AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1417280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1417280 MtrunA17_Chr7g0264631 99.807 519 1 0 1 519 579 1097 0.0 1074
Msa1417280 MtrunA17_Chr7g0264631 27.586 348 244 6 175 518 98 441 8.54e-36 142
Msa1417280 MtrunA17_Chr7g0264631 50.000 102 51 0 2 103 1235 1336 4.92e-25 109
Msa1417280 MtrunA17_Chr1g0180601 93.077 520 35 1 1 519 552 1071 0.0 974
Msa1417280 MtrunA17_Chr1g0180601 27.297 381 264 8 143 518 42 414 2.60e-35 141
Msa1417280 MtrunA17_Chr1g0180601 48.454 97 50 0 2 98 1209 1305 1.05e-22 102
Msa1417280 MtrunA17_Chr6g0453051 47.318 522 257 6 1 518 516 1023 4.80e-158 482
Msa1417280 MtrunA17_Chr6g0453051 28.375 363 255 5 159 518 18 378 1.44e-37 147
Msa1417280 MtrunA17_Chr6g0453051 59.770 87 34 1 1 87 1161 1246 3.62e-25 110
Msa1417280 MtrunA17_Chr5g0410921 42.389 519 275 6 1 518 509 1004 1.86e-130 409
Msa1417280 MtrunA17_Chr5g0410921 25.989 354 248 6 172 518 25 371 2.66e-30 125
Msa1417280 MtrunA17_Chr5g0410921 59.091 88 35 1 1 88 1142 1228 1.47e-24 108
Msa1417280 MtrunA17_Chr3g0123411 40.727 523 299 6 1 517 402 919 3.93e-124 390
Msa1417280 MtrunA17_Chr3g0123411 62.500 88 33 0 1 88 1058 1145 1.31e-26 114
Msa1417280 MtrunA17_Chr3g0123411 27.206 272 180 8 255 517 1 263 2.91e-23 104
Msa1417280 MtrunA17_Chr1g0156821 38.343 519 285 5 1 518 525 1009 1.74e-118 377
Msa1417280 MtrunA17_Chr1g0156821 27.011 348 246 5 175 518 45 388 3.98e-24 107
Msa1417280 MtrunA17_Chr1g0156821 51.042 96 46 1 1 96 1147 1241 1.80e-23 105
Msa1417280 MtrunA17_Chr6g0452041 35.115 524 331 5 1 518 514 1034 2.37e-113 363
Msa1417280 MtrunA17_Chr6g0452041 23.460 341 259 2 177 517 37 375 4.67e-29 122
Msa1417280 MtrunA17_Chr6g0452041 63.218 87 32 0 1 87 1174 1260 5.66e-28 119
Msa1417280 MtrunA17_Chr2g0285191 37.951 527 309 7 1 518 551 1068 7.64e-113 363
Msa1417280 MtrunA17_Chr2g0285191 25.061 407 263 4 152 518 9 413 1.66e-38 150
Msa1417280 MtrunA17_Chr2g0285191 62.222 90 33 1 1 90 1207 1295 5.86e-25 109
Msa1417280 MtrunA17_Chr2g0285311 36.312 526 320 7 1 518 522 1040 2.63e-111 358
Msa1417280 MtrunA17_Chr2g0285311 26.254 339 248 2 180 518 48 384 9.32e-37 145
Msa1417280 MtrunA17_Chr2g0285311 63.333 90 32 1 1 90 1179 1267 2.44e-26 114
Msa1417280 MtrunA17_Chr4g0041871 38.667 525 314 4 1 517 496 1020 3.98e-111 357
Msa1417280 MtrunA17_Chr4g0041871 24.011 354 248 8 177 519 16 359 9.06e-28 118
Msa1417280 MtrunA17_Chr4g0041871 63.218 87 32 0 1 87 1159 1245 3.80e-27 116
Msa1417280 MtrunA17_Chr1g0193991 38.826 528 303 11 1 518 542 1059 1.20e-110 357
Msa1417280 MtrunA17_Chr1g0193991 24.533 375 270 7 150 517 35 403 1.22e-32 133
Msa1417280 MtrunA17_Chr1g0193991 53.333 90 41 1 1 90 1198 1286 5.66e-23 103
Msa1417280 MtrunA17_Chr6g0452171 36.415 530 317 7 1 518 514 1035 3.57e-110 355
Msa1417280 MtrunA17_Chr6g0452171 64.368 87 31 0 1 87 1175 1261 9.89e-29 121
Msa1417280 MtrunA17_Chr6g0452171 23.720 371 261 10 159 517 15 375 8.82e-24 105
Msa1417280 MtrunA17_Chr7g0233901 36.224 519 312 5 1 518 510 1010 4.04e-109 352
Msa1417280 MtrunA17_Chr7g0233901 58.621 87 36 0 1 87 1151 1237 1.95e-26 114
Msa1417280 MtrunA17_Chr7g0233901 23.143 350 262 5 172 517 25 371 2.39e-23 104
Msa1417280 MtrunA17_Chr6g0452111 35.728 529 313 8 1 518 521 1033 6.04e-109 352
Msa1417280 MtrunA17_Chr6g0452111 25.215 349 250 6 175 517 39 382 1.70e-30 126
Msa1417280 MtrunA17_Chr6g0452111 62.500 88 33 0 1 88 1173 1260 6.03e-28 119
Msa1417280 MtrunA17_Chr6g0452141 35.125 521 332 4 1 518 515 1032 8.24e-108 348
Msa1417280 MtrunA17_Chr6g0452141 63.218 87 32 0 1 87 1172 1258 1.10e-27 118
Msa1417280 MtrunA17_Chr6g0452141 21.471 340 265 2 178 517 39 376 3.85e-25 110
Msa1417280 MtrunA17_Chr4g0069401 36.226 530 320 9 1 518 526 1049 1.71e-107 348
Msa1417280 MtrunA17_Chr4g0069401 24.865 370 269 6 154 517 21 387 3.98e-34 137
Msa1417280 MtrunA17_Chr4g0069401 58.889 90 35 1 1 90 1188 1275 1.26e-24 108
Msa1417280 MtrunA17_Chr2g0285301 36.449 535 308 9 1 518 517 1036 4.90e-105 341
Msa1417280 MtrunA17_Chr2g0285301 24.668 377 275 6 149 518 5 379 2.96e-34 138
Msa1417280 MtrunA17_Chr2g0285301 58.621 87 35 1 1 87 1175 1260 5.19e-24 106
Msa1417280 MtrunA17_Chr4g0039821 35.674 527 324 9 1 518 529 1049 9.36e-105 340
Msa1417280 MtrunA17_Chr4g0039821 23.380 355 269 3 164 517 38 390 3.76e-31 128
Msa1417280 MtrunA17_Chr4g0039821 61.446 83 30 1 1 83 1188 1268 2.97e-23 104
Msa1417280 MtrunA17_Chr6g0481921 35.161 529 322 8 1 518 424 942 1.15e-103 336
Msa1417280 MtrunA17_Chr6g0481921 28.727 275 194 2 244 518 14 286 1.49e-31 129
Msa1417280 MtrunA17_Chr6g0481921 62.222 90 33 1 1 90 1081 1169 3.38e-26 113
Msa1417280 MtrunA17_Chr4g0069361 34.981 526 329 7 1 518 531 1051 1.46e-103 337
Msa1417280 MtrunA17_Chr4g0069361 24.225 355 264 5 165 517 41 392 3.46e-33 134
Msa1417280 MtrunA17_Chr4g0069361 58.889 90 35 1 1 90 1190 1277 4.92e-25 109
Msa1417280 MtrunA17_Chr6g0451881 33.781 521 330 6 1 518 514 1022 8.52e-102 332
Msa1417280 MtrunA17_Chr6g0451881 62.069 87 33 0 1 87 1162 1248 1.43e-27 117
Msa1417280 MtrunA17_Chr6g0451881 23.701 308 225 5 214 517 74 375 1.19e-22 102
Msa1417280 MtrunA17_Chr6g0486841 36.961 533 296 6 1 519 512 1018 2.27e-101 331
Msa1417280 MtrunA17_Chr6g0486841 20.528 341 270 1 177 517 34 373 5.93e-23 103
Msa1417280 MtrunA17_Chr6g0486841 52.874 87 39 1 1 87 1155 1239 2.20e-20 95.5
Msa1417280 MtrunA17_Chr6g0452061 33.459 532 318 10 1 518 35 544 9.35e-98 312
Msa1417280 MtrunA17_Chr6g0452061 63.218 87 32 0 1 87 684 770 2.43e-28 119
Msa1417280 MtrunA17_Chr4g0069351 34.601 526 331 7 1 518 531 1051 2.21e-97 320
Msa1417280 MtrunA17_Chr4g0069351 23.324 373 278 6 150 517 23 392 7.45e-33 134
Msa1417280 MtrunA17_Chr4g0069351 59.770 87 33 1 1 87 1190 1274 1.11e-24 108
Msa1417280 MtrunA17_Chr3g0119381 36.174 528 320 8 1 518 552 1072 3.71e-97 320
Msa1417280 MtrunA17_Chr3g0119381 22.689 357 269 6 165 517 60 413 8.67e-33 133
Msa1417280 MtrunA17_Chr3g0119381 61.905 84 30 1 1 84 1211 1292 4.64e-25 110
Msa1417280 MtrunA17_Chr4g0069411 33.843 523 335 6 1 518 549 1065 4.32e-95 314
Msa1417280 MtrunA17_Chr4g0069411 24.868 378 274 7 145 517 38 410 4.29e-30 125
Msa1417280 MtrunA17_Chr4g0069411 56.322 87 36 1 1 87 1204 1288 1.20e-21 99.4
Msa1417280 MtrunA17_Chr3g0138211 33.591 518 319 6 1 518 549 1041 3.17e-94 311
Msa1417280 MtrunA17_Chr3g0138211 54.023 87 38 1 1 87 1192 1276 2.47e-21 98.2
Msa1417280 MtrunA17_Chr3g0138211 23.656 372 271 7 154 517 44 410 9.40e-21 96.7
