AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1417690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1417690 MtrunA17_Chr7g0247631 98.291 702 12 0 1 702 1 702 0.0 1444
Msa1417690 MtrunA17_Chr5g0408851 51.307 612 274 7 92 700 60 650 0.0 637
Msa1417690 MtrunA17_Chr4g0023601 48.858 438 214 5 264 695 12 445 2.31e-147 438
Msa1417690 MtrunA17_Chr2g0323051 47.109 467 236 6 234 694 56 517 2.85e-141 426
Msa1417690 MtrunA17_Chr5g0400001 45.595 454 230 6 243 692 65 505 7.22e-125 382
Msa1417690 MtrunA17_Chr5g0399991 46.991 432 212 6 265 692 89 507 2.54e-123 378
Msa1417690 MtrunA17_Chr4g0055281 46.292 445 228 7 252 692 65 502 6.33e-122 374
Msa1417690 MtrunA17_Chr6g0481031 44.954 436 227 8 265 692 106 536 6.32e-121 373
Msa1417690 MtrunA17_Chr8g0388651 36.774 465 273 10 241 692 53 509 2.77e-88 286
Msa1417690 MtrunA17_Chr2g0286431 36.866 434 255 8 265 693 83 502 1.55e-86 282
Msa1417690 MtrunA17_Chr1g0154651 47.253 91 45 1 81 171 13 100 3.43e-15 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1417690 AT2G45880.1 64.062 704 226 6 1 699 1 682 0.0 925
Msa1417690 AT4G00490.1 69.762 463 136 1 238 700 72 530 0.0 711
Msa1417690 AT5G45300.3 51.570 605 275 7 92 695 110 697 0.0 609
Msa1417690 AT5G45300.2 51.570 605 273 7 92 695 96 681 0.0 609
Msa1417690 AT5G45300.1 51.570 605 275 7 92 695 96 683 0.0 608
Msa1417690 AT2G32290.1 48.085 470 229 6 236 694 43 508 8.02e-142 427
Msa1417690 AT4G15210.1 46.697 439 223 6 264 695 13 447 1.22e-139 419
Msa1417690 AT4G17090.1 48.148 432 213 6 265 692 86 510 5.97e-133 403
Msa1417690 AT4G15210.2 48.101 395 198 4 264 655 13 403 7.42e-131 393
Msa1417690 AT3G23920.1 45.767 437 224 7 265 692 106 538 2.40e-126 387
Msa1417690 AT4G15210.3 45.477 398 207 5 304 695 1 394 7.96e-123 374
Msa1417690 AT4G15210.4 45.477 398 207 5 304 695 1 394 7.96e-123 374
Msa1417690 AT5G55700.1 38.479 447 251 9 265 695 92 530 3.62e-95 305
Msa1417690 AT5G55700.2 38.304 342 191 8 366 695 34 367 3.81e-68 228
Msa1417690 AT5G18670.1 35.499 431 259 9 265 692 87 501 5.56e-68 233

Find 273 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGAATGTGGAGGCAATTT+TGG 0.132573 tig0024503:-27736 Msa1417690:CDS
ATTACTGAGGGTTCAGATTT+TGG 0.153891 tig0024503:-30429 Msa1417690:five_prime_UTR
AAGAAAGAGGGCACACTATT+TGG 0.160450 tig0024503:-26425 Msa1417690:CDS
GACGAGCGTGTTTGAGAATT+TGG 0.168540 tig0024503:+31417 None:intergenic
CCTTCCATCTGGATCATTAA+TGG 0.228989 tig0024503:+24702 None:intergenic
CCCCATTGGATTGCGGAAAT+TGG 0.229009 tig0024503:-27691 Msa1417690:CDS
TCCCTCAAGGGAGTTGCTTC+TGG 0.230220 tig0024503:-29312 Msa1417690:CDS
TACAGATATCAGGTATTTAT+TGG 0.240649 tig0024503:-25220 Msa1417690:intron
GCAATTATAATCTTAGAGTT+AGG 0.256212 tig0024503:-30062 Msa1417690:CDS
GGTGAGCATGGAAATGTTTC+GGG 0.265483 tig0024503:-30294 Msa1417690:CDS
ATGCTCCTCAAGAGTATAAT+TGG 0.266684 tig0024503:-27922 Msa1417690:CDS
AAAATCACGTTCTGGTAATC+TGG 0.293408 tig0024503:+28328 None:intergenic
ATTCCCCAGGAAAGACATTC+AGG 0.294071 tig0024503:+27619 None:intergenic
TTGATTTCATGAGAAGTTTC+CGG 0.295099 tig0024503:-27172 Msa1417690:CDS
AGTTAGCTATAACAAGGTTT+TGG 0.306669 tig0024503:-24737 Msa1417690:CDS
AGAAGCTGTTCTTGATCTTC+AGG 0.313620 tig0024503:-24221 Msa1417690:CDS
CGTTCAAACTCTATGAAGTT+TGG 0.314971 tig0024503:+24628 None:intergenic
GGAGGTTGTTGGTAAACTTT+TGG 0.324341 tig0024503:-30603 Msa1417690:five_prime_UTR
ACTACTCTCGCCGGGAATTT+CGG 0.332251 tig0024503:-31209 Msa1417690:five_prime_UTR
ATTTATTATATACAGATATC+AGG 0.333139 tig0024503:-25230 Msa1417690:intron
GGTGATTATGATGGCTTCTA+TGG 0.335535 tig0024503:-26333 Msa1417690:CDS
CTTCCATCTGGATCATTAAT+GGG 0.337375 tig0024503:+24703 None:intergenic
GACAATCCTCCCTTGATTGA+TGG 0.338381 tig0024503:-29159 Msa1417690:CDS
TTGTAGGTACCCACATTATC+TGG 0.340452 tig0024503:+26393 None:intergenic
TCTTGATCTTCAGGTATAAC+AGG 0.345551 tig0024503:-24212 Msa1417690:exon
GATGCCGATTACGACGAAAA+TGG 0.346989 tig0024503:-30318 Msa1417690:CDS
TGTTATAGCTAACTCTGTTT+AGG 0.347312 tig0024503:+24746 None:intergenic
TCCTGGTATTGGTGAGTTCC+AGG 0.351906 tig0024503:-27036 Msa1417690:intron
AATACCCCAACCGCTTTGTT+GGG 0.358724 tig0024503:+24149 None:intergenic
TGTTAGTCAAGTAGTTGATT+AGG 0.359394 tig0024503:-24075 Msa1417690:three_prime_UTR
TGAGCTTAAGCTTAAGTTGC+AGG 0.359918 tig0024503:-27867 Msa1417690:intron
CTCGCTCGTGTCGTGTGTGC+GGG 0.361504 tig0024503:+31394 None:intergenic
AAGGGAGTTGCTTCTGGCTA+TGG 0.363095 tig0024503:-29306 Msa1417690:CDS
GGTGGGAGTGGGATGGGAAC+TGG 0.366608 tig0024503:-30255 Msa1417690:CDS
ATCTGGATCATTAATGGGCT+TGG 0.366707 tig0024503:+24708 None:intergenic
ATCACATAAACAGGAACATA+TGG 0.371428 tig0024503:+28296 None:intergenic
AGGTGAGCATGGAAATGTTT+CGG 0.375514 tig0024503:-30295 Msa1417690:CDS
GGGGTATTCTGATAAAGTTT+AGG 0.378161 tig0024503:-24134 Msa1417690:three_prime_UTR
AGAAAGAGGGCACACTATTT+GGG 0.383259 tig0024503:-26424 Msa1417690:CDS
TTCCCGATCTCAAACATCTA+TGG 0.384478 tig0024503:-29205 Msa1417690:CDS
TGACTGCTGGTGGGGAATAG+TGG 0.395519 tig0024503:-27951 Msa1417690:CDS
ACAACCCTGAATGTCTTTCC+TGG 0.395545 tig0024503:-27624 Msa1417690:CDS
ACCAATTTCCGCAATCCAAT+GGG 0.401881 tig0024503:+27690 None:intergenic
ATAATTTAATGTATAAATAT+CGG 0.404668 tig0024503:+30452 None:intergenic
CTGATCCCGAGCGATTAGTT+TGG 0.407402 tig0024503:-25022 Msa1417690:CDS
GACAAGCATTATAGTCTAAA+GGG 0.407697 tig0024503:+29280 None:intergenic
CCGTCGTGCACCGAAATTCC+CGG 0.408169 tig0024503:+31199 None:intergenic
GGGTGAGGATGATGAAGAAT+TGG 0.410486 tig0024503:-30370 Msa1417690:CDS
GATCATTATCTCAATCTTCA+AGG 0.413192 tig0024503:-31153 Msa1417690:intron
ACCGGTAGCATCACATAAAC+AGG 0.415437 tig0024503:+28287 None:intergenic
AAATACCTGCTTCTCACTAA+TGG 0.416906 tig0024503:+29125 None:intergenic
GTTCTCTCTTTCTCTTCTAC+CGG 0.419911 tig0024503:+30150 None:intergenic
AGAAAGAGGTGAAGTGTTGC+CGG 0.422574 tig0024503:+31326 None:intergenic
TCGGGGATGGTAGAGATTGA+TGG 0.429329 tig0024503:-30276 Msa1417690:CDS
CTTTAGTTGATCATGGAAAC+CGG 0.430369 tig0024503:-26281 Msa1417690:CDS
GATGAAAAGTGCCTTCCATC+TGG 0.431328 tig0024503:+24691 None:intergenic
GGTATGAAAACATCTTTCAT+TGG 0.431483 tig0024503:+29258 None:intergenic
AGCAAATGTTGATGGTGTTA+TGG 0.432333 tig0024503:-27975 Msa1417690:CDS
TCTCAGGCTTTAGTTGATCA+TGG 0.433442 tig0024503:-26288 Msa1417690:CDS
GAATACCCCAACCGCTTTGT+TGG 0.437342 tig0024503:+24148 None:intergenic
GGCTATCACTGCAAGGATCT+TGG 0.439690 tig0024503:-30103 Msa1417690:CDS
CAAGAGCAAGCAGGCACTCC+TGG 0.439805 tig0024503:-30195 Msa1417690:CDS
TCAGAAGTGGACTGAGCCTC+AGG 0.439950 tig0024503:+24659 None:intergenic
ATTATGATGGCTTCTATGGC+AGG 0.443004 tig0024503:-26329 Msa1417690:CDS
AATACTCATTAAACTCTATC+CGG 0.443205 tig0024503:+27153 None:intergenic
AGTGGGATGGGAACTGGAGC+CGG 0.444427 tig0024503:-30249 Msa1417690:CDS
TTGGCAGGGCTGCGCAGGCA+TGG 0.447154 tig0024503:-30084 Msa1417690:CDS
GAAGTTGAGGACAGATCATA+TGG 0.448226 tig0024503:+29225 None:intergenic
GGATAGGTTGACGGCGGCTC+CGG 0.451638 tig0024503:+31287 None:intergenic
ATTGATGGTGGGAGTGGGAT+GGG 0.452488 tig0024503:-30261 Msa1417690:CDS
AATTCTCAGCCACACGAAAC+GGG 0.456914 tig0024503:-26372 Msa1417690:CDS
CTCCCAGCAAAATCACGTTC+TGG 0.459187 tig0024503:+28320 None:intergenic
CAATTCTCAGCCACACGAAA+CGG 0.459319 tig0024503:-26373 Msa1417690:CDS
TCAACTACTTGACTAACAAC+TGG 0.460335 tig0024503:+24080 None:intergenic
TTTGTATTCCATTACCCCAT+TGG 0.460459 tig0024503:-27705 Msa1417690:CDS
GGACAAGCATTATAGTCTAA+AGG 0.460742 tig0024503:+29279 None:intergenic
CAATTATAATCTTAGAGTTA+GGG 0.460826 tig0024503:-30061 Msa1417690:CDS
GAAGGAAAAGTAGTTCCATC+TGG 0.463042 tig0024503:+29982 None:intergenic
TTGAATGCCGGGTGGGATGT+TGG 0.467187 tig0024503:-24802 Msa1417690:CDS
CACCATAGATGTTTGAGATC+GGG 0.467798 tig0024503:+29203 None:intergenic
ATCTATTGAACCATCAATCA+AGG 0.468065 tig0024503:+29149 None:intergenic
ATCACTGCAAGGATCTTGGC+AGG 0.470853 tig0024503:-30099 Msa1417690:CDS
AGGTTTGAAATGGAGGTTGT+TGG 0.470916 tig0024503:-30614 Msa1417690:five_prime_UTR
TTCGTGTGGCTGAGAATTGT+AGG 0.472590 tig0024503:+26377 None:intergenic
GAACTGGAGCCGGTGACAAC+AGG 0.472912 tig0024503:-30239 Msa1417690:CDS
TTCATCTCCATGATTGAAGT+TGG 0.474972 tig0024503:-27119 Msa1417690:CDS
GCCAGAAGCAACTCCCTTGA+GGG 0.477029 tig0024503:+29311 None:intergenic
TCATACCTTTGCAGCAATGC+AGG 0.480344 tig0024503:+26224 None:intergenic
GCGGAGAATGAAAGAGATCT+AGG 0.480509 tig0024503:+31251 None:intergenic
GTATTGCAGGTGTTGAATGC+CGG 0.481649 tig0024503:-24814 Msa1417690:intron
AGGGAGTTGCTTCTGGCTAT+GGG 0.481665 tig0024503:-29305 Msa1417690:CDS
AGAAAAGCAGCAGAAGAAAG+AGG 0.481803 tig0024503:-26438 Msa1417690:CDS
AAATCACGTTCTGGTAATCT+GGG 0.482509 tig0024503:+28329 None:intergenic
TCCGCAATCCAATGGGGTAA+TGG 0.483794 tig0024503:+27697 None:intergenic
GGCGAGAGTAGTGGAGTTCA+AGG 0.485122 tig0024503:+31220 None:intergenic
CTCTAGCAAGGGAAGCTGGA+TGG 0.485605 tig0024503:-30014 Msa1417690:CDS
CAAAGCTAAGAGAGAGGCGC+CGG 0.488485 tig0024503:-30128 Msa1417690:CDS
