAATTA+AGG - tig0023248:12962-12981 None:intergenic 0.0%
!! AAAAATTAATAAAATAATTA+AGG - tig0023248:12962-12981 None:intergenic 0.0%
!!! TGTTTATTTTTTTACTAATT+TGG + tig0023248:12982-13001 Msa1406940:intron 10.0%
!!! TTATGATTTGAAATTATTAT+AGG + tig0023248:13159-13178 Msa1406940:intron 10.0%
!! TTAATTAATTAATCATGTAT+AGG + tig0023248:13773-13792 Msa1406940:three_prime_UTR 10.0%
!!! TGTTTATTTTTTTACTAATT+TGG + tig0023248:12982-13001 Msa1406940:intron 10.0%
!!! TTATGATTTGAAATTATTAT+AGG + tig0023248:13159-13178 Msa1406940:intron 10.0%
!! TTAATTAATTAATCATGTAT+AGG + tig0023248:13773-13792 Msa1406940:three_prime_UTR 10.0%
!! GTTGAATTAAAAACTTTAAT+GGG - tig0023248:12563-12582 None:intergenic 15.0%
!! TGTTGAATTAAAAACTTTAA+TGG - tig0023248:12564-12583 None:intergenic 15.0%
!! CCAATAAAACAAATAATAAT+GGG - tig0023248:13651-13670 None:intergenic 15.0%
!!! CCATTATTATTTGTTTTATT+GGG + tig0023248:13649-13668 Msa1406940:three_prime_UTR 15.0%
!! GTTGAATTAAAAACTTTAAT+GGG - tig0023248:12563-12582 None:intergenic 15.0%
!! TGTTGAATTAAAAACTTTAA+TGG - tig0023248:12564-12583 None:intergenic 15.0%
!! CCAATAAAACAAATAATAAT+GGG - tig0023248:13651-13670 None:intergenic 15.0%
!!! CCATTATTATTTGTTTTATT+GGG + tig0023248:13649-13668 Msa1406940:three_prime_UTR 15.0%
!!! ACAAGTATTTTTTTAGATCA+TGG + tig0023248:12458-12477 Msa1406940:intron 20.0%
!! TATTGAGATAGATTAATTAC+GGG - tig0023248:12928-12947 None:intergenic 20.0%
!! GTATTGAGATAGATTAATTA+CGG - tig0023248:12929-12948 None:intergenic 20.0%
!!! AAATAATTAAGGAAGTTGAT+TGG - tig0023248:12951-12970 None:intergenic 20.0%
!!! CCCATTATTATTTGTTTTAT+TGG + tig0023248:13648-13667 Msa1406940:three_prime_UTR 20.0%
!! CCCAATAAAACAAATAATAA+TGG - tig0023248:13652-13671 None:intergenic 20.0%
!! TAATTAATCATGTATAGGTT+TGG + tig0023248:13778-13797 Msa1406940:three_prime_UTR 20.0%
!!! ACAAGTATTTTTTTAGATCA+TGG + tig0023248:12458-12477 Msa1406940:intron 20.0%
!! TATTGAGATAGATTAATTAC+GGG - tig0023248:12928-12947 None:intergenic 20.0%
!! GTATTGAGATAGATTAATTA+CGG - tig0023248:12929-12948 None:intergenic 20.0%
!!! AAATAATTAAGGAAGTTGAT+TGG - tig0023248:12951-12970 None:intergenic 20.0%
!!! CCCATTATTATTTGTTTTAT+TGG + tig0023248:13648-13667 Msa1406940:three_prime_UTR 20.0%
!! CCCAATAAAACAAATAATAA+TGG - tig0023248:13652-13671 None:intergenic 20.0%
!! TAATTAATCATGTATAGGTT+TGG + tig0023248:13778-13797 Msa1406940:three_prime_UTR 20.0%
!! CATCATAAAGCTTTTATGTT+TGG - tig0023248:12305-12324 None:intergenic 25.0%
!! ACATAAAAGCTTTATGATGA+TGG + tig0023248:12306-12325 Msa1406940:exon 25.0%
! GATCTAAAAAAATACTTGTG+TGG - tig0023248:12457-12476 None:intergenic 25.0%
! TAGATTAATTACGGGATTAA+GGG - tig0023248:12920-12939 None:intergenic 25.0%
! ATAGATTAATTACGGGATTA+AGG - tig0023248:12921-12940 None:intergenic 25.0%
!!! TTTTGTTTAGAAGCAAAAGT+TGG + tig0023248:13012-13031 Msa1406940:intron 25.0%