Msa1417280 MtrunA17_Chr8g0366481 39.718 355 210 2 164 518 51 401 3.05e-92 294
Msa1417280 MtrunA17_Chr8g0366481 57.955 88 36 1 1 88 539 625 2.79e-24 106
Msa1417280 MtrunA17_Chr6g0451911 32.184 522 343 6 1 517 514 1029 3.66e-90 300
Msa1417280 MtrunA17_Chr6g0451911 62.069 87 33 0 1 87 1169 1255 5.03e-28 119
Msa1417280 MtrunA17_Chr6g0451911 20.661 363 282 4 159 517 15 375 6.40e-27 115
Msa1417280 MtrunA17_Chr8g0344651 33.078 523 329 8 1 518 751 1257 3.63e-87 293
Msa1417280 MtrunA17_Chr8g0344651 26.879 346 248 3 175 517 269 612 5.60e-45 170
Msa1417280 MtrunA17_Chr8g0344651 52.747 91 43 0 1 91 1395 1485 9.03e-21 96.7
Msa1417280 MtrunA17_Chr7g0222781 39.058 361 218 2 159 518 811 1170 1.37e-85 288
Msa1417280 MtrunA17_Chr7g0222781 23.209 349 260 4 175 519 78 422 1.29e-26 114
Msa1417280 MtrunA17_Chr7g0222781 43.448 145 70 3 1 138 558 697 2.04e-24 108
Msa1417280 MtrunA17_Chr7g0222781 46.512 86 43 2 1 85 1308 1391 2.39e-11 66.6
Msa1417280 MtrunA17_Chr1g0212701 35.941 409 251 3 120 518 755 1162 2.55e-84 285
Msa1417280 MtrunA17_Chr1g0212701 24.058 345 255 3 175 519 79 416 4.98e-32 131
Msa1417280 MtrunA17_Chr1g0212701 42.581 155 76 5 1 147 552 701 1.27e-23 105
Msa1417280 MtrunA17_Chr1g0212701 48.837 86 41 2 1 85 1300 1383 3.57e-12 69.3
Msa1417280 MtrunA17_Chr3g0128381 31.467 375 239 8 152 516 37 403 6.93e-56 197
Msa1417280 MtrunA17_Chr3g0128381 41.053 95 47 2 1 87 543 636 8.31e-15 77.4
Msa1417280 MtrunA17_Chr1g0194031 36.111 360 215 7 1 352 537 889 1.74e-54 197
Msa1417280 MtrunA17_Chr1g0194031 25.568 352 250 5 172 517 53 398 2.04e-33 135
Msa1417280 MtrunA17_Chr6g0452071 31.718 227 153 2 292 518 4 228 9.77e-37 141
Msa1417280 MtrunA17_Chr6g0452071 62.069 87 33 0 1 87 368 454 8.40e-28 115
Msa1417280 MtrunA17_Chr1g0194001 36.420 162 102 1 357 518 2 162 5.22e-35 135
Msa1417280 MtrunA17_Chr1g0194001 57.534 73 31 0 1 73 301 373 7.50e-22 97.4
Msa1417280 MtrunA17_Chr8g0366471 63.218 87 31 1 1 87 40 125 8.30e-31 117
Msa1417280 MtrunA17_Chr3g0128391 59.551 89 34 1 1 89 468 554 3.51e-24 106
Msa1417280 MtrunA17_Chr3g0128391 26.619 278 187 8 249 519 5 272 2.18e-21 97.8
Msa1417280 MtrunA17_Chr6g0452051 24.497 298 213 5 225 517 6 296 4.82e-24 104
Msa1417280 MtrunA17_Chr8g0366451 24.820 278 201 4 244 518 58 330 6.13e-24 104
Msa1417280 MtrunA17_Chr4g0061601 63.855 83 28 1 1 83 541 621 7.14e-24 105
Msa1417280 MtrunA17_Chr4g0061601 24.513 359 260 7 165 517 48 401 6.19e-17 84.0
Msa1417280 MtrunA17_Chr2g0285231 63.380 71 26 0 1 71 29 99 5.29e-23 93.6
Msa1417280 MtrunA17_Chr2g0300791 37.719 114 65 1 163 276 12 119 2.02e-22 94.0
Msa1417280 MtrunA17_Chr6g0474071 59.036 83 32 1 1 83 368 448 1.89e-21 97.1
Msa1417280 MtrunA17_Chr6g0452081 73.077 52 14 0 1 52 176 227 2.00e-17 81.6
Msa1417280 MtrunA17_Chr7g0227391 48.913 92 38 3 1 87 577 664 2.79e-17 85.1
Msa1417280 MtrunA17_Chr6g0452091 27.014 211 146 4 228 434 17 223 4.52e-17 80.9
Msa1417280 MtrunA17_Chr5g0412741 47.253 91 42 2 1 87 608 696 1.24e-14 77.0
Msa1417280 MtrunA17_Chr5g0412741 21.605 324 186 9 225 516 182 469 1.00e-11 67.8
Msa1417280 MtrunA17_Chr5g0433051 46.512 86 44 1 2 87 618 701 5.73e-13 71.6
Msa1417280 MtrunA17_Chr5g0433071 44.828 87 46 1 2 88 620 704 2.83e-12 69.3
Msa1417280 MtrunA17_Chr2g0285211 32.609 92 61 1 427 518 14 104 3.51e-12 63.5
Msa1417280 MtrunA17_Chr1g0178481 45.679 81 37 1 3 76 536 616 7.83e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1417280 AT2G36910.1 90.944 519 46 1 1 518 521 1039 0.0 963
Msa1417280 AT2G36910.1 28.070 342 238 6 181 518 46 383 7.60e-34 137
Msa1417280 AT2G36910.1 49.038 104 53 0 1 104 1177 1280 6.60e-24 106
Msa1417280 AT3G28860.1 46.857 525 255 6 1 518 518 1025 3.86e-155 474
Msa1417280 AT3G28860.1 27.548 363 258 5 159 518 20 380 6.89e-36 143
Msa1417280 AT3G28860.1 60.920 87 33 1 1 87 1163 1248 1.88e-25 111
Msa1417280 AT1G28010.1 43.629 518 271 4 1 518 525 1021 1.07e-138 431
Msa1417280 AT1G28010.1 26.012 346 253 3 175 518 44 388 1.69e-30 127
Msa1417280 AT1G28010.1 61.364 88 33 1 1 88 1159 1245 1.39e-25 112
Msa1417280 AT4G25960.1 41.040 519 278 6 1 518 554 1045 1.32e-130 410
Msa1417280 AT4G25960.1 25.507 345 243 6 181 518 79 416 3.25e-30 126
Msa1417280 AT4G25960.1 59.091 88 35 1 1 88 1183 1269 1.82e-23 105
Msa1417280 AT1G10680.2 40.541 518 274 7 1 518 514 997 1.31e-128 403
Msa1417280 AT1G10680.2 25.507 345 239 7 181 518 43 376 1.67e-28 120
Msa1417280 AT1G10680.1 40.541 518 274 7 1 518 514 997 1.83e-128 404
Msa1417280 AT1G10680.1 25.507 345 239 7 181 518 43 376 1.65e-28 120
Msa1417280 AT1G10680.1 59.091 88 35 1 1 88 1135 1221 3.31e-25 110
Msa1417280 AT3G28345.1 37.079 534 285 4 1 518 512 1010 1.76e-113 364
Msa1417280 AT3G28345.1 59.770 87 35 0 1 87 1150 1236 9.06e-27 115
Msa1417280 AT3G28345.1 22.899 345 258 4 175 515 31 371 1.12e-23 106
Msa1417280 AT3G28390.1 36.680 518 306 5 1 518 500 995 7.03e-111 357
Msa1417280 AT3G28390.1 23.446 354 253 7 175 519 19 363 1.17e-29 124
Msa1417280 AT3G28390.1 59.770 87 35 0 1 87 1135 1221 5.90e-27 116
Msa1417280 AT3G28415.1 36.994 519 308 6 1 518 491 991 4.11e-110 354
Msa1417280 AT3G28415.1 56.044 91 40 0 1 91 1131 1221 1.45e-26 115
Msa1417280 AT3G28415.1 22.701 348 261 3 172 519 15 354 1.37e-23 105
Msa1417280 AT3G28415.2 36.994 519 308 6 1 518 499 999 6.70e-110 354
Msa1417280 AT3G28415.2 56.044 91 40 0 1 91 1139 1229 1.55e-26 114
Msa1417280 AT3G28415.2 22.571 350 267 3 172 519 15 362 3.04e-26 114
Msa1417280 AT3G28360.1 36.346 520 307 6 1 518 499 996 6.01e-109 352
Msa1417280 AT3G28360.1 58.621 87 36 0 1 87 1136 1222 4.22e-25 110
Msa1417280 AT3G28360.1 22.414 348 260 5 175 517 18 360 1.83e-24 108
Msa1417280 AT3G28380.1 36.923 520 305 7 1 518 512 1010 2.36e-107 347
Msa1417280 AT3G28380.1 24.274 379 265 9 152 517 4 373 3.69e-29 122
Msa1417280 AT3G28380.1 56.322 87 38 0 1 87 1150 1236 8.23e-25 109
Msa1417280 AT1G02520.1 35.038 528 319 8 1 518 534 1047 1.32e-105 343
Msa1417280 AT1G02520.1 25.770 357 257 6 165 517 43 395 1.13e-31 130
Msa1417280 AT1G02520.1 58.889 90 36 1 1 90 1188 1276 2.72e-25 111
Msa1417280 AT1G02520.2 35.038 528 319 8 1 518 534 1047 1.32e-105 343
Msa1417280 AT1G02520.2 25.770 357 257 6 165 517 43 395 1.13e-31 130
Msa1417280 AT1G02520.2 58.889 90 36 1 1 90 1188 1276 2.72e-25 111
Msa1417280 AT1G02520.3 35.038 528 319 8 1 518 534 1047 1.32e-105 343
Msa1417280 AT1G02520.3 25.770 357 257 6 165 517 43 395 1.13e-31 130
Msa1417280 AT1G02520.3 58.889 90 36 1 1 90 1188 1276 2.72e-25 111
Msa1417280 AT1G27940.2 43.220 354 200 1 165 518 453 805 2.23e-103 333