CAACCCTGAATGTCTTTCCT+GGG 0.489155 tig0024503:-27623 Msa1417690:CDS
GCTGCTCTAGCAAGGGAAGC+TGG 0.494031 tig0024503:-30018 Msa1417690:CDS
GTAGAGATTGATGGTGGGAG+TGG 0.497271 tig0024503:-30267 Msa1417690:CDS
GTGTTATGGTTGACTGCTGG+TGG 0.497598 tig0024503:-27961 Msa1417690:CDS
AGCTAAGAGAGAGGCGCCGG+AGG 0.498212 tig0024503:-30125 Msa1417690:CDS
AATCGCTCGGGATCAGCAAA+TGG 0.498861 tig0024503:+25029 None:intergenic
TAAATGTGAGCTTGTTGATC+CGG 0.500589 tig0024503:-28032 Msa1417690:CDS
TGGAAACCGGGTACTTTCAA+TGG 0.501041 tig0024503:-26268 Msa1417690:CDS
GGTGAGGATGATGAAGAATT+GGG 0.501347 tig0024503:-30369 Msa1417690:CDS
AAGAGATCTAGGAGGATTGA+GGG 0.502586 tig0024503:+31262 None:intergenic
TCGGGATCAGCAAATGGCTC+TGG 0.502776 tig0024503:+25035 None:intergenic
ACCTAGTCCAACTTCAATCA+TGG 0.503665 tig0024503:+27112 None:intergenic
CCTCCATCTGTTTCCCTCAA+GGG 0.504458 tig0024503:-29324 Msa1417690:CDS
GATTGATGGTGGGAGTGGGA+TGG 0.506994 tig0024503:-30262 Msa1417690:CDS
TATCTCCAACCATGCTTCAC+AGG 0.507013 tig0024503:+27059 None:intergenic
TTGCGGATCACGGAAATTAG+CGG 0.507627 tig0024503:-30521 Msa1417690:five_prime_UTR
TACCAATTTCCGCAATCCAA+TGG 0.510010 tig0024503:+27689 None:intergenic
ATGGTGTTATGGTTGACTGC+TGG 0.511687 tig0024503:-27964 Msa1417690:CDS
AGATACCATTAGTGAGAAGC+AGG 0.512156 tig0024503:-29130 Msa1417690:intron
CAAGCAGGCACTCCTGGTGG+AGG 0.514225 tig0024503:-30189 Msa1417690:CDS
CCGTGAATAGCACGCACGCT+TGG 0.515338 tig0024503:-31446 None:intergenic
ATTGCATGGATTATAATATC+CGG 0.517718 tig0024503:+25160 None:intergenic
AAAGAGATCTAGGAGGATTG+AGG 0.518163 tig0024503:+31261 None:intergenic
TTGAAATCAGCAAATGTTGA+TGG 0.518512 tig0024503:-27983 Msa1417690:CDS
GGCTAGAGGGCCAGATAATG+TGG 0.519736 tig0024503:-26403 Msa1417690:CDS
GGATGATGAAGAATTGGGAA+TGG 0.521880 tig0024503:-30364 Msa1417690:CDS
GTTATGGTTGACTGCTGGTG+GGG 0.522259 tig0024503:-27959 Msa1417690:CDS
GCCTCCATCTGTTTCCCTCA+AGG 0.524523 tig0024503:-29325 Msa1417690:CDS
TTCGGTGCACGACGGATCGA+CGG 0.524927 tig0024503:-31191 Msa1417690:five_prime_UTR
GAGGCTCAGTCCACTTCTGA+TGG 0.525869 tig0024503:-24656 Msa1417690:CDS
TTACAAGAGACTCTTTCAAA+TGG 0.526474 tig0024503:-27894 Msa1417690:CDS
AATAGCTGATGTAGTGGTGC+AGG 0.527234 tig0024503:+30483 None:intergenic
TTTATCAGTGTTGTCAATTG+CGG 0.527268 tig0024503:-30538 Msa1417690:five_prime_UTR
GACGAAAATGGAGGTGAGCA+TGG 0.528889 tig0024503:-30306 Msa1417690:CDS
GGCACACTATTTGGGCTAGA+GGG 0.530326 tig0024503:-26416 Msa1417690:CDS
CCATGCTTCACAGGACAAGA+TGG 0.530598 tig0024503:+27068 None:intergenic
GGTTGGAGATATCCTGGTAT+TGG 0.531486 tig0024503:-27047 Msa1417690:CDS
TGTTATGGTTGACTGCTGGT+GGG 0.531507 tig0024503:-27960 Msa1417690:CDS
TCTAGCAAGGGAAGCTGGAT+GGG 0.532361 tig0024503:-30013 Msa1417690:CDS
GGGATCCTGCATTGCTGCAA+AGG 0.534136 tig0024503:-26229 Msa1417690:intron
AGTTTGAACGATTTGTCAAG+AGG 0.534218 tig0024503:-24615 Msa1417690:CDS
CCACCATAGATGTTTGAGAT+CGG 0.535969 tig0024503:+29202 None:intergenic
ACTGATATGCAAAGGCTGGT+TGG 0.537832 tig0024503:-30396 Msa1417690:CDS
GACTTGCCAAACTAATCGCT+CGG 0.538712 tig0024503:+25016 None:intergenic
GATGATGAAGAATTGGGAAT+GGG 0.539015 tig0024503:-30363 Msa1417690:CDS
ATATGACGGCGGCGAGAAAG+AGG 0.541260 tig0024503:+31312 None:intergenic
ACAGCAATGTTAAAGAGAAA+CGG 0.542903 tig0024503:-25116 Msa1417690:CDS
ATGCGATTCTCACGAGGGTA+GGG 0.543361 tig0024503:+31369 None:intergenic
TCCATTACCCCATTGGATTG+CGG 0.544817 tig0024503:-27698 Msa1417690:CDS
ATCTCAAACATCTATGGTGG+GGG 0.545777 tig0024503:-29199 Msa1417690:CDS
CTTGTCCTGTGAAGCATGGT+TGG 0.548278 tig0024503:-27064 Msa1417690:CDS
ACGTTCCTTATCTATTCCCC+AGG 0.549619 tig0024503:+27606 None:intergenic
TCTCGCTCGTGTCGTGTGTG+CGG 0.549728 tig0024503:+31393 None:intergenic
GGATGGGTGGTTCTTCCAGA+TGG 0.550123 tig0024503:-29997 Msa1417690:CDS
ACATTAAATTATATTACTGA+GGG 0.553300 tig0024503:-30441 Msa1417690:five_prime_UTR
TCTTTCCTGGGGAATAGATA+AGG 0.553960 tig0024503:-27611 Msa1417690:CDS
CCTCAAGAGTATAATTGGAA+TGG 0.554372 tig0024503:-27917 Msa1417690:CDS
ATGTCATTGCTGCTCTAGCA+AGG 0.555742 tig0024503:-30026 Msa1417690:CDS
ACAGATGGAGGCTGTTGAGA+AGG 0.557652 tig0024503:+29336 None:intergenic
CGGCGGCTCCGGTGATATGA+CGG 0.557830 tig0024503:+31298 None:intergenic
GTCAAGTAGTTGATTAGGAT+AGG 0.558123 tig0024503:-24070 Msa1417690:three_prime_UTR
TTGAGGGACGGATAGGTTGA+CGG 0.559435 tig0024503:+31278 None:intergenic
TGTTTGAGATCGGGAAGTTG+AGG 0.559441 tig0024503:+29212 None:intergenic
TATGCAAAGGCTGGTTGGAA+TGG 0.559974 tig0024503:-30391 Msa1417690:CDS
TGAACTCCACTACTCTCGCC+GGG 0.560000 tig0024503:-31217 Msa1417690:five_prime_UTR
AAGCATGGTTGGAGATATCC+TGG 0.560357 tig0024503:-27053 Msa1417690:CDS
CCATTCCAATTATACTCTTG+AGG 0.560764 tig0024503:+27917 None:intergenic
GATCTTCGATTGCCTCCACC+AGG 0.561586 tig0024503:+30177 None:intergenic
CATGCTGCTGAATTAGCTGC+CGG 0.562553 tig0024503:-25179 Msa1417690:CDS
TTTGGTCGTTCCATCAGAAG+TGG 0.562705 tig0024503:+24646 None:intergenic
CGATCTCAAACATCTATGGT+GGG 0.562927 tig0024503:-29201 Msa1417690:CDS
ATACCCCAACCGCTTTGTTG+GGG 0.563405 tig0024503:+24150 None:intergenic
TACATTAAATTATATTACTG+AGG 0.563470 tig0024503:-30442 Msa1417690:five_prime_UTR
ATGCAAAGGCTGGTTGGAAT+GGG 0.564244 tig0024503:-30390 Msa1417690:CDS
TTCCCCAGGAAAGACATTCA+GGG 0.566249 tig0024503:+27620 None:intergenic
TATTGCAGGTGTTGAATGCC+GGG 0.566994 tig0024503:-24813 Msa1417690:intron
CAAAAGAAACCCGTTTCGTG+TGG 0.568671 tig0024503:+26363 None:intergenic
TCACATAAACAGGAACATAT+GGG 0.570006 tig0024503:+28297 None:intergenic
AGCTGCTTTAGTATACCATC+CGG 0.570265 tig0024503:+28013 None:intergenic
TCTCGCCGCCGTCATATCAC+CGG 0.570986 tig0024503:-31306 Msa1417690:five_prime_UTR
TCCTTGCAGTGATAGCCCTC+CGG 0.572338 tig0024503:+30109 None:intergenic
GAAATTCCCGGCGAGAGTAG+TGG 0.572941 tig0024503:+31211 None:intergenic
AGGAGGATTGAGGGACGGAT+AGG 0.573206 tig0024503:+31271 None:intergenic
ATTGGATTGCGGAAATTGGT+AGG 0.573552 tig0024503:-27687 Msa1417690:CDS
CCGATCTCAAACATCTATGG+TGG 0.574081 tig0024503:-29202 Msa1417690:CDS
GGGATGGTAGAGATTGATGG+TGG 0.574890 tig0024503:-30273 Msa1417690:CDS
GGCAACTGATATGCAAAGGC+TGG 0.575220 tig0024503:-30400 Msa1417690:CDS
CATGCGATTCTCACGAGGGT+AGG 0.575429 tig0024503:+31368 None:intergenic
TTGAACTCCACTACTCTCGC+CGG 0.576631 tig0024503:-31218 Msa1417690:five_prime_UTR
AGATATCAGGTATTTATTGG+TGG 0.576841 tig0024503:-25217 Msa1417690:CDS
ACTTGCCAAACTAATCGCTC+GGG 0.578201 tig0024503:+25017 None:intergenic
TTACAGGGACAGATGCCAGC+TGG 0.579767 tig0024503:-29399 Msa1417690:intron
TAGCTAACTCTGTTTAGGCA+AGG 0.580773 tig0024503:+24751 None:intergenic
ACCTGGAACTCACCAATACC+AGG 0.580960 tig0024503:+27035 None:intergenic
GCATAGCCATCACGATTGCA+TGG 0.581501 tig0024503:+25146 None:intergenic
GCATGGAAATGTTTCGGGGA+TGG 0.582480 tig0024503:-30289 Msa1417690:CDS
AAGCCCATTAATGATCCAGA+TGG 0.584215 tig0024503:-24706 Msa1417690:CDS
CTGCTTGCTCTTGAAACTCG+TGG 0.584946 tig0024503:+30205 None:intergenic
TAGAGATTGATGGTGGGAGT+GGG 0.585198 tig0024503:-30266 Msa1417690:CDS
ACTGAGCCTCAGGTATGTAA+AGG 0.587637 tig0024503:+24669 None:intergenic
GAGGCTGTTGAGAAGGCACA+TGG 0.587814 tig0024503:+29343 None:intergenic
TTGCTGAAACCTGTTGTCAC+CGG 0.588256 tig0024503:+30230 None:intergenic
TCCTGTTTATGTGATGCTAC+CGG 0.588479 tig0024503:-28288 Msa1417690:intron
GAAAAGCAGCAGAAGAAAGA+GGG 0.589579 tig0024503:-26437 Msa1417690:CDS
TGAAGCATGCGATTCTCACG+AGG 0.589990 tig0024503:+31363 None:intergenic
CGATTTGTCAAGAGGATGCA+CGG 0.590836 tig0024503:-24607 Msa1417690:intron
AGATCATATGGAGATGGAGA+TGG 0.591075 tig0024503:+29237 None:intergenic
GGGCACACTATTTGGGCTAG+AGG 0.593100 tig0024503:-26417 Msa1417690:CDS
GAGGACAGATCATATGGAGA+TGG 0.593231 tig0024503:+29231 None:intergenic
TTTCATCCTTTACATACCTG+AGG 0.594089 tig0024503:-24675 Msa1417690:CDS
GAGAGGTCGGACTGCTGTGG+AGG 0.594354 tig0024503:-27578 Msa1417690:intron
GTGTTGTCAATTGCGGATCA+CGG 0.596207 tig0024503:-30531 Msa1417690:five_prime_UTR
ATCACGTTCTGGTAATCTGG+GGG 0.596266 tig0024503:+28331 None:intergenic
ATGGTATACTAAAGCAGCTG+AGG 0.597687 tig0024503:-28009 Msa1417690:CDS
GCTAAGAGAGAGGCGCCGGA+GGG 0.598262 tig0024503:-30124 Msa1417690:CDS
CATGCTTCACAGGACAAGAT+GGG 0.600529 tig0024503:+27069 None:intergenic
CACGAGTTTCAAGAGCAAGC+AGG 0.600604 tig0024503:-30204 Msa1417690:CDS
AGCCAGAAGCAACTCCCTTG+AGG 0.601428 tig0024503:+29310 None:intergenic
ACTGCAGAATTACCACCAGC+TGG 0.602253 tig0024503:+29384 None:intergenic
GATCTCAAACATCTATGGTG+GGG 0.602792 tig0024503:-29200 Msa1417690:CDS
AGCTGATGTAGTGGTGCAGG+CGG 0.604497 tig0024503:+30486 None:intergenic
AGCAAGGGAAGCTGGATGGG+TGG 0.608234 tig0024503:-30010 Msa1417690:CDS
AAGGCTGGTTGGAATGGGTG+AGG 0.612680 tig0024503:-30385 Msa1417690:CDS
GCCGGAGGGCTATCACTGCA+AGG 0.616217 tig0024503:-30110 Msa1417690:CDS
GAGCAAGCAGGCACTCCTGG+TGG 0.616975 tig0024503:-30192 Msa1417690:CDS
TTATGGCAACTGATATGCAA+AGG 0.616993 tig0024503:-30404 Msa1417690:CDS
AGTGCATTCTCACTAACGAC+GGG 0.621609 tig0024503:+24775 None:intergenic
