Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415050 | sp|P29102|LEU3_BRANA | 77.995 | 409 | 79 | 4 | 1 | 402 | 1 | 405 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415050 | G7IMC1 | 98.272 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 0.0 | 814 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0305400 | Msa1415050 | 0.833158 | 6.260713e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415050 | MtrunA17_Chr2g0333571 | 98.272 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 0.0 | 814 |
| Msa1415050 | MtrunA17_Chr1g0181081 | 32.249 | 338 | 199 | 10 | 42 | 374 | 29 | 341 | 2.97e-43 | 154 |
| Msa1415050 | MtrunA17_Chr3g0133741 | 31.232 | 349 | 205 | 11 | 31 | 374 | 18 | 336 | 1.42e-42 | 152 |
| Msa1415050 | MtrunA17_Chr5g0406691 | 28.378 | 370 | 215 | 14 | 18 | 374 | 17 | 349 | 5.38e-28 | 113 |
| Msa1415050 | MtrunA17_Chr8g0370691 | 28.647 | 377 | 212 | 17 | 20 | 374 | 12 | 353 | 4.52e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415050 | AT1G80560.1 | 78.025 | 405 | 85 | 3 | 1 | 402 | 1 | 404 | 0.0 | 640 |
| Msa1415050 | AT1G31180.1 | 74.750 | 400 | 100 | 1 | 1 | 400 | 5 | 403 | 0.0 | 619 |
| Msa1415050 | AT1G31180.2 | 74.750 | 400 | 100 | 1 | 1 | 400 | 20 | 418 | 0.0 | 618 |
| Msa1415050 | AT5G14200.1 | 78.877 | 374 | 78 | 1 | 28 | 401 | 35 | 407 | 0.0 | 615 |
| Msa1415050 | AT5G14200.3 | 78.693 | 352 | 74 | 1 | 28 | 379 | 35 | 385 | 0.0 | 577 |
| Msa1415050 | AT5G14200.2 | 74.800 | 250 | 62 | 1 | 28 | 277 | 35 | 283 | 1.15e-136 | 393 |
| Msa1415050 | AT5G03290.1 | 32.000 | 350 | 203 | 11 | 30 | 374 | 38 | 357 | 5.37e-46 | 162 |
| Msa1415050 | AT3G09810.1 | 31.686 | 344 | 205 | 10 | 36 | 374 | 39 | 357 | 2.23e-42 | 153 |
| Msa1415050 | AT1G80555.2 | 58.462 | 130 | 51 | 2 | 12 | 140 | 13 | 140 | 4.65e-41 | 144 |
| Msa1415050 | AT4G35650.1 | 29.915 | 351 | 196 | 15 | 43 | 379 | 41 | 355 | 6.89e-31 | 122 |
| Msa1415050 | AT1G80555.1 | 55.238 | 105 | 44 | 2 | 12 | 115 | 13 | 115 | 4.29e-28 | 107 |
| Msa1415050 | AT4G35260.1 | 28.986 | 345 | 197 | 14 | 43 | 374 | 40 | 349 | 1.53e-27 | 112 |
| Msa1415050 | AT2G17130.1 | 28.492 | 358 | 208 | 14 | 35 | 379 | 32 | 354 | 2.21e-27 | 112 |
| Msa1415050 | AT2G17130.2 | 29.050 | 358 | 202 | 15 | 35 | 379 | 32 | 350 | 2.39e-27 | 112 |
Find 123 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTTCAGGTATCTATTT+TGG | 0.144862 | tig0024171:+3489 | Msa1415050:intron |
| TTCAATAAGCGGACCTGTTT+TGG | 0.207119 | tig0024171:-5180 | None:intergenic |
| CAATCTGATGCTGTTCTTCT+TGG | 0.248086 | tig0024171:+1138 | Msa1415050:CDS |
| ACCAACCTGTCCGGCAATAT+CGG | 0.261008 | tig0024171:-5610 | None:intergenic |
| TTCACCAGGCATCCATGTTT+TGG | 0.270648 | tig0024171:+5064 | Msa1415050:intron |
| TGCTTCCTTCTGCTAGCCTT+GGG | 0.291623 | tig0024171:+5402 | Msa1415050:CDS |
| CCCCAGGTTCAATTCAAGTT+TGG | 0.298982 | tig0024171:-6788 | None:intergenic |
| TTCTGCTAGCCTTGGGGATT+CGG | 0.309953 | tig0024171:+5409 | Msa1415050:CDS |
| GAACCTGGGGATTATTAGTT+AGG | 0.313207 | tig0024171:+6801 | Msa1415050:three_prime_UTR |
| GGCTTTGGTACCAATGAAAA+TGG | 0.314723 | tig0024171:+3522 | Msa1415050:CDS |
| GTGCGAAAATGAAAGGGTTT+TGG | 0.316644 | tig0024171:-776 | None:intergenic |
| TACAAAATCACTCTCCTTCC+CGG | 0.323343 | tig0024171:+863 | Msa1415050:CDS |
| GCTGTTCTTCTTGGTGCCAT+TGG | 0.338405 | tig0024171:+1147 | Msa1415050:CDS |
| TTTGGAAAGCCAAGGGGCTT+TGG | 0.363992 | tig0024171:+3507 | Msa1415050:CDS |
| ATGCTTCCTTCTGCTAGCCT+TGG | 0.369163 | tig0024171:+5401 | Msa1415050:CDS |
| CAATGATCACCGGAAGTATT+GGG | 0.404840 | tig0024171:+5378 | Msa1415050:CDS |
| AATGAAAATGGCGAAGAGAT+TGG | 0.405488 | tig0024171:+3534 | Msa1415050:CDS |
| ATCACTCTCCTTCCCGGCGA+TGG | 0.407505 | tig0024171:+869 | Msa1415050:CDS |
| AGAACATGAGTGAGTGAGAA+GGG | 0.420897 | tig0024171:-687 | None:intergenic |
| CACTGAGAACAGTGGCAAAT+GGG | 0.427853 | tig0024171:-5722 | None:intergenic |
| TTAGCGACGGATACGACTTC+AGG | 0.430074 | tig0024171:-899 | None:intergenic |
| AAACATTTGAAGCCAGAGAC+TGG | 0.436059 | tig0024171:+1285 | Msa1415050:CDS |
| GTTCTTCTTGGTGCCATTGG+AGG | 0.436315 | tig0024171:+1150 | Msa1415050:CDS |
| TGAGTTTCAAGAGAAGCTTT+TGG | 0.436698 | tig0024171:+1053 | Msa1415050:CDS |
| GGTTCTGCACCCGATATTGC+CGG | 0.438470 | tig0024171:+5600 | Msa1415050:CDS |
| GGGTTGATCTCATGGTTGTA+AGG | 0.442103 | tig0024171:+3286 | Msa1415050:CDS |
| CTGGTAGGATGCAAACAATT+AGG | 0.442519 | tig0024171:+6556 | Msa1415050:CDS |
| GCACTGAGAACAGTGGCAAA+TGG | 0.443151 | tig0024171:-5723 | None:intergenic |
| ATGGTTGTAAGGGAATTAAC+TGG | 0.443168 | tig0024171:+3297 | Msa1415050:CDS |
| TTCTTCTTGGTGCCATTGGA+GGG | 0.449624 | tig0024171:+1151 | Msa1415050:CDS |
| TCAATGATCACCGGAAGTAT+TGG | 0.455664 | tig0024171:+5377 | Msa1415050:CDS |
| CGTCTAATCTAAATGAATGT+TGG | 0.455699 | tig0024171:+7072 | Msa1415050:three_prime_UTR |
| TTATTATTGGATCAGGGACC+TGG | 0.456758 | tig0024171:+5558 | Msa1415050:intron |
| GACGGTGGCCGAACATCTTA+CGG | 0.457028 | tig0024171:-822 | None:intergenic |
| GATAATTACCTCTAGAACAT+TGG | 0.467535 | tig0024171:-3916 | None:intergenic |
| AACTGAAGCAATCCAGTCTC+TGG | 0.470156 | tig0024171:-1297 | None:intergenic |
| GGTGCTGCACTTGATGCTAC+TGG | 0.472199 | tig0024171:+1078 | Msa1415050:CDS |
| CTCCAAACTTGAATTGAACC+TGG | 0.475782 | tig0024171:+6786 | Msa1415050:three_prime_UTR |
| ATTCCCTGCACTATTAATGC+TGG | 0.478183 | tig0024171:+7031 | Msa1415050:three_prime_UTR |
| AGGAAGCATCCCAATACTTC+CGG | 0.478682 | tig0024171:-5387 | None:intergenic |
| CCAACCTGTCCGGCAATATC+GGG | 0.478719 | tig0024171:-5609 | None:intergenic |
| ACTTGTTCGCTATCCAAAAC+AGG | 0.483642 | tig0024171:+5167 | Msa1415050:CDS |
| TGCACCCGATATTGCCGGAC+AGG | 0.487301 | tig0024171:+5605 | Msa1415050:CDS |
| CTGCCCAGCATTAATAGTGC+AGG | 0.491279 | tig0024171:-7035 | None:intergenic |
| AATCAATACACACACGTTGA+AGG | 0.496300 | tig0024171:-582 | None:intergenic |
| AAAGACATTCTTCTTCTCAC+TGG | 0.497750 | tig0024171:+920 | Msa1415050:CDS |
| AGTAGCTTCTATCTCAGAAT+GGG | 0.497778 | tig0024171:-6886 | None:intergenic |
| TCGGGTGCAGAACCATGTAT+AGG | 0.498618 | tig0024171:-5591 | None:intergenic |
| GAACAATGATATGTAGAGGT+TGG | 0.499621 | tig0024171:+6852 | Msa1415050:three_prime_UTR |
| ACGAACCTCCGTAAGATGTT+CGG | 0.503542 | tig0024171:+814 | Msa1415050:CDS |
| CAACATTCATTTAGATTAGA+CGG | 0.504278 | tig0024171:-7071 | None:intergenic |
| GCAGCAGAAAGAGTGTCATC+AGG | 0.504964 | tig0024171:-1111 | None:intergenic |
| GTTTGGAGAGTACATAGGTT+GGG | 0.506350 | tig0024171:-6771 | None:intergenic |
| CTCCTTCCCGGCGATGGGAT+AGG | 0.507439 | tig0024171:+875 | Msa1415050:CDS |
| TATTATAACATGCGTCGTGA+GGG | 0.509062 | tig0024171:-6826 | None:intergenic |
| AAGTAGCTTCTATCTCAGAA+TGG | 0.514328 | tig0024171:-6887 | None:intergenic |