Msa1417280 AT1G27940.2 65.169 89 30 1 1 89 943 1030 4.93e-27 116
Msa1417280 AT1G27940.2 29.480 173 122 0 346 518 1 173 2.80e-17 85.9
Msa1417280 AT2G47000.4 36.278 532 314 10 1 518 537 1057 1.70e-102 332
Msa1417280 AT2G47000.4 25.562 356 257 6 165 517 48 398 2.44e-26 114
Msa1417280 AT2G47000.2 36.278 532 314 10 1 518 537 1057 3.65e-102 332
Msa1417280 AT2G47000.2 25.562 356 257 6 165 517 48 398 2.78e-26 114
Msa1417280 AT2G47000.6 36.278 532 314 10 1 518 537 1057 8.57e-102 333
Msa1417280 AT2G47000.6 25.000 360 254 7 165 517 48 398 2.54e-26 114
Msa1417280 AT2G47000.6 55.556 90 39 1 1 90 1196 1284 1.85e-24 108
Msa1417280 AT2G47000.5 36.278 532 314 10 1 518 537 1057 8.57e-102 333
Msa1417280 AT2G47000.5 25.000 360 254 7 165 517 48 398 2.54e-26 114
Msa1417280 AT2G47000.5 55.556 90 39 1 1 90 1196 1284 1.85e-24 108
Msa1417280 AT2G47000.1 36.278 532 314 10 1 518 537 1057 8.57e-102 333
Msa1417280 AT2G47000.1 25.000 360 254 7 165 517 48 398 2.54e-26 114
Msa1417280 AT2G47000.1 55.556 90 39 1 1 90 1196 1284 1.85e-24 108
Msa1417280 AT1G27940.1 43.343 353 199 1 166 518 668 1019 8.63e-102 332
Msa1417280 AT1G27940.1 26.301 346 252 2 175 518 43 387 4.88e-32 131
Msa1417280 AT1G27940.1 65.169 89 30 1 1 89 1157 1244 6.22e-27 116
Msa1417280 AT1G02530.1 34.972 529 326 8 1 518 521 1042 3.27e-100 328
Msa1417280 AT1G02530.1 24.854 342 242 5 187 517 45 382 1.74e-29 124
Msa1417280 AT1G02530.1 56.667 90 38 1 1 90 1183 1271 2.81e-24 107
Msa1417280 AT3G62150.3 34.791 526 321 8 1 518 556 1067 3.75e-98 323
Msa1417280 AT3G62150.3 24.425 348 258 5 172 517 73 417 1.20e-30 127
Msa1417280 AT3G62150.3 55.172 87 38 1 1 87 1206 1291 1.02e-23 106
Msa1417280 AT3G62150.2 34.791 526 321 8 1 518 556 1067 3.75e-98 323
Msa1417280 AT3G62150.2 24.425 348 258 5 172 517 73 417 1.20e-30 127
Msa1417280 AT3G62150.2 55.172 87 38 1 1 87 1206 1291 1.02e-23 106
Msa1417280 AT3G62150.1 34.791 526 321 8 1 518 556 1067 3.75e-98 323
Msa1417280 AT3G62150.1 24.425 348 258 5 172 517 73 417 1.20e-30 127
Msa1417280 AT3G62150.1 55.172 87 38 1 1 87 1206 1291 1.02e-23 106
Msa1417280 AT5G46540.1 35.946 523 318 7 1 518 510 1020 8.09e-97 319
Msa1417280 AT5G46540.1 23.529 340 256 4 180 518 36 372 3.09e-36 144
Msa1417280 AT5G46540.1 54.762 84 37 1 1 84 1159 1241 1.36e-20 96.7
Msa1417280 AT4G01820.1 34.170 518 322 7 1 518 501 999 1.52e-96 318
Msa1417280 AT4G01820.1 25.895 363 259 8 159 516 4 361 9.46e-31 127
Msa1417280 AT4G01820.1 58.621 87 35 1 1 87 1139 1224 8.50e-25 109
Msa1417280 AT4G01830.2 33.784 518 320 6 1 518 272 766 3.78e-91 300
Msa1417280 AT4G01830.2 57.292 96 36 2 1 96 906 996 2.46e-25 110
Msa1417280 AT4G01830.1 33.784 518 320 6 1 518 506 1000 1.02e-89 299
Msa1417280 AT4G01830.1 24.566 346 258 3 172 516 23 366 1.67e-33 136
Msa1417280 AT4G01830.1 57.292 96 36 2 1 96 1140 1230 2.72e-25 110
Msa1417280 AT2G39480.2 36.829 410 242 4 114 518 596 993 5.11e-89 297
Msa1417280 AT2G39480.2 40.000 165 78 5 1 161 384 531 1.55e-23 105
Msa1417280 AT2G39480.2 25.794 252 183 3 268 519 1 248 6.30e-22 100
Msa1417280 AT2G39480.2 47.674 86 42 2 1 85 1131 1214 5.38e-12 69.3
Msa1417280 AT3G55320.1 36.879 423 257 2 105 518 753 1174 6.98e-89 298
Msa1417280 AT3G55320.1 23.932 351 257 5 175 519 84 430 9.99e-29 121
Msa1417280 AT3G55320.1 37.158 183 83 6 1 154 566 745 1.28e-23 105
Msa1417280 AT3G55320.1 46.512 86 43 2 1 85 1312 1395 3.13e-11 67.0
Msa1417280 AT2G39480.1 36.829 410 242 4 114 518 776 1173 3.11e-88 296
Msa1417280 AT2G39480.1 24.148 352 255 6 175 519 82 428 2.97e-29 123
Msa1417280 AT2G39480.1 40.000 165 78 5 1 161 564 711 1.84e-23 105
Msa1417280 AT2G39480.1 47.674 86 42 2 1 85 1311 1394 5.71e-12 69.3
Msa1417280 AT4G18050.2 33.650 526 316 7 1 518 518 1018 8.79e-88 294
Msa1417280 AT4G18050.2 25.278 360 266 3 160 518 23 380 1.62e-34 139
Msa1417280 AT4G18050.2 54.945 91 40 1 1 91 1157 1246 6.93e-23 103
Msa1417280 AT4G18050.1 33.650 526 316 7 1 518 508 1008 1.16e-87 293
Msa1417280 AT4G18050.1 25.337 371 270 4 153 518 2 370 1.54e-34 139
Msa1417280 AT4G18050.1 54.945 91 40 1 1 91 1147 1236 7.48e-23 103
Msa1417280 AT2G47000.3 36.245 458 268 9 1 444 537 984 3.48e-86 286
Msa1417280 AT2G47000.3 25.562 356 257 6 165 517 48 398 2.68e-26 114
Msa1417280 AT2G47000.7 36.245 458 268 9 1 444 537 984 3.48e-86 286
Msa1417280 AT2G47000.7 25.562 356 257 6 165 517 48 398 2.68e-26 114
Msa1417280 AT1G02530.2 35.153 458 277 8 1 447 521 969 9.58e-81 271
Msa1417280 AT1G02530.2 24.854 342 242 5 187 517 45 382 1.37e-29 124
Msa1417280 AT4G01820.2 34.396 439 270 6 1 439 501 921 6.92e-79 266
Msa1417280 AT4G01820.2 25.895 363 259 8 159 516 4 361 7.74e-31 127
Msa1417280 AT5G39040.1 65.517 87 28 1 1 87 550 634 1.10e-26 114
Msa1417280 AT5G39040.1 24.648 284 206 4 235 516 132 409 1.72e-11 67.4
Msa1417280 AT4G25450.3 56.522 92 38 1 1 92 456 545 9.29e-23 102
Msa1417280 AT4G25450.1 56.522 92 38 1 1 92 625 714 1.29e-22 102
Msa1417280 AT1G70610.2 48.936 94 42 2 1 90 426 517 6.74e-16 80.9
Msa1417280 AT1G70610.1 48.936 94 42 2 1 90 607 698 6.98e-16 81.3
Msa1417280 AT5G58270.1 50.000 86 41 1 2 87 631 714 2.02e-15 79.7
Msa1417280 AT4G28620.1 48.837 86 42 1 2 87 591 674 4.91e-15 78.6
Msa1417280 AT4G28630.1 45.055 91 48 1 2 92 589 677 1.61e-13 73.6
Msa1417280 AT5G39040.2 24.648 284 206 4 235 516 132 409 1.18e-11 67.4

Find 102 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATTCCTAGCAATTAT+TGG 0.205923 tig0024468:-748 None:intergenic
CTCCACTACAAAGGTGCTTT+TGG 0.219200 tig0024468:+1707 Msa1417280:CDS
TCGGTCTTTGGTACGCTTCT+TGG 0.242607 tig0024468:+1794 Msa1417280:CDS
CTTCTTATGCACTCGGTCTT+TGG 0.246945 tig0024468:+1782 Msa1417280:CDS
ATACATTGCAACATTTCTTC+TGG 0.255313 tig0024468:+1115 Msa1417280:CDS
AAGATCAAGCCGGTTCCTTC+TGG 0.292489 tig0024468:+881 Msa1417280:CDS
CCCAGCTAGTTGTGTGGCCT+TGG 0.296196 tig0024468:-1602 None:intergenic
AAGAATTCCTAGCAATTATT+GGG 0.296244 tig0024468:-747 None:intergenic
ATTGCTAGGAATTCTTCTTA+TGG 0.305971 tig0024468:+754 Msa1417280:CDS
CAGATTTCCGGAAGTGGATA+TGG 0.313984 tig0024468:+1736 Msa1417280:CDS
AGTAAAGCATAGAGCCATTC+AGG 0.320845 tig0024468:-925 None:intergenic
CCTTGGCATGAGCAGCTTCT+AGG 0.339552 tig0024468:-1585 None:intergenic
GTCACGAAAACCGGCATATC+TGG 0.340996 tig0024468:-2075 None:intergenic
CGGATCATGTGTTTGTGGTC+TGG 0.341954 tig0024468:-1033 None:intergenic
ACCGAGTTTCTTGCACTTGA+AGG 0.362671 tig0024468:-718 None:intergenic
GAATGGCTCTATGCTTTACT+TGG 0.370633 tig0024468:+928 Msa1417280:CDS
AGCAGTACTTATCTATTTCT+CGG 0.391867 tig0024468:-1053 None:intergenic