AGTGGAGTTCAAGGACAGAT+CGG 0.622898 tig0024503:+31229 None:intergenic
TATAATCCATGCAATCGTGA+TGG 0.623009 tig0024503:-25152 Msa1417690:CDS
TGACAATCTACAGAATCAGT+AGG 0.623322 tig0024503:-30564 Msa1417690:five_prime_UTR
TCGCTCGTGTCGTGTGTGCG+GGG 0.623846 tig0024503:+31395 None:intergenic
AGAGAACAAAGCTAAGAGAG+AGG 0.624197 tig0024503:-30134 Msa1417690:CDS
AGGCAATCGAAGATCTAGAC+CGG 0.625299 tig0024503:-30169 Msa1417690:CDS
CCATCTTGTCCTGTGAAGCA+TGG 0.625653 tig0024503:-27068 Msa1417690:CDS
GCCGATTACGACGAAAATGG+AGG 0.626886 tig0024503:-30315 Msa1417690:CDS
TTTAGTTGATCATGGAAACC+GGG 0.629705 tig0024503:-26280 Msa1417690:CDS
CCATTAATGATCCAGATGGA+AGG 0.631548 tig0024503:-24702 Msa1417690:CDS
TCCATGATTGAAGTTGGACT+AGG 0.633760 tig0024503:-27113 Msa1417690:CDS
TTGTTAAATAGCTGATGTAG+TGG 0.637063 tig0024503:+30477 None:intergenic
CTGCTGGTGGGGAATAGTGG+AGG 0.638557 tig0024503:-27948 Msa1417690:CDS
ACTCCCTTGAGGGAAACAGA+TGG 0.640870 tig0024503:+29321 None:intergenic
TCTATTGAACCATCAATCAA+GGG 0.641869 tig0024503:+29150 None:intergenic
AAACAGAGTTAGCTATAACA+AGG 0.642740 tig0024503:-24743 Msa1417690:CDS
GATCTAGGAGGATTGAGGGA+CGG 0.646162 tig0024503:+31266 None:intergenic
GCAGGTGTTGAATGCCGGGT+GGG 0.648360 tig0024503:-24809 Msa1417690:intron
TACCCCAACCGCTTTGTTGG+GGG 0.649366 tig0024503:+24151 None:intergenic
TGTCATTGCTGCTCTAGCAA+GGG 0.650040 tig0024503:-30025 Msa1417690:CDS
TGCAGGTGTTGAATGCCGGG+TGG 0.651385 tig0024503:-24810 Msa1417690:intron
AACCCTGAATGTCTTTCCTG+GGG 0.652109 tig0024503:-27622 Msa1417690:CDS
AATCACGTTCTGGTAATCTG+GGG 0.653035 tig0024503:+28330 None:intergenic
TGTGAGCTTGTTGATCCGGA+TGG 0.654767 tig0024503:-28028 Msa1417690:CDS
TATGAAAGACGAAGACGATG+AGG 0.655074 tig0024503:-30340 Msa1417690:CDS
TGGTATACTAAAGCAGCTGA+GGG 0.655208 tig0024503:-28008 Msa1417690:CDS
GGGTAGTCCAACATCCCACC+CGG 0.657727 tig0024503:+24795 None:intergenic
GGATGGTAGAGATTGATGGT+GGG 0.658760 tig0024503:-30272 Msa1417690:CDS
TCACTGCAAGGATCTTGGCA+GGG 0.658891 tig0024503:-30098 Msa1417690:CDS
CCCTTGAGGGAAACAGATGG+AGG 0.658899 tig0024503:+29324 None:intergenic
TTTGAGAGGTCGGACTGCTG+TGG 0.661975 tig0024503:-27581 Msa1417690:CDS
CCGGGAATTTCGGTGCACGA+CGG 0.665361 tig0024503:-31199 Msa1417690:five_prime_UTR
GAATGTGTGCAAATCAACAC+AGG 0.666849 tig0024503:+25076 None:intergenic
AAGTGCATTCTCACTAACGA+CGG 0.670203 tig0024503:+24774 None:intergenic
CAGGGACAGATGCCAGCTGG+TGG 0.672850 tig0024503:-29396 Msa1417690:CDS
GGGTATCTTAGCTCTCCACA+TGG 0.681100 tig0024503:+27089 None:intergenic
ATTGAACCATCAATCAAGGG+AGG 0.685955 tig0024503:+29153 None:intergenic
GCTAGAGGGCCAGATAATGT+GGG 0.688613 tig0024503:-26402 Msa1417690:CDS
TCACGTTCTGGTAATCTGGG+GGG 0.695800 tig0024503:+28332 None:intergenic
GAAGCATGCGATTCTCACGA+GGG 0.700217 tig0024503:+31364 None:intergenic
GGAGTTCAAGGACAGATCGG+CGG 0.703365 tig0024503:+31232 None:intergenic
GAGAATGAAAGAGATCTAGG+AGG 0.705267 tig0024503:+31254 None:intergenic
GAAGTTGGACTAGGTCCATG+TGG 0.708297 tig0024503:-27104 Msa1417690:CDS
CGGCTCCGGTGATATGACGG+CGG 0.709742 tig0024503:+31301 None:intergenic
CGGTGCACGACGGATCGACG+GGG 0.710733 tig0024503:-31189 Msa1417690:five_prime_UTR
CCAATTTCCGCAATCCAATG+GGG 0.711257 tig0024503:+27691 None:intergenic
GTGAGCATGGAAATGTTTCG+GGG 0.727987 tig0024503:-30293 Msa1417690:CDS
AGGCTGTTGAGAAGGCACAT+GGG 0.748056 tig0024503:+29344 None:intergenic
AGGGACGGATAGGTTGACGG+CGG 0.779236 tig0024503:+31281 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTACTGATTTTAATTAAA+AGG - tig0024503:24735-24754 Msa1417690:CDS 10.0%
!!! TTTAGAAATAAATGTTTTTA+TGG - tig0024503:26412-26431 Msa1417690:CDS 10.0%
!!! GTAAAATTTTGATATTTATT+TGG + tig0024503:26492-26511 None:intergenic 10.0%
!! AAATTATATGCAAAATAAAA+CGG + tig0024503:27056-27075 None:intergenic 10.0%
!!! TGTAAGCTTAATTTAATTTA+TGG - tig0024503:24801-24820 Msa1417690:CDS 15.0%
!!! TAATTTAGACATGATTTTTT+AGG - tig0024503:24849-24868 Msa1417690:intron 15.0%
!! TACATTAAATTATATTACTG+AGG - tig0024503:25041-25060 Msa1417690:CDS 15.0%
!! ACATTAAATTATATTACTGA+GGG - tig0024503:25042-25061 Msa1417690:CDS 15.0%
!!! AGACATTTAAAATATCAAAT+AGG + tig0024503:25958-25977 None:intergenic 15.0%
!! AAATATAAAAGAAATCAAGA+GGG + tig0024503:26626-26645 None:intergenic 15.0%
!! AAAATATAAAAGAAATCAAG+AGG + tig0024503:26627-26646 None:intergenic 15.0%
!!! TTCAAATTTTCTTAACTATA+GGG + tig0024503:26990-27009 None:intergenic 15.0%
!!! TTTCAAATTTTCTTAACTAT+AGG + tig0024503:26991-27010 None:intergenic 15.0%
!! TTGCATATAATTTCAAAATA+TGG - tig0024503:27063-27082 Msa1417690:CDS 15.0%
!! TCAACAATATAAATAGAATA+TGG + tig0024503:27411-27430 None:intergenic 15.0%
!! TATTTAAGAAAATAATTACC+TGG + tig0024503:28468-28487 None:intergenic 15.0%
!! ATTTATTATATACAGATATC+AGG - tig0024503:30253-30272 Msa1417690:CDS 15.0%
!!! ATAGAAGATAAATTTTATCA+AGG + tig0024503:30503-30522 None:intergenic 15.0%
!! AAATTTATCTTCTATCTAAT+TGG - tig0024503:30508-30527 Msa1417690:five_prime_UTR 15.0%
!!! TTTAACTTTACTTGTATTAT+TGG - tig0024503:31067-31086 Msa1417690:intron 15.0%
!! TAAAAAGAGGAAAATATCAA+AGG + tig0024503:24764-24783 None:intergenic 20.0%
!!! CAATTTTCTTTTCTAAAAAG+AGG + tig0024503:24777-24796 None:intergenic 20.0%
!!! ATGATTTTTTAGGTTTGAAA+TGG - tig0024503:24859-24878 Msa1417690:intron 20.0%
!! CAATTATAATCTTAGAGTTA+GGG - tig0024503:25422-25441 Msa1417690:intron 20.0%
!!! ATCTAACTAACATTTAGTTT+CGG + tig0024503:25575-25594 None:intergenic 20.0%
!! AAATGTTAGTTAGATTTGTA+CGG - tig0024503:25580-25599 Msa1417690:intron 20.0%
!! TCATAAACAAATGTTGAATA+GGG + tig0024503:25828-25847 None:intergenic 20.0%
!! ATCATAAACAAATGTTGAAT+AGG + tig0024503:25829-25848 None:intergenic 20.0%
!!! TTGTTATATAGTTTAGTTCT+TGG - tig0024503:25917-25936 Msa1417690:intron 20.0%
!!! ATACACATTTTACTCATTAA+AGG + tig0024503:26549-26568 None:intergenic 20.0%
!! TTAAATGTGTCTATCAAATT+TGG + tig0024503:26665-26684 None:intergenic 20.0%
!! ATTTGATAGACACATTTAAA+AGG - tig0024503:26666-26685 Msa1417690:intron 20.0%
!!! TTTATGTTGTTTAAGCATAA+TGG - tig0024503:26742-26761 Msa1417690:intron 20.0%
!! TCTTTATATGATTATCTTGT+TGG - tig0024503:27352-27371 Msa1417690:intron 20.0%
!! TATTTATATTGTTGACAGTT+GGG - tig0024503:27416-27435 Msa1417690:intron 20.0%
!! TGAATTATCTCATATACATT+TGG - tig0024503:27705-27724 Msa1417690:CDS 20.0%
!! GAATTATCTCATATACATTT+GGG - tig0024503:27706-27725 Msa1417690:CDS 20.0%
!! TAACACCATAATATGTATAA+AGG + tig0024503:28145-28164 None:intergenic 20.0%
!!! CATTTATCAAATGTTTTTCA+AGG - tig0024503:28204-28223 Msa1417690:intron 20.0%
!!! TTGTGTGTTGTATTTTTTTT+AGG - tig0024503:28282-28301 Msa1417690:intron 20.0%
!! TTCACAATGAAAAATTGAAT+CGG + tig0024503:28555-28574 None:intergenic 20.0%
!!! TTTTTAAAAATACCTTGTAC+AGG - tig0024503:28659-28678 Msa1417690:intron 20.0%
!!! TTTTAAAAATACCTTGTACA+GGG - tig0024503:28660-28679 Msa1417690:intron 20.0%
!! TTCATTCAACATCTATATAT+AGG - tig0024503:28775-28794 Msa1417690:intron 20.0%
!! TCATTCAACATCTATATATA+GGG - tig0024503:28776-28795 Msa1417690:intron 20.0%
!! TGATATCATTATAGAAAAGA+TGG - tig0024503:29430-29449 Msa1417690:intron 20.0%
!! ATTAAAATTAATAGCACAAG+TGG + tig0024503:29777-29796 None:intergenic 20.0%
!!! TACATCATTTTTAGTTTTTG+CGG - tig0024503:30183-30202 Msa1417690:CDS 20.0%
!!! TGTTCTATTTTAGACAAATT+TGG - tig0024503:30585-30604 Msa1417690:five_prime_UTR 20.0%
!!! GTTCTATTTTAGACAAATTT+GGG - tig0024503:30586-30605 Msa1417690:five_prime_UTR 20.0%
!!! TTTTATTCTGTAACTGTATT+TGG + tig0024503:30617-30636 None:intergenic 20.0%
!!! TTAACAAATTTTTTCACAAG+AGG + tig0024503:30938-30957 None:intergenic 20.0%
!!! TCTTGTGAAAAAATTTGTTA+AGG - tig0024503:30937-30956 Msa1417690:intron 20.0%
! TATCGAAATAAGTTATAAGC+TGG - tig0024503:24560-24579 Msa1417690:intron 25.0%
!! TAAGCTGTTAGTTTAAAATC+TGG - tig0024503:24652-24671 Msa1417690:CDS 25.0%
!!! ATTTTTTAGGTTTGAAATGG+AGG - tig0024503:24862-24881 Msa1417690:intron 25.0%
!! AACTTTTGGTAAACTTTGAT+TGG - tig0024503:24894-24913 Msa1417690:intron 25.0%
! GCAATTATAATCTTAGAGTT+AGG - tig0024503:25421-25440 Msa1417690:intron 25.0%
!! ATAATTACCTGAGATTTTGA+AGG + tig0024503:25522-25541 None:intergenic 25.0%
! AATGTTAGTTAGATTTGTAC+GGG - tig0024503:25581-25600 Msa1417690:intron 25.0%
! AGAAGATGCATACTAAAAAA+GGG + tig0024503:25724-25743 None:intergenic 25.0%
!!! TTTTTCGAAGAATAAACAAC+TGG + tig0024503:25805-25824 None:intergenic 25.0%
!! ACTTAATTTTTGATGTAGTG+TGG - tig0024503:25869-25888 Msa1417690:intron 25.0%
!!! AAATGTTTTTATGGTTTCTG+TGG - tig0024503:26421-26440 Msa1417690:CDS 25.0%
!! CTTGCTTTGTGAATTTTATA+TGG - tig0024503:26587-26606 Msa1417690:intron 25.0%
! AAAGGATAAACACATGATTA+AGG - tig0024503:26684-26703 Msa1417690:intron 25.0%
! ATTTAGAGGAAAAAGTTGAA+TGG - tig0024503:26849-26868 Msa1417690:intron 25.0%
! TTTGGATAATCATTCATCTT+GGG + tig0024503:27020-27039 None:intergenic 25.0%
!! TTTTGGATAATCATTCATCT+TGG + tig0024503:27021-27040 None:intergenic 25.0%
! AGATGAATGATTATCCAAAA+AGG - tig0024503:27021-27040 Msa1417690:intron 25.0%