| ATGTGTGAGAGCTCAACATC+AGG | 0.514500 | tig0024171:-5120 | None:intergenic |
| TCACTCTCCTTCCCGGCGAT+GGG | 0.514772 | tig0024171:+870 | Msa1415050:CDS |
| AATCACACTGCTGCAGCGGC+TGG | 0.515515 | tig0024171:-6613 | None:intergenic |
| GTAGAAGAAACCAACCTGTC+CGG | 0.516009 | tig0024171:-5619 | None:intergenic |
| GAAGAGAGAGGTTGCTGAGG+GGG | 0.516796 | tig0024171:+3266 | Msa1415050:CDS |
| GAGAACATGAGTGAGTGAGA+AGG | 0.528758 | tig0024171:-688 | None:intergenic |
| ACCTGTGGAAACACCGTCGC+TGG | 0.532095 | tig0024171:-1354 | None:intergenic |
| GAAAGAGTGTCATCAGGTAA+AGG | 0.535349 | tig0024171:-1105 | None:intergenic |
| AGCTACTTGTGACAAATCCA+TGG | 0.537178 | tig0024171:+6902 | Msa1415050:three_prime_UTR |
| TCCAAACTTGAATTGAACCT+GGG | 0.537447 | tig0024171:+6787 | Msa1415050:three_prime_UTR |
| TTCAGGACCTATCCCATCGC+CGG | 0.538250 | tig0024171:-882 | None:intergenic |
| TTCCCTGCACTATTAATGCT+GGG | 0.544497 | tig0024171:+7032 | Msa1415050:three_prime_UTR |
| CTATTATAACATGCGTCGTG+AGG | 0.547458 | tig0024171:-6827 | None:intergenic |
| ACTGCTGACATATATTCTGA+TGG | 0.552907 | tig0024171:+5837 | Msa1415050:CDS |
| TAAGTGGGTGCGAAAATGAA+AGG | 0.554388 | tig0024171:-783 | None:intergenic |
| GATTGCTTCAGTTACGAGAA+GGG | 0.555106 | tig0024171:+1307 | Msa1415050:CDS |
| GTGTTGCATTTAACATTGCT+CGG | 0.555227 | tig0024171:+3859 | Msa1415050:CDS |
| TCAGGACCTATCCCATCGCC+GGG | 0.558262 | tig0024171:-881 | None:intergenic |
| AAGTGGGTGCGAAAATGAAA+GGG | 0.559097 | tig0024171:-782 | None:intergenic |
| GACCTATCCCATCGCCGGGA+AGG | 0.560662 | tig0024171:-877 | None:intergenic |
| TGCTTCAACTTTGAAGAGAG+AGG | 0.562877 | tig0024171:+3254 | Msa1415050:CDS |
| GGTTGATCTCATGGTTGTAA+GGG | 0.565168 | tig0024171:+3287 | Msa1415050:CDS |
| GCTTCCTTCTGCTAGCCTTG+GGG | 0.565344 | tig0024171:+5403 | Msa1415050:CDS |
| AGAGCTTTGGCTTTCATATG+CGG | 0.565638 | tig0024171:+6727 | Msa1415050:three_prime_UTR |
| AACATTGCTCGGAAGCGTGG+TGG | 0.567306 | tig0024171:+3870 | Msa1415050:CDS |
| TGCTAATCTCAGACCAGCGA+CGG | 0.568770 | tig0024171:+1341 | Msa1415050:CDS |
| TTCAAGTTTGGAGAGTACAT+AGG | 0.570103 | tig0024171:-6776 | None:intergenic |
| TTGAAGAGAGAGGTTGCTGA+GGG | 0.570467 | tig0024171:+3264 | Msa1415050:CDS |
| AGTTTGGAGAGTACATAGGT+TGG | 0.570552 | tig0024171:-6772 | None:intergenic |
| ACATTGCTCGGAAGCGTGGT+GGG | 0.572524 | tig0024171:+3871 | Msa1415050:CDS |
| CTTCTCACTGGATCCCTCCA+CGG | 0.575289 | tig0024171:+932 | Msa1415050:CDS |
| ACCAGCGACGGTGTTTCCAC+AGG | 0.577915 | tig0024171:+1353 | Msa1415050:CDS |
| GACGAGGCTTCAATGATCAC+CGG | 0.579299 | tig0024171:+5368 | Msa1415050:CDS |
| TCATTGGTACCAAAGCCCCT+TGG | 0.581887 | tig0024171:-3516 | None:intergenic |
| TTTAACATTGCTCGGAAGCG+TGG | 0.581968 | tig0024171:+3867 | Msa1415050:CDS |
| AAGAAGAATGTCTTTAGCGA+CGG | 0.585226 | tig0024171:-912 | None:intergenic |
| TTAAAATCACACTGCTGCAG+CGG | 0.586163 | tig0024171:-6617 | None:intergenic |
| GGATTGCTTCAGTTACGAGA+AGG | 0.587143 | tig0024171:+1306 | Msa1415050:CDS |
| ATATGGTCTTGGAGAAGTAG+AGG | 0.588123 | tig0024171:+5761 | Msa1415050:CDS |
| GCTACTTGTGACAAATCCAT+GGG | 0.591136 | tig0024171:+6903 | Msa1415050:three_prime_UTR |
| ATTATAACATGCGTCGTGAG+GGG | 0.598231 | tig0024171:-6825 | None:intergenic |
| TGATATGAATATAACAAACA+TGG | 0.605873 | tig0024171:+7008 | Msa1415050:three_prime_UTR |
| AGCAATGTTAAATGCAACAC+GGG | 0.617161 | tig0024171:-3856 | None:intergenic |
| TGCCCAGCATTAATAGTGCA+GGG | 0.619875 | tig0024171:-7034 | None:intergenic |
| GTGTTAATGCAGAAGCTGGT+AGG | 0.620975 | tig0024171:+6541 | Msa1415050:intron |
| AGCGGAACAATGATATGTAG+AGG | 0.622205 | tig0024171:+6848 | Msa1415050:three_prime_UTR |
| TGACAAAGCCAATGTTCTAG+AGG | 0.623589 | tig0024171:+3908 | Msa1415050:CDS |
| ATAAGTTAAGTACCCTCCAA+TGG | 0.623638 | tig0024171:-1163 | None:intergenic |
| GGACCTAACTAATAATCCCC+AGG | 0.624692 | tig0024171:-6804 | None:intergenic |
| CCAAACTTGAATTGAACCTG+GGG | 0.625727 | tig0024171:+6788 | Msa1415050:three_prime_UTR |
| TGTTGGGTACCTACCGTGGA+GGG | 0.626216 | tig0024171:-945 | None:intergenic |
| TGAGATTTATGCTGCACATG+AGG | 0.630531 | tig0024171:+3566 | Msa1415050:CDS |
| TTTGAAGAGAGAGGTTGCTG+AGG | 0.641076 | tig0024171:+3263 | Msa1415050:CDS |
| GAATCCCCAAGGCTAGCAGA+AGG | 0.644380 | tig0024171:-5407 | None:intergenic |
| AGGTGAAGAGATACTGAAGT+CGG | 0.644945 | tig0024171:+6576 | Msa1415050:CDS |
| TGGCGACATATTATCTGACG+AGG | 0.646768 | tig0024171:+5352 | Msa1415050:CDS |
| TGTGAGTGATTCGGTTTCTG+CGG | 0.661424 | tig0024171:-713 | None:intergenic |
| GAGCAATGTTAAATGCAACA+CGG | 0.687774 | tig0024171:-3857 | None:intergenic |
| GTTGTAAGGGAATTAACTGG+AGG | 0.696117 | tig0024171:+3300 | Msa1415050:CDS |
| ATGTTGGGTACCTACCGTGG+AGG | 0.701391 | tig0024171:-946 | None:intergenic |
| CATAGCAGCACTGAGAACAG+TGG | 0.704604 | tig0024171:-5730 | None:intergenic |
| CACGACGCATGTTATAATAG+CGG | 0.708193 | tig0024171:+6830 | Msa1415050:three_prime_UTR |
| TAAATGCAACACGGGCAATG+CGG | 0.717451 | tig0024171:-3848 | None:intergenic |
| TGAAGAGAGAGGTTGCTGAG+GGG | 0.723184 | tig0024171:+3265 | Msa1415050:CDS |
| GTTCTCGAGACACTGAACAG+AGG | 0.725396 | tig0024171:+5807 | Msa1415050:CDS |
| CTACTTGTGACAAATCCATG+GGG | 0.756331 | tig0024171:+6904 | Msa1415050:three_prime_UTR |
| GGTGGCCGAACATCTTACGG+AGG | 0.766487 | tig0024171:-819 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCAATTTCAATTTTTTT+TGG | + | tig0024171:1191-1210 | Msa1415050:intron | 10.0% |
| !!! | AATATTTTTGAAGATATAAA+TGG | + | tig0024171:1250-1269 | Msa1415050:intron | 10.0% |
| !!! | ATATTTTTGAAGATATAAAT+GGG | + | tig0024171:1251-1270 | Msa1415050:intron | 10.0% |
| !! | AAAAAAAAAAACTAAACTTA+TGG | + | tig0024171:3018-3037 | Msa1415050:intron | 10.0% |
| !! | AAAAAAAAAACTAAACTTAT+GGG | + | tig0024171:3019-3038 | Msa1415050:intron | 10.0% |
| !!! | TTTTTCTTACAATTTTTTAA+CGG | + | tig0024171:3169-3188 | Msa1415050:intron | 10.0% |
| !! | TTGAAAAAAGAATGAAAATT+TGG | - | tig0024171:981-1000 | None:intergenic | 15.0% |
| !!! | ATTTTCATTCTTTTTTCAAT+TGG | + | tig0024171:982-1001 | Msa1415050:intron | 15.0% |
| !!! | TTTTCATTCTTTTTTCAATT+GGG | + | tig0024171:983-1002 | Msa1415050:intron | 15.0% |
| !!! | TTATCTTTTGTTTTTGAATT+AGG | + | tig0024171:1021-1040 | Msa1415050:intron | 15.0% |
| !!! | TATCTTTTGTTTTTGAATTA+GGG | + | tig0024171:1022-1041 | Msa1415050:intron | 15.0% |
| !!! | TTTTTGGTTTTTTTTTTATG+TGG | + | tig0024171:1207-1226 | Msa1415050:intron | 15.0% |
| !! | ACAATATCAAAAACAAAAAT+GGG | - | tig0024171:3640-3659 | None:intergenic | 15.0% |
| !! | AACAATATCAAAAACAAAAA+TGG | - | tig0024171:3641-3660 | None:intergenic | 15.0% |
| !!! | TGTTTTTGATATTGTTTTTA+TGG | + | tig0024171:3645-3664 | Msa1415050:intron | 15.0% |