TACATTGCAACATTTCTTCT+GGG 0.404846 tig0024468:+1116 Msa1417280:CDS
ATGTTCATGACTGGTTTCTC+TGG 0.404963 tig0024468:+1559 Msa1417280:CDS
CTACCTCCCTTGATGAAATC+AGG 0.405171 tig0024468:-1916 None:intergenic
GGAGTAGCATCTTGATCATC+TGG 0.408405 tig0024468:-1988 None:intergenic
ATGCTTGTTGCTTGTACTGC+AGG 0.409562 tig0024468:+1333 Msa1417280:CDS
ATTTCTTCTGGGATATTGTC+GGG 0.412021 tig0024468:+1127 Msa1417280:CDS
AGCTATTCCATATCCACTTC+CGG 0.416342 tig0024468:-1743 None:intergenic
AGCCATTGGAGACCGAATTT+CGG 0.428911 tig0024468:+1287 Msa1417280:CDS
TACTAGTCTCCAGAAGGAAC+CGG 0.430167 tig0024468:-890 None:intergenic
TATGCTTTACTTGGCTCAAT+CGG 0.430619 tig0024468:+937 Msa1417280:CDS
TCTGCACAATTACCGAAATT+CGG 0.430672 tig0024468:-1299 None:intergenic
TCATCTAGGAGAAGAATTGC+TGG 0.430733 tig0024468:-109 None:intergenic
CTTTATGCTTCTTATGCACT+CGG 0.430869 tig0024468:+1775 Msa1417280:CDS
TTTCTCGGATCATGTGTTTG+TGG 0.444348 tig0024468:-1038 None:intergenic
CCGCGAAGACGGTCAGGAAC+AGG 0.449483 tig0024468:-2009 None:intergenic
ACTTCACCGCGAAGACGGTC+AGG 0.451278 tig0024468:-2015 None:intergenic
GCCAAGGCCACACAACTAGC+TGG 0.454947 tig0024468:+1601 Msa1417280:CDS
CAATCTCGGTTTGACGGTCG+AGG 0.455780 tig0024468:-1963 None:intergenic
AAGTACTGCTACTTGTTGAT+TGG 0.457671 tig0024468:+1066 Msa1417280:CDS
ACAGTGGCTGCAACAACAAC+AGG 0.458475 tig0024468:-1402 None:intergenic
CATTTCTTCTGGGATATTGT+CGG 0.461400 tig0024468:+1126 Msa1417280:CDS
CGCTGCTGAGACTTTAACAT+TGG 0.461760 tig0024468:+1891 Msa1417280:CDS
CTGGTTCAATCTCGGTTTGA+CGG 0.463216 tig0024468:-1969 None:intergenic
TTGATCATCTGGTTCAATCT+CGG 0.469780 tig0024468:-1977 None:intergenic
TGAAATGGCATGGTTTGATC+AGG 0.476906 tig0024468:+1203 Msa1417280:CDS
CCTGTTCCTGACCGTCTTCG+CGG 0.477839 tig0024468:+2009 Msa1417280:CDS
AATGGCTGATCTGACATTGT+TGG 0.481285 tig0024468:-1271 None:intergenic
TAGTGGAGTTTCAAGGTTGG+AGG 0.484244 tig0024468:-1692 None:intergenic
CTCCTGCATCTTAATAAGCT+TGG 0.486978 tig0024468:-338 None:intergenic
TCAGACAATCTACGCGAATA+CGG 0.487608 tig0024468:-784 None:intergenic
ACCTTTGTAGTGGAGTTTCA+AGG 0.488495 tig0024468:-1699 None:intergenic
GTCCTCATGGTCTCTGCCAA+TGG 0.489711 tig0024468:+1868 Msa1417280:CDS
AAGGGACAGATTTCCGGAAG+TGG 0.498375 tig0024468:+1730 Msa1417280:CDS
GGAACCGGCTTGATCTTTGA+AGG 0.501131 tig0024468:-875 None:intergenic
GTACAGAAAATGTTCATGAC+TGG 0.504073 tig0024468:+1550 Msa1417280:intron
TAAAGTCTCAGCAGCGCCAT+TGG 0.507951 tig0024468:-1884 None:intergenic
TTTCAAGGTTGGAGGCGAAA+AGG 0.508537 tig0024468:-1684 None:intergenic
CTTGCTGAATCACGGCTACA+AGG 0.508539 tig0024468:-252 None:intergenic
GGCAGTGCTTAAGAATGAAA+TGG 0.508854 tig0024468:+1188 Msa1417280:CDS
TTGTCCTGCCAATCATGAAC+CGG 0.510965 tig0024468:-186 None:intergenic
CTAGGAATTCTTCTTATGGC+CGG 0.521239 tig0024468:+758 Msa1417280:CDS
ATGCACTTGTTGCCTCATCT+AGG 0.526072 tig0024468:-123 None:intergenic
CAGCTTTGCGAATTGTGGAC+AGG 0.526136 tig0024468:-228 None:intergenic
TTCCAAAAGCACCTTTGTAG+TGG 0.534331 tig0024468:-1709 None:intergenic
CCAAGGCCACACAACTAGCT+GGG 0.535348 tig0024468:+1602 Msa1417280:CDS
ATCTACGCGAATACGGTGAC+CGG 0.544334 tig0024468:-777 None:intergenic
AACCGGCATATCTGGTCTAG+TGG 0.548069 tig0024468:-2067 None:intergenic
AACACTTCCTTGCTGAATCA+CGG 0.550760 tig0024468:-260 None:intergenic
ATTGGCTCCTGATTTCATCA+AGG 0.550974 tig0024468:+1909 Msa1417280:CDS
AAGGTCAGCTTTGCGAATTG+TGG 0.551310 tig0024468:-233 None:intergenic
TCAATCGGTTCAATTGTTTG+TGG 0.551900 tig0024468:+952 Msa1417280:CDS
GAGATCAAAGACTGATCTCA+TGG 0.557507 tig0024468:-1941 None:intergenic
TTGGCTCCTGATTTCATCAA+GGG 0.560687 tig0024468:+1910 Msa1417280:CDS
GCCTTCAAGTGCAAGAAACT+CGG 0.563335 tig0024468:+717 Msa1417280:CDS
TGCTTAAGAATGAAATGGCA+TGG 0.567174 tig0024468:+1193 Msa1417280:CDS
CCATGAGGACCATGAAAACT+CGG 0.568995 tig0024468:-1855 None:intergenic
TACCGAAATTCGGTCTCCAA+TGG 0.580566 tig0024468:-1289 None:intergenic
AACAATGTCAGATCAGCCAT+TGG 0.580758 tig0024468:+1273 Msa1417280:CDS
TTAGCTCCCCAATAATTGCT+AGG 0.583188 tig0024468:+740 Msa1417280:CDS
GTTCAACTTCACCGCGAAGA+CGG 0.583316 tig0024468:-2020 None:intergenic
GGCTGCAACAGTTCTTACAT+TGG 0.583625 tig0024468:-1635 None:intergenic
TCCCACTAGACCAGATATGC+CGG 0.585198 tig0024468:+2065 Msa1417280:CDS
ACCGGCATATCTGGTCTAGT+GGG 0.585418 tig0024468:-2066 None:intergenic
TTGTAGTGGAGTTTCAAGGT+TGG 0.595028 tig0024468:-1695 None:intergenic
TGAAGTTGAACTTAAGCATG+TGG 0.597667 tig0024468:+2032 Msa1417280:CDS
CCTAGAAGCTGCTCATGCCA+AGG 0.602266 tig0024468:+1585 Msa1417280:CDS
GCTTCTTGGCTAGTGAAACA+TGG 0.608641 tig0024468:+1808 Msa1417280:CDS
AATGGCATGGTTTGATCAGG+AGG 0.608897 tig0024468:+1206 Msa1417280:CDS
GGCCACACAACTAGCTGGGG+AGG 0.609270 tig0024468:+1606 Msa1417280:CDS
TTTCTTCTGGGATATTGTCG+GGG 0.609370 tig0024468:+1128 Msa1417280:CDS
CGCCATTGGCAGAGACCATG+AGG 0.610788 tig0024468:-1870 None:intergenic
CTTGCCTTCAAAGATCAAGC+CGG 0.614462 tig0024468:+871 Msa1417280:CDS
AGAATTCCTAGCAATTATTG+GGG 0.620185 tig0024468:-746 None:intergenic
CTGCAGGCTTTGTGTTGCAG+TGG 0.625750 tig0024468:+1349 Msa1417280:CDS
AGCCTCCCCAGCTAGTTGTG+TGG 0.634445 tig0024468:-1608 None:intergenic
AAAATCTTACGAAACGTGTG+AGG 0.635295 tig0024468:+1151 Msa1417280:CDS
GCTCCTGATTTCATCAAGGG+AGG 0.637925 tig0024468:+1913 Msa1417280:CDS
ACCTTGAAACTCCACTACAA+AGG 0.639466 tig0024468:+1698 Msa1417280:CDS
CAAGGCCACACAACTAGCTG+GGG 0.666253 tig0024468:+1603 Msa1417280:CDS
TGTGAGGGAGAAAATGCTGA+CGG 0.679884 tig0024468:+1167 Msa1417280:CDS
AGAGTGCTAGAATTTCTGCA+AGG 0.683229 tig0024468:+1235 Msa1417280:CDS
AAAACAAACCTGCAAAACAG+TGG 0.685454 tig0024468:-1418 None:intergenic
AAATCTTACGAAACGTGTGA+GGG 0.686920 tig0024468:+1152 Msa1417280:CDS
CAACAGGAAATACAGCAATG+AGG 0.716579 tig0024468:-1386 None:intergenic
CTGGATTGTAGTAGACACTG+AGG 0.761606 tig0024468:-1014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTCATAGCATTTTCAT+GGG - tig0024468:368-387 None:intergenic 20.0%
!!! ATTATTCATAGCATTTTCAT+GGG - tig0024468:368-387 None:intergenic 20.0%
!! CATTATTCATAGCATTTTCA+TGG - tig0024468:369-388 None:intergenic 25.0%
! AAAATGCTATGAATAATGCT+AGG + tig0024468:371-390 Msa1417280:CDS 25.0%
! AGGTAAATAAAGTGTAACTA+AGG - tig0024468:538-557 None:intergenic 25.0%
! ATAAGATGAACTTGAAACAT+TGG - tig0024468:643-662 None:intergenic 25.0%
!! TACATGACATTTTTATATGC+AGG + tig0024468:695-714 Msa1417280:intron 25.0%
! AAGAATTCCTAGCAATTATT+GGG - tig0024468:750-769 None:intergenic 25.0%
! TGTACAAAACACAAAACAAT+TGG - tig0024468:1535-1554 None:intergenic 25.0%