! GATGAATGATTATCCAAAAA+GGG - tig0024503:27022-27041 Msa1417690:intron 25.0%
! AATTAAAGAAACCAAGAAAC+AGG + tig0024503:27262-27281 None:intergenic 25.0%
!! GATGTTCTCAGTATATATTT+TGG - tig0024503:27325-27344 Msa1417690:intron 25.0%
! CTATTTATATTGTTGACAGT+TGG - tig0024503:27415-27434 Msa1417690:intron 25.0%
! ATTTATATTGTTGACAGTTG+GGG - tig0024503:27417-27436 Msa1417690:intron 25.0%
! CTATCAGTGAAAAAAATATC+TGG + tig0024503:27828-27847 None:intergenic 25.0%
!!! TATTTTTTTCACTGATAGAG+AGG - tig0024503:27830-27849 Msa1417690:intron 25.0%
!!! ATTTTTTTCACTGATAGAGA+GGG - tig0024503:27831-27850 Msa1417690:intron 25.0%
! ATCATGATTTAATTCAAGCT+CGG + tig0024503:28103-28122 None:intergenic 25.0%
! TCCATCCTTTATACATATTA+TGG - tig0024503:28137-28156 Msa1417690:intron 25.0%
! ACCATAATATGTATAAAGGA+TGG + tig0024503:28141-28160 None:intergenic 25.0%
!! TAATTTTCTTGGTATAACAG+AGG + tig0024503:28251-28270 None:intergenic 25.0%
! CTGTTATACCAAGAAAATTA+AGG - tig0024503:28251-28270 Msa1417690:intron 25.0%
! AATACTCATTAAACTCTATC+CGG + tig0024503:28333-28352 None:intergenic 25.0%
!! AGAGTTTAATGAGTATTTTG+AGG - tig0024503:28336-28355 Msa1417690:CDS 25.0%
!!! TTTAATGAGTATTTTGAGGA+TGG - tig0024503:28340-28359 Msa1417690:CDS 25.0%
! TCACAATGAAAAATTGAATC+GGG + tig0024503:28554-28573 None:intergenic 25.0%
! AAACAAAGAAATTTGAGCAA+CGG + tig0024503:28583-28602 None:intergenic 25.0%
! ATCAGAAGTTTCTAATTGAT+GGG - tig0024503:29746-29765 Msa1417690:intron 25.0%
!! GGTCAAATATTTTACATTGA+GGG + tig0024503:29975-29994 None:intergenic 25.0%
!! AGGTCAAATATTTTACATTG+AGG + tig0024503:29976-29995 None:intergenic 25.0%
!!! ACATCATTTTTAGTTTTTGC+GGG - tig0024503:30184-30203 Msa1417690:CDS 25.0%
! TACAGATATCAGGTATTTAT+TGG - tig0024503:30263-30282 Msa1417690:CDS 25.0%
!! ATTGCATGGATTATAATATC+CGG + tig0024503:30326-30345 None:intergenic 25.0%
!! ATGATCTAAAATACACATTG+TGG - tig0024503:30642-30661 Msa1417690:intron 25.0%
!! TGATCTAAAATACACATTGT+GGG - tig0024503:30643-30662 Msa1417690:intron 25.0%
! GTTTAATCAATGTCAGATAA+AGG + tig0024503:30974-30993 None:intergenic 25.0%
! AACGAATCAAATTAGAAGAA+TGG - tig0024503:30991-31010 Msa1417690:intron 25.0%
GATCATTATCTCAATCTTCA+AGG - tig0024503:24330-24349 Msa1417690:intron 30.0%
CTAACAGCTTATAAGCTTAT+AGG + tig0024503:24643-24662 None:intergenic 30.0%
! GAAAGAGTATATTACACATG+TGG - tig0024503:24823-24842 Msa1417690:intron 30.0%
TTTATCAGTGTTGTCAATTG+CGG - tig0024503:24945-24964 Msa1417690:intron 30.0%
TTGTTAAATAGCTGATGTAG+TGG + tig0024503:25009-25028 None:intergenic 30.0%
! TACTTTTCCTTCAAAATCTC+AGG - tig0024503:25512-25531 Msa1417690:intron 30.0%
CAACTTCTTGTGTAAAAACA+AGG - tig0024503:25619-25638 Msa1417690:intron 30.0%
TTCTTGTGTAAAAACAAGGT+AGG - tig0024503:25623-25642 Msa1417690:intron 30.0%
TCTTGTGTAAAAACAAGGTA+GGG - tig0024503:25624-25643 Msa1417690:intron 30.0%
CAGAAGATGCATACTAAAAA+AGG + tig0024503:25725-25744 None:intergenic 30.0%
!!! CTTTTTTAGTATGCATCTTC+TGG - tig0024503:25723-25742 Msa1417690:intron 30.0%
TAAGATTTGCAGATACAAAG+TGG + tig0024503:25986-26005 None:intergenic 30.0%
GACAAGCATTATAGTCTAAA+GGG + tig0024503:26206-26225 None:intergenic 30.0%
GGTATGAAAACATCTTTCAT+TGG + tig0024503:26228-26247 None:intergenic 30.0%
TCTATTGAACCATCAATCAA+GGG + tig0024503:26336-26355 None:intergenic 30.0%
ATCTATTGAACCATCAATCA+AGG + tig0024503:26337-26356 None:intergenic 30.0%
! TTCTAAAAGAGATCAAGAAG+AGG + tig0024503:26399-26418 None:intergenic 30.0%
GGGTACATCATACAAATTTA+AGG - tig0024503:26715-26734 Msa1417690:intron 30.0%
! TCTATTTTCTGTTCTCGTAA+GGG - tig0024503:26930-26949 Msa1417690:intron 30.0%
TCACATAAACAGGAACATAT+GGG + tig0024503:27189-27208 None:intergenic 30.0%
ATCACATAAACAGGAACATA+TGG + tig0024503:27190-27209 None:intergenic 30.0%
AGAGTAAAATCATAGCTTAC+CGG + tig0024503:27217-27236 None:intergenic 30.0%
! TTCTATTAAGTCCTGTTTCT+TGG - tig0024503:27248-27267 Msa1417690:intron 30.0%
TTTATATTGTTGACAGTTGG+GGG - tig0024503:27418-27437 Msa1417690:intron 30.0%
TTGAAATCAGCAAATGTTGA+TGG - tig0024503:27500-27519 Msa1417690:intron 30.0%
TTACAAGAGACTCTTTCAAA+TGG - tig0024503:27589-27608 Msa1417690:CDS 30.0%
TATCTCATATACATTTGGGT+AGG - tig0024503:27710-27729 Msa1417690:CDS 30.0%
GAGCTTGAATTAAATCATGA+TGG - tig0024503:28102-28121 Msa1417690:intron 30.0%
! GAATTAAATCATGATGGTGA+AGG - tig0024503:28108-28127 Msa1417690:intron 30.0%
AATAGATTCATTCAGAGGAA+TGG + tig0024503:28179-28198 None:intergenic 30.0%
TTCCTCTGAATGAATCTATT+TGG - tig0024503:28179-28198 Msa1417690:intron 30.0%
ATCCAAATAGATTCATTCAG+AGG + tig0024503:28184-28203 None:intergenic 30.0%
! ATTGCATGCCTTAATTTTCT+TGG + tig0024503:28262-28281 None:intergenic 30.0%
TTGATTTCATGAGAAGTTTC+CGG - tig0024503:28311-28330 Msa1417690:CDS 30.0%
! TACAGGGACATTTTCTTAAA+AGG - tig0024503:28676-28695 Msa1417690:intron 30.0%
!! CTTTCATTGGCATTTTGTTT+AGG - tig0024503:28743-28762 Msa1417690:intron 30.0%
GATTAGCAAATAGGTTAAGA+AGG + tig0024503:28974-28993 None:intergenic 30.0%
GAGAAAGATGATTAGCAAAT+AGG + tig0024503:28983-29002 None:intergenic 30.0%
!!! AATGGCAAAATTAGCTTTTG+AGG - tig0024503:29233-29252 Msa1417690:CDS 30.0%
!!! ATGGCAAAATTAGCTTTTGA+GGG - tig0024503:29234-29253 Msa1417690:CDS 30.0%
! TCATTAAGCATATGATGATG+CGG + tig0024503:29352-29371 None:intergenic 30.0%
TCATTCCACCTATTTGATTA+GGG - tig0024503:29380-29399 Msa1417690:CDS 30.0%
TACTAAAGCCCTAATCAAAT+AGG + tig0024503:29391-29410 None:intergenic 30.0%
AGATGGTTGAATCTTGATTT+AGG - tig0024503:29447-29466 Msa1417690:intron 30.0%
TATCCAAACAATTGAGTTCT+AGG + tig0024503:29601-29620 None:intergenic 30.0%
CTTCTGATGGTATGAAAAAT+TGG + tig0024503:29734-29753 None:intergenic 30.0%
CATCAATTAGAAACTTCTGA+TGG + tig0024503:29747-29766 None:intergenic 30.0%
CATCAGAAGTTTCTAATTGA+TGG - tig0024503:29745-29764 Msa1417690:intron 30.0%
TCAGAAGTTTCTAATTGATG+GGG - tig0024503:29747-29766 Msa1417690:intron 30.0%
AAAATTAATAGCACAAGTGG+AGG + tig0024503:29774-29793 None:intergenic 30.0%
GGTGCTAGAAAATAATTTCT+AGG - tig0024503:29832-29851 Msa1417690:intron 30.0%
TTGAGGGAAAATAATGTTCA+AGG + tig0024503:29959-29978 None:intergenic 30.0%
GTCTATTAAAGATAATTCCC+TGG + tig0024503:30029-30048 None:intergenic 30.0%
CAGAAAATGCTATTCATTCT+TGG + tig0024503:30088-30107 None:intergenic 30.0%
! TTGATAACTCCTAGTCAAAT+GGG + tig0024503:30155-30174 None:intergenic 30.0%
! ATTGATAACTCCTAGTCAAA+TGG + tig0024503:30156-30175 None:intergenic 30.0%
ACTAGGAGTTATCAATTTGT+AGG - tig0024503:30160-30179 Msa1417690:CDS 30.0%
AGATATCAGGTATTTATTGG+TGG - tig0024503:30266-30285 Msa1417690:CDS 30.0%
ACAGCAATGTTAAAGAGAAA+CGG - tig0024503:30367-30386 Msa1417690:CDS 30.0%
GGAAGAACTTATTAGAAGAT+TGG - tig0024503:30555-30574 Msa1417690:five_prime_UTR 30.0%
TGTTATAGCTAACTCTGTTT+AGG + tig0024503:30740-30759 None:intergenic 30.0%
AAACAGAGTTAGCTATAACA+AGG - tig0024503:30740-30759 Msa1417690:intron 30.0%
! AGTTAGCTATAACAAGGTTT+TGG - tig0024503:30746-30765 Msa1417690:intron 30.0%
AAGTCCCAAATTTCTCTAAT+GGG - tig0024503:31014-31033 Msa1417690:intron 30.0%
TATGCCCATTAGAGAAATTT+GGG + tig0024503:31021-31040 None:intergenic 30.0%
AGATAAAAGGTTACTGAATG+TGG + tig0024503:31128-31147 None:intergenic 30.0%
! TCAGTAACCTTTTATCTGAT+TGG - tig0024503:31131-31150 Msa1417690:intron 30.0%
! ACCTTTTATCTGATTGGATT+TGG - tig0024503:31137-31156 Msa1417690:intron 30.0%
AATATCAGTTAACAGTTGCT+AGG - tig0024503:31197-31216 Msa1417690:five_prime_UTR 30.0%
! TTAACAGTTGCTAGGTTTTA+GGG - tig0024503:31205-31224 Msa1417690:five_prime_UTR 30.0%
TGTTAGTCAAGTAGTTGATT+AGG - tig0024503:31408-31427 Msa1417690:five_prime_UTR 30.0%
AATAATTCTCTCATCCCCTA+AGG + tig0024503:24693-24712 None:intergenic 35.0%
TGACAATCTACAGAATCAGT+AGG - tig0024503:24919-24938 Msa1417690:intron 35.0%
! ATTACTGAGGGTTCAGATTT+TGG - tig0024503:25054-25073 Msa1417690:CDS 35.0%
!! GGGTTCAGATTTTGGTATTA+TGG - tig0024503:25062-25081 Msa1417690:CDS 35.0%
TTATGGCAACTGATATGCAA+AGG - tig0024503:25079-25098 Msa1417690:CDS 35.0%
GATGATGAAGAATTGGGAAT+GGG - tig0024503:25120-25139 Msa1417690:CDS 35.0%
TGTACAAAACACCAAATGGT+GGG - tig0024503:25650-25669 Msa1417690:intron 35.0%
!! ATTTGCTGTTTCTCCATGAA+AGG - tig0024503:25750-25769 Msa1417690:intron 35.0%
ACTGGACGAAAAAAATGATC+AGG + tig0024503:25787-25806 None:intergenic 35.0%
AGAAGAAAAGGTTCCAATGT+GGG + tig0024503:26059-26078 None:intergenic 35.0%
! CTTTTCTTCTCAACCTTACA+GGG - tig0024503:26069-26088 Msa1417690:intron 35.0%
GGACAAGCATTATAGTCTAA+AGG + tig0024503:26207-26226 None:intergenic 35.0%
AAATACCTGCTTCTCACTAA+TGG + tig0024503:26361-26380 None:intergenic 35.0%
AGTGAGAAGCAGGTATTTAA+TGG - tig0024503:26363-26382 Msa1417690:CDS 35.0%
AGGTATTTAATGGAGCTGAT+TGG - tig0024503:26373-26392 Msa1417690:CDS 35.0%
TTATGGTTTCTGTGGTGATA+TGG - tig0024503:26429-26448 Msa1417690:CDS 35.0%
ACACATGATTAAGGTTCATG+AGG - tig0024503:26693-26712 Msa1417690:intron 35.0%
CACATGATTAAGGTTCATGA+GGG - tig0024503:26694-26713 Msa1417690:intron 35.0%