| !!! | AAAAGTAATTTATACCTTTT+TGG | - | tig0024171:4433-4452 | None:intergenic | 15.0% |
| !! | ATGTTAATTTATTCAATAAG+CGG | - | tig0024171:5194-5213 | None:intergenic | 15.0% |
| !! | TTTCAACACTAATAAATATA+AGG | - | tig0024171:5881-5900 | None:intergenic | 15.0% |
| !!! | TCAAATCACATTTTAAATTT+TGG | - | tig0024171:6935-6954 | None:intergenic | 15.0% |
| !! | TAAGATAAAAAATTTACCTG+TGG | - | tig0024171:1372-1391 | None:intergenic | 20.0% |
| !! | ATTCTATTACTATATCCTTA+AGG | - | tig0024171:3135-3154 | None:intergenic | 20.0% |
| !! | TTAAGGATATAGTAATAGAA+TGG | + | tig0024171:3134-3153 | Msa1415050:intron | 20.0% |
| !! | ATTTCATTTGACTGTTAATA+TGG | + | tig0024171:3426-3445 | Msa1415050:intron | 20.0% |
| !! | TTTCATTTGACTGTTAATAT+GGG | + | tig0024171:3427-3446 | Msa1415050:intron | 20.0% |
| !!! | CTATATTATTTCTGTATGTA+TGG | + | tig0024171:3791-3810 | Msa1415050:intron | 20.0% |
| !! | TTTGATATTCTGTTTAGATT+GGG | + | tig0024171:4192-4211 | Msa1415050:intron | 20.0% |
| !! | CTATAAAAATTTGCATATCT+TGG | - | tig0024171:4292-4311 | None:intergenic | 20.0% |
| !!! | ATTTTCTTGAATAAGTACTT+AGG | - | tig0024171:4871-4890 | None:intergenic | 20.0% |
| !! | GATTAACAGAAATTGTATAA+AGG | + | tig0024171:4899-4918 | Msa1415050:intron | 20.0% |
| !! | ACAAGTCTTAATTATTCAAT+GGG | - | tig0024171:4963-4982 | None:intergenic | 20.0% |
| !! | AAAGTTTACTGGATTATTAT+TGG | + | tig0024171:5545-5564 | Msa1415050:intron | 20.0% |
| !! | TATTATCTGTATCTATATAC+AGG | + | tig0024171:5689-5708 | Msa1415050:intron | 20.0% |
| !! | ATAAAAACTGGTATTAGAAA+TGG | + | tig0024171:5943-5962 | Msa1415050:intron | 20.0% |
| !!! | AACTTTTTAAAAACCTAGAA+TGG | + | tig0024171:6255-6274 | Msa1415050:intron | 20.0% |
| !!! | ACTTTTTAAAAACCTAGAAT+GGG | + | tig0024171:6256-6275 | Msa1415050:intron | 20.0% |
| !! | TTCTGAATAAACTTGATATT+TGG | + | tig0024171:6513-6532 | Msa1415050:intron | 20.0% |
| !!! | ACCAACTCAATATATTTTTA+GGG | + | tig0024171:6641-6660 | Msa1415050:three_prime_UTR | 20.0% |
| !!! | CAAAGCTCTAAAAAAAAATA+GGG | - | tig0024171:6716-6735 | None:intergenic | 20.0% |
| !! | TGATATGAATATAACAAACA+TGG | + | tig0024171:7008-7027 | Msa1415050:three_prime_UTR | 20.0% |
| ! | TTTGATAAACAGGTAAGTAA+AGG | + | tig0024171:1450-1469 | Msa1415050:intron | 25.0% |
| ! | TCAAAATATTATCACCGAAT+TGG | + | tig0024171:1676-1695 | Msa1415050:intron | 25.0% |
| ! | AACAAGCTTCAAATAAGAAA+TGG | + | tig0024171:1713-1732 | Msa1415050:intron | 25.0% |
| ! | TTTGTTTCAGTTTAATGTAG+TGG | + | tig0024171:2245-2264 | Msa1415050:intron | 25.0% |
| !! | GAGTAGTTGAATATATTTTC+TGG | + | tig0024171:2601-2620 | Msa1415050:intron | 25.0% |
| !!! | AATATATTTTCTGGTGCTAA+TGG | + | tig0024171:2610-2629 | Msa1415050:intron | 25.0% |
| ! | ATGAGTCAAAATTTGATTGA+GGG | + | tig0024171:2775-2794 | Msa1415050:intron | 25.0% |
| !!! | TGCTTTTTGTATTCTATTGT+TGG | + | tig0024171:2896-2915 | Msa1415050:intron | 25.0% |
| ! | TTATGGAATTAACATTGTCT+AGG | + | tig0024171:3662-3681 | Msa1415050:intron | 25.0% |
| !! | TGCATATTTCACTGTTTTAT+TGG | + | tig0024171:3710-3729 | Msa1415050:intron | 25.0% |
| ! | ACAAGGAAAAAACAAATAAG+AGG | - | tig0024171:4173-4192 | None:intergenic | 25.0% |
| ! | TCTAAACAGAATATCAAACA+AGG | - | tig0024171:4190-4209 | None:intergenic | 25.0% |
| ! | GTTTGATATTCTGTTTAGAT+TGG | + | tig0024171:4191-4210 | Msa1415050:intron | 25.0% |
| ! | CAATTAGGAAAATGTCAATT+TGG | - | tig0024171:4464-4483 | None:intergenic | 25.0% |
| ! | AAACATAAAATCCAAGCTAA+AGG | - | tig0024171:4516-4535 | None:intergenic | 25.0% |
| !! | TTTTGATGAATTGATAGAAG+TGG | - | tig0024171:4754-4773 | None:intergenic | 25.0% |
| ! | CACAAGTCTTAATTATTCAA+TGG | - | tig0024171:4964-4983 | None:intergenic | 25.0% |
| ! | CAAATATAAAATCAAAGAGG+GGG | - | tig0024171:5219-5238 | None:intergenic | 25.0% |
| ! | CCAAATATAAAATCAAAGAG+GGG | - | tig0024171:5220-5239 | None:intergenic | 25.0% |
| ! | GCCAAATATAAAATCAAAGA+GGG | - | tig0024171:5221-5240 | None:intergenic | 25.0% |
| ! | AGCCAAATATAAAATCAAAG+AGG | - | tig0024171:5222-5241 | None:intergenic | 25.0% |
| !! | ATTGTAACGAACAACATTTT+TGG | + | tig0024171:5332-5351 | Msa1415050:CDS | 25.0% |
| ! | CAACACTAATAAATATAAGG+AGG | - | tig0024171:5878-5897 | None:intergenic | 25.0% |
| !!! | GTTTTTTTCTAATTGCACTT+TGG | + | tig0024171:5910-5929 | Msa1415050:intron | 25.0% |
| !! | GGTTCATTGATTATAAAAAC+TGG | + | tig0024171:5931-5950 | Msa1415050:intron | 25.0% |
| !! | ATTGCTTAACTTCTTTTTGA+TGG | + | tig0024171:5996-6015 | Msa1415050:intron | 25.0% |
| !! | TTGCTTAACTTCTTTTTGAT+GGG | + | tig0024171:5997-6016 | Msa1415050:intron | 25.0% |
| ! | GTGTTAAACTTTATGAAACA+TGG | - | tig0024171:6028-6047 | None:intergenic | 25.0% |
| !! | ACATTGTTATTGCAGAAAAA+AGG | + | tig0024171:6046-6065 | Msa1415050:intron | 25.0% |
| !! | CATTGTTATTGCAGAAAAAA+GGG | + | tig0024171:6047-6066 | Msa1415050:intron | 25.0% |
| !! | TAAAAAGTTGTGTCATTGTA+TGG | - | tig0024171:6244-6263 | None:intergenic | 25.0% |
| !! | AGATCAACAGTTTTTATACA+TGG | + | tig0024171:6327-6346 | Msa1415050:intron | 25.0% |
| !! | GACCAACTCAATATATTTTT+AGG | + | tig0024171:6640-6659 | Msa1415050:three_prime_UTR | 25.0% |
| !!! | CCAAAGCTCTAAAAAAAAAT+AGG | - | tig0024171:6717-6736 | None:intergenic | 25.0% |
| !!! | CCTATTTTTTTTTAGAGCTT+TGG | + | tig0024171:6714-6733 | Msa1415050:three_prime_UTR | 25.0% |
| ! | CAACATTCATTTAGATTAGA+CGG | - | tig0024171:7074-7093 | None:intergenic | 25.0% |
| ! | ATTTTTGTGTGTGAGTGATT+CGG | - | tig0024171:725-744 | None:intergenic | 30.0% |
| ATTTGGAAGCAATGAATGTT+GGG | - | tig0024171:964-983 | None:intergenic | 30.0% | |
| AATTTGGAAGCAATGAATGT+TGG | - | tig0024171:965-984 | None:intergenic | 30.0% | |
| ! | GCATTTTATCATTCTTGTTG+TGG | + | tig0024171:1394-1413 | Msa1415050:intron | 30.0% |
| ! | ATGCTTTGACTTTGATAAAC+AGG | + | tig0024171:1440-1459 | Msa1415050:intron | 30.0% |
| !!! | TTTTTCTAAGAAAGTACTCC+AGG | - | tig0024171:1621-1640 | None:intergenic | 30.0% |
| GACTTGATCTACAATCATAT+AGG | - | tig0024171:1658-1677 | None:intergenic | 30.0% | |
| TATTATCACCGAATTGGTTA+TGG | + | tig0024171:1682-1701 | Msa1415050:intron | 30.0% | |
| !! | GATTTTGACCATAACCAATT+CGG | - | tig0024171:1693-1712 | None:intergenic | 30.0% |
| AAATTTGCCATAACAGTGTT+TGG | + | tig0024171:2176-2195 | Msa1415050:intron | 30.0% | |
| !! | CATCAGAATGGATTATAAAG+TGG | + | tig0024171:2471-2490 | Msa1415050:intron | 30.0% |
| TGGATAAAAGCTAGAGTTAA+GGG | + | tig0024171:2523-2542 | Msa1415050:intron | 30.0% | |
| TTGTTGTGCTAACTCAAATT+GGG | + | tig0024171:2708-2727 | Msa1415050:intron | 30.0% | |
| GATGAGTCAAAATTTGATTG+AGG | + | tig0024171:2774-2793 | Msa1415050:intron | 30.0% | |
| AATTTGATTGAGGGTTATGT+AGG | + | tig0024171:2784-2803 | Msa1415050:intron | 30.0% | |
| !! | CTCCTAGATATTGTTGATTT+CGG | + | tig0024171:2970-2989 | Msa1415050:intron | 30.0% |