!! AATTTTCGATTCTGAATTGA+AGG - tig0024468:1659-1678 None:intergenic 25.0%
!! CATTATTCATAGCATTTTCA+TGG - tig0024468:369-388 None:intergenic 25.0%
! AAAATGCTATGAATAATGCT+AGG + tig0024468:371-390 Msa1417280:CDS 25.0%
! AGGTAAATAAAGTGTAACTA+AGG - tig0024468:538-557 None:intergenic 25.0%
! ATAAGATGAACTTGAAACAT+TGG - tig0024468:643-662 None:intergenic 25.0%
!! TACATGACATTTTTATATGC+AGG + tig0024468:695-714 Msa1417280:intron 25.0%
! AAGAATTCCTAGCAATTATT+GGG - tig0024468:750-769 None:intergenic 25.0%
! TGTACAAAACACAAAACAAT+TGG - tig0024468:1535-1554 None:intergenic 25.0%
!! AATTTTCGATTCTGAATTGA+AGG - tig0024468:1659-1678 None:intergenic 25.0%
AACAAAGAATAGCAATAGCA+AGG + tig0024468:71-90 Msa1417280:five_prime_UTR 30.0%
ACAAAGAATAGCAATAGCAA+GGG + tig0024468:72-91 Msa1417280:five_prime_UTR 30.0%
!!! CAAGGAAGTGTTTTTGAAAT+TGG + tig0024468:271-290 Msa1417280:CDS 30.0%
AGAATTCCTAGCAATTATTG+GGG - tig0024468:749-768 None:intergenic 30.0%
GAAGAATTCCTAGCAATTAT+TGG - tig0024468:751-770 None:intergenic 30.0%
ATTGCTAGGAATTCTTCTTA+TGG + tig0024468:754-773 Msa1417280:CDS 30.0%
! AGCTTTTCATGCTTGTAATT+TGG - tig0024468:853-872 None:intergenic 30.0%
TAAAAATGAACTCTCCTGAA+TGG + tig0024468:911-930 Msa1417280:CDS 30.0%
! AGCAGTACTTATCTATTTCT+CGG - tig0024468:1056-1075 None:intergenic 30.0%
ATACATTGCAACATTTCTTC+TGG + tig0024468:1115-1134 Msa1417280:CDS 30.0%
TACATTGCAACATTTCTTCT+GGG + tig0024468:1116-1135 Msa1417280:CDS 30.0%
!! TTGTTTTACCATCTTCTTTC+AGG + tig0024468:1434-1453 Msa1417280:intron 30.0%
TATTCAACTCTGTTTCACTT+AGG + tig0024468:1466-1485 Msa1417280:intron 30.0%
ATTCAACTCTGTTTCACTTA+GGG + tig0024468:1467-1486 Msa1417280:intron 30.0%
TCAAATAAACCAATCCAAAC+AGG - tig0024468:1493-1512 None:intergenic 30.0%
! TAAAACAATCCGAGTTTTCA+TGG + tig0024468:1846-1865 Msa1417280:CDS 30.0%
AACAAAGAATAGCAATAGCA+AGG + tig0024468:71-90 Msa1417280:five_prime_UTR 30.0%
ACAAAGAATAGCAATAGCAA+GGG + tig0024468:72-91 Msa1417280:five_prime_UTR 30.0%
!!! CAAGGAAGTGTTTTTGAAAT+TGG + tig0024468:271-290 Msa1417280:CDS 30.0%
AGAATTCCTAGCAATTATTG+GGG - tig0024468:749-768 None:intergenic 30.0%
GAAGAATTCCTAGCAATTAT+TGG - tig0024468:751-770 None:intergenic 30.0%
ATTGCTAGGAATTCTTCTTA+TGG + tig0024468:754-773 Msa1417280:CDS 30.0%
! AGCTTTTCATGCTTGTAATT+TGG - tig0024468:853-872 None:intergenic 30.0%
TAAAAATGAACTCTCCTGAA+TGG + tig0024468:911-930 Msa1417280:CDS 30.0%
! AGCAGTACTTATCTATTTCT+CGG - tig0024468:1056-1075 None:intergenic 30.0%
ATACATTGCAACATTTCTTC+TGG + tig0024468:1115-1134 Msa1417280:CDS 30.0%
TACATTGCAACATTTCTTCT+GGG + tig0024468:1116-1135 Msa1417280:CDS 30.0%
!! TTGTTTTACCATCTTCTTTC+AGG + tig0024468:1434-1453 Msa1417280:intron 30.0%
TATTCAACTCTGTTTCACTT+AGG + tig0024468:1466-1485 Msa1417280:intron 30.0%
ATTCAACTCTGTTTCACTTA+GGG + tig0024468:1467-1486 Msa1417280:intron 30.0%
TCAAATAAACCAATCCAAAC+AGG - tig0024468:1493-1512 None:intergenic 30.0%
! TAAAACAATCCGAGTTTTCA+TGG + tig0024468:1846-1865 Msa1417280:CDS 30.0%
! GTTACACTTTATTTACCTCC+CGG + tig0024468:540-559 Msa1417280:intron 35.0%
!!! TTTTTTTGGTATTGACCCTC+CGG - tig0024468:604-623 None:intergenic 35.0%
AATGTCATGTATGTTCAGCT+CGG - tig0024468:686-705 None:intergenic 35.0%
!! CATTTTTACTAGTCTCCAGA+AGG - tig0024468:899-918 None:intergenic 35.0%
TATGCTTTACTTGGCTCAAT+CGG + tig0024468:937-956 Msa1417280:CDS 35.0%
! TCAATCGGTTCAATTGTTTG+TGG + tig0024468:952-971 Msa1417280:CDS 35.0%
! AAGTACTGCTACTTGTTGAT+TGG + tig0024468:1066-1085 Msa1417280:CDS 35.0%
!! CATTTCTTCTGGGATATTGT+CGG + tig0024468:1126-1145 Msa1417280:CDS 35.0%
!! ATTTCTTCTGGGATATTGTC+GGG + tig0024468:1127-1146 Msa1417280:CDS 35.0%
AAAATCTTACGAAACGTGTG+AGG + tig0024468:1151-1170 Msa1417280:CDS 35.0%
AAATCTTACGAAACGTGTGA+GGG + tig0024468:1152-1171 Msa1417280:CDS 35.0%
TGCTTAAGAATGAAATGGCA+TGG + tig0024468:1193-1212 Msa1417280:CDS 35.0%
TCTGCACAATTACCGAAATT+CGG - tig0024468:1302-1321 None:intergenic 35.0%
AAAACAAACCTGCAAAACAG+TGG - tig0024468:1421-1440 None:intergenic 35.0%
GTACAGAAAATGTTCATGAC+TGG + tig0024468:1550-1569 Msa1417280:intron 35.0%
CTTTATGCTTCTTATGCACT+CGG + tig0024468:1775-1794 Msa1417280:CDS 35.0%
! TTGATCATCTGGTTCAATCT+CGG - tig0024468:1980-1999 None:intergenic 35.0%
TGAAGTTGAACTTAAGCATG+TGG + tig0024468:2032-2051 Msa1417280:CDS 35.0%
CCACCTGCCATTAAAAAAAA+CGG - tig0024468:18-37 None:intergenic 35.0%
! GTTACACTTTATTTACCTCC+CGG + tig0024468:540-559 Msa1417280:intron 35.0%
!!! TTTTTTTGGTATTGACCCTC+CGG - tig0024468:604-623 None:intergenic 35.0%
AATGTCATGTATGTTCAGCT+CGG - tig0024468:686-705 None:intergenic 35.0%
!! CATTTTTACTAGTCTCCAGA+AGG - tig0024468:899-918 None:intergenic 35.0%
TATGCTTTACTTGGCTCAAT+CGG + tig0024468:937-956 Msa1417280:CDS 35.0%
! TCAATCGGTTCAATTGTTTG+TGG + tig0024468:952-971 Msa1417280:CDS 35.0%
! AAGTACTGCTACTTGTTGAT+TGG + tig0024468:1066-1085 Msa1417280:CDS 35.0%
!! CATTTCTTCTGGGATATTGT+CGG + tig0024468:1126-1145 Msa1417280:CDS 35.0%
!! ATTTCTTCTGGGATATTGTC+GGG + tig0024468:1127-1146 Msa1417280:CDS 35.0%
AAAATCTTACGAAACGTGTG+AGG + tig0024468:1151-1170 Msa1417280:CDS 35.0%
AAATCTTACGAAACGTGTGA+GGG + tig0024468:1152-1171 Msa1417280:CDS 35.0%
TGCTTAAGAATGAAATGGCA+TGG + tig0024468:1193-1212 Msa1417280:CDS 35.0%
TCTGCACAATTACCGAAATT+CGG - tig0024468:1302-1321 None:intergenic 35.0%
AAAACAAACCTGCAAAACAG+TGG - tig0024468:1421-1440 None:intergenic 35.0%
GTACAGAAAATGTTCATGAC+TGG + tig0024468:1550-1569 Msa1417280:intron 35.0%
CTTTATGCTTCTTATGCACT+CGG + tig0024468:1775-1794 Msa1417280:CDS 35.0%
! TTGATCATCTGGTTCAATCT+CGG - tig0024468:1980-1999 None:intergenic 35.0%
TGAAGTTGAACTTAAGCATG+TGG + tig0024468:2032-2051 Msa1417280:CDS 35.0%
GAAAGAGGACTACAACTTTC+TGG + tig0024468:40-59 Msa1417280:five_prime_UTR 40.0%
TCATCTAGGAGAAGAATTGC+TGG - tig0024468:112-131 None:intergenic 40.0%
AGCAATTCTTCTCCTAGATG+AGG + tig0024468:111-130 Msa1417280:CDS 40.0%
AACACTTCCTTGCTGAATCA+CGG - tig0024468:263-282 None:intergenic 40.0%
CTCTTCTCCAAAGGTGAAAA+TGG + tig0024468:307-326 Msa1417280:CDS 40.0%
! GTAGACTCCATTTTCACCTT+TGG - tig0024468:317-336 None:intergenic 40.0%
CTCCTGCATCTTAATAAGCT+TGG - tig0024468:341-360 None:intergenic 40.0%
CAAGCTTATTAAGATGCAGG+AGG + tig0024468:339-358 Msa1417280:CDS 40.0%
GTTCATGAAAGAGTAGTGCT+TGG + tig0024468:461-480 Msa1417280:intron 40.0%
AACTTGGGTGGAATAATCCT+TGG - tig0024468:487-506 None:intergenic 40.0%
! TGAAAATTTGGAGTTCAGCC+GGG - tig0024468:561-580 None:intergenic 40.0%
! CTGAAAATTTGGAGTTCAGC+CGG - tig0024468:562-581 None:intergenic 40.0%
TTAGCTCCCCAATAATTGCT+AGG + tig0024468:740-759 Msa1417280:CDS 40.0%