ACATGATTAAGGTTCATGAG+GGG - tig0024503:26695-26714 Msa1417690:intron 35.0%
AAGGATAGATAGTGTATGGT+AGG - tig0024503:26821-26840 Msa1417690:intron 35.0%
TATGGTAGGCATGAATTTAG+AGG - tig0024503:26835-26854 Msa1417690:intron 35.0%
! CTCTATTTTCTGTTCTCGTA+AGG - tig0024503:26929-26948 Msa1417690:intron 35.0%
! AACGGAAGAATATCCCTTTT+TGG + tig0024503:27038-27057 None:intergenic 35.0%
CAAAATATGGTGCCTTTAGA+AGG - tig0024503:27076-27095 Msa1417690:CDS 35.0%
AAATCACGTTCTGGTAATCT+GGG + tig0024503:27157-27176 None:intergenic 35.0%
AAAATCACGTTCTGGTAATC+TGG + tig0024503:27158-27177 None:intergenic 35.0%
TAATGTTAATCGACGCGTAT+AGG + tig0024503:27384-27403 None:intergenic 35.0%
!! TAAATGTGAGCTTGTTGATC+CGG - tig0024503:27451-27470 Msa1417690:intron 35.0%
!! AGCAAATGTTGATGGTGTTA+TGG - tig0024503:27508-27527 Msa1417690:intron 35.0%
! ATGCTCCTCAAGAGTATAAT+TGG - tig0024503:27561-27580 Msa1417690:intron 35.0%
CCATTCCAATTATACTCTTG+AGG + tig0024503:27569-27588 None:intergenic 35.0%
! CCTCAAGAGTATAATTGGAA+TGG - tig0024503:27566-27585 Msa1417690:intron 35.0%
! ATACGCTACTTTAATCATCG+TGG - tig0024503:27647-27666 Msa1417690:CDS 35.0%
! TACGCTACTTTAATCATCGT+GGG - tig0024503:27648-27667 Msa1417690:CDS 35.0%
TTTGTATTCCATTACCCCAT+TGG - tig0024503:27778-27797 Msa1417690:intron 35.0%
TGAATGCTGTCAGAAAGAAA+TGG - tig0024503:28030-28049 Msa1417690:CDS 35.0%
GTTTACAGATGTCTACACTA+TGG + tig0024503:28081-28100 None:intergenic 35.0%
TTCATCTCCATGATTGAAGT+TGG - tig0024503:28364-28383 Msa1417690:intron 35.0%
TAAGAAAATGTCCCTGTACA+AGG + tig0024503:28674-28693 None:intergenic 35.0%
TGTGATAGAAGAAAGTAAGG+AGG + tig0024503:28721-28740 None:intergenic 35.0%
GCATGTGATAGAAGAAAGTA+AGG + tig0024503:28724-28743 None:intergenic 35.0%
CTTCTATCACATGCTTTCAT+TGG - tig0024503:28730-28749 Msa1417690:intron 35.0%
!! ATTGGCATTTTGTTTAGGAC+TGG - tig0024503:28748-28767 Msa1417690:intron 35.0%
!! TTGGCATTTTGTTTAGGACT+GGG - tig0024503:28749-28768 Msa1417690:intron 35.0%
AGGGACAATTGTTTGTTTGT+TGG - tig0024503:28795-28814 Msa1417690:intron 35.0%
TGAAGTGTATGTATGCATAC+AGG + tig0024503:28939-28958 None:intergenic 35.0%
TATGCATACATACACTTCAG+AGG - tig0024503:28940-28959 Msa1417690:intron 35.0%
CTTTAGTTGATCATGGAAAC+CGG - tig0024503:29202-29221 Msa1417690:CDS 35.0%
TTTAGTTGATCATGGAAACC+GGG - tig0024503:29203-29222 Msa1417690:CDS 35.0%
!!! ATTTTGCCATTGAAAGTACC+CGG + tig0024503:29224-29243 None:intergenic 35.0%
CTCATTCCACCTATTTGATT+AGG - tig0024503:29379-29398 Msa1417690:CDS 35.0%
TAAAGCCCTAATCAAATAGG+TGG + tig0024503:29388-29407 None:intergenic 35.0%
! TTGATTAGGGCTTTAGTAGT+TGG - tig0024503:29393-29412 Msa1417690:CDS 35.0%
TGGTTGAATCTTGATTTAGG+TGG - tig0024503:29450-29469 Msa1417690:intron 35.0%
GAATCTTGATTTAGGTGGTT+TGG - tig0024503:29455-29474 Msa1417690:intron 35.0%
AGACCTAGAACTCAATTGTT+TGG - tig0024503:29595-29614 Msa1417690:intron 35.0%
GATGGTATGAAAAATTGGCA+AGG + tig0024503:29729-29748 None:intergenic 35.0%
! TTTCTAGGAATGCATTTCTC+AGG - tig0024503:29847-29866 Msa1417690:intron 35.0%
TATAATCCATGCAATCGTGA+TGG - tig0024503:30331-30350 Msa1417690:CDS 35.0%
CTTGCATAAGCAATTACACT+AGG - tig0024503:30534-30553 Msa1417690:five_prime_UTR 35.0%
CTTCCATCTGGATCATTAAT+GGG + tig0024503:30783-30802 None:intergenic 35.0%
TTTCATCCTTTACATACCTG+AGG - tig0024503:30808-30827 Msa1417690:intron 35.0%
CGTTCAAACTCTATGAAGTT+TGG + tig0024503:30858-30877 None:intergenic 35.0%
AGTTTGAACGATTTGTCAAG+AGG - tig0024503:30868-30887 Msa1417690:intron 35.0%
GAAGTCCCAAATTTCTCTAA+TGG - tig0024503:31013-31032 Msa1417690:intron 35.0%
CTATGCCCATTAGAGAAATT+TGG + tig0024503:31022-31041 None:intergenic 35.0%
!! TACTTGTATTATTGGCTCCA+AGG - tig0024503:31075-31094 Msa1417690:intron 35.0%
!! ACTTGTATTATTGGCTCCAA+GGG - tig0024503:31076-31095 Msa1417690:intron 35.0%
TTACTGAATGTGGAATGCAT+GGG + tig0024503:31118-31137 None:intergenic 35.0%
GCCAAATCCAATCAGATAAA+AGG + tig0024503:31141-31160 None:intergenic 35.0%
! GTTAACAGTTGCTAGGTTTT+AGG - tig0024503:31204-31223 Msa1417690:five_prime_UTR 35.0%
TCTTGATCTTCAGGTATAAC+AGG - tig0024503:31271-31290 Msa1417690:five_prime_UTR 35.0%
GGCAGAAAAAAAGAATCTTG+TGG - tig0024503:31292-31311 Msa1417690:five_prime_UTR 35.0%
! GGGGTATTCTGATAAAGTTT+AGG - tig0024503:31349-31368 Msa1417690:five_prime_UTR 35.0%
TCAACTACTTGACTAACAAC+TGG + tig0024503:31406-31425 None:intergenic 35.0%
GTCAAGTAGTTGATTAGGAT+AGG - tig0024503:31413-31432 Msa1417690:five_prime_UTR 35.0%
AAGAGATCTAGGAGGATTGA+GGG + tig0024503:24224-24243 None:intergenic 40.0%
AAAGAGATCTAGGAGGATTG+AGG + tig0024503:24225-24244 None:intergenic 40.0%
GAGAATGAAAGAGATCTAGG+AGG + tig0024503:24232-24251 None:intergenic 40.0%
! AGGTTTGAAATGGAGGTTGT+TGG - tig0024503:24869-24888 Msa1417690:intron 40.0%
!! GGAGGTTGTTGGTAAACTTT+TGG - tig0024503:24880-24899 Msa1417690:intron 40.0%
GGTGAGGATGATGAAGAATT+GGG - tig0024503:25114-25133 Msa1417690:CDS 40.0%
GGATGATGAAGAATTGGGAA+TGG - tig0024503:25119-25138 Msa1417690:CDS 40.0%
TATGAAAGACGAAGACGATG+AGG - tig0024503:25143-25162 Msa1417690:CDS 40.0%
! ACCTCCATTTTCGTCGTAAT+CGG + tig0024503:25172-25191 None:intergenic 40.0%
AGGTGAGCATGGAAATGTTT+CGG - tig0024503:25188-25207 Msa1417690:CDS 40.0%
GTTCTCTCTTTCTCTTCTAC+CGG + tig0024503:25336-25355 None:intergenic 40.0%
AGAGAACAAAGCTAAGAGAG+AGG - tig0024503:25349-25368 Msa1417690:intron 40.0%
GAAGGAAAAGTAGTTCCATC+TGG + tig0024503:25504-25523 None:intergenic 40.0%
ATTTGTACGGGTTCAAGTCT+TGG - tig0024503:25593-25612 Msa1417690:intron 40.0%
GCTGTGTACAAAACACCAAA+TGG - tig0024503:25646-25665 Msa1417690:intron 40.0%
GTGTACAAAACACCAAATGG+TGG - tig0024503:25649-25668 Msa1417690:intron 40.0%
TCTCAGAAAAACTCCCACAT+TGG - tig0024503:26043-26062 Msa1417690:intron 40.0%
GAGAAGAAAAGGTTCCAATG+TGG + tig0024503:26060-26079 None:intergenic 40.0%
CCTGTAAGGTTGAGAAGAAA+AGG + tig0024503:26071-26090 None:intergenic 40.0%
! CCTTTTCTTCTCAACCTTAC+AGG - tig0024503:26068-26087 Msa1417690:intron 40.0%
AGATCATATGGAGATGGAGA+TGG + tig0024503:26249-26268 None:intergenic 40.0%
GAAGTTGAGGACAGATCATA+TGG + tig0024503:26261-26280 None:intergenic 40.0%
TTCCCGATCTCAAACATCTA+TGG - tig0024503:26278-26297 Msa1417690:CDS 40.0%
! CACCATAGATGTTTGAGATC+GGG + tig0024503:26283-26302 None:intergenic 40.0%
! CCACCATAGATGTTTGAGAT+CGG + tig0024503:26284-26303 None:intergenic 40.0%
CGATCTCAAACATCTATGGT+GGG - tig0024503:26282-26301 Msa1417690:CDS 40.0%
GATCTCAAACATCTATGGTG+GGG - tig0024503:26283-26302 Msa1417690:CDS 40.0%
ATCTCAAACATCTATGGTGG+GGG - tig0024503:26284-26303 Msa1417690:CDS 40.0%
ATTGAACCATCAATCAAGGG+AGG + tig0024503:26333-26352 None:intergenic 40.0%
AGATACCATTAGTGAGAAGC+AGG - tig0024503:26353-26372 Msa1417690:CDS 40.0%
TTTCTGTGGTGATATGGTGA+TGG - tig0024503:26435-26454 Msa1417690:CDS 40.0%
!! ATGGTGATGGAATGATCTAG+TGG - tig0024503:26448-26467 Msa1417690:CDS 40.0%
TCATTTGGGGAGGAGAATAT+AGG - tig0024503:26794-26813 Msa1417690:intron 40.0%
AGGGAAGGATAGATAGTGTA+TGG - tig0024503:26817-26836 Msa1417690:intron 40.0%
!! GTTGAATGGCTTTAAGCTAG+AGG - tig0024503:26863-26882 Msa1417690:intron 40.0%
CCAAGAGACTTACCTTCTAA+AGG + tig0024503:27091-27110 None:intergenic 40.0%
! CCTTTAGAAGGTAAGTCTCT+TGG - tig0024503:27088-27107 Msa1417690:CDS 40.0%
AATCACGTTCTGGTAATCTG+GGG + tig0024503:27156-27175 None:intergenic 40.0%
! TTACCAGAACGTGATTTTGC+TGG - tig0024503:27160-27179 Msa1417690:CDS 40.0%
! TACCAGAACGTGATTTTGCT+GGG - tig0024503:27161-27180 Msa1417690:CDS 40.0%
TCCTGTTTATGTGATGCTAC+CGG - tig0024503:27195-27214 Msa1417690:intron 40.0%
! AGCTGCTTTAGTATACCATC+CGG + tig0024503:27473-27492 None:intergenic 40.0%
ATGGTATACTAAAGCAGCTG+AGG - tig0024503:27474-27493 Msa1417690:intron 40.0%
TGGTATACTAAAGCAGCTGA+GGG - tig0024503:27475-27494 Msa1417690:intron 40.0%
! TGAGCTTAAGCTTAAGTTGC+AGG - tig0024503:27616-27635 Msa1417690:CDS 40.0%
! GTCATGTCTTTTCACGAATG+TGG - tig0024503:27735-27754 Msa1417690:CDS 40.0%
! ATGTCTTTTCACGAATGTGG+AGG - tig0024503:27738-27757 Msa1417690:CDS 40.0%
ACCAATTTCCGCAATCCAAT+GGG + tig0024503:27796-27815 None:intergenic 40.0%
TACCAATTTCCGCAATCCAA+TGG + tig0024503:27797-27816 None:intergenic 40.0%
ATTGGATTGCGGAAATTGGT+AGG - tig0024503:27796-27815 Msa1417690:intron 40.0%
TCTTTCCTGGGGAATAGATA+AGG - tig0024503:27872-27891 Msa1417690:CDS 40.0%
!! GATAAGGAACGTGTTTTGAG+AGG - tig0024503:27888-27907 Msa1417690:CDS 40.0%
!!! ATGTTTTTCAAGGATCCGAG+AGG - tig0024503:28214-28233 Msa1417690:intron 40.0%
TCCATGATTGAAGTTGGACT+AGG - tig0024503:28370-28389 Msa1417690:intron 40.0%
ACCTAGTCCAACTTCAATCA+TGG + tig0024503:28374-28393 None:intergenic 40.0%
CAAAGAAATTTGAGCAACGG+AGG + tig0024503:28580-28599 None:intergenic 40.0%
! CAGCAGAATGAGGATTTTCT+TGG + tig0024503:28622-28641 None:intergenic 40.0%
CCATAGTCTGTGACAATACA+CGG + tig0024503:28866-28885 None:intergenic 40.0%
! AAGAAAGAGGGCACACTATT+TGG - tig0024503:29058-29077 Msa1417690:intron 40.0%
! AGAAAGAGGGCACACTATTT+GGG - tig0024503:29059-29078 Msa1417690:intron 40.0%