| TCAATTCAAACAGAACCTTA+AGG | + | tig0024171:3117-3136 | Msa1415050:intron | 30.0% | |
| TAGTAATAGAATGGTTTGAG+AGG | + | tig0024171:3143-3162 | Msa1415050:intron | 30.0% | |
| TAGATACCTGAACAACAAAT+AGG | - | tig0024171:3486-3505 | None:intergenic | 30.0% | |
| ! | TGTTGTTCAGGTATCTATTT+TGG | + | tig0024171:3489-3508 | Msa1415050:intron | 30.0% |
| !! | TATCTATTTTGGAAAGCCAA+GGG | + | tig0024171:3500-3519 | Msa1415050:CDS | 30.0% |
| !! | AGGTATCTTGCTATTACAAA+TGG | + | tig0024171:3586-3605 | Msa1415050:intron | 30.0% |
| !! | TATCTTGCTATTACAAATGG+TGG | + | tig0024171:3589-3608 | Msa1415050:intron | 30.0% |
| !! | GATAATTACCTCTAGAACAT+TGG | - | tig0024171:3919-3938 | None:intergenic | 30.0% |
| AGATTAACACCAATCTTTAC+AGG | - | tig0024171:4064-4083 | None:intergenic | 30.0% | |
| TTACAAGTTTAAGCACTTCA+AGG | - | tig0024171:4118-4137 | None:intergenic | 30.0% | |
| CTACTTGATACAAAGTTAAG+TGG | + | tig0024171:4334-4353 | Msa1415050:intron | 30.0% | |
| AGAGAAAAAACAGTAATCAG+TGG | + | tig0024171:4376-4395 | Msa1415050:intron | 30.0% | |
| !! | CTTTTTGGTCTCATTTGTAA+AGG | - | tig0024171:4418-4437 | None:intergenic | 30.0% |
| CTTTACAAATGAGACCAAAA+AGG | + | tig0024171:4416-4435 | Msa1415050:intron | 30.0% | |
| TAGGAAAATGTCAATTTGGA+TGG | - | tig0024171:4460-4479 | None:intergenic | 30.0% | |
| AGCACAAACAATCTACAATT+AGG | - | tig0024171:4479-4498 | None:intergenic | 30.0% | |
| ! | TACTTTAGAAAATAAGCCAC+CGG | - | tig0024171:4575-4594 | None:intergenic | 30.0% |
| CTATCAATTCATCAAAAGCT+TGG | + | tig0024171:4757-4776 | Msa1415050:intron | 30.0% | |
| !! | TATCATCAACATTAGTCTTG+AGG | - | tig0024171:4822-4841 | None:intergenic | 30.0% |
| ! | GGTATGCATTTTTCACATAA+AGG | - | tig0024171:4942-4961 | None:intergenic | 30.0% |
| ! | ATTAAGACTTGTGCATGTTT+TGG | + | tig0024171:4971-4990 | Msa1415050:intron | 30.0% |
| !! | CCCCTCTTTGATTTTATATT+TGG | + | tig0024171:5217-5236 | Msa1415050:intron | 30.0% |
| TGATTTCGCTAAAAGTTTAC+TGG | + | tig0024171:5534-5553 | Msa1415050:intron | 30.0% | |
| TACTGGATTATTATTGGATC+AGG | + | tig0024171:5551-5570 | Msa1415050:intron | 30.0% | |
| ACTGGATTATTATTGGATCA+GGG | + | tig0024171:5552-5571 | Msa1415050:intron | 30.0% | |
| TCTGTTCATTAATTTCCTTC+AGG | + | tig0024171:5643-5662 | Msa1415050:intron | 30.0% | |
| !!! | ATGCTTTTGAAATATGGTCT+TGG | + | tig0024171:5750-5769 | Msa1415050:CDS | 30.0% |
| AAGTTAAGCAATGCTCTAAT+GGG | - | tig0024171:5988-6007 | None:intergenic | 30.0% | |
| TTGTACTAAATTGCGTATTG+TGG | + | tig0024171:6134-6153 | Msa1415050:intron | 30.0% | |
| AAATGAATGCTGTCAAATAG+CGG | - | tig0024171:6203-6222 | None:intergenic | 30.0% | |
| ATGGGTCCTACAATTTAAAA+CGG | + | tig0024171:6274-6293 | Msa1415050:intron | 30.0% | |
| GGGTTCTTAAACTTAAGAAT+AGG | - | tig0024171:6394-6413 | None:intergenic | 30.0% | |
| !!! | GATAGGAGTTGTTGTTTTTA+GGG | - | tig0024171:6414-6433 | None:intergenic | 30.0% |
| !!! | TGATAGGAGTTGTTGTTTTT+AGG | - | tig0024171:6415-6434 | None:intergenic | 30.0% |
| !! | ATATTGAGAGCATTTCTGAT+AGG | - | tig0024171:6431-6450 | None:intergenic | 30.0% |
| GCCCTAAAAATATATTGAGT+TGG | - | tig0024171:6645-6664 | None:intergenic | 30.0% | |
| !!! | TAAATTTTGGAATATCCCCA+TGG | - | tig0024171:6922-6941 | None:intergenic | 30.0% |
| CGTCTAATCTAAATGAATGT+TGG | + | tig0024171:7072-7091 | Msa1415050:three_prime_UTR | 30.0% | |
| AATCAATACACACACGTTGA+AGG | - | tig0024171:585-604 | None:intergenic | 35.0% | |
| ! | TGCGAAAATGAAAGGGTTTT+GGG | - | tig0024171:778-797 | None:intergenic | 35.0% |
| !! | GGTTCGTTTTGATGATAAGT+GGG | - | tig0024171:801-820 | None:intergenic | 35.0% |
| !! | AGGTTCGTTTTGATGATAAG+TGG | - | tig0024171:802-821 | None:intergenic | 35.0% |
| !!! | TGTAGGAACGTTTTGAAGAA+GGG | - | tig0024171:847-866 | None:intergenic | 35.0% |
| !!! | TTGTAGGAACGTTTTGAAGA+AGG | - | tig0024171:848-867 | None:intergenic | 35.0% |
| AAGAAGAATGTCTTTAGCGA+CGG | - | tig0024171:915-934 | None:intergenic | 35.0% | |
| AAAGACATTCTTCTTCTCAC+TGG | + | tig0024171:920-939 | Msa1415050:CDS | 35.0% | |
| ! | TGAGTTTCAAGAGAAGCTTT+TGG | + | tig0024171:1053-1072 | Msa1415050:CDS | 35.0% |
| ! | GAGTTTCAAGAGAAGCTTTT+GGG | + | tig0024171:1054-1073 | Msa1415050:CDS | 35.0% |
| ATAAGTTAAGTACCCTCCAA+TGG | - | tig0024171:1166-1185 | None:intergenic | 35.0% | |
| TCAAAGTCAAAGCATGCTAA+AGG | - | tig0024171:1435-1454 | None:intergenic | 35.0% | |
| TCAAAGTCAAAGCATGCTAA+AGG | - | tig0024171:1435-1454 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTGATAAGTTATCC+TGG | + | tig0024171:1600-1619 | Msa1415050:intron | 35.0% |
| TCAAATAAGAAATGGCACAG+TGG | + | tig0024171:1721-1740 | Msa1415050:intron | 35.0% | |
| GCAAATACTTTAGCATGCTT+AGG | + | tig0024171:1747-1766 | Msa1415050:intron | 35.0% | |
| !! | TAGCGAGAATTGTTTTGTAC+AGG | + | tig0024171:1857-1876 | Msa1415050:intron | 35.0% |
| !! | AGCGAGAATTGTTTTGTACA+GGG | + | tig0024171:1858-1877 | Msa1415050:intron | 35.0% |
| !! | TTGTGTTTGTTGGGTTTTTC+TGG | + | tig0024171:1887-1906 | Msa1415050:intron | 35.0% |
| TTCAGTTGCGTTTAATCCAA+TGG | + | tig0024171:1966-1985 | Msa1415050:intron | 35.0% | |
| CTTAAGTACAGTCATGATAG+AGG | + | tig0024171:2020-2039 | Msa1415050:intron | 35.0% | |
| AATTCTGCACTGTCAAAAGA+AGG | - | tig0024171:2226-2245 | None:intergenic | 35.0% | |
| GATGCTATTGGCAGATTAAA+GGG | + | tig0024171:2288-2307 | Msa1415050:intron | 35.0% | |
| ATTTACATCTCAAACAGCAC+GGG | - | tig0024171:2384-2403 | None:intergenic | 35.0% | |
| GATTTACATCTCAAACAGCA+CGG | - | tig0024171:2385-2404 | None:intergenic | 35.0% | |
| TCCATTCTGATGTGAAAACA+CGG | - | tig0024171:2463-2482 | None:intergenic | 35.0% | |
| !! | CAGAATGGATTATAAAGTGG+TGG | + | tig0024171:2474-2493 | Msa1415050:intron | 35.0% |
| !! | AATGGATTATAAAGTGGTGG+AGG | + | tig0024171:2477-2496 | Msa1415050:intron | 35.0% |
| GTGGATAAAAGCTAGAGTTA+AGG | + | tig0024171:2522-2541 | Msa1415050:intron | 35.0% | |
| GGATAAAAGCTAGAGTTAAG+GGG | + | tig0024171:2524-2543 | Msa1415050:intron | 35.0% | |
| !! | TGCATGACCTTTAATTTGTC+TGG | + | tig0024171:2568-2587 | Msa1415050:intron | 35.0% |
| !! | GCATGACCTTTAATTTGTCT+GGG | + | tig0024171:2569-2588 | Msa1415050:intron | 35.0% |
| !! | CATGACCTTTAATTTGTCTG+GGG | + | tig0024171:2570-2589 | Msa1415050:intron | 35.0% |
| GTTGTTGTGCTAACTCAAAT+TGG | + | tig0024171:2707-2726 | Msa1415050:intron | 35.0% | |
| GGTTATGTAGGATACAGATT+GGG | + | tig0024171:2796-2815 | Msa1415050:intron | 35.0% | |
| AGCCGAAATCAACAATATCT+AGG | - | tig0024171:2975-2994 | None:intergenic | 35.0% | |
| AATCACTTGTGAGACAGTTT+AGG | - | tig0024171:3073-3092 | None:intergenic | 35.0% | |
| ATGGTTGTAAGGGAATTAAC+TGG | + | tig0024171:3297-3316 | Msa1415050:CDS | 35.0% | |
| !!! | TCATTCTAGTTTTGTTGCAC+TGG | + | tig0024171:3339-3358 | Msa1415050:intron | 35.0% |