CTAGGAATTCTTCTTATGGC+CGG + tig0024468:758-777 Msa1417280:CDS 40.0%
TCAGACAATCTACGCGAATA+CGG - tig0024468:787-806 None:intergenic 40.0%
AGTAAAGCATAGAGCCATTC+AGG - tig0024468:928-947 None:intergenic 40.0%
! GAATGGCTCTATGCTTTACT+TGG + tig0024468:928-947 Msa1417280:CDS 40.0%
TTTCTCGGATCATGTGTTTG+TGG - tig0024468:1041-1060 None:intergenic 40.0%
!! TTTCTTCTGGGATATTGTCG+GGG + tig0024468:1128-1147 Msa1417280:CDS 40.0%
GGCAGTGCTTAAGAATGAAA+TGG + tig0024468:1188-1207 Msa1417280:CDS 40.0%
TGAAATGGCATGGTTTGATC+AGG + tig0024468:1203-1222 Msa1417280:CDS 40.0%
! AGAGTGCTAGAATTTCTGCA+AGG + tig0024468:1235-1254 Msa1417280:CDS 40.0%
AATGGCTGATCTGACATTGT+TGG - tig0024468:1274-1293 None:intergenic 40.0%
AACAATGTCAGATCAGCCAT+TGG + tig0024468:1273-1292 Msa1417280:CDS 40.0%
CAACAGGAAATACAGCAATG+AGG - tig0024468:1389-1408 None:intergenic 40.0%
AAAGTGTGCCTGAAAGAAGA+TGG - tig0024468:1445-1464 None:intergenic 40.0%
!! ATGTTCATGACTGGTTTCTC+TGG + tig0024468:1559-1578 Msa1417280:CDS 40.0%
! TTGTAGTGGAGTTTCAAGGT+TGG - tig0024468:1698-1717 None:intergenic 40.0%
ACCTTGAAACTCCACTACAA+AGG + tig0024468:1698-1717 Msa1417280:CDS 40.0%
! ACCTTTGTAGTGGAGTTTCA+AGG - tig0024468:1702-1721 None:intergenic 40.0%
!! TTCCAAAAGCACCTTTGTAG+TGG - tig0024468:1712-1731 None:intergenic 40.0%
!!! ACTACAAAGGTGCTTTTGGA+AGG + tig0024468:1711-1730 Msa1417280:CDS 40.0%
!!! CTACAAAGGTGCTTTTGGAA+GGG + tig0024468:1712-1731 Msa1417280:CDS 40.0%
!! TTTTGGAAGGGACAGATTTC+CGG + tig0024468:1724-1743 Msa1417280:CDS 40.0%
AGCTATTCCATATCCACTTC+CGG - tig0024468:1746-1765 None:intergenic 40.0%
! ATTGGCTCCTGATTTCATCA+AGG + tig0024468:1909-1928 Msa1417280:CDS 40.0%
TTGGCTCCTGATTTCATCAA+GGG + tig0024468:1910-1929 Msa1417280:CDS 40.0%
GAGATCAAAGACTGATCTCA+TGG - tig0024468:1944-1963 None:intergenic 40.0%
GAAAGAGGACTACAACTTTC+TGG + tig0024468:40-59 Msa1417280:five_prime_UTR 40.0%
TCATCTAGGAGAAGAATTGC+TGG - tig0024468:112-131 None:intergenic 40.0%
AGCAATTCTTCTCCTAGATG+AGG + tig0024468:111-130 Msa1417280:CDS 40.0%
AACACTTCCTTGCTGAATCA+CGG - tig0024468:263-282 None:intergenic 40.0%
CTCTTCTCCAAAGGTGAAAA+TGG + tig0024468:307-326 Msa1417280:CDS 40.0%
! GTAGACTCCATTTTCACCTT+TGG - tig0024468:317-336 None:intergenic 40.0%
CTCCTGCATCTTAATAAGCT+TGG - tig0024468:341-360 None:intergenic 40.0%
CAAGCTTATTAAGATGCAGG+AGG + tig0024468:339-358 Msa1417280:CDS 40.0%
GTTCATGAAAGAGTAGTGCT+TGG + tig0024468:461-480 Msa1417280:intron 40.0%
AACTTGGGTGGAATAATCCT+TGG - tig0024468:487-506 None:intergenic 40.0%
! TGAAAATTTGGAGTTCAGCC+GGG - tig0024468:561-580 None:intergenic 40.0%
! CTGAAAATTTGGAGTTCAGC+CGG - tig0024468:562-581 None:intergenic 40.0%
TTAGCTCCCCAATAATTGCT+AGG + tig0024468:740-759 Msa1417280:CDS 40.0%
CTAGGAATTCTTCTTATGGC+CGG + tig0024468:758-777 Msa1417280:CDS 40.0%
TCAGACAATCTACGCGAATA+CGG - tig0024468:787-806 None:intergenic 40.0%
AGTAAAGCATAGAGCCATTC+AGG - tig0024468:928-947 None:intergenic 40.0%
! GAATGGCTCTATGCTTTACT+TGG + tig0024468:928-947 Msa1417280:CDS 40.0%
TTTCTCGGATCATGTGTTTG+TGG - tig0024468:1041-1060 None:intergenic 40.0%
!! TTTCTTCTGGGATATTGTCG+GGG + tig0024468:1128-1147 Msa1417280:CDS 40.0%
GGCAGTGCTTAAGAATGAAA+TGG + tig0024468:1188-1207 Msa1417280:CDS 40.0%
TGAAATGGCATGGTTTGATC+AGG + tig0024468:1203-1222 Msa1417280:CDS 40.0%
! AGAGTGCTAGAATTTCTGCA+AGG + tig0024468:1235-1254 Msa1417280:CDS 40.0%
AATGGCTGATCTGACATTGT+TGG - tig0024468:1274-1293 None:intergenic 40.0%
AACAATGTCAGATCAGCCAT+TGG + tig0024468:1273-1292 Msa1417280:CDS 40.0%
CAACAGGAAATACAGCAATG+AGG - tig0024468:1389-1408 None:intergenic 40.0%
AAAGTGTGCCTGAAAGAAGA+TGG - tig0024468:1445-1464 None:intergenic 40.0%
!! ATGTTCATGACTGGTTTCTC+TGG + tig0024468:1559-1578 Msa1417280:CDS 40.0%
! TTGTAGTGGAGTTTCAAGGT+TGG - tig0024468:1698-1717 None:intergenic 40.0%
ACCTTGAAACTCCACTACAA+AGG + tig0024468:1698-1717 Msa1417280:CDS 40.0%
! ACCTTTGTAGTGGAGTTTCA+AGG - tig0024468:1702-1721 None:intergenic 40.0%
!! TTCCAAAAGCACCTTTGTAG+TGG - tig0024468:1712-1731 None:intergenic 40.0%
!!! ACTACAAAGGTGCTTTTGGA+AGG + tig0024468:1711-1730 Msa1417280:CDS 40.0%
!!! CTACAAAGGTGCTTTTGGAA+GGG + tig0024468:1712-1731 Msa1417280:CDS 40.0%
!! TTTTGGAAGGGACAGATTTC+CGG + tig0024468:1724-1743 Msa1417280:CDS 40.0%
AGCTATTCCATATCCACTTC+CGG - tig0024468:1746-1765 None:intergenic 40.0%
! ATTGGCTCCTGATTTCATCA+AGG + tig0024468:1909-1928 Msa1417280:CDS 40.0%
TTGGCTCCTGATTTCATCAA+GGG + tig0024468:1910-1929 Msa1417280:CDS 40.0%
GAGATCAAAGACTGATCTCA+TGG - tig0024468:1944-1963 None:intergenic 40.0%
AGAGGACTACAACTTTCTGG+AGG + tig0024468:43-62 Msa1417280:five_prime_UTR 45.0%
GAGGACTACAACTTTCTGGA+GGG + tig0024468:44-63 Msa1417280:five_prime_UTR 45.0%
! ATGCACTTGTTGCCTCATCT+AGG - tig0024468:126-145 None:intergenic 45.0%
AGATGAGGCAACAAGTGCAT+TGG + tig0024468:126-145 Msa1417280:CDS 45.0%
!! TAGTGCAAGAAGCACTTGAC+CGG + tig0024468:167-186 Msa1417280:CDS 45.0%
TTGTCCTGCCAATCATGAAC+CGG - tig0024468:189-208 None:intergenic 45.0%
AAGGTCAGCTTTGCGAATTG+TGG - tig0024468:236-255 None:intergenic 45.0%
CATGATGAGCTCTTCTCCAA+AGG + tig0024468:298-317 Msa1417280:CDS 45.0%
CGCCAAGCTTATTAAGATGC+AGG + tig0024468:336-355 Msa1417280:CDS 45.0%
ATGCTAGGAAGAGTAGTGCA+AGG + tig0024468:386-405 Msa1417280:CDS 45.0%
TTCGAATCCTAGCGCGAAAT+CGG + tig0024468:505-524 Msa1417280:intron 45.0%
ATTATTCCCGATTTCGCGCT+AGG - tig0024468:515-534 None:intergenic 45.0%
! CGGCTGAACTCCAAATTTTC+AGG + tig0024468:560-579 Msa1417280:intron 45.0%
GGAAAGCGGTCCTGAAAATT+TGG - tig0024468:573-592 None:intergenic 45.0%
GCCTTCAAGTGCAAGAAACT+CGG + tig0024468:717-736 Msa1417280:CDS 45.0%
ACCGAGTTTCTTGCACTTGA+AGG - tig0024468:721-740 None:intergenic 45.0%
CTTGCCTTCAAAGATCAAGC+CGG + tig0024468:871-890 Msa1417280:CDS 45.0%
! TACTAGTCTCCAGAAGGAAC+CGG - tig0024468:893-912 None:intergenic 45.0%
CTGGATTGTAGTAGACACTG+AGG - tig0024468:1017-1036 None:intergenic 45.0%
TGTGAGGGAGAAAATGCTGA+CGG + tig0024468:1167-1186 Msa1417280:CDS 45.0%
AATGGCATGGTTTGATCAGG+AGG + tig0024468:1206-1225 Msa1417280:CDS 45.0%
AGCCATTGGAGACCGAATTT+CGG + tig0024468:1287-1306 Msa1417280:CDS 45.0%
TACCGAAATTCGGTCTCCAA+TGG - tig0024468:1292-1311 None:intergenic 45.0%
! ATGCTTGTTGCTTGTACTGC+AGG + tig0024468:1333-1352 Msa1417280:CDS 45.0%
TGTTTCACTTAGGGCCTGTT+TGG + tig0024468:1476-1495 Msa1417280:intron 45.0%
GGCTGCAACAGTTCTTACAT+TGG - tig0024468:1638-1657 None:intergenic 45.0%
TTTCAAGGTTGGAGGCGAAA+AGG - tig0024468:1687-1706 None:intergenic 45.0%