TTGTAGGTACCCACATTATC+TGG + tig0024503:29093-29112 None:intergenic 40.0%
!! AAACGGGTTTCTTTTGCGAT+GGG - tig0024503:29127-29146 Msa1417690:intron 40.0%
GGTGATTATGATGGCTTCTA+TGG - tig0024503:29150-29169 Msa1417690:CDS 40.0%
ATTATGATGGCTTCTATGGC+AGG - tig0024503:29154-29173 Msa1417690:CDS 40.0%
!!! ATGGCAGGTTTTTTCTCAAC+TGG - tig0024503:29169-29188 Msa1417690:CDS 40.0%
! TTTTCTCAACTGGTACTCTC+AGG - tig0024503:29179-29198 Msa1417690:CDS 40.0%
! TCTCAGGCTTTAGTTGATCA+TGG - tig0024503:29195-29214 Msa1417690:CDS 40.0%
! ATTTAGGTGGTTTGGACATG+TGG - tig0024503:29463-29482 Msa1417690:intron 40.0%
! TTTAGGTGGTTTGGACATGT+GGG - tig0024503:29464-29483 Msa1417690:intron 40.0%
TATAGATTCCGCAGTAAGGA+GGG - tig0024503:29496-29515 Msa1417690:intron 40.0%
AGTAAGGAGGGTAGATTAGA+TGG - tig0024503:29508-29527 Msa1417690:intron 40.0%
GGAAGACCAAGAAAAACTGT+AGG - tig0024503:29557-29576 Msa1417690:intron 40.0%
! GTTTCGCCTACAGTTTTTCT+TGG + tig0024503:29566-29585 None:intergenic 40.0%
TTTGTTGCACAAAACTAGCG+CGG - tig0024503:29811-29830 Msa1417690:intron 40.0%
TGAGCTGTTTATCATGACCA+GGG - tig0024503:30009-30028 Msa1417690:CDS 40.0%
AATGCTTGTCCCATTTGACT+AGG - tig0024503:30143-30162 Msa1417690:CDS 40.0%
GAATGTGTGCAAATCAACAC+AGG + tig0024503:30410-30429 None:intergenic 40.0%
ACATTGTGGGTATGTATTGC+AGG - tig0024503:30656-30675 Msa1417690:intron 40.0%
AAGTGCATTCTCACTAACGA+CGG + tig0024503:30712-30731 None:intergenic 40.0%
TAGCTAACTCTGTTTAGGCA+AGG + tig0024503:30735-30754 None:intergenic 40.0%
!! ATCTGGATCATTAATGGGCT+TGG + tig0024503:30778-30797 None:intergenic 40.0%
AAGCCCATTAATGATCCAGA+TGG - tig0024503:30777-30796 Msa1417690:intron 40.0%
CCTTCCATCTGGATCATTAA+TGG + tig0024503:30784-30803 None:intergenic 40.0%
CCATTAATGATCCAGATGGA+AGG - tig0024503:30781-30800 Msa1417690:intron 40.0%
GATAAAAGGACACTATCCCT+TGG + tig0024503:31095-31114 None:intergenic 40.0%
TACTGAATGTGGAATGCATG+GGG + tig0024503:31117-31136 None:intergenic 40.0%
GTTACTGAATGTGGAATGCA+TGG + tig0024503:31119-31138 None:intergenic 40.0%
! ATTGTGTCTTTTCTCACTGC+AGG - tig0024503:31239-31258 Msa1417690:five_prime_UTR 40.0%
AGAAGCTGTTCTTGATCTTC+AGG - tig0024503:31262-31281 Msa1417690:five_prime_UTR 40.0%
TTATAGTTCCCCCAACAAAG+CGG - tig0024503:31324-31343 Msa1417690:five_prime_UTR 40.0%
GACGAGCGTGTTTGAGAATT+TGG + tig0024503:24069-24088 None:intergenic 45.0%
!! AGAAAGAGGTGAAGTGTTGC+CGG + tig0024503:24160-24179 None:intergenic 45.0%
GCGGAGAATGAAAGAGATCT+AGG + tig0024503:24235-24254 None:intergenic 45.0%
AGTGGAGTTCAAGGACAGAT+CGG + tig0024503:24257-24276 None:intergenic 45.0%
CATTGCCAAACAGAGCCTTA+GGG - tig0024503:24675-24694 Msa1417690:CDS 45.0%
ATTGCCAAACAGAGCCTTAG+GGG - tig0024503:24676-24695 Msa1417690:CDS 45.0%
GTGTTGTCAATTGCGGATCA+CGG - tig0024503:24952-24971 Msa1417690:intron 45.0%
TTGCGGATCACGGAAATTAG+CGG - tig0024503:24962-24981 Msa1417690:intron 45.0%
AATAGCTGATGTAGTGGTGC+AGG + tig0024503:25003-25022 None:intergenic 45.0%
ACTGATATGCAAAGGCTGGT+TGG - tig0024503:25087-25106 Msa1417690:CDS 45.0%
! TATGCAAAGGCTGGTTGGAA+TGG - tig0024503:25092-25111 Msa1417690:CDS 45.0%
! ATGCAAAGGCTGGTTGGAAT+GGG - tig0024503:25093-25112 Msa1417690:CDS 45.0%
GGGTGAGGATGATGAAGAAT+TGG - tig0024503:25113-25132 Msa1417690:CDS 45.0%
! GATGCCGATTACGACGAAAA+TGG - tig0024503:25165-25184 Msa1417690:CDS 45.0%
GGTGAGCATGGAAATGTTTC+GGG - tig0024503:25189-25208 Msa1417690:CDS 45.0%
GTGAGCATGGAAATGTTTCG+GGG - tig0024503:25190-25209 Msa1417690:CDS 45.0%
! GGATGGTAGAGATTGATGGT+GGG - tig0024503:25211-25230 Msa1417690:CDS 45.0%
!! TAGAGATTGATGGTGGGAGT+GGG - tig0024503:25217-25236 Msa1417690:CDS 45.0%
TTGCTGAAACCTGTTGTCAC+CGG + tig0024503:25256-25275 None:intergenic 45.0%
AGGCAATCGAAGATCTAGAC+CGG - tig0024503:25314-25333 Msa1417690:intron 45.0%
ATGTCATTGCTGCTCTAGCA+AGG - tig0024503:25457-25476 Msa1417690:intron 45.0%
TGTCATTGCTGCTCTAGCAA+GGG - tig0024503:25458-25477 Msa1417690:intron 45.0%
CATACTAAAAAAGGGCAGCC+CGG + tig0024503:25716-25735 None:intergenic 45.0%
!! TGCTGTTTCTCCATGAAAGG+AGG - tig0024503:25753-25772 Msa1417690:intron 45.0%
!! GCTGTTTCTCCATGAAAGGA+GGG - tig0024503:25754-25773 Msa1417690:intron 45.0%
GAGGACAGATCATATGGAGA+TGG + tig0024503:26255-26274 None:intergenic 45.0%
! TGTTTGAGATCGGGAAGTTG+AGG + tig0024503:26274-26293 None:intergenic 45.0%
CCGATCTCAAACATCTATGG+TGG - tig0024503:26281-26300 Msa1417690:CDS 45.0%
! AAACATCTATGGTGGGGGAT+GGG - tig0024503:26289-26308 Msa1417690:CDS 45.0%
GACAATCCTCCCTTGATTGA+TGG - tig0024503:26324-26343 Msa1417690:CDS 45.0%
!! AAGCATAATGGATCCTGAGC+TGG - tig0024503:26754-26773 Msa1417690:intron 45.0%
TTTGGGGAGGAGAATATAGG+AGG - tig0024503:26797-26816 Msa1417690:intron 45.0%
TTGGGGAGGAGAATATAGGA+GGG - tig0024503:26798-26817 Msa1417690:intron 45.0%
!! GAATGGCTTTAAGCTAGAGG+AGG - tig0024503:26866-26885 Msa1417690:intron 45.0%
GGGAATGTCAGCAATCTGTA+AGG + tig0024503:27134-27153 None:intergenic 45.0%
ATCACGTTCTGGTAATCTGG+GGG + tig0024503:27155-27174 None:intergenic 45.0%
ACCGGTAGCATCACATAAAC+AGG + tig0024503:27199-27218 None:intergenic 45.0%
!! ATGGTGTTATGGTTGACTGC+TGG - tig0024503:27519-27538 Msa1417690:intron 45.0%
TGTTATGGTTGACTGCTGGT+GGG - tig0024503:27523-27542 Msa1417690:intron 45.0%
! CACGAATGTGGAGGCAATTT+TGG - tig0024503:27747-27766 Msa1417690:CDS 45.0%
TCCATTACCCCATTGGATTG+CGG - tig0024503:27785-27804 Msa1417690:intron 45.0%
CCAATTTCCGCAATCCAATG+GGG + tig0024503:27795-27814 None:intergenic 45.0%
ACAACCCTGAATGTCTTTCC+TGG - tig0024503:27859-27878 Msa1417690:intron 45.0%
CAACCCTGAATGTCTTTCCT+GGG - tig0024503:27860-27879 Msa1417690:intron 45.0%
AACCCTGAATGTCTTTCCTG+GGG - tig0024503:27861-27880 Msa1417690:intron 45.0%
TTCCCCAGGAAAGACATTCA+GGG + tig0024503:27866-27885 None:intergenic 45.0%
ATTCCCCAGGAAAGACATTC+AGG + tig0024503:27867-27886 None:intergenic 45.0%
ACGTTCCTTATCTATTCCCC+AGG + tig0024503:27880-27899 None:intergenic 45.0%
!!! AGGAACGTGTTTTGAGAGGT+CGG - tig0024503:27892-27911 Msa1417690:CDS 45.0%
CATGCTTCACAGGACAAGAT+GGG + tig0024503:28417-28436 None:intergenic 45.0%
TATCTCCAACCATGCTTCAC+AGG + tig0024503:28427-28446 None:intergenic 45.0%
AAGCATGGTTGGAGATATCC+TGG - tig0024503:28430-28449 Msa1417690:intron 45.0%
GGTTGGAGATATCCTGGTAT+TGG - tig0024503:28436-28455 Msa1417690:intron 45.0%
!!! TTTTGAGGCTCAGCAGAATG+AGG + tig0024503:28632-28651 None:intergenic 45.0%
CCGTGTATTGTCACAGACTA+TGG - tig0024503:28863-28882 Msa1417690:intron 45.0%
CTGATCATAGCACTGCACAA+AGG + tig0024503:29007-29026 None:intergenic 45.0%
TTCGTGTGGCTGAGAATTGT+AGG + tig0024503:29109-29128 None:intergenic 45.0%
CAATTCTCAGCCACACGAAA+CGG - tig0024503:29110-29129 Msa1417690:intron 45.0%
AATTCTCAGCCACACGAAAC+GGG - tig0024503:29111-29130 Msa1417690:intron 45.0%
CAAAAGAAACCCGTTTCGTG+TGG + tig0024503:29123-29142 None:intergenic 45.0%
!! GAAACGGGTTTCTTTTGCGA+TGG - tig0024503:29126-29145 Msa1417690:intron 45.0%
!! AACGGGTTTCTTTTGCGATG+GGG - tig0024503:29128-29147 Msa1417690:intron 45.0%
TGGAAACCGGGTACTTTCAA+TGG - tig0024503:29215-29234 Msa1417690:CDS 45.0%
TCATACCTTTGCAGCAATGC+AGG + tig0024503:29262-29281 None:intergenic 45.0%
! TTAGGTGGTTTGGACATGTG+GGG - tig0024503:29465-29484 Msa1417690:intron 45.0%
GACCTATAGATTCCGCAGTA+AGG - tig0024503:29492-29511 Msa1417690:intron 45.0%
CTCCTTACTGCGGAATCTAT+AGG + tig0024503:29497-29516 None:intergenic 45.0%
CTATAGATTCCGCAGTAAGG+AGG - tig0024503:29495-29514 Msa1417690:intron 45.0%
CTAATCTACCCTCCTTACTG+CGG + tig0024503:29507-29526 None:intergenic 45.0%
AAGGAGGGTAGATTAGATGG+AGG - tig0024503:29511-29530 Msa1417690:intron 45.0%
GGGTAGATTAGATGGAGGAT+AGG - tig0024503:29516-29535 Msa1417690:intron 45.0%
! CAGCTCACTTTGAAGAACTC+AGG + tig0024503:29996-30015 None:intergenic 45.0%
GTGAGCTGTTTATCATGACC+AGG - tig0024503:30008-30027 Msa1417690:CDS 45.0%
! TAGTTTTTGCGGGTGTGTTG+TGG - tig0024503:30194-30213 Msa1417690:CDS 45.0%
ACTTGCCAAACTAATCGCTC+GGG + tig0024503:30469-30488 None:intergenic 45.0%
GACTTGCCAAACTAATCGCT+CGG + tig0024503:30470-30489 None:intergenic 45.0%
!! GTATTGCAGGTGTTGAATGC+CGG - tig0024503:30669-30688 Msa1417690:intron 45.0%
!! TATTGCAGGTGTTGAATGCC+GGG - tig0024503:30670-30689 Msa1417690:intron 45.0%
AGTGCATTCTCACTAACGAC+GGG + tig0024503:30711-30730 None:intergenic 45.0%
!! GATGAAAAGTGCCTTCCATC+TGG + tig0024503:30795-30814 None:intergenic 45.0%
ACTGAGCCTCAGGTATGTAA+AGG + tig0024503:30817-30836 None:intergenic 45.0%
TTTGGTCGTTCCATCAGAAG+TGG + tig0024503:30840-30859 None:intergenic 45.0%
CGATTTGTCAAGAGGATGCA+CGG - tig0024503:30876-30895 Msa1417690:intron 45.0%
GTGGAATGCATGGGGATAAA+AGG + tig0024503:31109-31128 None:intergenic 45.0%
! AATACCCCAACCGCTTTGTT+GGG + tig0024503:31337-31356 None:intergenic 45.0%
!! ATAATTTAATGTATAAATAT+CGG + tig0024503:25034-25053 None:intergenic 5.0%
!!! TTTAAAAAAATATATTTTTG+AGG + tig0024503:28647-28666 None:intergenic 5.0%
ATGCGATTCTCACGAGGGTA+GGG + tig0024503:24117-24136 None:intergenic 50.0%