| !! | GTATCTATTTTGGAAAGCCA+AGG | + | tig0024171:3499-3518 | Msa1415050:CDS | 35.0% |
| !! | ATCTATTTTGGAAAGCCAAG+GGG | + | tig0024171:3501-3520 | Msa1415050:CDS | 35.0% |
| !! | AATCTCTTCGCCATTTTCAT+TGG | - | tig0024171:3535-3554 | None:intergenic | 35.0% |
| AATGAAAATGGCGAAGAGAT+TGG | + | tig0024171:3534-3553 | Msa1415050:CDS | 35.0% | |
| AAATGGGACTAAAGATCCTA+TGG | - | tig0024171:3624-3643 | None:intergenic | 35.0% | |
| TGGAATTAACATTGTCTAGG+AGG | + | tig0024171:3665-3684 | Msa1415050:intron | 35.0% | |
| GGAATTAACATTGTCTAGGA+GGG | + | tig0024171:3666-3685 | Msa1415050:intron | 35.0% | |
| GAATTAACATTGTCTAGGAG+GGG | + | tig0024171:3667-3686 | Msa1415050:intron | 35.0% | |
| AATTAACATTGTCTAGGAGG+GGG | + | tig0024171:3668-3687 | Msa1415050:intron | 35.0% | |
| AGCAATGTTAAATGCAACAC+GGG | - | tig0024171:3859-3878 | None:intergenic | 35.0% | |
| GAGCAATGTTAAATGCAACA+CGG | - | tig0024171:3860-3879 | None:intergenic | 35.0% | |
| GTGTTGCATTTAACATTGCT+CGG | + | tig0024171:3859-3878 | Msa1415050:CDS | 35.0% | |
| CTTTACAGGACATCAAACAA+GGG | - | tig0024171:4050-4069 | None:intergenic | 35.0% | |
| TCTTTACAGGACATCAAACA+AGG | - | tig0024171:4051-4070 | None:intergenic | 35.0% | |
| GTTTGATGTCCTGTAAAGAT+TGG | + | tig0024171:4052-4071 | Msa1415050:intron | 35.0% | |
| GATATTCTGTTTAGATTGGG+TGG | + | tig0024171:4195-4214 | Msa1415050:intron | 35.0% | |
| AAAGAAGTTGCCTCATCATA+AGG | - | tig0024171:4229-4248 | None:intergenic | 35.0% | |
| AAATATGACAGCCTTTAGCT+TGG | + | tig0024171:4502-4521 | Msa1415050:intron | 35.0% | |
| !! | TTCTGTTGATAACTAACCCA+TGG | + | tig0024171:4680-4699 | Msa1415050:intron | 35.0% |
| ATCATATACATTCCCACCAT+GGG | - | tig0024171:4699-4718 | None:intergenic | 35.0% | |
| TATCATATACATTCCCACCA+TGG | - | tig0024171:4700-4719 | None:intergenic | 35.0% | |
| TGATGATACTGTACTGTGAT+AGG | + | tig0024171:4834-4853 | Msa1415050:intron | 35.0% | |
| !!! | GCATGTTTTGGCTTCTTTAA+CGG | + | tig0024171:4983-5002 | Msa1415050:intron | 35.0% |
| ! | TACTCTTTTCCTCCAAAACA+TGG | - | tig0024171:5079-5098 | None:intergenic | 35.0% |
| TCAGACGAAATATTGTCTCA+AGG | + | tig0024171:5256-5275 | Msa1415050:intron | 35.0% | |
| ACGAAATATTGTCTCAAGGA+TGG | + | tig0024171:5260-5279 | Msa1415050:intron | 35.0% | |
| GCGAAATCAATAATACTGCA+TGG | - | tig0024171:5523-5542 | None:intergenic | 35.0% | |
| TGTATAGGTTCAAAAAGTCC+AGG | - | tig0024171:5579-5598 | None:intergenic | 35.0% | |
| ! | GGACTTTTTGAACCTATACA+TGG | + | tig0024171:5579-5598 | Msa1415050:CDS | 35.0% |
| !!! | GCTGCTATGCTTTTGAAATA+TGG | + | tig0024171:5744-5763 | Msa1415050:CDS | 35.0% |
| ACTGCTGACATATATTCTGA+TGG | + | tig0024171:5837-5856 | Msa1415050:CDS | 35.0% | |
| GAAGTTAAGCAATGCTCTAA+TGG | - | tig0024171:5989-6008 | None:intergenic | 35.0% | |
| TCAAATAGCGGCTATAGTAT+AGG | - | tig0024171:6191-6210 | None:intergenic | 35.0% | |
| TAAATTGTAGGACCCATTCT+AGG | - | tig0024171:6271-6290 | None:intergenic | 35.0% | |
| !! | GTTGCACCGTTTTAAATTGT+AGG | - | tig0024171:6283-6302 | None:intergenic | 35.0% |
| ! | CAACAGTTTTTATACATGGC+TGG | + | tig0024171:6331-6350 | Msa1415050:intron | 35.0% |
| !!! | TTTTAGGGCTTTGTTTGTCT+TGG | + | tig0024171:6656-6675 | Msa1415050:three_prime_UTR | 35.0% |
| !! | TCATATGCGGTTTTGTATGT+TGG | + | tig0024171:6740-6759 | Msa1415050:three_prime_UTR | 35.0% |
| ! | TTCAAGTTTGGAGAGTACAT+AGG | - | tig0024171:6779-6798 | None:intergenic | 35.0% |
| TCCAAACTTGAATTGAACCT+GGG | + | tig0024171:6787-6806 | Msa1415050:three_prime_UTR | 35.0% | |
| TATTATAACATGCGTCGTGA+GGG | - | tig0024171:6829-6848 | None:intergenic | 35.0% | |
| GAACAATGATATGTAGAGGT+TGG | + | tig0024171:6852-6871 | Msa1415050:three_prime_UTR | 35.0% | |
| AGTAGCTTCTATCTCAGAAT+GGG | - | tig0024171:6889-6908 | None:intergenic | 35.0% | |
| AAGTAGCTTCTATCTCAGAA+TGG | - | tig0024171:6890-6909 | None:intergenic | 35.0% | |
| AGAACATGAGTGAGTGAGAA+GGG | - | tig0024171:690-709 | None:intergenic | 40.0% | |
| !!! | GAAAATGAAAGGGTTTTGGG+TGG | - | tig0024171:775-794 | None:intergenic | 40.0% |
| ! | GTGCGAAAATGAAAGGGTTT+TGG | - | tig0024171:779-798 | None:intergenic | 40.0% |
| AAGTGGGTGCGAAAATGAAA+GGG | - | tig0024171:785-804 | None:intergenic | 40.0% | |
| TAAGTGGGTGCGAAAATGAA+AGG | - | tig0024171:786-805 | None:intergenic | 40.0% | |
| TACAAAATCACTCTCCTTCC+CGG | + | tig0024171:863-882 | Msa1415050:CDS | 40.0% | |
| ! | TTTCAAGAGAAGCTTTTGGG+TGG | + | tig0024171:1057-1076 | Msa1415050:CDS | 40.0% |
| !! | GAAAGAGTGTCATCAGGTAA+AGG | - | tig0024171:1108-1127 | None:intergenic | 40.0% |
| CAATCTGATGCTGTTCTTCT+TGG | + | tig0024171:1138-1157 | Msa1415050:CDS | 40.0% | |
| ! | AAACATTTGAAGCCAGAGAC+TGG | + | tig0024171:1285-1304 | Msa1415050:CDS | 40.0% |
| GATTGCTTCAGTTACGAGAA+GGG | + | tig0024171:1307-1326 | Msa1415050:CDS | 40.0% | |
| AATAAGAAATGGCACAGTGG+TGG | + | tig0024171:1724-1743 | Msa1415050:intron | 40.0% | |
| ATAAGAAATGGCACAGTGGT+GGG | + | tig0024171:1725-1744 | Msa1415050:intron | 40.0% | |
| ! | TTTAGCATGCTTAGGTATCG+TGG | + | tig0024171:1755-1774 | Msa1415050:intron | 40.0% |
| ! | TTAGCATGCTTAGGTATCGT+GGG | + | tig0024171:1756-1775 | Msa1415050:intron | 40.0% |
| GTTGTAAAAGGTCTGTACGT+AGG | + | tig0024171:1782-1801 | Msa1415050:intron | 40.0% | |
| TAAAAGGTCTGTACGTAGGA+AGG | + | tig0024171:1786-1805 | Msa1415050:intron | 40.0% | |
| !! | GCGAGAATTGTTTTGTACAG+GGG | + | tig0024171:1859-1878 | Msa1415050:intron | 40.0% |
| !! | AGGGGTTGTTTTGTGTTTGT+TGG | + | tig0024171:1877-1896 | Msa1415050:intron | 40.0% |
| !! | GGGGTTGTTTTGTGTTTGTT+GGG | + | tig0024171:1878-1897 | Msa1415050:intron | 40.0% |
| AGTTGCGTTTAATCCAATGG+TGG | + | tig0024171:1969-1988 | Msa1415050:intron | 40.0% | |
| TTCAAAGCACAGAGAAGAAG+AGG | - | tig0024171:2068-2087 | None:intergenic | 40.0% | |
| GCAGTAGTAGCAGTGAATTT+GGG | + | tig0024171:2094-2113 | Msa1415050:intron | 40.0% | |
| CCTTGAACCAAACACTGTTA+TGG | - | tig0024171:2186-2205 | None:intergenic | 40.0% | |
| ! | CCATAACAGTGTTTGGTTCA+AGG | + | tig0024171:2183-2202 | Msa1415050:intron | 40.0% |
| TGTAGTGGTTATCCGAATCT+CGG | + | tig0024171:2260-2279 | Msa1415050:intron | 40.0% | |
| GGATGCTATTGGCAGATTAA+AGG | + | tig0024171:2287-2306 | Msa1415050:intron | 40.0% | |
| TATTGGCAGATTAAAGGGTC+TGG | + | tig0024171:2293-2312 | Msa1415050:intron | 40.0% | |
| ! | TCCGTGTTTTCACATCAGAA+TGG | + | tig0024171:2459-2478 | Msa1415050:intron | 40.0% |
| AAGCTAGAGTTAAGGGGTTA+TGG | + | tig0024171:2530-2549 | Msa1415050:intron | 40.0% | |
| GTTAAGGGGTTATGGCATAT+TGG | + | tig0024171:2538-2557 | Msa1415050:intron | 40.0% | |
| ATCAGCCCCAGACAAATTAA+AGG | - | tig0024171:2578-2597 | None:intergenic | 40.0% | |
| TTAGCACAACAACTTCCTGT+TGG | - | tig0024171:2700-2719 | None:intergenic | 40.0% | |
| GGGTTATGTAGGATACAGAT+TGG | + | tig0024171:2795-2814 | Msa1415050:intron | 40.0% | |
| TTTGGCATGTGTCAGTCTTT+GGG | + | tig0024171:2849-2868 | Msa1415050:intron | 40.0% | |
| ! | TTGGCTTTCTGTTATGTTGC+TGG | + | tig0024171:2915-2934 | Msa1415050:intron | 40.0% |
| ! | TGCTTCAACTTTGAAGAGAG+AGG | + | tig0024171:3254-3273 | Msa1415050:CDS | 40.0% |
| GGTTGATCTCATGGTTGTAA+GGG | + | tig0024171:3287-3306 | Msa1415050:CDS | 40.0% | |
| GTTGTAAGGGAATTAACTGG+AGG | + | tig0024171:3300-3319 | Msa1415050:CDS | 40.0% | |
| AATAGGATCGCAACAAGACT+CGG | - | tig0024171:3469-3488 | None:intergenic | 40.0% | |
| !! | TGCGATCCTATTTGTTGTTC+AGG | + | tig0024171:3477-3496 | Msa1415050:intron | 40.0% |
| ! | GGCTTTGGTACCAATGAAAA+TGG | + | tig0024171:3522-3541 | Msa1415050:CDS | 40.0% |
| TGAGATTTATGCTGCACATG+AGG | + | tig0024171:3566-3585 | Msa1415050:CDS | 40.0% | |
| ! | TGCTATTACAAATGGTGGTG+TGG | + | tig0024171:3594-3613 | Msa1415050:intron | 40.0% |
| ! | GCTATTACAAATGGTGGTGT+GGG | + | tig0024171:3595-3614 | Msa1415050:intron | 40.0% |
| TGACAAAGCCAATGTTCTAG+AGG | + | tig0024171:3908-3927 | Msa1415050:CDS | 40.0% | |
| !! | GTTCTAGAGGTAATTATCGC+TGG | + | tig0024171:3921-3940 | Msa1415050:intron | 40.0% |
| CAAACAAGGGCAGATTCATT+TGG | - | tig0024171:4037-4056 | None:intergenic | 40.0% | |
| TTGCCTCATCATAAGGTCTA+CGG | - | tig0024171:4222-4241 | None:intergenic | 40.0% | |
| !! | TGTTGATAACTAACCCATGG+TGG | + | tig0024171:4683-4702 | Msa1415050:intron | 40.0% |
| !! | GTTGATAACTAACCCATGGT+GGG | + | tig0024171:4684-4703 | Msa1415050:intron | 40.0% |
| TAACCACATCTGAATTCACC+AGG | + | tig0024171:5050-5069 | Msa1415050:intron | 40.0% | |
| !!! | GTTTTGGAGGAAAAGAGTAG+TGG | + | tig0024171:5080-5099 | Msa1415050:CDS | 40.0% |
| ACTTGTTCGCTATCCAAAAC+AGG | + | tig0024171:5167-5186 | Msa1415050:CDS | 40.0% | |
| ! | TTCAATAAGCGGACCTGTTT+TGG | - | tig0024171:5183-5202 | None:intergenic | 40.0% |
| ! | TCAATGATCACCGGAAGTAT+TGG | + | tig0024171:5377-5396 | Msa1415050:CDS | 40.0% |
| !! | CAATGATCACCGGAAGTATT+GGG | + | tig0024171:5378-5397 | Msa1415050:CDS | 40.0% |
| TTATTATTGGATCAGGGACC+TGG | + | tig0024171:5558-5577 | Msa1415050:intron | 40.0% | |
| ! | ATATGGTCTTGGAGAAGTAG+AGG | + | tig0024171:5761-5780 | Msa1415050:CDS | 40.0% |
| GGCAACTAGATTTAACCTGA+CGG | + | tig0024171:6352-6371 | Msa1415050:intron | 40.0% | |
| !! | TCTTAAAGAGTATCACCGTC+AGG | - | tig0024171:6370-6389 | None:intergenic | 40.0% |
| TTGTGTGTTAATGCAGAAGC+TGG | + | tig0024171:6537-6556 | Msa1415050:intron | 40.0% | |
| CTGGTAGGATGCAAACAATT+AGG | + | tig0024171:6556-6575 | Msa1415050:CDS | 40.0% | |
| AGGTGAAGAGATACTGAAGT+CGG | + | tig0024171:6576-6595 | Msa1415050:CDS | 40.0% | |
| TTAAAATCACACTGCTGCAG+CGG | - | tig0024171:6620-6639 | None:intergenic | 40.0% | |
| !! | AGAGCTTTGGCTTTCATATG+CGG | + | tig0024171:6727-6746 | Msa1415050:three_prime_UTR | 40.0% |
| ! | GTTTGGAGAGTACATAGGTT+GGG | - | tig0024171:6774-6793 | None:intergenic | 40.0% |
| ! | AGTTTGGAGAGTACATAGGT+TGG | - | tig0024171:6775-6794 | None:intergenic | 40.0% |
| CTCCAAACTTGAATTGAACC+TGG | + | tig0024171:6786-6805 | Msa1415050:three_prime_UTR | 40.0% | |
| CCAAACTTGAATTGAACCTG+GGG | + | tig0024171:6788-6807 | Msa1415050:three_prime_UTR | 40.0% | |
| GAACCTGGGGATTATTAGTT+AGG | + | tig0024171:6801-6820 | Msa1415050:three_prime_UTR | 40.0% | |
| ATTATAACATGCGTCGTGAG+GGG | - | tig0024171:6828-6847 | None:intergenic | 40.0% | |
| CTATTATAACATGCGTCGTG+AGG | - | tig0024171:6830-6849 | None:intergenic | 40.0% | |
| CACGACGCATGTTATAATAG+CGG | + | tig0024171:6830-6849 | Msa1415050:three_prime_UTR | 40.0% | |
| AGCGGAACAATGATATGTAG+AGG | + | tig0024171:6848-6867 | Msa1415050:three_prime_UTR | 40.0% | |
| AGCTACTTGTGACAAATCCA+TGG | + | tig0024171:6902-6921 | Msa1415050:three_prime_UTR | 40.0% | |
| GCTACTTGTGACAAATCCAT+GGG | + | tig0024171:6903-6922 | Msa1415050:three_prime_UTR | 40.0% | |
| CTACTTGTGACAAATCCATG+GGG | + | tig0024171:6904-6923 | Msa1415050:three_prime_UTR | 40.0% | |
| ATTCCCTGCACTATTAATGC+TGG | + | tig0024171:7031-7050 | Msa1415050:three_prime_UTR | 40.0% | |
| TTCCCTGCACTATTAATGCT+GGG | + | tig0024171:7032-7051 | Msa1415050:three_prime_UTR | 40.0% | |
| GAGAACATGAGTGAGTGAGA+AGG | - | tig0024171:691-710 | None:intergenic | 45.0% | |
| !! | TGTGAGTGATTCGGTTTCTG+CGG | - | tig0024171:716-735 | None:intergenic | 45.0% |
| ACGAACCTCCGTAAGATGTT+CGG | + | tig0024171:814-833 | Msa1415050:CDS | 45.0% | |
| !!! | GGAACGTTTTGAAGAAGGGA+CGG | - | tig0024171:843-862 | None:intergenic | 45.0% |
| ! | GGGAAGGAGAGTGATTTTGT+AGG | - | tig0024171:864-883 | None:intergenic | 45.0% |
| !! | TTCTTCTTGGTGCCATTGGA+GGG | + | tig0024171:1151-1170 | Msa1415050:CDS | 45.0% |
| AACTGAAGCAATCCAGTCTC+TGG | - | tig0024171:1300-1319 | None:intergenic | 45.0% | |
| GGATTGCTTCAGTTACGAGA+AGG | + | tig0024171:1306-1325 | Msa1415050:CDS | 45.0% | |
| ! | TAGCATGCTTAGGTATCGTG+GGG | + | tig0024171:1757-1776 | Msa1415050:intron | 45.0% |
| TATCGTGGGGGAGTTGTAAA+AGG | + | tig0024171:1770-1789 | Msa1415050:intron | 45.0% | |
| TGCTATCAACCCACTATCCA+TGG | - | tig0024171:1817-1836 | None:intergenic | 45.0% | |
| GTGCGGGAAGAGTTATTGTA+GGG | + | tig0024171:1912-1931 | Msa1415050:intron | 45.0% | |
| TGCGGGAAGAGTTATTGTAG+GGG | + | tig0024171:1913-1932 | Msa1415050:intron | 45.0% | |
| ! | AGATGTATCGGCCAATATCG+CGG | + | tig0024171:1943-1962 | Msa1415050:intron | 45.0% |
| TATACTGACACAGCCACCAT+TGG | - | tig0024171:1985-2004 | None:intergenic | 45.0% | |
| TGGTGGCTGTGTCAGTATAA+TGG | + | tig0024171:1986-2005 | Msa1415050:intron | 45.0% | |
| TGTGTCAGTATAATGGCAGC+AGG | + | tig0024171:1993-2012 | Msa1415050:intron | 45.0% | |
| GTGTCAGTATAATGGCAGCA+GGG | + | tig0024171:1994-2013 | Msa1415050:intron | 45.0% | |
| GTACAGTCATGATAGAGGTC+AGG | + | tig0024171:2025-2044 | Msa1415050:intron | 45.0% | |
| !! | TTCTCTGTGCTTTGAAGTCG+AGG | + | tig0024171:2072-2091 | Msa1415050:intron | 45.0% |
| GGCAGTAGTAGCAGTGAATT+TGG | + | tig0024171:2093-2112 | Msa1415050:intron | 45.0% | |
| TGCAGGTAGTAGAGGGAATA+GGG | + | tig0024171:2119-2138 | Msa1415050:intron | 45.0% | |
| ! | AGGGATTCTTTTGAGCTGCA+AGG | + | tig0024171:2138-2157 | Msa1415050:intron | 45.0% |
| GGTTATCCGAATCTCGGAAA+CGG | + | tig0024171:2266-2285 | Msa1415050:intron | 45.0% | |
| TAGCATCCGTTTCCGAGATT+CGG | - | tig0024171:2275-2294 | None:intergenic | 45.0% | |
| ATCTCGGAAACGGATGCTAT+TGG | + | tig0024171:2276-2295 | Msa1415050:intron | 45.0% | |
| ATTAAAGGGTCTGGTGTGGA+GGG | + | tig0024171:2302-2321 | Msa1415050:intron | 45.0% | |
| AGGGTTTATCCTCGGTATCT+TGG | + | tig0024171:2321-2340 | Msa1415050:intron | 45.0% | |
| TTATCCTCGGTATCTTGGAG+CGG | + | tig0024171:2326-2345 | Msa1415050:intron | 45.0% | |
| TAAATCCCAACCTTCTGAGC+TGG | + | tig0024171:2399-2418 | Msa1415050:intron | 45.0% | |
| AGGAAACTAAAGCGATGGTG+TGG | + | tig0024171:2497-2516 | Msa1415050:intron | 45.0% | |
| AAACTAAAGCGATGGTGTGG+AGG | + | tig0024171:2500-2519 | Msa1415050:intron | 45.0% | |
| !! | TTTTCTGGTGCTAATGGTCG+AGG | + | tig0024171:2616-2635 | Msa1415050:intron | 45.0% |
| GAGGTGAAATCTGATTCTGC+AGG | + | tig0024171:2635-2654 | Msa1415050:intron | 45.0% | |
| ! | TGCAGGTTGTGTTTTCTCTC+TGG | + | tig0024171:2652-2671 | Msa1415050:intron | 45.0% |
| ! | GCAGGTTGTGTTTTCTCTCT+GGG | + | tig0024171:2653-2672 | Msa1415050:intron | 45.0% |
| ! | CAGGTTGTGTTTTCTCTCTG+GGG | + | tig0024171:2654-2673 | Msa1415050:intron | 45.0% |
| !!! | TGGGGTGTTTTTGAGTTTGC+TGG | + | tig0024171:2672-2691 | Msa1415050:intron | 45.0% |
| TGCTAACTCAAATTGGGACG+AGG | + | tig0024171:2714-2733 | Msa1415050:intron | 45.0% | |
| !!! | GGACGAGGTATTTTAGCTCT+TGG | + | tig0024171:2729-2748 | Msa1415050:intron | 45.0% |
| AGATTGGGTGTGAGCTGATT+TGG | + | tig0024171:2811-2830 | Msa1415050:intron | 45.0% | |
| TGGATTTGTGCAGTGCTCTT+TGG | + | tig0024171:2831-2850 | Msa1415050:intron | 45.0% | |
| CTTTGGCATGTGTCAGTCTT+TGG | + | tig0024171:2848-2867 | Msa1415050:intron | 45.0% | |
| ! | CATGTGTCAGTCTTTGGGTT+TGG | + | tig0024171:2854-2873 | Msa1415050:intron | 45.0% |
| AGACAGTTTAGGAGAGCTCA+TGG | - | tig0024171:3062-3081 | None:intergenic | 45.0% | |
| TTTGAAGAGAGAGGTTGCTG+AGG | + | tig0024171:3263-3282 | Msa1415050:CDS | 45.0% | |
| TTGAAGAGAGAGGTTGCTGA+GGG | + | tig0024171:3264-3283 | Msa1415050:CDS | 45.0% | |
| ! | GGGTTGATCTCATGGTTGTA+AGG | + | tig0024171:3286-3305 | Msa1415050:CDS | 45.0% |
| TAAATGCAACACGGGCAATG+CGG | - | tig0024171:3851-3870 | None:intergenic | 45.0% | |
| TTTAACATTGCTCGGAAGCG+TGG | + | tig0024171:3867-3886 | Msa1415050:CDS | 45.0% | |
| AACCACTTGGTCATGAGATC+CGG | + | tig0024171:4553-4572 | Msa1415050:intron | 45.0% | |
| ATGCCTGGTGAATTCAGATG+TGG | - | tig0024171:5056-5075 | None:intergenic | 45.0% | |
| ! | TTCACCAGGCATCCATGTTT+TGG | + | tig0024171:5064-5083 | Msa1415050:intron | 45.0% |
| ATGTGTGAGAGCTCAACATC+AGG | - | tig0024171:5123-5142 | None:intergenic | 45.0% | |
| TGGCGACATATTATCTGACG+AGG | + | tig0024171:5352-5371 | Msa1415050:CDS | 45.0% | |
| !! | AGGAAGCATCCCAATACTTC+CGG | - | tig0024171:5390-5409 | None:intergenic | 45.0% |
| ! | ATTTTCGTACCGAATCCCCA+AGG | - | tig0024171:5421-5440 | None:intergenic | 45.0% |
| GTAGAAGAAACCAACCTGTC+CGG | - | tig0024171:5622-5641 | None:intergenic | 45.0% | |
| GTTGTTCGCATGTTACCTGA+AGG | - | tig0024171:5661-5680 | None:intergenic | 45.0% | |
| CACTGAGAACAGTGGCAAAT+GGG | - | tig0024171:5725-5744 | None:intergenic | 45.0% | |
| ! | CGAGTGCTTTGAATGTGTGT+TGG | + | tig0024171:6480-6499 | Msa1415050:intron | 45.0% |
| GTGTTAATGCAGAAGCTGGT+AGG | + | tig0024171:6541-6560 | Msa1415050:intron | 45.0% | |
| ! | CCCCAGGTTCAATTCAAGTT+TGG | - | tig0024171:6791-6810 | None:intergenic | 45.0% |
| GGACCTAACTAATAATCCCC+AGG | - | tig0024171:6807-6826 | None:intergenic | 45.0% | |
| TGCCCAGCATTAATAGTGCA+GGG | - | tig0024171:7037-7056 | None:intergenic | 45.0% | |
| !!! | ACGTTTTGAAGAAGGGACGG+TGG | - | tig0024171:840-859 | None:intergenic | 50.0% |
| TTAGCGACGGATACGACTTC+AGG | - | tig0024171:902-921 | None:intergenic | 50.0% | |
| TGAATGTTGGGTACCTACCG+TGG | - | tig0024171:952-971 | None:intergenic | 50.0% | |
| !! | GCAGCAGAAAGAGTGTCATC+AGG | - | tig0024171:1114-1133 | None:intergenic | 50.0% |
| !! | GCTGTTCTTCTTGGTGCCAT+TGG | + | tig0024171:1147-1166 | Msa1415050:CDS | 50.0% |
| !! | GTTCTTCTTGGTGCCATTGG+AGG | + | tig0024171:1150-1169 | Msa1415050:CDS | 50.0% |
| TGCTAATCTCAGACCAGCGA+CGG | + | tig0024171:1341-1360 | Msa1415050:CDS | 50.0% | |
| ! | AGCATGCTTAGGTATCGTGG+GGG | + | tig0024171:1758-1777 | Msa1415050:intron | 50.0% |
| AAGGAGAGGCCATGGATAGT+GGG | + | tig0024171:1805-1824 | Msa1415050:intron | 50.0% | |
| !! | GTTGGGTTTTTCTGGTCGTG+CGG | + | tig0024171:1895-1914 | Msa1415050:intron | 50.0% |
| !! | TTGGGTTTTTCTGGTCGTGC+GGG | + | tig0024171:1896-1915 | Msa1415050:intron | 50.0% |
| CGTGCGGGAAGAGTTATTGT+AGG | + | tig0024171:1911-1930 | Msa1415050:intron | 50.0% | |
| AGGGGAGAGTCGAGATGTAT+CGG | + | tig0024171:1931-1950 | Msa1415050:intron | 50.0% | |
| ACGCAACTGAACCGCGATAT+TGG | - | tig0024171:1957-1976 | None:intergenic | 50.0% | |
| ! | AGCAGTGAATTTGGGAGTGC+AGG | + | tig0024171:2102-2121 | Msa1415050:intron | 50.0% |
| ! | TTTGGGAGTGCAGGTAGTAG+AGG | + | tig0024171:2111-2130 | Msa1415050:intron | 50.0% |
| ! | TTGGGAGTGCAGGTAGTAGA+GGG | + | tig0024171:2112-2131 | Msa1415050:intron | 50.0% |
| GTGCAGGTAGTAGAGGGAAT+AGG | + | tig0024171:2118-2137 | Msa1415050:intron | 50.0% | |
| TTGAGCTGCAAGGTCAGATC+AGG | + | tig0024171:2148-2167 | Msa1415050:intron | 50.0% | |
| ! | ACAGTGTTTGGTTCAAGGCG+AGG | + | tig0024171:2188-2207 | Msa1415050:intron | 50.0% |
| ! | CAGTGTTTGGTTCAAGGCGA+GGG | + | tig0024171:2189-2208 | Msa1415050:intron | 50.0% |
| GCAGATTAAAGGGTCTGGTG+TGG | + | tig0024171:2298-2317 | Msa1415050:intron | 50.0% | |
| GATTAAAGGGTCTGGTGTGG+AGG | + | tig0024171:2301-2320 | Msa1415050:intron | 50.0% | |
| TGGTGTGGAGGGTTTATCCT+CGG | + | tig0024171:2313-2332 | Msa1415050:intron | 50.0% | |
| TGACCACCTGTTGTTCTGCT+TGG | + | tig0024171:2351-2370 | Msa1415050:intron | 50.0% | |
| GACCACCTGTTGTTCTGCTT+GGG | + | tig0024171:2352-2371 | Msa1415050:intron | 50.0% | |
| ACCACCTGTTGTTCTGCTTG+GGG | + | tig0024171:2353-2372 | Msa1415050:intron | 50.0% | |
| TGATCCCCAAGCAGAACAAC+AGG | - | tig0024171:2360-2379 | None:intergenic | 50.0% | |
| GGTGGAGGAAACTAAAGCGA+TGG | + | tig0024171:2492-2511 | Msa1415050:intron | 50.0% | |
| GGGGTTATGGCATATTGGAG+TGG | + | tig0024171:2543-2562 | Msa1415050:intron | 50.0% | |
| !! | TTGAGTTTGCTGGTGCCAAC+AGG | + | tig0024171:2682-2701 | Msa1415050:intron | 50.0% |
| TGAAGAGAGAGGTTGCTGAG+GGG | + | tig0024171:3265-3284 | Msa1415050:CDS | 50.0% | |
| TTTGGAAAGCCAAGGGGCTT+TGG | + | tig0024171:3507-3526 | Msa1415050:CDS | 50.0% | |
| TCATTGGTACCAAAGCCCCT+TGG | - | tig0024171:3519-3538 | None:intergenic | 50.0% | |
| ! | ATGGTGGTGTGGGTTTCCAT+AGG | + | tig0024171:3605-3624 | Msa1415050:intron | 50.0% |
| GGTCCGTAGACCTTATGATG+AGG | + | tig0024171:4216-4235 | Msa1415050:intron | 50.0% | |
| !! | ACCAGGCATCCATGTTTTGG+AGG | + | tig0024171:5067-5086 | Msa1415050:intron | 50.0% |
| TCCTCCAAAACATGGATGCC+TGG | - | tig0024171:5071-5090 | None:intergenic | 50.0% | |
| GACGAGGCTTCAATGATCAC+CGG | + | tig0024171:5368-5387 | Msa1415050:CDS | 50.0% | |
| ! | ATGCTTCCTTCTGCTAGCCT+TGG | + | tig0024171:5401-5420 | Msa1415050:CDS | 50.0% |
| !! | TGCTTCCTTCTGCTAGCCTT+GGG | + | tig0024171:5402-5421 | Msa1415050:CDS | 50.0% |