TAGTGGAGTTTCAAGGTTGG+AGG - tig0024468:1695-1714 None:intergenic 45.0%
!!! CTCCACTACAAAGGTGCTTT+TGG + tig0024468:1707-1726 Msa1417280:CDS 45.0%
CAGATTTCCGGAAGTGGATA+TGG + tig0024468:1736-1755 Msa1417280:CDS 45.0%
CTTCTTATGCACTCGGTCTT+TGG + tig0024468:1782-1801 Msa1417280:CDS 45.0%
GCTTCTTGGCTAGTGAAACA+TGG + tig0024468:1808-1827 Msa1417280:CDS 45.0%
CCATGAGGACCATGAAAACT+CGG - tig0024468:1858-1877 None:intergenic 45.0%
CGCTGCTGAGACTTTAACAT+TGG + tig0024468:1891-1910 Msa1417280:CDS 45.0%
CTACCTCCCTTGATGAAATC+AGG - tig0024468:1919-1938 None:intergenic 45.0%
! CTGGTTCAATCTCGGTTTGA+CGG - tig0024468:1972-1991 None:intergenic 45.0%
GGAGTAGCATCTTGATCATC+TGG - tig0024468:1991-2010 None:intergenic 45.0%
AGAGGACTACAACTTTCTGG+AGG + tig0024468:43-62 Msa1417280:five_prime_UTR 45.0%
GAGGACTACAACTTTCTGGA+GGG + tig0024468:44-63 Msa1417280:five_prime_UTR 45.0%
! ATGCACTTGTTGCCTCATCT+AGG - tig0024468:126-145 None:intergenic 45.0%
AGATGAGGCAACAAGTGCAT+TGG + tig0024468:126-145 Msa1417280:CDS 45.0%
!! TAGTGCAAGAAGCACTTGAC+CGG + tig0024468:167-186 Msa1417280:CDS 45.0%
TTGTCCTGCCAATCATGAAC+CGG - tig0024468:189-208 None:intergenic 45.0%
AAGGTCAGCTTTGCGAATTG+TGG - tig0024468:236-255 None:intergenic 45.0%
CATGATGAGCTCTTCTCCAA+AGG + tig0024468:298-317 Msa1417280:CDS 45.0%
CGCCAAGCTTATTAAGATGC+AGG + tig0024468:336-355 Msa1417280:CDS 45.0%
ATGCTAGGAAGAGTAGTGCA+AGG + tig0024468:386-405 Msa1417280:CDS 45.0%
TTCGAATCCTAGCGCGAAAT+CGG + tig0024468:505-524 Msa1417280:intron 45.0%
ATTATTCCCGATTTCGCGCT+AGG - tig0024468:515-534 None:intergenic 45.0%
! CGGCTGAACTCCAAATTTTC+AGG + tig0024468:560-579 Msa1417280:intron 45.0%
GGAAAGCGGTCCTGAAAATT+TGG - tig0024468:573-592 None:intergenic 45.0%
GCCTTCAAGTGCAAGAAACT+CGG + tig0024468:717-736 Msa1417280:CDS 45.0%
ACCGAGTTTCTTGCACTTGA+AGG - tig0024468:721-740 None:intergenic 45.0%
CTTGCCTTCAAAGATCAAGC+CGG + tig0024468:871-890 Msa1417280:CDS 45.0%
! TACTAGTCTCCAGAAGGAAC+CGG - tig0024468:893-912 None:intergenic 45.0%
CTGGATTGTAGTAGACACTG+AGG - tig0024468:1017-1036 None:intergenic 45.0%
TGTGAGGGAGAAAATGCTGA+CGG + tig0024468:1167-1186 Msa1417280:CDS 45.0%
AATGGCATGGTTTGATCAGG+AGG + tig0024468:1206-1225 Msa1417280:CDS 45.0%
AGCCATTGGAGACCGAATTT+CGG + tig0024468:1287-1306 Msa1417280:CDS 45.0%
TACCGAAATTCGGTCTCCAA+TGG - tig0024468:1292-1311 None:intergenic 45.0%
! ATGCTTGTTGCTTGTACTGC+AGG + tig0024468:1333-1352 Msa1417280:CDS 45.0%
TGTTTCACTTAGGGCCTGTT+TGG + tig0024468:1476-1495 Msa1417280:intron 45.0%
GGCTGCAACAGTTCTTACAT+TGG - tig0024468:1638-1657 None:intergenic 45.0%
TTTCAAGGTTGGAGGCGAAA+AGG - tig0024468:1687-1706 None:intergenic 45.0%
TAGTGGAGTTTCAAGGTTGG+AGG - tig0024468:1695-1714 None:intergenic 45.0%
!!! CTCCACTACAAAGGTGCTTT+TGG + tig0024468:1707-1726 Msa1417280:CDS 45.0%
CAGATTTCCGGAAGTGGATA+TGG + tig0024468:1736-1755 Msa1417280:CDS 45.0%
CTTCTTATGCACTCGGTCTT+TGG + tig0024468:1782-1801 Msa1417280:CDS 45.0%
GCTTCTTGGCTAGTGAAACA+TGG + tig0024468:1808-1827 Msa1417280:CDS 45.0%
CCATGAGGACCATGAAAACT+CGG - tig0024468:1858-1877 None:intergenic 45.0%
CGCTGCTGAGACTTTAACAT+TGG + tig0024468:1891-1910 Msa1417280:CDS 45.0%
CTACCTCCCTTGATGAAATC+AGG - tig0024468:1919-1938 None:intergenic 45.0%
! CTGGTTCAATCTCGGTTTGA+CGG - tig0024468:1972-1991 None:intergenic 45.0%
GGAGTAGCATCTTGATCATC+TGG - tig0024468:1991-2010 None:intergenic 45.0%
!!! AAAATAGTAATATTTTTTTT+TGG - tig0024468:618-637 None:intergenic 5.0%
!!! AAAATAGTAATATTTTTTTT+TGG - tig0024468:618-637 None:intergenic 5.0%
TAATGGCAGGTGGGAGAAAG+AGG + tig0024468:25-44 Msa1417280:five_prime_UTR 50.0%
! GCACTTGACCGGTTCATGAT+TGG + tig0024468:178-197 Msa1417280:CDS 50.0%
! TTGACCGGTTCATGATTGGC+AGG + tig0024468:182-201 Msa1417280:CDS 50.0%
CAGCTTTGCGAATTGTGGAC+AGG - tig0024468:231-250 None:intergenic 50.0%
CTTGCTGAATCACGGCTACA+AGG - tig0024468:255-274 None:intergenic 50.0%
CTTGTAGCCGTGATTCAGCA+AGG + tig0024468:253-272 Msa1417280:CDS 50.0%
GAAAGAGTAGTGCTTGGCCA+AGG + tig0024468:467-486 Msa1417280:intron 50.0%
TCGCGCTAGGATTCGAACTT+GGG - tig0024468:502-521 None:intergenic 50.0%
TTCGCGCTAGGATTCGAACT+TGG - tig0024468:503-522 None:intergenic 50.0%
TCGAATCCTAGCGCGAAATC+GGG + tig0024468:506-525 Msa1417280:intron 50.0%
! AAATTTGGAGTTCAGCCGGG+AGG - tig0024468:558-577 None:intergenic 50.0%
TTTCAGGACCGCTTTCCCTT+AGG + tig0024468:576-595 Msa1417280:intron 50.0%
ATTGACCCTCCGGTTCCTAA+GGG - tig0024468:594-613 None:intergenic 50.0%
TATTGACCCTCCGGTTCCTA+AGG - tig0024468:595-614 None:intergenic 50.0%
ATCTACGCGAATACGGTGAC+CGG - tig0024468:780-799 None:intergenic 50.0%
!! GGAACCGGCTTGATCTTTGA+AGG - tig0024468:878-897 None:intergenic 50.0%
! AAGATCAAGCCGGTTCCTTC+TGG + tig0024468:881-900 Msa1417280:CDS 50.0%
CGGATCATGTGTTTGTGGTC+TGG - tig0024468:1036-1055 None:intergenic 50.0%
ACAGTGGCTGCAACAACAAC+AGG - tig0024468:1405-1424 None:intergenic 50.0%
! TGTTGCAGCCACTGTTTTGC+AGG + tig0024468:1410-1429 Msa1417280:CDS 50.0%
CACTTAGGGCCTGTTTGGAT+TGG + tig0024468:1481-1500 Msa1417280:intron 50.0%
AAGGGACAGATTTCCGGAAG+TGG + tig0024468:1730-1749 Msa1417280:CDS 50.0%
TCGGTCTTTGGTACGCTTCT+TGG + tig0024468:1794-1813 Msa1417280:CDS 50.0%
! CCGAGTTTTCATGGTCCTCA+TGG + tig0024468:1855-1874 Msa1417280:CDS 50.0%
TAAAGTCTCAGCAGCGCCAT+TGG - tig0024468:1887-1906 None:intergenic 50.0%
GCTCCTGATTTCATCAAGGG+AGG + tig0024468:1913-1932 Msa1417280:CDS 50.0%
GTTCAACTTCACCGCGAAGA+CGG - tig0024468:2023-2042 None:intergenic 50.0%
TAATGGCAGGTGGGAGAAAG+AGG + tig0024468:25-44 Msa1417280:five_prime_UTR 50.0%
! GCACTTGACCGGTTCATGAT+TGG + tig0024468:178-197 Msa1417280:CDS 50.0%
! TTGACCGGTTCATGATTGGC+AGG + tig0024468:182-201 Msa1417280:CDS 50.0%
CAGCTTTGCGAATTGTGGAC+AGG - tig0024468:231-250 None:intergenic 50.0%
CTTGCTGAATCACGGCTACA+AGG - tig0024468:255-274 None:intergenic 50.0%
CTTGTAGCCGTGATTCAGCA+AGG + tig0024468:253-272 Msa1417280:CDS 50.0%
GAAAGAGTAGTGCTTGGCCA+AGG + tig0024468:467-486 Msa1417280:intron 50.0%
TCGCGCTAGGATTCGAACTT+GGG - tig0024468:502-521 None:intergenic 50.0%
TTCGCGCTAGGATTCGAACT+TGG - tig0024468:503-522 None:intergenic 50.0%
TCGAATCCTAGCGCGAAATC+GGG + tig0024468:506-525 Msa1417280:intron 50.0%
! AAATTTGGAGTTCAGCCGGG+AGG - tig0024468:558-577 None:intergenic 50.0%
TTTCAGGACCGCTTTCCCTT+AGG + tig0024468:576-595 Msa1417280:intron 50.0%
ATTGACCCTCCGGTTCCTAA+GGG - tig0024468:594-613 None:intergenic 50.0%
TATTGACCCTCCGGTTCCTA+AGG - tig0024468:595-614 None:intergenic 50.0%
ATCTACGCGAATACGGTGAC+CGG - tig0024468:780-799 None:intergenic 50.0%