GAAGCATGCGATTCTCACGA+GGG + tig0024503:24122-24141 None:intergenic 50.0%
TGAAGCATGCGATTCTCACG+AGG + tig0024503:24123-24142 None:intergenic 50.0%
! TTGAGGGACGGATAGGTTGA+CGG + tig0024503:24208-24227 None:intergenic 50.0%
GATCTAGGAGGATTGAGGGA+CGG + tig0024503:24220-24239 None:intergenic 50.0%
TTGAACTCCACTACTCTCGC+CGG - tig0024503:24265-24284 Msa1417690:intron 50.0%
ACTACTCTCGCCGGGAATTT+CGG - tig0024503:24274-24293 Msa1417690:intron 50.0%
GCATTGCCAAACAGAGCCTT+AGG - tig0024503:24674-24693 Msa1417690:CDS 50.0%
TCATCCCCTAAGGCTCTGTT+TGG + tig0024503:24683-24702 None:intergenic 50.0%
GGCAACTGATATGCAAAGGC+TGG - tig0024503:25083-25102 Msa1417690:CDS 50.0%
GCCGATTACGACGAAAATGG+AGG - tig0024503:25168-25187 Msa1417690:CDS 50.0%
GACGAAAATGGAGGTGAGCA+TGG - tig0024503:25177-25196 Msa1417690:CDS 50.0%
GCATGGAAATGTTTCGGGGA+TGG - tig0024503:25194-25213 Msa1417690:CDS 50.0%
TCGGGGATGGTAGAGATTGA+TGG - tig0024503:25207-25226 Msa1417690:CDS 50.0%
GGGATGGTAGAGATTGATGG+TGG - tig0024503:25210-25229 Msa1417690:CDS 50.0%
!! GTAGAGATTGATGGTGGGAG+TGG - tig0024503:25216-25235 Msa1417690:CDS 50.0%
!! ATTGATGGTGGGAGTGGGAT+GGG - tig0024503:25222-25241 Msa1417690:intron 50.0%
CTGCTTGCTCTTGAAACTCG+TGG + tig0024503:25281-25300 None:intergenic 50.0%
CACGAGTTTCAAGAGCAAGC+AGG - tig0024503:25279-25298 Msa1417690:intron 50.0%
GGCTATCACTGCAAGGATCT+TGG - tig0024503:25380-25399 Msa1417690:intron 50.0%
ATCACTGCAAGGATCTTGGC+AGG - tig0024503:25384-25403 Msa1417690:intron 50.0%
TCACTGCAAGGATCTTGGCA+GGG - tig0024503:25385-25404 Msa1417690:intron 50.0%
TCTAGCAAGGGAAGCTGGAT+GGG - tig0024503:25470-25489 Msa1417690:intron 50.0%
CTCCATGAAAGGAGGGACTA+TGG - tig0024503:25761-25780 Msa1417690:intron 50.0%
ACTGCAGAATTACCACCAGC+TGG + tig0024503:26102-26121 None:intergenic 50.0%
! AGGCTGTTGAGAAGGCACAT+GGG + tig0024503:26142-26161 None:intergenic 50.0%
ACAGATGGAGGCTGTTGAGA+AGG + tig0024503:26150-26169 None:intergenic 50.0%
CCTCCATCTGTTTCCCTCAA+GGG - tig0024503:26159-26178 Msa1417690:intron 50.0%
ACTCCCTTGAGGGAAACAGA+TGG + tig0024503:26165-26184 None:intergenic 50.0%
! AAGGGAGTTGCTTCTGGCTA+TGG - tig0024503:26177-26196 Msa1417690:intron 50.0%
! AGGGAGTTGCTTCTGGCTAT+GGG - tig0024503:26178-26197 Msa1417690:intron 50.0%
! CAAACATCTATGGTGGGGGA+TGG - tig0024503:26288-26307 Msa1417690:CDS 50.0%
! AACATCTATGGTGGGGGATG+GGG - tig0024503:26290-26309 Msa1417690:CDS 50.0%
! ACGACCAAGGTGGACTCATT+TGG - tig0024503:26779-26798 Msa1417690:intron 50.0%
! CGACCAAGGTGGACTCATTT+GGG - tig0024503:26780-26799 Msa1417690:intron 50.0%
! GACCAAGGTGGACTCATTTG+GGG - tig0024503:26781-26800 Msa1417690:intron 50.0%
GGAGGAGAATATAGGAGGGA+AGG - tig0024503:26802-26821 Msa1417690:intron 50.0%
TCACGTTCTGGTAATCTGGG+GGG + tig0024503:27154-27173 None:intergenic 50.0%
CTCCCAGCAAAATCACGTTC+TGG + tig0024503:27166-27185 None:intergenic 50.0%
!! TGTGAGCTTGTTGATCCGGA+TGG - tig0024503:27455-27474 Msa1417690:intron 50.0%
GTGTTATGGTTGACTGCTGG+TGG - tig0024503:27522-27541 Msa1417690:intron 50.0%
GTTATGGTTGACTGCTGGTG+GGG - tig0024503:27524-27543 Msa1417690:intron 50.0%
!! GCTCTCTTGCTGATTCAGTC+TGG - tig0024503:27673-27692 Msa1417690:CDS 50.0%
TCCGCAATCCAATGGGGTAA+TGG + tig0024503:27789-27808 None:intergenic 50.0%
CCCCATTGGATTGCGGAAAT+TGG - tig0024503:27792-27811 Msa1417690:intron 50.0%
GAGGAAACCATGTCTCCTCT+CGG + tig0024503:28232-28251 None:intergenic 50.0%
! GAAGTTGGACTAGGTCCATG+TGG - tig0024503:28379-28398 Msa1417690:intron 50.0%
! GGGTATCTTAGCTCTCCACA+TGG + tig0024503:28397-28416 None:intergenic 50.0%
CCATGCTTCACAGGACAAGA+TGG + tig0024503:28418-28437 None:intergenic 50.0%
CCATCTTGTCCTGTGAAGCA+TGG - tig0024503:28415-28434 Msa1417690:intron 50.0%
CTTGTCCTGTGAAGCATGGT+TGG - tig0024503:28419-28438 Msa1417690:intron 50.0%
!! TCCTGGTATTGGTGAGTTCC+AGG - tig0024503:28447-28466 Msa1417690:intron 50.0%
ACCTGGAACTCACCAATACC+AGG + tig0024503:28451-28470 None:intergenic 50.0%
! GGCACACTATTTGGGCTAGA+GGG - tig0024503:29067-29086 Msa1417690:intron 50.0%
GCTAGAGGGCCAGATAATGT+GGG - tig0024503:29081-29100 Msa1417690:intron 50.0%
! ACGGGTTTCTTTTGCGATGG+GGG - tig0024503:29129-29148 Msa1417690:intron 50.0%
TGCGATGGGGGTGATTATGA+TGG - tig0024503:29141-29160 Msa1417690:CDS 50.0%
GAGGATAGGCCAATTGCTAG+AGG - tig0024503:29530-29549 Msa1417690:intron 50.0%
CTTCCTCTGCCTCTAGCAAT+TGG + tig0024503:29542-29561 None:intergenic 50.0%
ATATAGCCTACCCCACCTAG+TGG - tig0024503:29664-29683 Msa1417690:intron 50.0%
TATAGCCTACCCCACCTAGT+GGG - tig0024503:29665-29684 Msa1417690:intron 50.0%
ACAGACTGCACAACAGCACA+AGG + tig0024503:30220-30239 None:intergenic 50.0%
CATGCTGCTGAATTAGCTGC+CGG - tig0024503:30304-30323 Msa1417690:CDS 50.0%
GCATAGCCATCACGATTGCA+TGG + tig0024503:30340-30359 None:intergenic 50.0%
AATCGCTCGGGATCAGCAAA+TGG + tig0024503:30457-30476 None:intergenic 50.0%
! CTGATCCCGAGCGATTAGTT+TGG - tig0024503:30461-30480 Msa1417690:five_prime_UTR 50.0%
! ATACCCCAACCGCTTTGTTG+GGG + tig0024503:31336-31355 None:intergenic 50.0%
GAATACCCCAACCGCTTTGT+TGG + tig0024503:31338-31357 None:intergenic 50.0%
CATGCGATTCTCACGAGGGT+AGG + tig0024503:24118-24137 None:intergenic 55.0%
ATATGACGGCGGCGAGAAAG+AGG + tig0024503:24174-24193 None:intergenic 55.0%
AGGAGGATTGAGGGACGGAT+AGG + tig0024503:24215-24234 None:intergenic 55.0%
GGAGTTCAAGGACAGATCGG+CGG + tig0024503:24254-24273 None:intergenic 55.0%
! GGCGAGAGTAGTGGAGTTCA+AGG + tig0024503:24266-24285 None:intergenic 55.0%
TGAACTCCACTACTCTCGCC+GGG - tig0024503:24266-24285 Msa1417690:intron 55.0%
GAAATTCCCGGCGAGAGTAG+TGG + tig0024503:24275-24294 None:intergenic 55.0%
AGCTGATGTAGTGGTGCAGG+CGG + tig0024503:25000-25019 None:intergenic 55.0%
! AAGGCTGGTTGGAATGGGTG+AGG - tig0024503:25098-25117 Msa1417690:CDS 55.0%
!! GATTGATGGTGGGAGTGGGA+TGG - tig0024503:25221-25240 Msa1417690:intron 55.0%
GATCTTCGATTGCCTCCACC+AGG + tig0024503:25309-25328 None:intergenic 55.0%
! CAAAGCTAAGAGAGAGGCGC+CGG - tig0024503:25355-25374 Msa1417690:intron 55.0%
TCCTTGCAGTGATAGCCCTC+CGG + tig0024503:25377-25396 None:intergenic 55.0%
CTCTAGCAAGGGAAGCTGGA+TGG - tig0024503:25469-25488 Msa1417690:intron 55.0%
GGATGGGTGGTTCTTCCAGA+TGG - tig0024503:25486-25505 Msa1417690:intron 55.0%
CTAAAGCTCCCGCATTCGCA+GGG + tig0024503:25689-25708 None:intergenic 55.0%
ACTAAAGCTCCCGCATTCGC+AGG + tig0024503:25690-25709 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - tig0024503:25694-25713 Msa1417690:intron 55.0%
GGCCATAGTCCCTCCTTTCA+TGG + tig0024503:25766-25785 None:intergenic 55.0%
AGCTGGCATCTGTCCCTGTA+AGG + tig0024503:26085-26104 None:intergenic 55.0%
TTACAGGGACAGATGCCAGC+TGG - tig0024503:26084-26103 Msa1417690:intron 55.0%
! GAGGCTGTTGAGAAGGCACA+TGG + tig0024503:26143-26162 None:intergenic 55.0%
GCCTCCATCTGTTTCCCTCA+AGG - tig0024503:26158-26177 Msa1417690:intron 55.0%
CCCTTGAGGGAAACAGATGG+AGG + tig0024503:26162-26181 None:intergenic 55.0%
TCCCTCAAGGGAGTTGCTTC+TGG - tig0024503:26171-26190 Msa1417690:intron 55.0%
GCCAGAAGCAACTCCCTTGA+GGG + tig0024503:26175-26194 None:intergenic 55.0%
AGCCAGAAGCAACTCCCTTG+AGG + tig0024503:26176-26195 None:intergenic 55.0%
CTCCCCAAATGAGTCCACCT+TGG + tig0024503:26786-26805 None:intergenic 55.0%
! CAAGGTGGACTCATTTGGGG+AGG - tig0024503:26784-26803 Msa1417690:intron 55.0%
TGACTGCTGGTGGGGAATAG+TGG - tig0024503:27532-27551 Msa1417690:intron 55.0%
TTTGAGAGGTCGGACTGCTG+TGG - tig0024503:27902-27921 Msa1417690:CDS 55.0%
CAAGGATCCGAGAGGAGACA+TGG - tig0024503:28222-28241 Msa1417690:intron 55.0%
! GGGCACACTATTTGGGCTAG+AGG - tig0024503:29066-29085 Msa1417690:intron 55.0%
GGCTAGAGGGCCAGATAATG+TGG - tig0024503:29080-29099 Msa1417690:intron 55.0%
GGGATCCTGCATTGCTGCAA+AGG - tig0024503:29254-29273 Msa1417690:CDS 55.0%
AGGCCAATTGCTAGAGGCAG+AGG - tig0024503:29536-29555 Msa1417690:intron 55.0%
CTACCCCACCTAGTGGGATA+CGG - tig0024503:29671-29690 Msa1417690:intron 55.0%
AAGCCGTATCCCACTAGGTG+GGG + tig0024503:29677-29696 None:intergenic 55.0%
CAAGCCGTATCCCACTAGGT+GGG + tig0024503:29678-29697 None:intergenic 55.0%
CAACCAAGCCGTATCCCACT+AGG + tig0024503:29682-29701 None:intergenic 55.0%
TCGGGATCAGCAAATGGCTC+TGG + tig0024503:30451-30470 None:intergenic 55.0%
TTGAATGCCGGGTGGGATGT+TGG - tig0024503:30681-30700 Msa1417690:intron 55.0%
!! TCAGAAGTGGACTGAGCCTC+AGG + tig0024503:30827-30846 None:intergenic 55.0%
GAGGCTCAGTCCACTTCTGA+TGG - tig0024503:30827-30846 Msa1417690:intron 55.0%
AGTTCCCCCAACAAAGCGGT+TGG - tig0024503:31328-31347 Msa1417690:five_prime_UTR 55.0%
GTTCCCCCAACAAAGCGGTT+GGG - tig0024503:31329-31348 Msa1417690:five_prime_UTR 55.0%
TTCCCCCAACAAAGCGGTTG+GGG - tig0024503:31330-31349 Msa1417690:five_prime_UTR 55.0%
! TACCCCAACCGCTTTGTTGG+GGG + tig0024503:31335-31354 None:intergenic 55.0%
TCTCGCTCGTGTCGTGTGTG+CGG + tig0024503:24093-24112 None:intergenic 60.0%
TCTCGCCGCCGTCATATCAC+CGG - tig0024503:24177-24196 Msa1417690:three_prime_UTR 60.0%
! AGGGACGGATAGGTTGACGG+CGG + tig0024503:24205-24224 None:intergenic 60.0%