! TCATTTGCATGTAAAATTGT+GGG - tig0023248:13304-13323 None:intergenic 25.0%
! AATCATGTGCTAGAATATTA+TGG + tig0023248:13577-13596 Msa1406940:three_prime_UTR 25.0%
!! CATCATAAAGCTTTTATGTT+TGG - tig0023248:12305-12324 None:intergenic 25.0%
!! ACATAAAAGCTTTATGATGA+TGG + tig0023248:12306-12325 Msa1406940:exon 25.0%
! GATCTAAAAAAATACTTGTG+TGG - tig0023248:12457-12476 None:intergenic 25.0%
! TAGATTAATTACGGGATTAA+GGG - tig0023248:12920-12939 None:intergenic 25.0%
! ATAGATTAATTACGGGATTA+AGG - tig0023248:12921-12940 None:intergenic 25.0%
!!! TTTTGTTTAGAAGCAAAAGT+TGG + tig0023248:13012-13031 Msa1406940:intron 25.0%
! TCATTTGCATGTAAAATTGT+GGG - tig0023248:13304-13323 None:intergenic 25.0%
! AATCATGTGCTAGAATATTA+TGG + tig0023248:13577-13596 Msa1406940:three_prime_UTR 25.0%
AATAGAAAGGAGAAGGAAAT+GGG - tig0023248:12177-12196 None:intergenic 30.0%
AAATAGAAAGGAGAAGGAAA+TGG - tig0023248:12178-12197 None:intergenic 30.0%
GTTTGAAGAATTTGTGAGTT+TGG - tig0023248:12283-12302 None:intergenic 30.0%
!! CTTTATGATGATGGTTGAAA+AGG + tig0023248:12315-12334 Msa1406940:exon 30.0%
TTTCTTCAAGAATAGCTGAT+TGG - tig0023248:12879-12898 None:intergenic 30.0%
!! TTGATTGTGAAGTGTTGAAA+AGG + tig0023248:13204-13223 Msa1406940:CDS 30.0%
AAAATCTAACGGAGGAAAAT+AGG + tig0023248:13234-13253 Msa1406940:CDS 30.0%
CATTTGCATGTAAAATTGTG+GGG - tig0023248:13303-13322 None:intergenic 30.0%
GTCATTTGCATGTAAAATTG+TGG - tig0023248:13305-13324 None:intergenic 30.0%
TCAAACATCCTATTTGTAAC+TGG - tig0023248:13473-13492 None:intergenic 30.0%
!!! GACTTACTTTTTCCATTTCA+AGG + tig0023248:13712-13731 Msa1406940:intron 30.0%
AATAGAAAGGAGAAGGAAAT+GGG - tig0023248:12177-12196 None:intergenic 30.0%
AAATAGAAAGGAGAAGGAAA+TGG - tig0023248:12178-12197 None:intergenic 30.0%
GTTTGAAGAATTTGTGAGTT+TGG - tig0023248:12283-12302 None:intergenic 30.0%
!! CTTTATGATGATGGTTGAAA+AGG + tig0023248:12315-12334 Msa1406940:exon 30.0%
TTTCTTCAAGAATAGCTGAT+TGG - tig0023248:12879-12898 None:intergenic 30.0%
!! TTGATTGTGAAGTGTTGAAA+AGG + tig0023248:13204-13223 Msa1406940:CDS 30.0%
AAAATCTAACGGAGGAAAAT+AGG + tig0023248:13234-13253 Msa1406940:CDS 30.0%
CATTTGCATGTAAAATTGTG+GGG - tig0023248:13303-13322 None:intergenic 30.0%
GTCATTTGCATGTAAAATTG+TGG - tig0023248:13305-13324 None:intergenic 30.0%
TCAAACATCCTATTTGTAAC+TGG - tig0023248:13473-13492 None:intergenic 30.0%
!!! GACTTACTTTTTCCATTTCA+AGG + tig0023248:13712-13731 Msa1406940:intron 30.0%
TCATGACTTTATGTCAGCAA+TGG - tig0023248:12131-12150 None:intergenic 35.0%
ATAGAAAGGAGAAGGAAATG+GGG - tig0023248:12176-12195 None:intergenic 35.0%
GGGATTAAATAGAAAGGAGA+AGG - tig0023248:12184-12203 None:intergenic 35.0%
TGGAAGGGGATTAAATAGAA+AGG - tig0023248:12190-12209 None:intergenic 35.0%
!!! AAAGAAGGTGGTTTTGGTTT+TGG - tig0023248:12229-12248 None:intergenic 35.0%
! AATGAGAAAGAAGGTGGTTT+TGG - tig0023248:12235-12254 None:intergenic 35.0%
GAAAGTGAGAATGAGAAAGA+AGG - tig0023248:12244-12263 None:intergenic 35.0%
GAAGAATTTGTGAGTTTGGA+GGG - tig0023248:12279-12298 None:intergenic 35.0%
TGAAGAATTTGTGAGTTTGG+AGG - tig0023248:12280-12299 None:intergenic 35.0%
ATGGTTGAAAAGGAAGACTT+GGG + tig0023248:12325-12344 Msa1406940:CDS 35.0%
AAAATGCATACCTGAAGTGA+AGG - tig0023248:12416-12435 None:intergenic 35.0%
TTAGCATTTCGTAGTTATCC+TGG - tig0023248:12491-12510 None:intergenic 35.0%
CTGACAATACTGAAATCGTT+AGG - tig0023248:12521-12540 None:intergenic 35.0%
TCAGTATTGTCAGTTGAGTT+AGG + tig0023248:12528-12547 Msa1406940:intron 35.0%
!! AAGGTGCTGTGAAAATCTAA+CGG + tig0023248:13223-13242 Msa1406940:CDS 35.0%
AACATCCTATTTGTAACTGG+AGG - tig0023248:13470-13489 None:intergenic 35.0%
! ATGTTTTCCGTCAATGATCA+CGG + tig0023248:13492-13511 Msa1406940:exon 35.0%
GGAAATAGGTTGTAATAGTG+TGG + tig0023248:13546-13565 Msa1406940:three_prime_UTR 35.0%
TGGTGACTAAAAACGTGATT+TGG + tig0023248:13597-13616 Msa1406940:three_prime_UTR 35.0%
! TGACTAAAAACGTGATTTGG+TGG + tig0023248:13600-13619 Msa1406940:three_prime_UTR 35.0%
!! GACTAAAAACGTGATTTGGT+GGG + tig0023248:13601-13620 Msa1406940:three_prime_UTR 35.0%
!! TTGTTTTATTGGGTACGACT+AGG + tig0023248:13659-13678 Msa1406940:three_prime_UTR 35.0%
GTCTATGATAAGCCTTGAAA+TGG - tig0023248:13727-13746 None:intergenic 35.0%
TCATGACTTTATGTCAGCAA+TGG - tig0023248:12131-12150 None:intergenic 35.0%
ATAGAAAGGAGAAGGAAATG+GGG - tig0023248:12176-12195 None:intergenic 35.0%
GGGATTAAATAGAAAGGAGA+AGG - tig0023248:12184-12203 None:intergenic 35.0%
TGGAAGGGGATTAAATAGAA+AGG - tig0023248:12190-12209 None:intergenic 35.0%
!!! AAAGAAGGTGGTTTTGGTTT+TGG - tig0023248:12229-12248 None:intergenic 35.0%
! AATGAGAAAGAAGGTGGTTT+TGG - tig0023248:12235-12254 None:intergenic 35.0%
GAAAGTGAGAATGAGAAAGA+AGG - tig0023248:12244-12263 None:intergenic 35.0%
GAAGAATTTGTGAGTTTGGA+GGG - tig0023248:12279-12298 None:intergenic 35.0%
TGAAGAATTTGTGAGTTTGG+AGG - tig0023248:12280-12299 None:intergenic 35.0%
ATGGTTGAAAAGGAAGACTT+GGG + tig0023248:12325-12344 Msa1406940:CDS 35.0%
AAAATGCATACCTGAAGTGA+AGG - tig0023248:12416-12435 None:intergenic 35.0%
TTAGCATTTCGTAGTTATCC+TGG - tig0023248:12491-12510 None:intergenic 35.0%
CTGACAATACTGAAATCGTT+AGG - tig0023248:12521-12540 None:intergenic 35.0%
TCAGTATTGTCAGTTGAGTT+AGG + tig0023248:12528-12547 Msa1406940:intron 35.0%
!! AAGGTGCTGTGAAAATCTAA+CGG + tig0023248:13223-13242 Msa1406940:CDS 35.0%
AACATCCTATTTGTAACTGG+AGG - tig0023248:13470-13489 None:intergenic 35.0%
! ATGTTTTCCGTCAATGATCA+CGG + tig0023248:13492-13511 Msa1406940:exon 35.0%
GGAAATAGGTTGTAATAGTG+TGG + tig0023248:13546-13565 Msa1406940:three_prime_UTR 35.0%
TGGTGACTAAAAACGTGATT+TGG + tig0023248:13597-13616 Msa1406940:three_prime_UTR 35.0%
! TGACTAAAAACGTGATTTGG+TGG + tig0023248:13600-13619 Msa1406940:three_prime_UTR 35.0%
!! GACTAAAAACGTGATTTGGT+GGG + tig0023248:13601-13620 Msa1406940:three_prime_UTR 35.0%