| !! | TTCTGCTAGCCTTGGGGATT+CGG | + | tig0024171:5409-5428 | Msa1415050:CDS | 50.0% |
| TCGGGTGCAGAACCATGTAT+AGG | - | tig0024171:5594-5613 | None:intergenic | 50.0% | |
| ACCAACCTGTCCGGCAATAT+CGG | - | tig0024171:5613-5632 | None:intergenic | 50.0% | |
| GCACTGAGAACAGTGGCAAA+TGG | - | tig0024171:5726-5745 | None:intergenic | 50.0% | |
| ! | CATAGCAGCACTGAGAACAG+TGG | - | tig0024171:5733-5752 | None:intergenic | 50.0% |
| GTTCTCGAGACACTGAACAG+AGG | + | tig0024171:5807-5826 | Msa1415050:CDS | 50.0% | |
| ! | CGGCTATAGTATAGGCGTTG+CGG | - | tig0024171:6183-6202 | None:intergenic | 50.0% |
| CTGCCCAGCATTAATAGTGC+AGG | - | tig0024171:7038-7057 | None:intergenic | 50.0% | |
| GACGGTGGCCGAACATCTTA+CGG | - | tig0024171:825-844 | None:intergenic | 55.0% | |
| TTCAGGACCTATCCCATCGC+CGG | - | tig0024171:885-904 | None:intergenic | 55.0% | |
| CTTCTCACTGGATCCCTCCA+CGG | + | tig0024171:932-951 | Msa1415050:CDS | 55.0% | |
| TGTTGGGTACCTACCGTGGA+GGG | - | tig0024171:948-967 | None:intergenic | 55.0% | |
| ATGTTGGGTACCTACCGTGG+AGG | - | tig0024171:949-968 | None:intergenic | 55.0% | |
| ! | GGTGCTGCACTTGATGCTAC+TGG | + | tig0024171:1078-1097 | Msa1415050:CDS | 55.0% |
| GGTCTGTACGTAGGAAGGAG+AGG | + | tig0024171:1791-1810 | Msa1415050:intron | 55.0% | |
| TACGTAGGAAGGAGAGGCCA+TGG | + | tig0024171:1797-1816 | Msa1415050:intron | 55.0% | |
| GAAGGAGAGGCCATGGATAG+TGG | + | tig0024171:1804-1823 | Msa1415050:intron | 55.0% | |
| CATTCCGCTCCAAGATACCG+AGG | - | tig0024171:2333-2352 | None:intergenic | 55.0% | |
| TCCCCAAGCAGAACAACAGG+TGG | - | tig0024171:2357-2376 | None:intergenic | 55.0% | |
| CTGCACCAGCTCAGAAGGTT+GGG | - | tig0024171:2407-2426 | None:intergenic | 55.0% | |
| CTAAGCTGCACCAGCTCAGA+AGG | - | tig0024171:2412-2431 | None:intergenic | 55.0% | |
| CTAAAGCGATGGTGTGGAGG+TGG | + | tig0024171:2503-2522 | Msa1415050:intron | 55.0% | |
| GAAGAGAGAGGTTGCTGAGG+GGG | + | tig0024171:3266-3285 | Msa1415050:CDS | 55.0% | |
| ! | TGCTGAGGGGGTTGATCTCA+TGG | + | tig0024171:3278-3297 | Msa1415050:CDS | 55.0% |
| ! | GATCGCAACAAGACTCGGTC+AGG | - | tig0024171:3464-3483 | None:intergenic | 55.0% |
| ! | AACATTGCTCGGAAGCGTGG+TGG | + | tig0024171:3870-3889 | Msa1415050:CDS | 55.0% |
| ! | ACATTGCTCGGAAGCGTGGT+GGG | + | tig0024171:3871-3890 | Msa1415050:CDS | 55.0% |
| CACCGGATCTCATGACCAAG+TGG | - | tig0024171:4558-4577 | None:intergenic | 55.0% | |
| CACTTGGTCATGAGATCCGG+TGG | + | tig0024171:4556-4575 | Msa1415050:intron | 55.0% | |
| !! | GCTTCCTTCTGCTAGCCTTG+GGG | + | tig0024171:5403-5422 | Msa1415050:CDS | 55.0% |
| GAATCCCCAAGGCTAGCAGA+AGG | - | tig0024171:5410-5429 | None:intergenic | 55.0% | |
| GGTTCTGCACCCGATATTGC+CGG | + | tig0024171:5600-5619 | Msa1415050:CDS | 55.0% | |
| CCAACCTGTCCGGCAATATC+GGG | - | tig0024171:5612-5631 | None:intergenic | 55.0% | |
| GGTGGCCGAACATCTTACGG+AGG | - | tig0024171:822-841 | None:intergenic | 60.0% | |
| ATCACTCTCCTTCCCGGCGA+TGG | + | tig0024171:869-888 | Msa1415050:CDS | 60.0% | |
| TCACTCTCCTTCCCGGCGAT+GGG | + | tig0024171:870-889 | Msa1415050:CDS | 60.0% | |
| TCAGGACCTATCCCATCGCC+GGG | - | tig0024171:884-903 | None:intergenic | 60.0% | |
| TCACTGGATCCCTCCACGGT+AGG | + | tig0024171:936-955 | Msa1415050:intron | 60.0% | |
| ACCAGCGACGGTGTTTCCAC+AGG | + | tig0024171:1353-1372 | Msa1415050:CDS | 60.0% | |
| ACCTGTGGAAACACCGTCGC+TGG | - | tig0024171:1357-1376 | None:intergenic | 60.0% | |
| ! | TGGTTCAAGGCGAGGGCATG+AGG | + | tig0024171:2196-2215 | Msa1415050:intron | 60.0% |
| ! | TTCAAGGCGAGGGCATGAGG+TGG | + | tig0024171:2199-2218 | Msa1415050:intron | 60.0% |
| GCTGCACCAGCTCAGAAGGT+TGG | - | tig0024171:2408-2427 | None:intergenic | 60.0% | |
| CACGGGCAATGCGGTCAATC+TGG | - | tig0024171:3842-3861 | None:intergenic | 60.0% | |
| TGCACCCGATATTGCCGGAC+AGG | + | tig0024171:5605-5624 | Msa1415050:CDS | 60.0% | |
| CCCGATATTGCCGGACAGGT+TGG | + | tig0024171:5609-5628 | Msa1415050:intron | 60.0% | |
| AATCACACTGCTGCAGCGGC+TGG | - | tig0024171:6616-6635 | None:intergenic | 60.0% | |
| CTCCTTCCCGGCGATGGGAT+AGG | + | tig0024171:875-894 | Msa1415050:CDS | 65.0% | |
| GACCTATCCCATCGCCGGGA+AGG | - | tig0024171:880-899 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024171 | gene | 551 | 7188 | 551 | ID=Msa1415050;Name=Msa1415050 |
| tig0024171 | mRNA | 551 | 7188 | 551 | ID=Msa1415050-mRNA-1;Parent=Msa1415050;Name=Msa1415050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=192|1|1|1|1|1|11|555|405 |
| tig0024171 | exon | 551 | 953 | 551 | ID=Msa1415050-mRNA-1:exon:22152;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 1043 | 1172 | 1043 | ID=Msa1415050-mRNA-1:exon:22153;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 1263 | 1374 | 1263 | ID=Msa1415050-mRNA-1:exon:22154;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 3246 | 3321 | 3246 | ID=Msa1415050-mRNA-1:exon:22155;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 3499 | 3587 | 3499 | ID=Msa1415050-mRNA-1:exon:22156;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 3843 | 3929 | 3843 | ID=Msa1415050-mRNA-1:exon:22157;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 5072 | 5188 | 5072 | ID=Msa1415050-mRNA-1:exon:22158;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 5323 | 5430 | 5323 | ID=Msa1415050-mRNA-1:exon:22159;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 5573 | 5626 | 5573 | ID=Msa1415050-mRNA-1:exon:22160;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 5711 | 5863 | 5711 | ID=Msa1415050-mRNA-1:exon:22161;Parent=Msa1415050-mRNA-1 |
| tig0024171 | exon | 6553 | 7188 | 6553 | ID=Msa1415050-mRNA-1:exon:22162;Parent=Msa1415050-mRNA-1 |
| tig0024171 | five_prime_UTR | 551 | 742 | 551 | ID=Msa1415050-mRNA-1:five_prime_utr;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 743 | 953 | 743 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 1043 | 1172 | 1043 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 1263 | 1374 | 1263 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 3246 | 3321 | 3246 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 3499 | 3587 | 3499 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 3843 | 3929 | 3843 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 5072 | 5188 | 5072 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 5323 | 5430 | 5323 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 5573 | 5626 | 5573 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 5711 | 5863 | 5711 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | CDS | 6553 | 6633 | 6553 | ID=Msa1415050-mRNA-1:cds;Parent=Msa1415050-mRNA-1 |
| tig0024171 | three_prime_UTR | 6634 | 7188 | 6634 | ID=Msa1415050-mRNA-1:three_prime_utr;Parent=Msa1415050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