CCGTCGTGCACCGAAATTCC+CGG + tig0024503:24287-24306 None:intergenic 60.0%
! CCGGGAATTTCGGTGCACGA+CGG - tig0024503:24284-24303 Msa1417690:intron 60.0%
! TTCGGTGCACGACGGATCGA+CGG - tig0024503:24292-24311 Msa1417690:intron 60.0%
AGTGGGATGGGAACTGGAGC+CGG - tig0024503:25234-25253 Msa1417690:intron 60.0%
GAACTGGAGCCGGTGACAAC+AGG - tig0024503:25244-25263 Msa1417690:intron 60.0%
CAAGAGCAAGCAGGCACTCC+TGG - tig0024503:25288-25307 Msa1417690:intron 60.0%
GCTGCTCTAGCAAGGGAAGC+TGG - tig0024503:25465-25484 Msa1417690:intron 60.0%
AGCAAGGGAAGCTGGATGGG+TGG - tig0024503:25473-25492 Msa1417690:intron 60.0%
TGGGAAGGGGTCCCACCATT+TGG + tig0024503:25664-25683 None:intergenic 60.0%
CATTCGCAGGGTCTGGGAAG+GGG + tig0024503:25677-25696 None:intergenic 60.0%
GCATTCGCAGGGTCTGGGAA+GGG + tig0024503:25678-25697 None:intergenic 60.0%
CTTCCCAGACCCTGCGAATG+CGG - tig0024503:25677-25696 Msa1417690:intron 60.0%
TTCCCAGACCCTGCGAATGC+GGG - tig0024503:25678-25697 Msa1417690:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - tig0024503:25695-25714 Msa1417690:intron 60.0%
! TCCTGAGCTGGTGACGACCA+AGG - tig0024503:26766-26785 Msa1417690:intron 60.0%
ACCTTGGTCGTCACCAGCTC+AGG + tig0024503:26770-26789 None:intergenic 60.0%
! TGAGCTGGTGACGACCAAGG+TGG - tig0024503:26769-26788 Msa1417690:intron 60.0%
CTGCTGGTGGGGAATAGTGG+AGG - tig0024503:27535-27554 Msa1417690:intron 60.0%
! GGTGGTTTGGACATGTGGGG+AGG - tig0024503:29468-29487 Msa1417690:intron 60.0%
CGTATCCCACTAGGTGGGGT+AGG + tig0024503:29673-29692 None:intergenic 60.0%
CCAAGCCGTATCCCACTAGG+TGG + tig0024503:29679-29698 None:intergenic 60.0%
CCACCTAGTGGGATACGGCT+TGG - tig0024503:29676-29695 Msa1417690:intron 60.0%
!! TGCAGGTGTTGAATGCCGGG+TGG - tig0024503:30673-30692 Msa1417690:intron 60.0%
!! GCAGGTGTTGAATGCCGGGT+GGG - tig0024503:30674-30693 Msa1417690:intron 60.0%
GGGTAGTCCAACATCCCACC+CGG + tig0024503:30691-30710 None:intergenic 60.0%
TCGCTCGTGTCGTGTGTGCG+GGG + tig0024503:24091-24110 None:intergenic 65.0%
CTCGCTCGTGTCGTGTGTGC+GGG + tig0024503:24092-24111 None:intergenic 65.0%
CTTCACTCGCACGCTCGCTC+CGG - tig0024503:24138-24157 Msa1417690:three_prime_UTR 65.0%
CGGCTCCGGTGATATGACGG+CGG + tig0024503:24185-24204 None:intergenic 65.0%
CGGCGGCTCCGGTGATATGA+CGG + tig0024503:24188-24207 None:intergenic 65.0%
! GGATAGGTTGACGGCGGCTC+CGG + tig0024503:24199-24218 None:intergenic 65.0%
TCGGTGCACGACGGATCGAC+GGG - tig0024503:24293-24312 Msa1417690:intron 65.0%
GGTGGGAGTGGGATGGGAAC+TGG - tig0024503:25228-25247 Msa1417690:intron 65.0%
GAGCAAGCAGGCACTCCTGG+TGG - tig0024503:25291-25310 Msa1417690:intron 65.0%
CAAGCAGGCACTCCTGGTGG+AGG - tig0024503:25294-25313 Msa1417690:intron 65.0%
!! AGCTAAGAGAGAGGCGCCGG+AGG - tig0024503:25358-25377 Msa1417690:intron 65.0%
!! GCTAAGAGAGAGGCGCCGGA+GGG - tig0024503:25359-25378 Msa1417690:intron 65.0%
GCCGGAGGGCTATCACTGCA+AGG - tig0024503:25373-25392 Msa1417690:intron 65.0%
CGCATTCGCAGGGTCTGGGA+AGG + tig0024503:25679-25698 None:intergenic 65.0%
CTCCCGCATTCGCAGGGTCT+GGG + tig0024503:25683-25702 None:intergenic 65.0%
CAGGGACAGATGCCAGCTGG+TGG - tig0024503:26087-26106 Msa1417690:intron 65.0%
GAGAGGTCGGACTGCTGTGG+AGG - tig0024503:27905-27924 Msa1417690:CDS 65.0%
CGGTGCACGACGGATCGACG+GGG - tig0024503:24294-24313 Msa1417690:intron 70.0%
GGATCTTGGCAGGGCTGCGC+AGG - tig0024503:25394-25413 Msa1417690:intron 70.0%
TTGGCAGGGCTGCGCAGGCA+TGG - tig0024503:25399-25418 Msa1417690:intron 70.0%
GCTCCCGCATTCGCAGGGTC+TGG + tig0024503:25684-25703 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024503 gene 24050 31455 24050 ID=Msa1417690;Name=Msa1417690
tig0024503 mRNA 24050 31455 24050 ID=Msa1417690-mRNA-1;Parent=Msa1417690;Name=Msa1417690-mRNA-1;_AED=0.14;_eAED=0.14;_QI=512|1|1|1|0.9|0.81|11|166|702
tig0024503 exon 24050 24244 24050 ID=Msa1417690-mRNA-1:exon:23630;Parent=Msa1417690-mRNA-1
tig0024503 exon 24608 24827 24608 ID=Msa1417690-mRNA-1:exon:23629;Parent=Msa1417690-mRNA-1
tig0024503 exon 25019 25237 25019 ID=Msa1417690-mRNA-1:exon:23628;Parent=Msa1417690-mRNA-1
tig0024503 exon 26230 26490 26230 ID=Msa1417690-mRNA-1:exon:23627;Parent=Msa1417690-mRNA-1
tig0024503 exon 27037 27201 27037 ID=Msa1417690-mRNA-1:exon:23626;Parent=Msa1417690-mRNA-1
tig0024503 exon 27579 27773 27579 ID=Msa1417690-mRNA-1:exon:23625;Parent=Msa1417690-mRNA-1
tig0024503 exon 27868 28071 27868 ID=Msa1417690-mRNA-1:exon:23624;Parent=Msa1417690-mRNA-1
tig0024503 exon 28289 28366 28289 ID=Msa1417690-mRNA-1:exon:23623;Parent=Msa1417690-mRNA-1
tig0024503 exon 29131 29415 29131 ID=Msa1417690-mRNA-1:exon:23622;Parent=Msa1417690-mRNA-1
tig0024503 exon 29972 30634 29972 ID=Msa1417690-mRNA-1:exon:23621;Parent=Msa1417690-mRNA-1
tig0024503 exon 31154 31455 31154 ID=Msa1417690-mRNA-1:exon:23620;Parent=Msa1417690-mRNA-1
tig0024503 five_prime_UTR 31154 31455 31154 ID=Msa1417690-mRNA-1:five_prime_utr;Parent=Msa1417690-mRNA-1
tig0024503 five_prime_UTR 30425 30634 30425 ID=Msa1417690-mRNA-1:five_prime_utr;Parent=Msa1417690-mRNA-1
tig0024503 CDS 29972 30424 29972 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 29131 29415 29131 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 28289 28366 28289 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 27868 28071 27868 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 27579 27773 27579 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 27037 27201 27037 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 26230 26490 26230 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 25019 25237 25019 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 24608 24827 24608 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 CDS 24216 24244 24216 ID=Msa1417690-mRNA-1:cds;Parent=Msa1417690-mRNA-1
tig0024503 three_prime_UTR 24050 24215 24050 ID=Msa1417690-mRNA-1:three_prime_utr;Parent=Msa1417690-mRNA-1
Gene Sequence

>Msa1417690

ATGGCAACTGATATGCAAAGGCTGGTTGGAATGGGTGAGGATGATGAAGAATTGGGAATGGGTATGAAAGACGAAGACGATGAGGATGCCGATTACGACGAAAATGGAGGTGAGCATGGAAATGTTTCGGGGATGGTAGAGATTGATGGTGGGAGTGGGATGGGAACTGGAGCCGGTGACAACAGGTTTCAGCAACACCACGAGTTTCAAGAGCAAGCAGGCACTCCTGGTGGAGGCAATCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATCTTGGCAGGGCTGCGCAGGCATGGCAATTATAATCTTAGAGTTAGGGCTGACATTAATGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGAACTACTTTTCCTTCAAAATCTCAGGGACAGATGCCAGCTGGTGGTAATTCTGCAGTTGTTACTTCATCATCATCCCATGTGCCTTCTCAACAGCCTCCATCTGTTTCCCTCAAGGGAGTTGCTTCTGGCTATGGGAGCCCTTTAGACTATAATGCTTGTCCAATGAAAGATGTTTTCATACCATCTCCATCTCCATATGATCTGTCCTCAACTTCCCGATCTCAAACATCTATGGTGGGGGATGGGGAAGCGCAAAGAGACAATCCTCCCTTGATTGATGGTTCAATAGATACCATTAGTGAGAAGCAGATTGCTGACATTCCCCCCAGATTACCAGAACGTGATTTTGCTGGGAGCCCATATGTTCCTGTTTATGTGATGCTACCGTTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTATACTAAAGCAGCTGAGGGTATTGAAATCAGCAAATGTTGATGGTGTTATGGTTGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCTCAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGTTGCAGGTTGTCATGTCTTTTCACGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGATTGCGGAAATTGGTAGGAGCAATCCAGATATTTTTTTCACTGATAGAGAGGGAAGACACAACCCTGAATGTCTTTCCTGGGGAATAGATAAGGAACGTGTTTTGAGAGGTCGGACTGCTGTGGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGATAGAGTTTAATGAGTATTTTGAGGATGGCTTCATCTCCATGATTGAAGTTGGACTAGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTGAAGCATGGTTGGAGATATCCTGGTATTGGTGAGTTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGAAAAGCAGCAGAAGAAAGAGGGCACACTATTTGGGCTAGAGGGCCAGATAATGTGGGTACCTACAATTCTCAGCCACACGAAACGGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTCAACTGGTACTCTCAGGCTTTAGTTGATCATGGAAACCGGGTACTTTCAATGGCAAAATTAGCTTTTGAGGGATCCTGCATTGCTGCAAAGATATCAGGTATTTATTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAGCTGCCGGATATTATAATCCATGCAATCGTGATGGCTATGCTGCAATCACAGCAATGTTAAAGAGAAACGGTGTTAACTTAAACATTGCCTGTGTTGATTTGCACACATTCAATCAACACGAGAGCTTTCCAGAGCCATTTGCTGATCCCGAGCGATTAGTTTGGCAAGTGTTGAATGCCGGGTGGGATGTTGGACTACCCGTCGTTAGTGAGAATGCACTTCCTTGCCTAAACAGAGTTAGCTATAACAAGGTTTTGGATAATACCAAGCCCATTAATGATCCAGATGGAAGGCACTTTTCATCCTTTACATACCTGAGGCTCAGTCCACTTCTGATGGAACGACCAAACTTCATAGAGTTTGAACGATTTGTCAAGAGGATGCACGGAGAAGCTGTTCTTGATCTTCAGGTATAA
Protein sequence

>Msa1417690

MATDMQRLVGMGEDDEELGMGMKDEDDEDADYDENGGEHGNVSGMVEIDGGSGMGTGAGDNRFQQHHEFQEQAGTPGGGNRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGQMPAGGNSAVVTSSSSHVPSQQPPSVSLKGVASGYGSPLDYNACPMKDVFIPSPSPYDLSSTSRSQTSMVGDGEAQRDNPPLIDGSIDTISEKQIADIPPRLPERDFAGSPYVPVYVMLPLGVINIKCELVDPDGILKQLRVLKSANVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPLPHWIAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRIEFNEYFEDGFISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEERGHTIWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQALVDHGNRVLSMAKLAFEGSCIAAKISGIYWWYKTASHAAELAAGYYNPCNRDGYAAITAMLKRNGVNLNIACVDLHTFNQHESFPEPFADPERLVWQVLNAGWDVGLPVVSENALPCLNRVSYNKVLDNTKPINDPDGRHFSSFTYLRLSPLLMERPNFIEFERFVKRMHGEAVLDLQV*