!! TTGTTTTATTGGGTACGACT+AGG + tig0023248:13659-13678 Msa1406940:three_prime_UTR 35.0%
GTCTATGATAAGCCTTGAAA+TGG - tig0023248:13727-13746 None:intergenic 35.0%
AGTGAGAATGAGAAAGAAGG+TGG - tig0023248:12241-12260 None:intergenic 40.0%
GATGGTTGAAAAGGAAGACT+TGG + tig0023248:12324-12343 Msa1406940:CDS 40.0%
CTTGTGTGGATCTAGAGAAT+GGG - tig0023248:12443-12462 None:intergenic 40.0%
ACTTGTGTGGATCTAGAGAA+TGG - tig0023248:12444-12463 None:intergenic 40.0%
TTAGATCATGGATTCGAACC+AGG + tig0023248:12470-12489 Msa1406940:intron 40.0%
GTCAGTTGAGTTAGGTCTTA+CGG + tig0023248:12536-12555 Msa1406940:intron 40.0%
TGGCATTCAATAGCTGTAGA+TGG - tig0023248:12694-12713 None:intergenic 40.0%
TACAGCTATTGAATGCCAAG+AGG + tig0023248:12696-12715 Msa1406940:CDS 40.0%
! ACACTTGAAACTGTGCTGTT+TGG - tig0023248:12745-12764 None:intergenic 40.0%
! AGCACAGTTTCAAGTGTTAG+TGG + tig0023248:12748-12767 Msa1406940:CDS 40.0%
GATCATGACGTGGAAAATAG+AGG + tig0023248:12793-12812 Msa1406940:CDS 40.0%
AACCAGACTTCTACTTGTCT+TGG - tig0023248:13064-13083 None:intergenic 40.0%
!! CAAACCTAGCTCTTCTGTTT+TGG - tig0023248:13087-13106 None:intergenic 40.0%
GGAAAATAGGAGACTACAGA+AGG + tig0023248:13247-13266 Msa1406940:CDS 40.0%
CACATAGTAAGAGTAGTTGG+TGG - tig0023248:13329-13348 None:intergenic 40.0%
GCATCAACACAAGCATTAGA+TGG - tig0023248:13377-13396 None:intergenic 40.0%
ATCTAACCGTCACCATTCTA+TGG + tig0023248:13397-13416 Msa1406940:CDS 40.0%
CTTCTCCTCCAGTTACAAAT+AGG + tig0023248:13462-13481 Msa1406940:CDS 40.0%
TAAAACGCCGTGATCATTGA+CGG - tig0023248:13502-13521 None:intergenic 40.0%
! TCAATGATCACGGCGTTTTA+AGG + tig0023248:13502-13521 Msa1406940:exon 40.0%
! CAATGATCACGGCGTTTTAA+GGG + tig0023248:13503-13522 Msa1406940:exon 40.0%
!! GTGATTTGGTCATTGTAACG+AGG + tig0023248:13525-13544 Msa1406940:three_prime_UTR 40.0%
GGTCATTGTAACGAGGAAAT+AGG + tig0023248:13532-13551 Msa1406940:three_prime_UTR 40.0%
! TTTTATTGGGTACGACTAGG+AGG + tig0023248:13662-13681 Msa1406940:three_prime_UTR 40.0%
TTTATTGGGTACGACTAGGA+GGG + tig0023248:13663-13682 Msa1406940:three_prime_UTR 40.0%
AGTGAGAATGAGAAAGAAGG+TGG - tig0023248:12241-12260 None:intergenic 40.0%
GATGGTTGAAAAGGAAGACT+TGG + tig0023248:12324-12343 Msa1406940:CDS 40.0%
CTTGTGTGGATCTAGAGAAT+GGG - tig0023248:12443-12462 None:intergenic 40.0%
ACTTGTGTGGATCTAGAGAA+TGG - tig0023248:12444-12463 None:intergenic 40.0%
TTAGATCATGGATTCGAACC+AGG + tig0023248:12470-12489 Msa1406940:intron 40.0%
GTCAGTTGAGTTAGGTCTTA+CGG + tig0023248:12536-12555 Msa1406940:intron 40.0%
TGGCATTCAATAGCTGTAGA+TGG - tig0023248:12694-12713 None:intergenic 40.0%
TACAGCTATTGAATGCCAAG+AGG + tig0023248:12696-12715 Msa1406940:CDS 40.0%
! ACACTTGAAACTGTGCTGTT+TGG - tig0023248:12745-12764 None:intergenic 40.0%
! AGCACAGTTTCAAGTGTTAG+TGG + tig0023248:12748-12767 Msa1406940:CDS 40.0%
GATCATGACGTGGAAAATAG+AGG + tig0023248:12793-12812 Msa1406940:CDS 40.0%
AACCAGACTTCTACTTGTCT+TGG - tig0023248:13064-13083 None:intergenic 40.0%
!! CAAACCTAGCTCTTCTGTTT+TGG - tig0023248:13087-13106 None:intergenic 40.0%
GGAAAATAGGAGACTACAGA+AGG + tig0023248:13247-13266 Msa1406940:CDS 40.0%
CACATAGTAAGAGTAGTTGG+TGG - tig0023248:13329-13348 None:intergenic 40.0%
GCATCAACACAAGCATTAGA+TGG - tig0023248:13377-13396 None:intergenic 40.0%
ATCTAACCGTCACCATTCTA+TGG + tig0023248:13397-13416 Msa1406940:CDS 40.0%
CTTCTCCTCCAGTTACAAAT+AGG + tig0023248:13462-13481 Msa1406940:CDS 40.0%
TAAAACGCCGTGATCATTGA+CGG - tig0023248:13502-13521 None:intergenic 40.0%
! TCAATGATCACGGCGTTTTA+AGG + tig0023248:13502-13521 Msa1406940:exon 40.0%
! CAATGATCACGGCGTTTTAA+GGG + tig0023248:13503-13522 Msa1406940:exon 40.0%
!! GTGATTTGGTCATTGTAACG+AGG + tig0023248:13525-13544 Msa1406940:three_prime_UTR 40.0%
GGTCATTGTAACGAGGAAAT+AGG + tig0023248:13532-13551 Msa1406940:three_prime_UTR 40.0%
! TTTTATTGGGTACGACTAGG+AGG + tig0023248:13662-13681 Msa1406940:three_prime_UTR 40.0%
TTTATTGGGTACGACTAGGA+GGG + tig0023248:13663-13682 Msa1406940:three_prime_UTR 40.0%
AAAGGAGAAGGAAATGGGGT+GGG - tig0023248:12172-12191 None:intergenic 45.0%
!!! GGTGGTTTTGGTTTTGGAGT+GGG - tig0023248:12223-12242 None:intergenic 45.0%
!!! AGGTGGTTTTGGTTTTGGAG+TGG - tig0023248:12224-12243 None:intergenic 45.0%
! TGGATGGAAGATGGTTTGTG+AGG - tig0023248:12391-12410 None:intergenic 45.0%
GTGAAGGTTTGGATGGAAGA+TGG - tig0023248:12400-12419 None:intergenic 45.0%
TCCATCCAAACCTTCACTTC+AGG + tig0023248:12403-12422 Msa1406940:CDS 45.0%
ACCTGAAGTGAAGGTTTGGA+TGG - tig0023248:12407-12426 None:intergenic 45.0%
GCATACCTGAAGTGAAGGTT+TGG - tig0023248:12411-12430 None:intergenic 45.0%
TCCTCGTACAGATCGAAACT+TGG + tig0023248:12612-12631 Msa1406940:intron 45.0%
TCCAAGTTTCGATCTGTACG+AGG - tig0023248:12616-12635 None:intergenic 45.0%
CGAAACTTGGAAACATGCAG+AGG + tig0023248:12625-12644 Msa1406940:CDS 45.0%
GAGAGTGGAAAATACCTACG+AGG + tig0023248:12649-12668 Msa1406940:CDS 45.0%
TACGAGGAATCGACGTGAAT+CGG + tig0023248:12665-12684 Msa1406940:CDS 45.0%
GAGAGAAGAAGATCATGACG+TGG + tig0023248:12783-12802 Msa1406940:CDS 45.0%
AAGAAGACGCTGAAACTGCT+AGG + tig0023248:12830-12849 Msa1406940:CDS 45.0%
TTGGCACTTGCAAAGCAACT+TGG + tig0023248:13031-13050 Msa1406940:CDS 45.0%
GTCCAAGACAAGTAGAAGTC+TGG + tig0023248:13059-13078 Msa1406940:CDS 45.0%
GGTTCCAAAACAGAAGAGCT+AGG + tig0023248:13080-13099 Msa1406940:CDS 45.0%
GACAAAGCTGAAGCAAACAG+AGG + tig0023248:13181-13200 Msa1406940:CDS 45.0%
GTGCTGTGAAAATCTAACGG+AGG + tig0023248:13226-13245 Msa1406940:CDS 45.0%
GGGCACATAGTAAGAGTAGT+TGG - tig0023248:13332-13351 None:intergenic 45.0%
!!! ACGGCGTTTTAAGGGTGATT+TGG + tig0023248:13511-13530 Msa1406940:three_prime_UTR 45.0%
AAAGGAGAAGGAAATGGGGT+GGG - tig0023248:12172-12191 None:intergenic 45.0%
!!! GGTGGTTTTGGTTTTGGAGT+GGG - tig0023248:12223-12242 None:intergenic 45.0%
!!! AGGTGGTTTTGGTTTTGGAG+TGG - tig0023248:12224-12243 None:intergenic 45.0%
! TGGATGGAAGATGGTTTGTG+AGG - tig0023248:12391-12410 None:intergenic 45.0%
GTGAAGGTTTGGATGGAAGA+TGG - tig0023248:12400-12419 None:intergenic 45.0%
TCCATCCAAACCTTCACTTC+AGG + tig0023248:12403-12422 Msa1406940:CDS 45.0%
ACCTGAAGTGAAGGTTTGGA+TGG - tig0023248:12407-12426 None:intergenic 45.0%
GCATACCTGAAGTGAAGGTT+TGG - tig0023248:12411-12430 None:intergenic 45.0%
TCCTCGTACAGATCGAAACT+TGG + tig0023248:12612-12631 Msa1406940:intron 45.0%
TCCAAGTTTCGATCTGTACG+AGG - tig0023248:12616-12635 None:intergenic 45.0%
CGAAACTTGGAAACATGCAG+AGG + tig0023248:12625-12644 Msa1406940:CDS 45.0%
GAGAGTGGAAAATACCTACG+AGG + tig0023248:12649-12668 Msa1406940:CDS 45.0%
TACGAGGAATCGACGTGAAT+CGG + tig0023248:12665-12684 Msa1406940:CDS 45.0%
GAGAGAAGAAGATCATGACG+TGG + tig0023248:12783-12802 Msa1406940:CDS 45.0%
AAGAAGACGCTGAAACTGCT+AGG + tig0023248:12830-12849 Msa1406940:CDS 45.0%
TTGGCACTTGCAAAGCAACT+TGG + tig0023248:13031-13050 Msa1406940:CDS 45.0%
GTCCAAGACAAGTAGAAGTC+TGG + tig0023248:13059-13078 Msa1406940:CDS 45.0%
GGTTCCAAAACAGAAGAGCT+AGG + tig0023248:13080-13099 Msa1406940:CDS 45.0%
GACAAAGCTGAAGCAAACAG+AGG + tig0023248:13181-13200 Msa1406940:CDS 45.0%
GTGCTGTGAAAATCTAACGG+AGG + tig0023248:13226-13245 Msa1406940:CDS 45.0%
GGGCACATAGTAAGAGTAGT+TGG - tig0023248:13332-13351 None:intergenic 45.0%
!!! ACGGCGTTTTAAGGGTGATT+TGG + tig0023248:13511-13530 Msa1406940:three_prime_UTR 45.0%
GAAAGGAGAAGGAAATGGGG+TGG - tig0023248:12173-12192 None:intergenic 50.0%
!!! GGTTTTGGTTTTGGAGTGGG+AGG - tig0023248:12220-12239 None:intergenic 50.0%
GAAACATGCAGAGGAGAGAG+TGG + tig0023248:12634-12653 Msa1406940:CDS 50.0%
!! GATTCACGTCGATTCCTCGT+AGG - tig0023248:12666-12685 None:intergenic 50.0%
TGCCAAGAGGAAGAAGAAGC+AGG + tig0023248:12709-12728 Msa1406940:CDS 50.0%
GCCAAGAGGAAGAAGAAGCA+GGG + tig0023248:12710-12729 Msa1406940:CDS 50.0%
CCAAGAGGAAGAAGAAGCAG+GGG + tig0023248:12711-12730 Msa1406940:CDS 50.0%
CAGCCACACGTTCACAAGAA+GGG - tig0023248:13352-13371 None:intergenic 50.0%
ACAGCCACACGTTCACAAGA+AGG - tig0023248:13353-13372 None:intergenic 50.0%
CTTGGGCCATAGAATGGTGA+CGG - tig0023248:13406-13425 None:intergenic 50.0%
GAAAGGAGAAGGAAATGGGG+TGG - tig0023248:12173-12192 None:intergenic 50.0%
!!! GGTTTTGGTTTTGGAGTGGG+AGG - tig0023248:12220-12239 None:intergenic 50.0%
GAAACATGCAGAGGAGAGAG+TGG + tig0023248:12634-12653 Msa1406940:CDS 50.0%
!! GATTCACGTCGATTCCTCGT+AGG - tig0023248:12666-12685 None:intergenic 50.0%
TGCCAAGAGGAAGAAGAAGC+AGG + tig0023248:12709-12728 Msa1406940:CDS 50.0%
GCCAAGAGGAAGAAGAAGCA+GGG + tig0023248:12710-12729 Msa1406940:CDS 50.0%
CCAAGAGGAAGAAGAAGCAG+GGG + tig0023248:12711-12730 Msa1406940:CDS 50.0%
CAGCCACACGTTCACAAGAA+GGG - tig0023248:13352-13371 None:intergenic 50.0%
ACAGCCACACGTTCACAAGA+AGG - tig0023248:13353-13372 None:intergenic 50.0%
CTTGGGCCATAGAATGGTGA+CGG - tig0023248:13406-13425 None:intergenic 50.0%
AGAAGGAAATGGGGTGGGAG+TGG - tig0023248:12167-12186 None:intergenic 55.0%
CCCCTGCTTCTTCTTCCTCT+TGG - tig0023248:12714-12733 None:intergenic 55.0%
GTGCCCTTCTTGTGAACGTG+TGG + tig0023248:13346-13365 Msa1406940:CDS 55.0%
! GATGGGCTTGGGCCATAGAA+TGG - tig0023248:13412-13431 None:intergenic 55.0%
TATAGGCACAGCCCGAGGAT+GGG - tig0023248:13429-13448 None:intergenic 55.0%
GAAGAAGCCCATGGGCCTAT+AGG - tig0023248:13446-13465 None:intergenic 55.0%
CTGGAGGAGAAGAAGCCCAT+GGG - tig0023248:13454-13473 None:intergenic 55.0%
ACTGGAGGAGAAGAAGCCCA+TGG - tig0023248:13455-13474 None:intergenic 55.0%
AGAAGGAAATGGGGTGGGAG+TGG - tig0023248:12167-12186 None:intergenic 55.0%
CCCCTGCTTCTTCTTCCTCT+TGG - tig0023248:12714-12733 None:intergenic 55.0%
GTGCCCTTCTTGTGAACGTG+TGG + tig0023248:13346-13365 Msa1406940:CDS 55.0%
! GATGGGCTTGGGCCATAGAA+TGG - tig0023248:13412-13431 None:intergenic 55.0%
TATAGGCACAGCCCGAGGAT+GGG - tig0023248:13429-13448 None:intergenic 55.0%
GAAGAAGCCCATGGGCCTAT+AGG - tig0023248:13446-13465 None:intergenic 55.0%
CTGGAGGAGAAGAAGCCCAT+GGG - tig0023248:13454-13473 None:intergenic 55.0%
ACTGGAGGAGAAGAAGCCCA+TGG - tig0023248:13455-13474 None:intergenic 55.0%
! TGGGAGGAAGCGTGTGGAAG+GGG - tig0023248:12204-12223 None:intergenic 60.0%
! GTGGGAGGAAGCGTGTGGAA+GGG - tig0023248:12205-12224 None:intergenic 60.0%
! AGTGGGAGGAAGCGTGTGGA+AGG - tig0023248:12206-12225 None:intergenic 60.0%
! TTGGAGTGGGAGGAAGCGTG+TGG - tig0023248:12210-12229 None:intergenic 60.0%
CTATGGCCCAAGCCCATCCT+CGG + tig0023248:13414-13433 Msa1406940:CDS 60.0%
TATGGCCCAAGCCCATCCTC+GGG + tig0023248:13415-13434 Msa1406940:CDS 60.0%
CTATAGGCACAGCCCGAGGA+TGG - tig0023248:13430-13449 None:intergenic 60.0%
CATCCTCGGGCTGTGCCTAT+AGG + tig0023248:13428-13447 Msa1406940:CDS 60.0%
GGCTGTGCCTATAGGCCCAT+GGG + tig0023248:13436-13455 Msa1406940:CDS 60.0%
! TGGGAGGAAGCGTGTGGAAG+GGG - tig0023248:12204-12223 None:intergenic 60.0%
! GTGGGAGGAAGCGTGTGGAA+GGG - tig0023248:12205-12224 None:intergenic 60.0%
! AGTGGGAGGAAGCGTGTGGA+AGG - tig0023248:12206-12225 None:intergenic 60.0%
! TTGGAGTGGGAGGAAGCGTG+TGG - tig0023248:12210-12229 None:intergenic 60.0%
CTATGGCCCAAGCCCATCCT+CGG + tig0023248:13414-13433 Msa1406940:CDS 60.0%
TATGGCCCAAGCCCATCCTC+GGG + tig0023248:13415-13434 Msa1406940:CDS 60.0%
CTATAGGCACAGCCCGAGGA+TGG - tig0023248:13430-13449 None:intergenic 60.0%
CATCCTCGGGCTGTGCCTAT+AGG + tig0023248:13428-13447 Msa1406940:CDS 60.0%
GGCTGTGCCTATAGGCCCAT+GGG + tig0023248:13436-13455 Msa1406940:CDS 60.0%
! CACAGCCCGAGGATGGGCTT+GGG - tig0023248:13423-13442 None:intergenic 65.0%
GGGCTGTGCCTATAGGCCCA+TGG + tig0023248:13435-13454 Msa1406940:CDS 65.0%
! CACAGCCCGAGGATGGGCTT+GGG - tig0023248:13423-13442 None:intergenic 65.0%
GGGCTGTGCCTATAGGCCCA+TGG + tig0023248:13435-13454 Msa1406940:CDS 65.0%
! GCACAGCCCGAGGATGGGCT+TGG - tig0023248:13424-13443 None:intergenic 70.0%
GGGCCTATAGGCACAGCCCG+AGG - tig0023248:13434-13453 None:intergenic 70.0%
! GCACAGCCCGAGGATGGGCT+TGG - tig0023248:13424-13443 None:intergenic 70.0%
GGGCCTATAGGCACAGCCCG+AGG - tig0023248:13434-13453 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0023248 gene 12128 13819 12128 ID=Msa1406940;Name=Msa1406940
tig0023248 mRNA 12128 13819 12128 ID=Msa1406940-mRNA-1;Parent=Msa1406940;Name=Msa1406940-mRNA-1;_AED=0.12;_eAED=0.12;_QI=191|1|1|1|0.75|0.6|5|285|272
tig0023248 exon 12128 12424 12128 ID=Msa1406940-mRNA-1:exon:24831;Parent=Msa1406940-mRNA-1
tig0023248 exon 12623 12927 12623 ID=Msa1406940-mRNA-1:exon:24832;Parent=Msa1406940-mRNA-1
tig0023248 exon 13022 13101 13022 ID=Msa1406940-mRNA-1:exon:24833;Parent=Msa1406940-mRNA-1
tig0023248 exon 13181 13692 13181 ID=Msa1406940-mRNA-1:exon:24834;Parent=Msa1406940-mRNA-1
tig0023248 exon 13719 13819 13719 ID=Msa1406940-mRNA-1:exon:24835;Parent=Msa1406940-mRNA-1
tig0023248 five_prime_UTR 12128 12318 12128 ID=Msa1406940-mRNA-1:five_prime_utr;Parent=Msa1406940-mRNA-1
tig0023248 CDS 12319 12424 12319 ID=Msa1406940-mRNA-1:cds;Parent=Msa1406940-mRNA-1
tig0023248 CDS 12623 12927 12623 ID=Msa1406940-mRNA-1:cds;Parent=Msa1406940-mRNA-1
tig0023248 CDS 13022 13101 13022 ID=Msa1406940-mRNA-1:cds;Parent=Msa1406940-mRNA-1
tig0023248 CDS 13181 13508 13181 ID=Msa1406940-mRNA-1:cds;Parent=Msa1406940-mRNA-1
tig0023248 three_prime_UTR 13509 13692 13509 ID=Msa1406940-mRNA-1:three_prime_utr;Parent=Msa1406940-mRNA-1
tig0023248 three_prime_UTR 13719 13819 13719 ID=Msa1406940-mRNA-1:three_prime_utr;Parent=Msa1406940-mRNA-1
Gene Sequence

>Msa1406940

ATGATGATGGTTGAAAAGGAAGACTTGGGTTTGAGTCTTAGCTTGAACTTCTTTCACAATAACTCTTCTCCTCACAAACCATCTTCCATCCAAACCTTCACTTCAGATCGAAACTTGGAAACATGCAGAGGAGAGAGTGGAAAATACCTACGAGGAATCGACGTGAATCGGTTACCATCTACAGCTATTGAATGCCAAGAGGAAGAAGAAGCAGGGGTTTCATCTCCAAACAGCACAGTTTCAAGTGTTAGTGGAAAAAGAAGCTTGAGAGAAGAAGATCATGACGTGGAAAATAGAGGAAATATCAGTGATGAAGAAGACGCTGAAACTGCTAGGAAAAAACTTAGACTCTCTAAAGACCAATCAGCTATTCTTGAAGAAACTTTCAAAGAACACAATACCCTTAATCCCAAGCAAAAGTTGGCACTTGCAAAGCAACTTGGTCTTCGTCCAAGACAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCTAGGACAAAGCTGAAGCAAACAGAGGTTGATTGTGAAGTGTTGAAAAGGTGCTGTGAAAATCTAACGGAGGAAAATAGGAGACTACAGAAGGAAGTTCAAGAGCTTAGAGCACTGAAACTTTCCCCACAATTTTACATGCAAATGACTCCACCAACTACTCTTACTATGTGCCCTTCTTGTGAACGTGTGGCTGTTCCATCTAATGCTTGTGTTGATGCATCTAACCGTCACCATTCTATGGCCCAAGCCCATCCTCGGGCTGTGCCTATAGGCCCATGGGCTTCTTCTCCTCCAGTTACAAATAGGATGTTTGATGTTTTCCGTCAATGA
Protein sequence

>Msa1406940

MMMVEKEDLGLSLSLNFFHNNSSPHKPSSIQTFTSDRNLETCRGESGKYLRGIDVNRLPSTAIECQEEEEAGVSSPNSTVSSVSGKRSLREEDHDVENRGNISDEEDAETARKKLRLSKDQSAILEETFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSNACVDASNRHHSMAQAHPRAVPIGPWASSPPVTNRMFDVFRQ*