!! GGAACCGGCTTGATCTTTGA+AGG - tig0024468:878-897 None:intergenic 50.0%
! AAGATCAAGCCGGTTCCTTC+TGG + tig0024468:881-900 Msa1417280:CDS 50.0%
CGGATCATGTGTTTGTGGTC+TGG - tig0024468:1036-1055 None:intergenic 50.0%
ACAGTGGCTGCAACAACAAC+AGG - tig0024468:1405-1424 None:intergenic 50.0%
! TGTTGCAGCCACTGTTTTGC+AGG + tig0024468:1410-1429 Msa1417280:CDS 50.0%
CACTTAGGGCCTGTTTGGAT+TGG + tig0024468:1481-1500 Msa1417280:intron 50.0%
AAGGGACAGATTTCCGGAAG+TGG + tig0024468:1730-1749 Msa1417280:CDS 50.0%
TCGGTCTTTGGTACGCTTCT+TGG + tig0024468:1794-1813 Msa1417280:CDS 50.0%
! CCGAGTTTTCATGGTCCTCA+TGG + tig0024468:1855-1874 Msa1417280:CDS 50.0%
TAAAGTCTCAGCAGCGCCAT+TGG - tig0024468:1887-1906 None:intergenic 50.0%
GCTCCTGATTTCATCAAGGG+AGG + tig0024468:1913-1932 Msa1417280:CDS 50.0%
GTTCAACTTCACCGCGAAGA+CGG - tig0024468:2023-2042 None:intergenic 50.0%
CGCTAGGATTCGAACTTGGG+TGG - tig0024468:499-518 None:intergenic 55.0%
GACCGCTTTCCCTTAGGAAC+CGG + tig0024468:582-601 Msa1417280:intron 55.0%
CTCCGGTTCCTAAGGGAAAG+CGG - tig0024468:587-606 None:intergenic 55.0%
GCTTTCCCTTAGGAACCGGA+GGG + tig0024468:586-605 Msa1417280:intron 55.0%
! CTGCAGGCTTTGTGTTGCAG+TGG + tig0024468:1349-1368 Msa1417280:CDS 55.0%
CCTTGGCATGAGCAGCTTCT+AGG - tig0024468:1588-1607 None:intergenic 55.0%
CCTAGAAGCTGCTCATGCCA+AGG + tig0024468:1585-1604 Msa1417280:CDS 55.0%
CCAAGGCCACACAACTAGCT+GGG + tig0024468:1602-1621 Msa1417280:CDS 55.0%
CAAGGCCACACAACTAGCTG+GGG + tig0024468:1603-1622 Msa1417280:CDS 55.0%
GTCCTCATGGTCTCTGCCAA+TGG + tig0024468:1868-1887 Msa1417280:CDS 55.0%
! CAATCTCGGTTTGACGGTCG+AGG - tig0024468:1966-1985 None:intergenic 55.0%
CGCTAGGATTCGAACTTGGG+TGG - tig0024468:499-518 None:intergenic 55.0%
GACCGCTTTCCCTTAGGAAC+CGG + tig0024468:582-601 Msa1417280:intron 55.0%
CTCCGGTTCCTAAGGGAAAG+CGG - tig0024468:587-606 None:intergenic 55.0%
GCTTTCCCTTAGGAACCGGA+GGG + tig0024468:586-605 Msa1417280:intron 55.0%
! CTGCAGGCTTTGTGTTGCAG+TGG + tig0024468:1349-1368 Msa1417280:CDS 55.0%
CCTTGGCATGAGCAGCTTCT+AGG - tig0024468:1588-1607 None:intergenic 55.0%
CCTAGAAGCTGCTCATGCCA+AGG + tig0024468:1585-1604 Msa1417280:CDS 55.0%
CCAAGGCCACACAACTAGCT+GGG + tig0024468:1602-1621 Msa1417280:CDS 55.0%
CAAGGCCACACAACTAGCTG+GGG + tig0024468:1603-1622 Msa1417280:CDS 55.0%
GTCCTCATGGTCTCTGCCAA+TGG + tig0024468:1868-1887 Msa1417280:CDS 55.0%
! CAATCTCGGTTTGACGGTCG+AGG - tig0024468:1966-1985 None:intergenic 55.0%
CGCTTTCCCTTAGGAACCGG+AGG + tig0024468:585-604 Msa1417280:intron 60.0%
GCCAAGGCCACACAACTAGC+TGG + tig0024468:1601-1620 Msa1417280:CDS 60.0%
CCCAGCTAGTTGTGTGGCCT+TGG - tig0024468:1605-1624 None:intergenic 60.0%
AGCCTCCCCAGCTAGTTGTG+TGG - tig0024468:1611-1630 None:intergenic 60.0%
CGCCATTGGCAGAGACCATG+AGG - tig0024468:1873-1892 None:intergenic 60.0%
CCTGTTCCTGACCGTCTTCG+CGG + tig0024468:2009-2028 Msa1417280:CDS 60.0%
ACTTCACCGCGAAGACGGTC+AGG - tig0024468:2018-2037 None:intergenic 60.0%
CGCTTTCCCTTAGGAACCGG+AGG + tig0024468:585-604 Msa1417280:intron 60.0%
GCCAAGGCCACACAACTAGC+TGG + tig0024468:1601-1620 Msa1417280:CDS 60.0%
CCCAGCTAGTTGTGTGGCCT+TGG - tig0024468:1605-1624 None:intergenic 60.0%
AGCCTCCCCAGCTAGTTGTG+TGG - tig0024468:1611-1630 None:intergenic 60.0%
CGCCATTGGCAGAGACCATG+AGG - tig0024468:1873-1892 None:intergenic 60.0%
CCTGTTCCTGACCGTCTTCG+CGG + tig0024468:2009-2028 Msa1417280:CDS 60.0%
ACTTCACCGCGAAGACGGTC+AGG - tig0024468:2018-2037 None:intergenic 60.0%
GGCCACACAACTAGCTGGGG+AGG + tig0024468:1606-1625 Msa1417280:CDS 65.0%
CCGCGAAGACGGTCAGGAAC+AGG - tig0024468:2012-2031 None:intergenic 65.0%
GGCCACACAACTAGCTGGGG+AGG + tig0024468:1606-1625 Msa1417280:CDS 65.0%
CCGCGAAGACGGTCAGGAAC+AGG - tig0024468:2012-2031 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0024468 gene 18 2086 18 ID=Msa1417280;Name=Msa1417280
tig0024468 mRNA 18 2086 18 ID=Msa1417280-mRNA-1;Parent=Msa1417280;Name=Msa1417280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=79|1|0.66|1|1|1|3|0|519
tig0024468 exon 18 407 18 ID=Msa1417280-mRNA-1:exon:23320;Parent=Msa1417280-mRNA-1
tig0024468 exon 717 1431 717 ID=Msa1417280-mRNA-1:exon:23321;Parent=Msa1417280-mRNA-1
tig0024468 exon 1556 2086 1556 ID=Msa1417280-mRNA-1:exon:23322;Parent=Msa1417280-mRNA-1
tig0024468 five_prime_UTR 18 96 18 ID=Msa1417280-mRNA-1:five_prime_utr;Parent=Msa1417280-mRNA-1
tig0024468 CDS 97 407 97 ID=Msa1417280-mRNA-1:cds;Parent=Msa1417280-mRNA-1
tig0024468 CDS 717 1431 717 ID=Msa1417280-mRNA-1:cds;Parent=Msa1417280-mRNA-1
tig0024468 CDS 1556 2086 1556 ID=Msa1417280-mRNA-1:cds;Parent=Msa1417280-mRNA-1
Gene Sequence

>Msa1417280

ATGCTAAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAATCAGAAAAGCTAGTGCAAGAAGCACTTGACCGGTTCATGATTGGCAGGACAACTCTTGTAATTGCTCATCGCCTGTCCACAATTCGCAAAGCTGACCTTGTAGCCGTGATTCAGCAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAGCTCTTCTCCAAAGGTGAAAATGGAGTCTACGCCAAGCTTATTAAGATGCAGGAGGTTGCCCATGAAAATGCTATGAATAATGCTAGGAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCCCCAATAATTGCTAGGAATTCTTCTTATGGCCGGTCACCGTATTCGCGTAGATTGTCTGATTTCTCTACATCAGATTTTAGTTTGTCACTTGATGCATCTCATCCAAATTACAAGCATGAAAAGCTTGCCTTCAAAGATCAAGCCGGTTCCTTCTGGAGACTAGTAAAAATGAACTCTCCTGAATGGCTCTATGCTTTACTTGGCTCAATCGGTTCAATTGTTTGTGGATCACTTAGTGCTTTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTACTACAATCCAGACCACAAACACATGATCCGAGAAATAGATAAGTACTGCTACTTGTTGATTGGTCTTTCATCAACTGCACTTATCTTTAATACATTGCAACATTTCTTCTGGGATATTGTCGGGGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGACGGCAGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGAATTTCTGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGACCGAATTTCGGTAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGCTTTGTGTTGCAGTGGCGTCTTGCACTTGTCCTCATTGCTGTATTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCTGGGGAGGCTATAGCCAATGTAAGAACTGTTGCAGCCTTCAATTCAGAATCGAAAATTGTTCGCCTTTTCGCCTCCAACCTTGAAACTCCACTACAAAGGTGCTTTTGGAAGGGACAGATTTCCGGAAGTGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCTTATGCACTCGGTCTTTGGTACGCTTCTTGGCTAGTGAAACATGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGCGCTGCTGAGACTTTAACATTGGCTCCTGATTTCATCAAGGGAGGTAGAGCCATGAGATCAGTCTTTGATCTCCTCGACCGTCAAACCGAGATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGCGGTGAAGTTGAACTTAAGCATGTGGATTTCTCGTATCCCACTAGACCAGATATGCCG
Protein sequence

>Msa1417280

MLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVAHENAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALLGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRQTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMP