AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1427380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427380 MtrunA17_Chr4g0062881 93.217 457 31 0 315 771 1 457 0.0 874
Msa1427380 MtrunA17_Chr1g0171711 38.308 804 406 22 30 771 11 786 1.93e-144 443
Msa1427380 MtrunA17_Chr1g0148791 50.472 424 174 9 383 771 480 902 4.12e-120 382
Msa1427380 MtrunA17_Chr1g0148791 37.344 241 134 7 150 383 182 412 6.23e-29 124
Msa1427380 MtrunA17_Chr1g0148791 43.590 78 43 1 30 106 11 88 3.18e-14 77.0
Msa1427380 MtrunA17_Chr4g0062891 83.254 209 29 1 18 220 3 211 3.30e-118 354
Msa1427380 MtrunA17_Chr3g0138311 49.061 426 175 10 383 771 477 897 7.77e-118 377
Msa1427380 MtrunA17_Chr3g0138311 36.100 241 140 7 150 383 171 404 9.23e-29 123
Msa1427380 MtrunA17_Chr7g0237271 33.458 801 441 25 30 771 17 784 8.09e-116 368
Msa1427380 MtrunA17_Chr7g0237241 33.459 795 438 26 31 771 18 775 5.70e-114 363
Msa1427380 MtrunA17_Chr2g0282401 41.275 298 164 6 479 771 497 788 5.60e-65 231
Msa1427380 MtrunA17_Chr4g0047051 35.889 287 177 6 489 771 25 308 4.93e-47 169
Msa1427380 MtrunA17_Chr4g0047091 35.417 288 175 8 490 771 84 366 1.09e-40 153
Msa1427380 MtrunA17_Chr4g0047071 33.333 285 172 8 500 771 3 282 1.11e-36 139
Msa1427380 MtrunA17_Chr4g0047061 35.887 248 146 8 530 771 90 330 2.00e-35 137
Msa1427380 MtrunA17_Chr4g0047101 37.118 229 120 8 500 720 32 244 2.77e-31 123
Msa1427380 MtrunA17_Chr3g0093681 28.369 282 184 9 500 770 278 552 7.40e-22 100
Msa1427380 MtrunA17_Chr5g0405851 29.470 302 178 12 496 770 156 449 7.57e-22 99.8
Msa1427380 MtrunA17_Chr1g0172501 28.369 282 184 9 500 770 278 552 2.19e-21 99.0
Msa1427380 MtrunA17_Chr6g0448921 26.613 248 172 6 491 732 13 256 5.20e-18 89.0
Msa1427380 MtrunA17_Chr4g0047111 32.886 149 71 5 575 720 5 127 4.60e-17 79.0
Msa1427380 MtrunA17_Chr3g0136971 28.899 218 141 7 494 705 419 628 9.18e-17 84.7
Msa1427380 MtrunA17_Chr1g0185501 23.427 286 204 10 497 770 30 312 1.75e-14 75.5
Msa1427380 MtrunA17_Chr2g0281451 23.715 253 183 6 486 732 7 255 5.12e-13 73.2
Msa1427380 MtrunA17_Chr2g0281451 25.131 191 137 4 500 686 106 294 2.49e-11 67.8
Msa1427380 MtrunA17_Chr4g0067151 25.764 229 152 7 524 737 15 240 5.62e-13 70.9
Msa1427380 MtrunA17_Chr4g0067151 27.136 199 131 6 502 689 86 281 1.02e-12 70.1
Msa1427380 MtrunA17_Chr4g0067151 25.980 204 139 6 494 686 120 322 7.43e-12 67.4
Msa1427380 MtrunA17_Chr8g0392701 26.829 246 158 11 508 738 30 268 4.23e-12 68.2
Msa1427380 MtrunA17_Chr2g0308391 22.443 352 230 12 453 771 91 432 5.85e-12 68.6
Msa1427380 MtrunA17_Chr4g0035611 22.183 284 181 10 497 745 54 332 2.91e-11 67.4
Msa1427380 MtrunA17_Chr1g0168391 24.865 185 131 5 508 685 238 421 3.51e-11 66.6
Msa1427380 MtrunA17_Chr2g0295791 23.551 276 195 8 509 771 185 457 8.33e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427380 AT2G32700.6 36.443 804 420 25 30 771 11 785 1.07e-130 407
Msa1427380 AT2G32700.2 36.352 806 420 26 30 771 11 787 6.13e-129 403
Msa1427380 AT2G32700.5 36.352 806 420 26 30 771 11 787 6.13e-129 403
Msa1427380 AT2G32700.1 36.352 806 420 26 30 771 11 787 6.13e-129 403
Msa1427380 AT2G32700.4 36.352 806 420 26 30 771 11 787 6.13e-129 403
Msa1427380 AT2G32700.3 36.352 806 420 26 30 771 11 787 6.13e-129 403
Msa1427380 AT2G32700.7 36.064 818 425 26 30 771 11 806 7.25e-129 403
Msa1427380 AT4G32551.1 49.517 414 180 7 386 771 519 931 1.74e-122 390
Msa1427380 AT4G32551.1 36.111 252 147 8 134 379 195 438 4.26e-29 125
Msa1427380 AT4G32551.1 44.872 78 42 1 30 106 11 88 7.98e-15 79.3
Msa1427380 AT4G32551.2 49.517 414 180 7 386 771 557 969 5.48e-122 390
Msa1427380 AT4G32551.2 31.724 290 146 9 134 379 195 476 5.38e-24 108
Msa1427380 AT4G32551.2 44.872 78 42 1 30 106 11 88 8.15e-15 79.3
Msa1427380 AT2G41500.1 29.787 282 180 9 500 770 261 535 3.51e-22 102
Msa1427380 AT2G41500.2 29.787 282 180 9 500 770 261 535 3.51e-22 102
Msa1427380 AT1G61210.3 25.869 259 179 7 480 732 4 255 6.22e-18 89.4
Msa1427380 AT1G61210.1 25.869 259 179 7 480 732 4 255 7.52e-18 89.4
Msa1427380 AT1G61210.2 25.869 259 179 7 480 732 4 255 8.05e-18 89.0
Msa1427380 AT5G25150.1 29.091 220 144 5 491 705 415 627 2.22e-17 87.0
Msa1427380 AT5G25150.2 29.091 220 144 5 491 705 415 627 2.62e-17 87.0
Msa1427380 AT5G23430.3 27.490 251 166 7 491 732 13 256 3.30e-17 87.0
Msa1427380 AT5G23430.2 27.490 251 166 7 491 732 13 256 3.30e-17 87.0
Msa1427380 AT5G23430.1 27.490 251 166 7 491 732 13 256 3.34e-17 87.0
Msa1427380 AT5G08390.1 26.693 251 168 7 491 732 13 256 1.67e-16 84.7
Msa1427380 AT3G49660.1 24.658 292 196 12 497 770 27 312 1.09e-15 79.3
Msa1427380 AT3G49660.1 24.125 257 175 9 531 771 19 271 1.87e-13 72.8
Msa1427380 AT1G11160.1 23.552 259 185 7 480 732 4 255 6.35e-15 79.7
Msa1427380 AT1G11160.1 25.521 192 137 4 499 686 105 294 6.99e-12 69.7
Msa1427380 AT1G11160.4 23.552 259 185 7 480 732 4 255 7.03e-15 79.3
Msa1427380 AT1G11160.4 25.654 191 136 4 499 685 105 293 7.17e-12 69.7
Msa1427380 AT1G11160.2 23.552 259 185 7 480 732 4 255 7.28e-15 79.3
Msa1427380 AT1G11160.2 25.521 192 137 4 499 686 105 294 7.23e-12 69.7
Msa1427380 AT5G60940.1 24.262 305 197 11 497 771 126 426 2.80e-14 76.3
Msa1427380 AT4G02730.1 23.529 289 203 9 497 771 46 330 3.67e-14 75.1
Msa1427380 AT5G60940.2 24.262 305 197 11 497 771 34 334 7.64e-14 73.9
Msa1427380 AT5G13480.3 23.297 279 199 9 502 770 119 392 1.95e-13 74.3
Msa1427380 AT5G13480.1 23.297 279 199 9 502 770 131 404 2.00e-13 74.3
Msa1427380 AT5G13480.4 23.297 279 199 9 502 770 119 392 2.00e-13 74.3
Msa1427380 AT5G13480.2 23.297 279 199 9 502 770 142 415 2.50e-13 73.9
Msa1427380 AT2G33340.3 25.668 187 129 4 508 685 236 421 1.58e-12 71.2
Msa1427380 AT2G33340.2 25.668 187 129 4 508 685 236 421 1.63e-12 71.2
Msa1427380 AT2G33340.1 25.668 187 129 4 508 685 236 421 1.63e-12 71.2
Msa1427380 AT1G11160.3 25.789 190 135 4 501 686 65 252 7.42e-12 69.7
Msa1427380 AT5G08560.1 23.904 251 175 8 532 770 270 516 1.02e-11 68.9
Msa1427380 AT5G08560.1 25.000 292 198 13 494 770 274 559 6.23e-11 66.2
Msa1427380 AT5G08560.2 23.904 251 175 8 532 770 270 516 1.02e-11 68.9
Msa1427380 AT5G08560.2 25.000 292 198 13 494 770 274 559 6.23e-11 66.2
Msa1427380 AT5G08560.3 23.904 251 175 8 532 770 270 516 1.02e-11 68.9
Msa1427380 AT5G08560.3 25.000 292 198 13 494 770 274 559 6.23e-11 66.2
Msa1427380 AT5G67320.1 27.778 162 104 4 496 645 450 610 5.90e-11 66.2
Msa1427380 AT2G43770.1 20.280 286 204 11 502 769 61 340 7.56e-11 65.1

Find 191 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTCTTCGGACATTTAC+AGG 0.170744 tig0026186:+53928 Msa1427380:CDS
GCTCTTCAAGCGTAGATTTC+AGG 0.213054 tig0026186:-53057 None:intergenic
CACCATAGGAGCATTGTTTA+TGG 0.233609 tig0026186:-49056 None:intergenic
CTTCCGGTCAACTTGACTTT+TGG 0.234717 tig0026186:-51986 None:intergenic
CCTGCTCAGCTGCAGCAATA+TGG 0.235792 tig0026186:+48992 Msa1427380:CDS
AGTACCATGAACACTGTAAA+TGG 0.257174 tig0026186:-49728 None:intergenic
TATTTGTTCTTGTGATAATA+AGG 0.266795 tig0026186:+53999 Msa1427380:CDS
AAGTCCAGATGAGGCAATTC+AGG 0.270725 tig0026186:-51806 None:intergenic
TCAGTGTGCTGGCACTCTTC+TGG 0.277434 tig0026186:+54611 Msa1427380:CDS
GCGATTTCATACGCTTTATC+AGG 0.280157 tig0026186:-47309 None:intergenic
GAACAAATGTAATACCTTAA+AGG 0.280380 tig0026186:-49173 None:intergenic
GCTTGTCCATAATCAAAATA+TGG 0.283609 tig0026186:+51706 Msa1427380:CDS
TTGTGCAGGTGTTACAATAT+TGG 0.283850 tig0026186:-51774 None:intergenic
TGTGCAGGTGTTACAATATT+GGG 0.283894 tig0026186:-51773 None:intergenic
GCACTTGCTGTTGATAATAT+AGG 0.286469 tig0026186:+55041 Msa1427380:three_prime_UTR
CTGCTCAGCTGCAGCAATAT+GGG 0.293474 tig0026186:+48993 Msa1427380:CDS
CCATATTGCTGCAGCTGAGC+AGG 0.294656 tig0026186:-48992 None:intergenic
AAGCAGTAAATGGCATGTTT+TGG 0.303297 tig0026186:+55153 Msa1427380:three_prime_UTR
GATGGAAAACTATTTGTTAC+TGG 0.314915 tig0026186:+52862 Msa1427380:CDS
TACTGGTGGTCGTGATAAAA+AGG 0.316571 tig0026186:+52879 Msa1427380:CDS
TTGCAAATGGTAGTTGTATT+GGG 0.320162 tig0026186:+54040 Msa1427380:CDS
TTTCCCTGAATTGCCTCATC+TGG 0.320474 tig0026186:+51802 Msa1427380:CDS
CAGGTTGAAGACTCCCCTTC+AGG 0.322856 tig0026186:+49129 Msa1427380:CDS
GAAACTGTGTACGAAGAAAA+AGG 0.327950 tig0026186:-47368 None:intergenic
ATAACTGGTGGACAGCCTTC+AGG 0.329589 tig0026186:+49352 Msa1427380:CDS
TGTTATTTGGCAGGCTCATA+TGG 0.330746 tig0026186:+52528 Msa1427380:intron
ATTGCAAATGGTAGTTGTAT+TGG 0.340157 tig0026186:+54039 Msa1427380:CDS
CTCCTATGGTGAGGCAGAAC+CGG 0.346361 tig0026186:+49068 Msa1427380:CDS
ATTGTAACACCTGCACAAAT+TGG 0.348653 tig0026186:+51779 Msa1427380:CDS
TAATTCAGTCGCTTATGCTC+TGG 0.350259 tig0026186:+54886 Msa1427380:intron
GTGAGATTTCAACCTGGTTT+GGG 0.350453 tig0026186:+54179 Msa1427380:CDS
CAAATAAGGCCACGTTTACT+TGG 0.352863 tig0026186:-53982 None:intergenic
TCTCAAGAGCAACGGATCTT+TGG 0.353331 tig0026186:+52555 Msa1427380:CDS
TATTATCACAAGAACAAATA+AGG 0.354896 tig0026186:-53996 None:intergenic
GCACTCTTCTGGAAATTATC+TGG 0.356961 tig0026186:+54622 Msa1427380:CDS
GTTCAGACTTGCTCATATAT+AGG 0.360394 tig0026186:+55119 Msa1427380:three_prime_UTR
CTTATGCTACAAGCAGTAAA+TGG 0.360839 tig0026186:+55143 Msa1427380:three_prime_UTR
CCGATAAAACTGTAAAGGTT+TGG 0.363852 tig0026186:+53143 Msa1427380:CDS
GGTGAGATTTCAACCTGGTT+TGG 0.364221 tig0026186:+54178 Msa1427380:CDS
GAAGGCTGTCCACCAGTTAT+TGG 0.366035 tig0026186:-49349 None:intergenic
TTTATCAGGTTCATCGCATT+TGG 0.370622 tig0026186:-47295 None:intergenic
GGCAATGTTGAACAGAATAT+TGG 0.370914 tig0026186:+48031 Msa1427380:CDS
CTTGGTCAACTCGTCCATTA+TGG 0.371045 tig0026186:-52618 None:intergenic
AATCAAAACCAGCAACTTCC+AGG 0.378139 tig0026186:+49545 Msa1427380:CDS
CTTGTAACCCTGGAAGTTGC+TGG 0.378969 tig0026186:-49553 None:intergenic
AACACAATGGGATCATCTTC+TGG 0.380898 tig0026186:+52063 Msa1427380:CDS
ACCATAGGAGCATTGTTTAT+GGG 0.382702 tig0026186:-49055 None:intergenic
ATATAGGTTTACATTCCTTC+AGG 0.387241 tig0026186:+55057 Msa1427380:three_prime_UTR
ACGGCAGCAACTTATGTTTC+AGG 0.387564 tig0026186:+51625 Msa1427380:CDS
CATATTGCTGCAGCTGAGCA+GGG 0.392189 tig0026186:-48991 None:intergenic
CGATAAAACTGTAAAGGTTT+GGG 0.397292 tig0026186:+53144 Msa1427380:CDS
TGCAGGCTGGTCATTCTCTT+CGG 0.397318 tig0026186:+53917 Msa1427380:intron
GTTTGCAGTTCCAGAGCTAT+TGG 0.397684 tig0026186:-52043 None:intergenic
ACCAGCATTATCTTACCTTA+AGG 0.398546 tig0026186:+48251 Msa1427380:CDS
AAGGTTGGTTGATACCTTAT+GGG 0.400769 tig0026186:-51837 None:intergenic
GGATCCATTTACAGTGTTCA+TGG 0.401695 tig0026186:+49724 Msa1427380:CDS
ACTTGGCAACAGAATGGTTT+CGG 0.403735 tig0026186:+52123 Msa1427380:CDS
CCATCAAAACCACTGACAAA+TGG 0.409375 tig0026186:-51668 None:intergenic
CAGGGCTCTGCAATATGAAC+TGG 0.414323 tig0026186:-48973 None:intergenic
GGCATCTGTTTGTAATGATC+TGG 0.417806 tig0026186:+54643 Msa1427380:CDS
AGCCAAAATCTTACTGCTAA+AGG 0.419763 tig0026186:-50696 None:intergenic
GAGTTGCAGATTTAAATTGC+AGG 0.422031 tig0026186:+54259 Msa1427380:CDS
CTGCCGTGGTGAAAATTGAT+TGG 0.433947 tig0026186:-51609 None:intergenic
AACGAAATAGCACCAATAAC+TGG 0.436676 tig0026186:+49337 Msa1427380:CDS
CTTGCTGATTCAGACCATAA+TGG 0.437173 tig0026186:+52604 Msa1427380:CDS
ATGATAGGACTTTCAAGATC+TGG 0.438220 tig0026186:+55009 Msa1427380:CDS
AATTCAGTCGCTTATGCTCT+GGG 0.438597 tig0026186:+54887 Msa1427380:intron
TTTACAAGAGAAACTTCAAC+AGG 0.441555 tig0026186:+49517 Msa1427380:CDS
ATAATAAGGAGATAAGATAT+TGG 0.444385 tig0026186:+54013 Msa1427380:CDS
ATGAGATTCAGGCTTCTCTA+TGG 0.444675 tig0026186:+53017 Msa1427380:intron
CTCTGGGCCATTGGATCTGA+TGG 0.445049 tig0026186:+54671 Msa1427380:CDS
CCATTGGATCTGATGGCAGC+GGG 0.448766 tig0026186:+54678 Msa1427380:CDS
GCTTATGCTCTGGGACTTTG+AGG 0.454130 tig0026186:+54896 Msa1427380:CDS
TGCTCAGCTGCAGCAATATG+GGG 0.454725 tig0026186:+48994 Msa1427380:CDS
TTGGCAGTATCAGATGTTAC+TGG 0.456091 tig0026186:+54966 Msa1427380:CDS
TAATGATCTGGTTAAACTCT+GGG 0.456770 tig0026186:+54655 Msa1427380:CDS
TCCCATAAACAATGCTCCTA+TGG 0.458377 tig0026186:+49054 Msa1427380:CDS
GCCTTGTTCGTTCAGTGTGC+TGG 0.458741 tig0026186:+54600 Msa1427380:CDS
TAACTGGTGGACAGCCTTCA+GGG 0.459341 tig0026186:+49353 Msa1427380:CDS
AACAAGGCACAATCCTCGTT+TGG 0.460063 tig0026186:-49310 None:intergenic
CTGGTTAAACTCTGGGCCAT+TGG 0.460194 tig0026186:+54662 Msa1427380:CDS
GTAATGATCTGGTTAAACTC+TGG 0.461731 tig0026186:+54654 Msa1427380:CDS
TGCACTCATGCCACTGTGCA+TGG 0.464962 tig0026186:-49671 None:intergenic
TGATTATGGACAAGCAAACT+TGG 0.465215 tig0026186:-51698 None:intergenic
AACCACCTACAGAATTTGAT+TGG 0.466272 tig0026186:-51745 None:intergenic
ATAATCAAAATATGGTTCCT+TGG 0.467781 tig0026186:+51714 Msa1427380:CDS
TCAGGTCTTGCCAATAGCTC+TGG 0.469604 tig0026186:+52033 Msa1427380:CDS
CGAAAAGTAGGATCAAGTTC+AGG 0.470472 tig0026186:+52015 Msa1427380:CDS
TCAAAATATTGTAGCTAGGA+TGG 0.471613 tig0026186:-54754 None:intergenic
TGCAGACACGACTGCCAACT+TGG 0.472292 tig0026186:+52106 Msa1427380:CDS
TTCTGTTTGCAGACAAACAT+TGG 0.483931 tig0026186:+49478 Msa1427380:intron
GCAAGAATATTTCATGATGA+AGG 0.484394 tig0026186:+48010 Msa1427380:CDS
ACTTATGTTTCAGGCACAGC+AGG 0.484632 tig0026186:+51634 Msa1427380:CDS
AAACCATTCTGTTGCCAAGT+TGG 0.494388 tig0026186:-52120 None:intergenic
GCCATTGGATCTGATGGCAG+CGG 0.497982 tig0026186:+54677 Msa1427380:CDS
TCCTATGGTGAGGCAGAACC+GGG 0.500407 tig0026186:+49069 Msa1427380:CDS
GAAAACCGCATTACTTACAT+TGG 0.501280 tig0026186:-55183 None:intergenic
TGCATCAACACAGAATCAAT+TGG 0.506774 tig0026186:+52152 Msa1427380:CDS
TCTGGAACTGCAAACACAAT+GGG 0.508959 tig0026186:+52051 Msa1427380:CDS
ATCAGATGTTACTGGATTGG+TGG 0.509104 tig0026186:+54974 Msa1427380:CDS
TAATGAGATCAAGCATGGAT+TGG 0.510535 tig0026186:+52801 Msa1427380:CDS
AAAAGTGTATAAAATAAAAG+TGG 0.511274 tig0026186:+55223 Msa1427380:three_prime_UTR
TGGCCTCAGTTAGTCATGAT+AGG 0.512839 tig0026186:+54994 Msa1427380:CDS
GATACAAGCTTGTCGTGTGC+AGG 0.517006 tig0026186:-54939 None:intergenic
TGTTGTCACTTCTCCTCGGA+TGG 0.520645 tig0026186:+52844 Msa1427380:CDS
TTCCTATGTTTGTTGCCTGA+AGG 0.521473 tig0026186:-55072 None:intergenic
CTGCCAACTTGGCAACAGAA+TGG 0.522284 tig0026186:+52117 Msa1427380:CDS
AGATATTGGAATATTGCAAA+TGG 0.522398 tig0026186:+54027 Msa1427380:CDS
TTGTAAAATGCTAAGTGCAC+TGG 0.525997 tig0026186:-49501 None:intergenic
CCCGCTGCCATCAGATCCAA+TGG 0.526518 tig0026186:-54678 None:intergenic
TCATTTAATGAGATCAAGCA+TGG 0.527559 tig0026186:+52796 Msa1427380:CDS
ATTTCAACCTGGTTTGGGAA+AGG 0.527606 tig0026186:+54184 Msa1427380:CDS
TAGCAACATAGAACATGCTT+GGG 0.529135 tig0026186:-53111 None:intergenic
TCAGGGAAACCAATTTGTGC+AGG 0.529698 tig0026186:-51788 None:intergenic
CAAGAGCAACGGATCTTTGG+CGG 0.529755 tig0026186:+52558 Msa1427380:CDS
GCAAGAACCTTTCCCAAACC+AGG 0.531493 tig0026186:-54191 None:intergenic
CATACAATTGATTCTTCATG+AGG 0.532585 tig0026186:-47982 None:intergenic
GTTGTTCTCTCTTCGAGTGG+TGG 0.533117 tig0026186:+48178 Msa1427380:CDS
AGTCCAGATGAGGCAATTCA+GGG 0.534232 tig0026186:-51805 None:intergenic
AAATAAAAGTGGTAAACCTC+AGG 0.534634 tig0026186:+55234 Msa1427380:three_prime_UTR
ATGATCAAAATATTGTAGCT+AGG 0.535188 tig0026186:-54758 None:intergenic
CTCAGCCGATAAAACTGTAA+AGG 0.537151 tig0026186:+53138 Msa1427380:CDS
CAGGCAACAAACATAGGAAG+TGG 0.537177 tig0026186:+55076 Msa1427380:three_prime_UTR
CATCAAAAGCATTTCCCTGA+AGG 0.539630 tig0026186:-49144 None:intergenic
GTAGCAACATAGAACATGCT+TGG 0.539825 tig0026186:-53112 None:intergenic
TGCTATTTCGTTCAACAACA+AGG 0.543891 tig0026186:-49326 None:intergenic
CCGGGTTACTTCTAATACAA+TGG 0.545781 tig0026186:+49087 Msa1427380:CDS
AATGGCAACAAAACTAAATG+AGG 0.546151 tig0026186:+49105 Msa1427380:CDS
GGACTTAGATATGACCCATA+AGG 0.547552 tig0026186:+51823 Msa1427380:CDS
CCATTGTATTAGAAGTAACC+CGG 0.548960 tig0026186:-49087 None:intergenic
CGACAAGCTTGTATCTGCAT+TGG 0.551855 tig0026186:+54947 Msa1427380:CDS
TCTCAAGCTGTTGTTTCAGA+AGG 0.560493 tig0026186:+49703 Msa1427380:CDS
TTTGATTGGCCATCGTTCCA+AGG 0.560547 tig0026186:-51731 None:intergenic
GTCTGCATAGTTGGTGTAGA+GGG 0.561086 tig0026186:-52090 None:intergenic
CTTCCAAAAGTCAAGTTGAC+CGG 0.561136 tig0026186:+51983 Msa1427380:CDS
TGACTGTTGTCACTTCTCCT+CGG 0.561258 tig0026186:+52840 Msa1427380:CDS
AGGTTGAAGACTCCCCTTCA+GGG 0.566579 tig0026186:+49130 Msa1427380:CDS
TTCCTTCAGGCAACAAACAT+AGG 0.567645 tig0026186:+55070 Msa1427380:three_prime_UTR
GGTAGCGACTTGACTCTGAA+AGG 0.568593 tig0026186:+50669 Msa1427380:CDS
GTAGCGACTTGACTCTGAAA+GGG 0.570038 tig0026186:+50670 Msa1427380:CDS
ATCAAAAGCATTTCCCTGAA+GGG 0.572579 tig0026186:-49143 None:intergenic
CTCTGGAACTGCAAACACAA+TGG 0.574440 tig0026186:+52050 Msa1427380:CDS
TTATCAGGGTGGTGTAACTC+AGG 0.575396 tig0026186:+54157 Msa1427380:intron
CTGGTTGTTCTCTCTTCGAG+TGG 0.576679 tig0026186:+48175 Msa1427380:CDS
CAACAAAACTAAATGAGGAC+AGG 0.577019 tig0026186:+49110 Msa1427380:CDS
ACCTTAAGGTAAGATAATGC+TGG 0.580228 tig0026186:-48252 None:intergenic
CGCTTGAAGAGCACACTCAA+CGG 0.586936 tig0026186:+53068 Msa1427380:CDS
TTTACGATTACTTGTAACCC+TGG 0.588248 tig0026186:-49563 None:intergenic
GAATTGTTTATGGCCAAACA+AGG 0.589606 tig0026186:+48213 Msa1427380:CDS
CTGAACGAACAAGGCTCATG+TGG 0.591408 tig0026186:-54592 None:intergenic
TTAGTTAATCCATTTGTCAG+TGG 0.592463 tig0026186:+51659 Msa1427380:CDS
AAGATCCGTTGCTCTTGAGA+TGG 0.593548 tig0026186:-52552 None:intergenic
AGTATCAGATGTTACTGGAT+TGG 0.595920 tig0026186:+54971 Msa1427380:CDS
AATATGGTTCCTTGGAACGA+TGG 0.597683 tig0026186:+51722 Msa1427380:CDS
ATTCTCTTCGGACATTTACA+GGG 0.599684 tig0026186:+53929 Msa1427380:CDS
ACCCGGTTCTGCCTCACCAT+AGG 0.601611 tig0026186:-49070 None:intergenic
GCCAGCACACTGAACGAACA+AGG 0.603185 tig0026186:-54601 None:intergenic
AGGTGTTACAATATTGGGAA+TGG 0.603227 tig0026186:-51768 None:intergenic
ATCGCATTTGGATTGAGACA+TGG 0.604361 tig0026186:-47283 None:intergenic
TCAAAAGCATTTCCCTGAAG+GGG 0.605318 tig0026186:-49142 None:intergenic
GGAAAACTATTTGTTACTGG+TGG 0.605813 tig0026186:+52865 Msa1427380:CDS
ATCAAAACCAGCAACTTCCA+GGG 0.612502 tig0026186:+49546 Msa1427380:CDS
GTTTATGGGACAGAGAACAT+TGG 0.619165 tig0026186:-49041 None:intergenic
GGCCAATCAAATTCTGTAGG+TGG 0.625840 tig0026186:+51743 Msa1427380:CDS
CCGCGGTCAGCTTCCAAACG+AGG 0.626261 tig0026186:+49297 Msa1427380:CDS
TGTCTGCATAGTTGGTGTAG+AGG 0.626946 tig0026186:-52091 None:intergenic
GATGGCCAATCAAATTCTGT+AGG 0.638312 tig0026186:+51740 Msa1427380:CDS
CATTGGATCTGATGGCAGCG+GGG 0.639120 tig0026186:+54679 Msa1427380:CDS
ATGGACCATCTCAAGAGCAA+CGG 0.642745 tig0026186:+52547 Msa1427380:CDS
AATTGATTGGAAGATTGTGA+AGG 0.646797 tig0026186:-51596 None:intergenic
GCGACTTGACTCTGAAAGGG+TGG 0.648057 tig0026186:+50673 Msa1427380:CDS
ATGATTAGTAGGCACCCTGA+AGG 0.649924 tig0026186:-49367 None:intergenic
GTCATATCTAAGTCCAGATG+AGG 0.650884 tig0026186:-51815 None:intergenic
GAAATAGCACCAATAACTGG+TGG 0.658266 tig0026186:+49340 Msa1427380:CDS
GGGATTGGATGAGCATCATG+CGG 0.660736 tig0026186:+51544 Msa1427380:intron
TAAACAATGCTCCTATGGTG+AGG 0.661726 tig0026186:+49059 Msa1427380:CDS
TGAAACATAAGTTGCTGCCG+TGG 0.662848 tig0026186:-51623 None:intergenic
CCTCGTTTGGAAGCTGACCG+CGG 0.663224 tig0026186:-49297 None:intergenic
TTTGATCATTTGCTGCAGTG+AGG 0.663983 tig0026186:+54772 Msa1427380:CDS
AAATTTAGGCTCAAGAAATG+CGG 0.670041 tig0026186:+48924 Msa1427380:intron
TATGGGGCTGAAACTCAAGA+AGG 0.670598 tig0026186:+49010 Msa1427380:CDS
ACTCAGGTGAGATTTCAACC+TGG 0.671694 tig0026186:+54173 Msa1427380:CDS
AGTCCTATCATGACTAACTG+AGG 0.678070 tig0026186:-54997 None:intergenic
CACTCGAAGAGAGAACAACC+AGG 0.686015 tig0026186:-48174 None:intergenic
GACTTTCATCCAAGTAAACG+TGG 0.686140 tig0026186:+53973 Msa1427380:CDS
GGTGTAGTTATGGATGCACC+TGG 0.690437 tig0026186:+48156 Msa1427380:intron
CATAATGGACGAGTTGACCA+AGG 0.691350 tig0026186:+52619 Msa1427380:CDS
GTGGCATGAGTGCAATGATG+AGG 0.712221 tig0026186:+49680 Msa1427380:CDS
CTGAATCAGGCCATGCACAG+TGG 0.713979 tig0026186:+49661 Msa1427380:intron
ATAATGAATGCTTATACCCG+CGG 0.714622 tig0026186:+49280 Msa1427380:CDS
GTAGCTAGGATGGAAAACGC+AGG 0.717458 tig0026186:-54744 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAAAAAAATTATTAT+TGG + tig0026186:47838-47857 Msa1427380:intron 0.0%
!!! TTTGGAATTTTTTAATATAA+GGG + tig0026186:48471-48490 Msa1427380:intron 10.0%
!! TTATATTAAAATTTAAGCAT+GGG + tig0026186:53404-53423 Msa1427380:intron 10.0%
!!! CATTAAATCAATTTAGATTT+TGG - tig0026186:47515-47534 None:intergenic 15.0%
!!! TGAATTTGAGTTTTAATTTT+TGG + tig0026186:48128-48147 Msa1427380:intron 15.0%
!! TTGATTACATCTATTAAAAT+GGG - tig0026186:48286-48305 None:intergenic 15.0%
!! ATTGATTACATCTATTAAAA+TGG - tig0026186:48287-48306 None:intergenic 15.0%
!! TATATTAAAAAATTCCAAAG+AGG - tig0026186:48470-48489 None:intergenic 15.0%
!!! CTTTGGAATTTTTTAATATA+AGG + tig0026186:48470-48489 Msa1427380:intron 15.0%
!! AGAAATCATATAAAAAAATC+AGG - tig0026186:49216-49235 None:intergenic 15.0%
!! TTCATTATCTGTATATTAAA+TGG - tig0026186:49268-49287 None:intergenic 15.0%
!!! TTTGAATATTTAGCATTTTA+AGG + tig0026186:51015-51034 Msa1427380:intron 15.0%
!! ATTTAGATCATTTGTAATAA+TGG + tig0026186:51081-51100 Msa1427380:intron 15.0%
!!! ATTAGATCTCAATTATTTTA+GGG + tig0026186:51524-51543 Msa1427380:intron 15.0%
!! ATCATTTCATAATTAAAAGT+TGG - tig0026186:52921-52940 None:intergenic 15.0%
!! AATAAGATGTTATTAGAAAT+GGG - tig0026186:53311-53330 None:intergenic 15.0%
!!! TAAATTTTAATATAAGACAG+AGG - tig0026186:53399-53418 None:intergenic 15.0%
!! CTTATATTAAAATTTAAGCA+TGG + tig0026186:53403-53422 Msa1427380:intron 15.0%
!!! TTTATCATTTTTTAGTCTTA+TGG + tig0026186:53789-53808 Msa1427380:intron 15.0%
!!! AAAAGTGTATAAAATAAAAG+TGG + tig0026186:55223-55242 Msa1427380:three_prime_UTR 15.0%
!!! GATTTAATGTTTTTTTCGTT+TGG + tig0026186:47526-47545 Msa1427380:intron 20.0%
!!! AGCTATCTCTATATTTTTTT+TGG + tig0026186:47923-47942 Msa1427380:intron 20.0%
!!! GCTATCTCTATATTTTTTTT+GGG + tig0026186:47924-47943 Msa1427380:intron 20.0%
!!! ATGACAATAAGATCATTTTT+AGG + tig0026186:48058-48077 Msa1427380:intron 20.0%
!!! TGACAATAAGATCATTTTTA+GGG + tig0026186:48059-48078 Msa1427380:intron 20.0%
!!! GAGTTTTAATTTTTGGTATA+TGG + tig0026186:48135-48154 Msa1427380:intron 20.0%
!!! TCAATTTTATTTTTGTTTCG+TGG + tig0026186:48302-48321 Msa1427380:intron 20.0%
!! TATCTTCATTCTATTTGTAT+TGG + tig0026186:48393-48412 Msa1427380:intron 20.0%
!! TCTATTTATTTGACCATTAT+TGG + tig0026186:48500-48519 Msa1427380:intron 20.0%
!!! TAAGCAATTTTTCACTTTTT+AGG + tig0026186:48571-48590 Msa1427380:intron 20.0%
!! AAGTTGCTTATAATTAAGAT+CGG + tig0026186:48667-48686 Msa1427380:intron 20.0%
!! TATCATACACTTTCAAAAAA+GGG - tig0026186:49916-49935 None:intergenic 20.0%
!! TGTTCTGCAAAATTATAAAT+TGG + tig0026186:50021-50040 Msa1427380:intron 20.0%
!! AATGTTGAATATTTCAAGAA+TGG - tig0026186:50511-50530 None:intergenic 20.0%
!! TTATCTGCATTATATTGTAA+TGG + tig0026186:50584-50603 Msa1427380:intron 20.0%
!!! TATTGTAATGGCATAATTTT+AGG + tig0026186:50596-50615 Msa1427380:intron 20.0%
!!! TTTTCTTTACAACTCATTTT+AGG + tig0026186:50633-50652 Msa1427380:intron 20.0%
!! AAAAAATCACAATGTTGTTA+CGG - tig0026186:50729-50748 None:intergenic 20.0%
!! ATACTTTCTCATATTGATAA+AGG + tig0026186:51045-51064 Msa1427380:intron 20.0%
!!! AACGTTCTAGTTTAATAATA+AGG + tig0026186:51215-51234 Msa1427380:intron 20.0%
!! AAGTGAAAATTACCAAAAAT+CGG + tig0026186:51320-51339 Msa1427380:intron 20.0%
!!! TATATCCATCTATGTTATTT+AGG + tig0026186:51459-51478 Msa1427380:intron 20.0%
!!! GATTAGATCTCAATTATTTT+AGG + tig0026186:51523-51542 Msa1427380:intron 20.0%
!! TTAATGGAATACAATTATAG+TGG - tig0026186:51889-51908 None:intergenic 20.0%
!!! AGAAACATAAGTTTTCAAAA+AGG - tig0026186:52257-52276 None:intergenic 20.0%
!! TAGAATGAAATGTTCTTTAT+AGG + tig0026186:52285-52304 Msa1427380:intron 20.0%
!! ATCTCTATTTAAATCCAAAT+TGG - tig0026186:53230-53249 None:intergenic 20.0%
!! CAATAAGATGTTATTAGAAA+TGG - tig0026186:53312-53331 None:intergenic 20.0%
!! TAATAAATGATTAGAAGTAG+AGG + tig0026186:53500-53519 Msa1427380:intron 20.0%
!! GAAAAACGAAAAAAAATTAC+TGG - tig0026186:53621-53640 None:intergenic 20.0%
!!! AAATTTTTATTACACTTTGC+AGG + tig0026186:53900-53919 Msa1427380:intron 20.0%
!! TATTATCACAAGAACAAATA+AGG - tig0026186:53999-54018 None:intergenic 20.0%
!! TATTTGTTCTTGTGATAATA+AGG + tig0026186:53999-54018 Msa1427380:CDS 20.0%
!! ATAATAAGGAGATAAGATAT+TGG + tig0026186:54013-54032 Msa1427380:CDS 20.0%
!!! AAATTTTCCAATACTTTATC+AGG + tig0026186:54142-54161 Msa1427380:intron 20.0%
!!! AATTTTCCAATACTTTATCA+GGG + tig0026186:54143-54162 Msa1427380:intron 20.0%
!!! GATCTTAACCTATTATTTTA+GGG - tig0026186:54415-54434 None:intergenic 20.0%
!!! TGATCTTAACCTATTATTTT+AGG - tig0026186:54416-54435 None:intergenic 20.0%
!! TAAAATTGATAAATCATGGA+TGG - tig0026186:54569-54588 None:intergenic 20.0%
!!! ATCCATGATTTATCAATTTT+AGG + tig0026186:54568-54587 Msa1427380:intron 20.0%
!!! TCCATGATTTATCAATTTTA+GGG + tig0026186:54569-54588 Msa1427380:intron 20.0%
!! TCTGAACAAAAATTCATATA+CGG - tig0026186:55106-55125 None:intergenic 20.0%
!!! TTTGATTTTAATGTTCTCGT+TGG + tig0026186:47425-47444 Msa1427380:intron 25.0%
! ATCTAACCTAGAAATTGAAA+AGG - tig0026186:47571-47590 None:intergenic 25.0%
! TTAATGCATGTTTGATATCA+CGG + tig0026186:47624-47643 Msa1427380:intron 25.0%
!!! CTCTATATTTTTTTTGGGAT+TGG + tig0026186:47929-47948 Msa1427380:intron 25.0%
!!! GACAATAAGATCATTTTTAG+GGG + tig0026186:48060-48079 Msa1427380:intron 25.0%
! AAGTACGCATATAATTGAAA+AGG - tig0026186:48349-48368 None:intergenic 25.0%
! ATTCTATTTGTATTGGACAA+TGG + tig0026186:48400-48419 Msa1427380:intron 25.0%
!! CATATGTTTTATGCCAATAA+TGG - tig0026186:48516-48535 None:intergenic 25.0%
! TTATTGGCATAAAACATATG+TGG + tig0026186:48516-48535 Msa1427380:intron 25.0%
!! ACATTATTTACCATTTTCTG+TGG + tig0026186:48720-48739 Msa1427380:intron 25.0%
! ATGATAGTTCCAACAAATTT+AGG + tig0026186:48910-48929 Msa1427380:intron 25.0%
! GAACAAATGTAATACCTTAA+AGG - tig0026186:49176-49195 None:intergenic 25.0%
! ATCAAAGACAAATGATTAGT+AGG - tig0026186:49381-49400 None:intergenic 25.0%
! AGATCGTTGTGAATTTATAT+GGG - tig0026186:49619-49638 None:intergenic 25.0%
! TAGAGAGTGAATATCTTTAA+AGG - tig0026186:49845-49864 None:intergenic 25.0%
! GTATCATACACTTTCAAAAA+AGG - tig0026186:49917-49936 None:intergenic 25.0%
!!! TTTTTGAAAGTGTATGATAC+TGG + tig0026186:49917-49936 Msa1427380:intron 25.0%
! GTCATCATTCATATTATCTT+AGG + tig0026186:49973-49992 Msa1427380:intron 25.0%
! GCAAAATTATAAATTGGACT+TGG + tig0026186:50027-50046 Msa1427380:intron 25.0%
!!! TCTAAGCTATTTTAAGCTAT+TGG + tig0026186:50066-50085 Msa1427380:intron 25.0%
! AAAGATTATATACCTTCAGA+GGG - tig0026186:50159-50178 None:intergenic 25.0%
! TAAAGATTATATACCTTCAG+AGG - tig0026186:50160-50179 None:intergenic 25.0%
! TTGTCAAGTAATAGTTGAAT+GGG - tig0026186:50231-50250 None:intergenic 25.0%
! TTTGTCAAGTAATAGTTGAA+TGG - tig0026186:50232-50251 None:intergenic 25.0%
!! TTCCTATTTTCCTCTTTATT+TGG + tig0026186:50394-50413 Msa1427380:intron 25.0%
! TAACATAGACTTGATTGATA+GGG + tig0026186:50424-50443 Msa1427380:intron 25.0%
!!! ATATTTATTAGCTTTGTCCT+TGG + tig0026186:50951-50970 Msa1427380:intron 25.0%
! TGCATGCATTTAATGTTATT+CGG + tig0026186:51106-51125 Msa1427380:intron 25.0%
! TAAACTTTATCAAACAGTGA+AGG + tig0026186:51170-51189 Msa1427380:intron 25.0%
! AAACTTTATCAAACAGTGAA+GGG + tig0026186:51171-51190 Msa1427380:intron 25.0%
! AGTTAAATCTCTATAACAGA+AGG - tig0026186:51278-51297 None:intergenic 25.0%
! ACATAGATGGATATAAGAAA+AGG - tig0026186:51454-51473 None:intergenic 25.0%
! ATTGAGATCTAATCAGAAAT+AGG - tig0026186:51517-51536 None:intergenic 25.0%
!!! ATCTCAATTATTTTAGGGAT+TGG + tig0026186:51529-51548 Msa1427380:intron 25.0%
!!! AAGGAACCATATTTTGATTA+TGG - tig0026186:51715-51734 None:intergenic 25.0%
! ATAATCAAAATATGGTTCCT+TGG + tig0026186:51714-51733 Msa1427380:CDS 25.0%
! CTTAATACAACTCAGATATA+AGG - tig0026186:51859-51878 None:intergenic 25.0%
! TTACATGTCCACTATATTAA+TGG - tig0026186:52448-52467 None:intergenic 25.0%
! TCTTGAGTATACAATAATCT+AGG + tig0026186:52472-52491 Msa1427380:intron 25.0%
!!! TATTGAATTGGGATGTTTTT+TGG - tig0026186:52692-52711 None:intergenic 25.0%
!! GTGATAAAAAGGTATATTCT+GGG + tig0026186:52890-52909 Msa1427380:intron 25.0%
! ATAGTAATTATCGACCAATT+TGG + tig0026186:53213-53232 Msa1427380:intron 25.0%
! TAGAGATTGAGAAAATAATC+AGG + tig0026186:53243-53262 Msa1427380:intron 25.0%
! TTGTAACATTCGAATATGTA+AGG - tig0026186:53643-53662 None:intergenic 25.0%
! TTACATATTCGAATGTTACA+AGG + tig0026186:53642-53661 Msa1427380:intron 25.0%
! AGATATTGGAATATTGCAAA+TGG + tig0026186:54027-54046 Msa1427380:CDS 25.0%
! TCAATCTATAATTGTACGTT+GGG - tig0026186:54109-54128 None:intergenic 25.0%
! ATCAATCTATAATTGTACGT+TGG - tig0026186:54110-54129 None:intergenic 25.0%
! GAAAAATATAGCATCATTTG+AGG - tig0026186:54363-54382 None:intergenic 25.0%
!! TGATGCTATATTTTTCATCT+TGG + tig0026186:54367-54386 Msa1427380:intron 25.0%
!!! TAACCTATTATTTTAGGGAT+TGG - tig0026186:54410-54429 None:intergenic 25.0%
! ATGATCAAAATATTGTAGCT+AGG - tig0026186:54761-54780 None:intergenic 25.0%
! AAAGATAATGAATGTCCTAT+CGG - tig0026186:54861-54880 None:intergenic 25.0%
CAAAGACAAGGTAACAAAAA+TGG - tig0026186:47346-47365 None:intergenic 30.0%
AAGAAAAAGGAACAAAGACA+AGG - tig0026186:47358-47377 None:intergenic 30.0%
! AGTTAATGCAAGTGATTTTG+TGG + tig0026186:47474-47493 Msa1427380:intron 30.0%
! GATGTTCCTTTTCAATTTCT+AGG + tig0026186:47562-47581 Msa1427380:intron 30.0%
TAGAGATAGCTAGTTAGAAA+TGG - tig0026186:47914-47933 None:intergenic 30.0%
!!! TTTTTTTTGGGATTGGAAAC+AGG + tig0026186:47936-47955 Msa1427380:intron 30.0%
! CATACAATTGATTCTTCATG+AGG - tig0026186:47985-48004 None:intergenic 30.0%
GCAAGAATATTTCATGATGA+AGG + tig0026186:48010-48029 Msa1427380:CDS 30.0%
TTTGGTATATGGTGTAGTTA+TGG + tig0026186:48146-48165 Msa1427380:intron 30.0%
!! TGTTTTCTGGGAATTGTTTA+TGG + tig0026186:48203-48222 Msa1427380:CDS 30.0%
CGCATATAATTGAAAAGGTA+AGG - tig0026186:48344-48363 None:intergenic 30.0%
TTTACTATTCTTACTTGCCT+CGG + tig0026186:48539-48558 Msa1427380:intron 30.0%
TGCTTATAATTAAGATCGGA+TGG + tig0026186:48671-48690 Msa1427380:intron 30.0%
AGCAAATAATTTACGACCTA+TGG - tig0026186:48874-48893 None:intergenic 30.0%
TTTCTTGAGCCTAAATTTGT+TGG - tig0026186:48922-48941 None:intergenic 30.0%
AAATTTAGGCTCAAGAAATG+CGG + tig0026186:48924-48943 Msa1427380:intron 30.0%
AATGGCAACAAAACTAAATG+AGG + tig0026186:49105-49124 Msa1427380:CDS 30.0%
!! TGATGATGCTTATCACATTT+TGG + tig0026186:49433-49452 Msa1427380:intron 30.0%
! GATGATGCTTATCACATTTT+GGG + tig0026186:49434-49453 Msa1427380:intron 30.0%
TTTACAAGAGAAACTTCAAC+AGG + tig0026186:49517-49536 Msa1427380:CDS 30.0%
ATCGTTGTGAATTTATATGG+GGG - tig0026186:49617-49636 None:intergenic 30.0%
GATCGTTGTGAATTTATATG+GGG - tig0026186:49618-49637 None:intergenic 30.0%
CAGATCGTTGTGAATTTATA+TGG - tig0026186:49620-49639 None:intergenic 30.0%
CACTCTCTATTATTGTAAAC+TGG + tig0026186:49856-49875 Msa1427380:intron 30.0%
AAAGGGACTGAAAATTAGTT+GGG - tig0026186:49899-49918 None:intergenic 30.0%
AAAAGGGACTGAAAATTAGT+TGG - tig0026186:49900-49919 None:intergenic 30.0%
ATACGATAAGAGTTCAAATC+TGG - tig0026186:50119-50138 None:intergenic 30.0%
ATAAGAAAAATTCCCTCTGA+AGG + tig0026186:50144-50163 Msa1427380:intron 30.0%
ATGAACTCACAAATAGTTTG+AGG + tig0026186:50193-50212 Msa1427380:intron 30.0%
AGCCAAATAAAGAGGAAAAT+AGG - tig0026186:50399-50418 None:intergenic 30.0%
CTATCAATCAAGTCTATGTT+AGG - tig0026186:50425-50444 None:intergenic 30.0%
CTAACATAGACTTGATTGAT+AGG + tig0026186:50423-50442 Msa1427380:intron 30.0%
ATATTCAACATTCCTTGCTT+TGG + tig0026186:50519-50538 Msa1427380:intron 30.0%
!!! CTCATTTTAGGTTCAAATCA+AGG + tig0026186:50645-50664 Msa1427380:intron 30.0%
!!! ATTTTAGGTTCAAATCAAGG+TGG + tig0026186:50648-50667 Msa1427380:intron 30.0%
!!! TTTTTTTCCTTTCTTCCTGT+TGG + tig0026186:50746-50765 Msa1427380:intron 30.0%
CTAAATTCAAAGTAGAAAGC+TGG + tig0026186:50815-50834 Msa1427380:intron 30.0%
AGTAGAAAGCTGGATATATT+AGG + tig0026186:50825-50844 Msa1427380:intron 30.0%
GTAGAAAGCTGGATATATTA+GGG + tig0026186:50826-50845 Msa1427380:intron 30.0%
!! TTCATATCACAACCGATTTT+TGG - tig0026186:51335-51354 None:intergenic 30.0%
ATGCACCTAAATAACATAGA+TGG - tig0026186:51467-51486 None:intergenic 30.0%
AATTGATTGGAAGATTGTGA+AGG - tig0026186:51599-51618 None:intergenic 30.0%
TTAGTTAATCCATTTGTCAG+TGG + tig0026186:51659-51678 Msa1427380:CDS 30.0%
GCTTGTCCATAATCAAAATA+TGG + tig0026186:51706-51725 Msa1427380:CDS 30.0%
ATACAACTCAGATATAAGGT+TGG - tig0026186:51855-51874 None:intergenic 30.0%
ATGGAATACAATTATAGTGG+TGG - tig0026186:51886-51905 None:intergenic 30.0%
ATTGCTCATAGGAAACTTAA+TGG - tig0026186:51905-51924 None:intergenic 30.0%
GTTTCCTATGAGCAATATTT+AGG + tig0026186:51909-51928 Msa1427380:intron 30.0%
AAAGGAAATTGTGCAATGTT+AGG - tig0026186:52239-52258 None:intergenic 30.0%
!!! AAGATTTCCTTGTTTTCTAG+GGG - tig0026186:52365-52384 None:intergenic 30.0%
!!! CAAGATTTCCTTGTTTTCTA+GGG - tig0026186:52366-52385 None:intergenic 30.0%
!!! TCAAGATTTCCTTGTTTTCT+AGG - tig0026186:52367-52386 None:intergenic 30.0%
TCATCACTCCATTAATATAG+TGG + tig0026186:52437-52456 Msa1427380:intron 30.0%
! ACCTCAAGGTAATTGTTATT+TGG + tig0026186:52515-52534 Msa1427380:intron 30.0%
CTATCAGATTTATCATACCT+TGG - tig0026186:52639-52658 None:intergenic 30.0%
!!! AATTGGGATGTTTTTTGGAA+GGG - tig0026186:52687-52706 None:intergenic 30.0%
TGGAATTCTATATGGCTATA+TGG + tig0026186:52725-52744 Msa1427380:intron 30.0%
CATACGGTTTCAAATTTGAA+TGG + tig0026186:52753-52772 Msa1427380:intron 30.0%
TCATTTAATGAGATCAAGCA+TGG + tig0026186:52796-52815 Msa1427380:CDS 30.0%
! GATGGAAAACTATTTGTTAC+TGG + tig0026186:52862-52881 Msa1427380:CDS 30.0%
! CGTGATAAAAAGGTATATTC+TGG + tig0026186:52889-52908 Msa1427380:intron 30.0%
!! CCAAACCTTTACAGTTTTAT+CGG - tig0026186:53146-53165 None:intergenic 30.0%
CGATAAAACTGTAAAGGTTT+GGG + tig0026186:53144-53163 Msa1427380:CDS 30.0%
!!! GAAATGGGTTATAGTTTTCA+CGG - tig0026186:53296-53315 None:intergenic 30.0%
CAAAAGGTAAATGACAAAGA+GGG - tig0026186:53355-53374 None:intergenic 30.0%
ACAAAAGGTAAATGACAAAG+AGG - tig0026186:53356-53375 None:intergenic 30.0%
ATATAAGACAGAGGAAAAGA+GGG - tig0026186:53390-53409 None:intergenic 30.0%
AATATAAGACAGAGGAAAAG+AGG - tig0026186:53391-53410 None:intergenic 30.0%
AGGATATATGTCAAAGATAG+AGG + tig0026186:53520-53539 Msa1427380:intron 30.0%
GGATATATGTCAAAGATAGA+GGG + tig0026186:53521-53540 Msa1427380:intron 30.0%
GATATATGTCAAAGATAGAG+GGG + tig0026186:53522-53541 Msa1427380:intron 30.0%
! ATTAAATCTAAAGCAGATCC+AGG - tig0026186:53761-53780 None:intergenic 30.0%
ATTGCAAATGGTAGTTGTAT+TGG + tig0026186:54039-54058 Msa1427380:CDS 30.0%
TTGCAAATGGTAGTTGTATT+GGG + tig0026186:54040-54059 Msa1427380:CDS 30.0%
! TAGTTGTATTGGGATTTTCA+AGG + tig0026186:54050-54069 Msa1427380:CDS 30.0%
CTACCAATCCCTAAAATAAT+AGG + tig0026186:54404-54423 Msa1427380:intron 30.0%
ATAGAGAAAGATGACATTGA+TGG - tig0026186:54506-54525 None:intergenic 30.0%
GCCCTAAAATTGATAAATCA+TGG - tig0026186:54573-54592 None:intergenic 30.0%
TAATGATCTGGTTAAACTCT+GGG + tig0026186:54655-54674 Msa1427380:CDS 30.0%
TCAAAATATTGTAGCTAGGA+TGG - tig0026186:54757-54776 None:intergenic 30.0%
!! AATACATACTCTTTTGACTC+TGG + tig0026186:54834-54853 Msa1427380:intron 30.0%
ATATAGGTTTACATTCCTTC+AGG + tig0026186:55057-55076 Msa1427380:three_prime_UTR 30.0%
! TTTTGCCAATGTAAGTAATG+CGG + tig0026186:55178-55197 Msa1427380:three_prime_UTR 30.0%
! TAATGCGGTTTTCTTACATT+TGG + tig0026186:55193-55212 Msa1427380:three_prime_UTR 30.0%
! AATGCGGTTTTCTTACATTT+GGG + tig0026186:55194-55213 Msa1427380:three_prime_UTR 30.0%
TTTATCAGGTTCATCGCATT+TGG - tig0026186:47298-47317 None:intergenic 35.0%
GAAACTGTGTACGAAGAAAA+AGG - tig0026186:47371-47390 None:intergenic 35.0%
TCAGAGTATGTTTGGTATCA+CGG - tig0026186:47685-47704 None:intergenic 35.0%
GGCAATGTTGAACAGAATAT+TGG + tig0026186:48031-48050 Msa1427380:CDS 35.0%
GAATTGTTTATGGCCAAACA+AGG + tig0026186:48213-48232 Msa1427380:CDS 35.0%
TGAGAGTGAAAAACCTTGTT+TGG - tig0026186:48229-48248 None:intergenic 35.0%
ACCAGCATTATCTTACCTTA+AGG + tig0026186:48251-48270 Msa1427380:CDS 35.0%
ACCTTAAGGTAAGATAATGC+TGG - tig0026186:48255-48274 None:intergenic 35.0%
TTGAAAAGGTAAGGACACAA+AGG - tig0026186:48335-48354 None:intergenic 35.0%
GTGCAATGTAAGAATACAAG+CGG - tig0026186:48448-48467 None:intergenic 35.0%
ATTCTTACATTGCACCTCTT+TGG + tig0026186:48453-48472 Msa1427380:intron 35.0%
ATTGCTTATAATTGAGACCG+AGG - tig0026186:48559-48578 None:intergenic 35.0%
CATCATAGAACCACAGAAAA+TGG - tig0026186:48733-48752 None:intergenic 35.0%
TTTGACAGTGACAGTATCTT+AGG - tig0026186:48785-48804 None:intergenic 35.0%
!! TAGTATGTAGTATCGACCAT+AGG + tig0026186:48855-48874 Msa1427380:intron 35.0%
!! ACCATAGGAGCATTGTTTAT+GGG - tig0026186:49058-49077 None:intergenic 35.0%
CCATTGTATTAGAAGTAACC+CGG - tig0026186:49090-49109 None:intergenic 35.0%
CAACAAAACTAAATGAGGAC+AGG + tig0026186:49110-49129 Msa1427380:CDS 35.0%
!! ATCAAAAGCATTTCCCTGAA+GGG - tig0026186:49146-49165 None:intergenic 35.0%
!! TTTTGATGACAGGACCTTTA+AGG + tig0026186:49159-49178 Msa1427380:CDS 35.0%
ATAATGAATGCTTATACCCG+CGG + tig0026186:49280-49299 Msa1427380:CDS 35.0%
!! TGCTATTTCGTTCAACAACA+AGG - tig0026186:49329-49348 None:intergenic 35.0%
AACGAAATAGCACCAATAAC+TGG + tig0026186:49337-49356 Msa1427380:CDS 35.0%
TTCTGTTTGCAGACAAACAT+TGG + tig0026186:49478-49497 Msa1427380:intron 35.0%
TTGTAAAATGCTAAGTGCAC+TGG - tig0026186:49504-49523 None:intergenic 35.0%
TTTACGATTACTTGTAACCC+TGG - tig0026186:49566-49585 None:intergenic 35.0%
!! ACCATCTTTTGTTCTGAATC+AGG + tig0026186:49648-49667 Msa1427380:intron 35.0%
AGTACCATGAACACTGTAAA+TGG - tig0026186:49731-49750 None:intergenic 35.0%
CTAACAAGAAAACGTGAACT+AGG - tig0026186:49786-49805 None:intergenic 35.0%
TAGTCTTTCAATAGCAGACT+CGG + tig0026186:49803-49822 Msa1427380:intron 35.0%
! AGACTCGGTATGTTCAATAA+GGG + tig0026186:49818-49837 Msa1427380:intron 35.0%
!! ATTTGTTGTTGTTGCCTGAA+AGG + tig0026186:49944-49963 Msa1427380:intron 35.0%
TCAAGTAATAGTTGAATGGG+AGG - tig0026186:50228-50247 None:intergenic 35.0%
GGGAGTCTCAGTTTATTAAT+CGG - tig0026186:50280-50299 None:intergenic 35.0%
TAGTTAGTTAGGAGGTAGTT+AGG - tig0026186:50324-50343 None:intergenic 35.0%
ATGTATCTGTCATAGTTGTC+AGG - tig0026186:50370-50389 None:intergenic 35.0%
TTAGGAGAAGCCAAATAAAG+AGG - tig0026186:50407-50426 None:intergenic 35.0%
CCAGTTAAGGTAATAGAACA+AGG - tig0026186:50455-50474 None:intergenic 35.0%
CCTTGTTCTATTACCTTAAC+TGG + tig0026186:50452-50471 Msa1427380:intron 35.0%
AAGCTGACATAATCCAGTTA+AGG - tig0026186:50468-50487 None:intergenic 35.0%
AGCCAAAATCTTACTGCTAA+AGG - tig0026186:50699-50718 None:intergenic 35.0%
GCTGGATATATTAGGGAAAA+TGG + tig0026186:50833-50852 Msa1427380:intron 35.0%
! TTGTCCTTGGATGCATTTTA+AGG + tig0026186:50964-50983 Msa1427380:intron 35.0%
TCAACCTTAAAATGCATCCA+AGG - tig0026186:50971-50990 None:intergenic 35.0%
TCGGTTGTGATATGAAATCA+TGG + tig0026186:51339-51358 Msa1427380:intron 35.0%
! CTTCCAATCAATTTTCACCA+CGG + tig0026186:51606-51625 Msa1427380:CDS 35.0%
TGATTATGGACAAGCAAACT+TGG - tig0026186:51701-51720 None:intergenic 35.0%
AACCACCTACAGAATTTGAT+TGG - tig0026186:51748-51767 None:intergenic 35.0%
! AGGTGTTACAATATTGGGAA+TGG - tig0026186:51771-51790 None:intergenic 35.0%
! TGTGCAGGTGTTACAATATT+GGG - tig0026186:51776-51795 None:intergenic 35.0%
! TTGTGCAGGTGTTACAATAT+TGG - tig0026186:51777-51796 None:intergenic 35.0%
ATTGTAACACCTGCACAAAT+TGG + tig0026186:51779-51798 Msa1427380:CDS 35.0%
! AAGGTTGGTTGATACCTTAT+GGG - tig0026186:51840-51859 None:intergenic 35.0%
! TAAGGTTGGTTGATACCTTA+TGG - tig0026186:51841-51860 None:intergenic 35.0%
AGCTCCTAAATATTGCTCAT+AGG - tig0026186:51916-51935 None:intergenic 35.0%
!! CTACTTTTCGTTTTTGCTTC+CGG - tig0026186:52005-52024 None:intergenic 35.0%
TGCATCAACACAGAATCAAT+TGG + tig0026186:52152-52171 Msa1427380:CDS 35.0%
GAAATTGTGCAATGTTAGGA+TGG - tig0026186:52235-52254 None:intergenic 35.0%
!!! AGATTTCCTTGTTTTCTAGG+GGG - tig0026186:52364-52383 None:intergenic 35.0%
!!! TGAGGTCAAGTAGTTTTTTC+AGG - tig0026186:52501-52520 None:intergenic 35.0%
GAAAAAACTACTTGACCTCA+AGG + tig0026186:52501-52520 Msa1427380:intron 35.0%
GCCAAATAACAATTACCTTG+AGG - tig0026186:52519-52538 None:intergenic 35.0%
!! CAAGGTAATTGTTATTTGGC+AGG + tig0026186:52519-52538 Msa1427380:intron 35.0%
!!! ATTGGGATGTTTTTTGGAAG+GGG - tig0026186:52686-52705 None:intergenic 35.0%
!!! GAATTGGGATGTTTTTTGGA+AGG - tig0026186:52688-52707 None:intergenic 35.0%
! CCATCAAGTGCTATTGAATT+GGG - tig0026186:52703-52722 None:intergenic 35.0%
! TCCATCAAGTGCTATTGAAT+TGG - tig0026186:52704-52723 None:intergenic 35.0%
!! TGATGGACTGGAATTCTATA+TGG + tig0026186:52717-52736 Msa1427380:intron 35.0%
! TGGCTATATGGAAAAGCATA+CGG + tig0026186:52737-52756 Msa1427380:intron 35.0%
!! TGAATGGTCTGCTTTTCATT+AGG + tig0026186:52769-52788 Msa1427380:intron 35.0%
TAATGAGATCAAGCATGGAT+TGG + tig0026186:52801-52820 Msa1427380:CDS 35.0%
! AACAAATAGTTTTCCATCCG+AGG - tig0026186:52860-52879 None:intergenic 35.0%
! GGAAAACTATTTGTTACTGG+TGG + tig0026186:52865-52884 Msa1427380:CDS 35.0%
GTTAATCTGCTATGAGATTC+AGG + tig0026186:53006-53025 Msa1427380:intron 35.0%
TAGCAACATAGAACATGCTT+GGG - tig0026186:53114-53133 None:intergenic 35.0%
CCGATAAAACTGTAAAGGTT+TGG + tig0026186:53143-53162 Msa1427380:CDS 35.0%
AGGGTTGTAGAAGAAACAAA+AGG - tig0026186:53371-53390 None:intergenic 35.0%
!! TACAGGTTGATTATTAGCAG+AGG - tig0026186:53557-53576 None:intergenic 35.0%
GCTAATAATCAACCTGTAGT+TGG + tig0026186:53559-53578 Msa1427380:intron 35.0%
AGCAAACAGCATGAATGTAA+GGG - tig0026186:53596-53615 None:intergenic 35.0%
TAGCAAACAGCATGAATGTA+AGG - tig0026186:53597-53616 None:intergenic 35.0%
! AGTGGCAAAGTTGATTATGT+TGG + tig0026186:53699-53718 Msa1427380:intron 35.0%
! TTTTATTACACTTTGCAGGC+TGG + tig0026186:53904-53923 Msa1427380:intron 35.0%
ATTCTCTTCGGACATTTACA+GGG + tig0026186:53929-53948 Msa1427380:CDS 35.0%
TTTCCAATACTTTATCAGGG+TGG + tig0026186:54146-54165 Msa1427380:intron 35.0%
GAGTTGCAGATTTAAATTGC+AGG + tig0026186:54259-54278 Msa1427380:CDS 35.0%
GATGGATAACACTTTGATGT+TGG - tig0026186:54488-54507 None:intergenic 35.0%
TTGATAAATCATGGATGGTC+AGG - tig0026186:54564-54583 None:intergenic 35.0%
GTAATGATCTGGTTAAACTC+TGG + tig0026186:54654-54673 Msa1427380:CDS 35.0%
AGTATCAGATGTTACTGGAT+TGG + tig0026186:54971-54990 Msa1427380:CDS 35.0%
ATGATAGGACTTTCAAGATC+TGG + tig0026186:55009-55028 Msa1427380:CDS 35.0%
!! GCACTTGCTGTTGATAATAT+AGG + tig0026186:55041-55060 Msa1427380:three_prime_UTR 35.0%
! GTTCAGACTTGCTCATATAT+AGG + tig0026186:55119-55138 Msa1427380:three_prime_UTR 35.0%
CTTATGCTACAAGCAGTAAA+TGG + tig0026186:55143-55162 Msa1427380:three_prime_UTR 35.0%
! AAGCAGTAAATGGCATGTTT+TGG + tig0026186:55153-55172 Msa1427380:three_prime_UTR 35.0%
GAAAACCGCATTACTTACAT+TGG - tig0026186:55186-55205 None:intergenic 35.0%
GCGATTTCATACGCTTTATC+AGG - tig0026186:47312-47331 None:intergenic 40.0%
ACACTTGACACACGTGATTA+CGG + tig0026186:47736-47755 Msa1427380:intron 40.0%
GCGGTATATATGCTTAACCT+TGG - tig0026186:48429-48448 None:intergenic 40.0%
GTTTATGGGACAGAGAACAT+TGG - tig0026186:49044-49063 None:intergenic 40.0%
TCCCATAAACAATGCTCCTA+TGG + tig0026186:49054-49073 Msa1427380:CDS 40.0%
!! CACCATAGGAGCATTGTTTA+TGG - tig0026186:49059-49078 None:intergenic 40.0%
TAAACAATGCTCCTATGGTG+AGG + tig0026186:49059-49078 Msa1427380:CDS 40.0%
CCGGGTTACTTCTAATACAA+TGG + tig0026186:49087-49106 Msa1427380:CDS 40.0%
!! TCAAAAGCATTTCCCTGAAG+GGG - tig0026186:49145-49164 None:intergenic 40.0%
!! CATCAAAAGCATTTCCCTGA+AGG - tig0026186:49147-49166 None:intergenic 40.0%
!! AGGGAAATGCTTTTGATGAC+AGG + tig0026186:49149-49168 Msa1427380:CDS 40.0%
GAAATAGCACCAATAACTGG+TGG + tig0026186:49340-49359 Msa1427380:CDS 40.0%
AATCAAAACCAGCAACTTCC+AGG + tig0026186:49545-49564 Msa1427380:CDS 40.0%
ATCAAAACCAGCAACTTCCA+GGG + tig0026186:49546-49565 Msa1427380:CDS 40.0%
GCCTGATTCAGAACAAAAGA+TGG - tig0026186:49652-49671 None:intergenic 40.0%
!! TCTCAAGCTGTTGTTTCAGA+AGG + tig0026186:49703-49722 Msa1427380:CDS 40.0%
GGATCCATTTACAGTGTTCA+TGG + tig0026186:49724-49743 Msa1427380:CDS 40.0%
! CAGACTCGGTATGTTCAATA+AGG + tig0026186:49817-49836 Msa1427380:intron 40.0%
ATGATGACTTTCAGCCTTTC+AGG - tig0026186:49961-49980 None:intergenic 40.0%
TTAGTTAGGAGGTAGTTAGG+AGG - tig0026186:50321-50340 None:intergenic 40.0%
ACTGACAGTAGTTAGTTAGG+AGG - tig0026186:50332-50351 None:intergenic 40.0%
CAGACTGACAGTAGTTAGTT+AGG - tig0026186:50335-50354 None:intergenic 40.0%
! GGCCTTTAGCAGTAAGATTT+TGG + tig0026186:50694-50713 Msa1427380:intron 40.0%
TGAACCATGAGAGATAGACT+GGG - tig0026186:50787-50806 None:intergenic 40.0%
ATGAACCATGAGAGATAGAC+TGG - tig0026186:50788-50807 None:intergenic 40.0%
TTAGGGAAAATGGCATTCAG+TGG + tig0026186:50843-50862 Msa1427380:intron 40.0%
AGAACGTTGATCAATCAGAC+AGG - tig0026186:51203-51222 None:intergenic 40.0%
TAAGGAAGTCTCTCTCTACT+TGG + tig0026186:51233-51252 Msa1427380:intron 40.0%
CTTCCTCACAGCTGAATTTA+AGG - tig0026186:51391-51410 None:intergenic 40.0%
AAATAGGATTGCTCACACAG+TGG - tig0026186:51501-51520 None:intergenic 40.0%
CCATCAAAACCACTGACAAA+TGG - tig0026186:51671-51690 None:intergenic 40.0%
!!! CCATTTGTCAGTGGTTTTGA+TGG + tig0026186:51668-51687 Msa1427380:CDS 40.0%
AATATGGTTCCTTGGAACGA+TGG + tig0026186:51722-51741 Msa1427380:CDS 40.0%
GATGGCCAATCAAATTCTGT+AGG + tig0026186:51740-51759 Msa1427380:CDS 40.0%
GTCATATCTAAGTCCAGATG+AGG - tig0026186:51818-51837 None:intergenic 40.0%
GGACTTAGATATGACCCATA+AGG + tig0026186:51823-51842 Msa1427380:CDS 40.0%
! TGAGCGTGTGTCTGAATTTT+AGG + tig0026186:51960-51979 Msa1427380:intron 40.0%
!! CTTCCAAAAGTCAAGTTGAC+CGG + tig0026186:51983-52002 Msa1427380:CDS 40.0%
CGGAAGCAAAAACGAAAAGT+AGG + tig0026186:52003-52022 Msa1427380:CDS 40.0%
CGAAAAGTAGGATCAAGTTC+AGG + tig0026186:52015-52034 Msa1427380:CDS 40.0%
! TCTGGAACTGCAAACACAAT+GGG + tig0026186:52051-52070 Msa1427380:CDS 40.0%
AACACAATGGGATCATCTTC+TGG + tig0026186:52063-52082 Msa1427380:CDS 40.0%
AAACCATTCTGTTGCCAAGT+TGG - tig0026186:52123-52142 None:intergenic 40.0%
ACTTGGCAACAGAATGGTTT+CGG + tig0026186:52123-52142 Msa1427380:CDS 40.0%
CACAATCAGGCAATGTATAC+AGG - tig0026186:52212-52231 None:intergenic 40.0%
AATGTTAGGATGGCACAATC+AGG - tig0026186:52225-52244 None:intergenic 40.0%
!!! GATTTCCTTGTTTTCTAGGG+GGG - tig0026186:52363-52382 None:intergenic 40.0%
! TGTTATTTGGCAGGCTCATA+TGG + tig0026186:52528-52547 Msa1427380:intron 40.0%
!! CTTGCTGATTCAGACCATAA+TGG + tig0026186:52604-52623 Msa1427380:CDS 40.0%
!!! ATGTTTTTTGGAAGGGGGAA+GGG - tig0026186:52680-52699 None:intergenic 40.0%
!!! TTGGGATGTTTTTTGGAAGG+GGG - tig0026186:52685-52704 None:intergenic 40.0%
CCCAATTCAATAGCACTTGA+TGG + tig0026186:52700-52719 Msa1427380:intron 40.0%
! TTCAATAGCACTTGATGGAC+TGG + tig0026186:52705-52724 Msa1427380:intron 40.0%
TACTGGTGGTCGTGATAAAA+AGG + tig0026186:52879-52898 Msa1427380:CDS 40.0%
ATGAGATTCAGGCTTCTCTA+TGG + tig0026186:53017-53036 Msa1427380:intron 40.0%
GTAGCAACATAGAACATGCT+TGG - tig0026186:53115-53134 None:intergenic 40.0%
!! CTTTACAGTTTTATCGGCTG+AGG - tig0026186:53140-53159 None:intergenic 40.0%
CTCAGCCGATAAAACTGTAA+AGG + tig0026186:53138-53157 Msa1427380:CDS 40.0%
GAAATGCAAGAACCAACTAC+AGG - tig0026186:53574-53593 None:intergenic 40.0%
GCATCAGTTATGCAACTAAG+TGG + tig0026186:53681-53700 Msa1427380:intron 40.0%
!! ACTTGCTTTAAAAGACCTCC+TGG + tig0026186:53740-53759 Msa1427380:intron 40.0%
! AAATCTAAAGCAGATCCAGG+AGG - tig0026186:53758-53777 None:intergenic 40.0%
CATTCTCTTCGGACATTTAC+AGG + tig0026186:53928-53947 Msa1427380:CDS 40.0%
GACTTTCATCCAAGTAAACG+TGG + tig0026186:53973-53992 Msa1427380:CDS 40.0%
CAAATAAGGCCACGTTTACT+TGG - tig0026186:53985-54004 None:intergenic 40.0%
ACACCACCCTGATAAAGTAT+TGG - tig0026186:54152-54171 None:intergenic 40.0%
GTGAGATTTCAACCTGGTTT+GGG + tig0026186:54179-54198 Msa1427380:CDS 40.0%
!! ATTTCAACCTGGTTTGGGAA+AGG + tig0026186:54184-54203 Msa1427380:CDS 40.0%
! GCACTCTTCTGGAAATTATC+TGG + tig0026186:54622-54641 Msa1427380:CDS 40.0%
GGCATCTGTTTGTAATGATC+TGG + tig0026186:54643-54662 Msa1427380:CDS 40.0%
! TTTGATCATTTGCTGCAGTG+AGG + tig0026186:54772-54791 Msa1427380:CDS 40.0%
TAATTCAGTCGCTTATGCTC+TGG + tig0026186:54886-54905 Msa1427380:intron 40.0%
AATTCAGTCGCTTATGCTCT+GGG + tig0026186:54887-54906 Msa1427380:intron 40.0%
TTGGCAGTATCAGATGTTAC+TGG + tig0026186:54966-54985 Msa1427380:CDS 40.0%
! ATCAGATGTTACTGGATTGG+TGG + tig0026186:54974-54993 Msa1427380:CDS 40.0%
AGTCCTATCATGACTAACTG+AGG - tig0026186:55000-55019 None:intergenic 40.0%
TTCCTTCAGGCAACAAACAT+AGG + tig0026186:55070-55089 Msa1427380:three_prime_UTR 40.0%
! TTCCTATGTTTGTTGCCTGA+AGG - tig0026186:55075-55094 None:intergenic 40.0%
!! CGGTAGCTTTTCAAGAATCG+CGG + tig0026186:47644-47663 Msa1427380:intron 45.0%
CACGTGCTTCAGAGTATGTT+TGG - tig0026186:47693-47712 None:intergenic 45.0%
!! ACATACTCTGAAGCACGTGT+CGG + tig0026186:47694-47713 Msa1427380:intron 45.0%
GTGTGTCAAGTGTGTTGTGT+CGG - tig0026186:47729-47748 None:intergenic 45.0%
ACCGTGATACCAACATGTGT+CGG + tig0026186:47782-47801 Msa1427380:intron 45.0%
ACCGACACATGTTGGTATCA+CGG - tig0026186:47786-47805 None:intergenic 45.0%
AATGGGACAAACGCACCTTA+AGG - tig0026186:48269-48288 None:intergenic 45.0%
GTATTGGACAATGGAGACCA+AGG + tig0026186:48409-48428 Msa1427380:intron 45.0%
TATGGGGCTGAAACTCAAGA+AGG + tig0026186:49010-49029 Msa1427380:CDS 45.0%
AACAAGGCACAATCCTCGTT+TGG - tig0026186:49313-49332 None:intergenic 45.0%
ATGATTAGTAGGCACCCTGA+AGG - tig0026186:49370-49389 None:intergenic 45.0%
GGAGGGAAAAGTTGTTGCAA+GGG - tig0026186:50300-50319 None:intergenic 45.0%
AGGAGGGAAAAGTTGTTGCA+AGG - tig0026186:50301-50320 None:intergenic 45.0%
TTAGGAGGTAGTTAGGAGGA+GGG - tig0026186:50317-50336 None:intergenic 45.0%
AGCAAGTATGCACCAAAGCA+AGG - tig0026186:50534-50553 None:intergenic 45.0%
! GTAGCGACTTGACTCTGAAA+GGG + tig0026186:50670-50689 Msa1427380:CDS 45.0%
TTTCCTTTCTTCCTGTTGGC+TGG + tig0026186:50750-50769 Msa1427380:intron 45.0%
AACCATGAGAGATAGACTGG+GGG - tig0026186:50785-50804 None:intergenic 45.0%
GAACCATGAGAGATAGACTG+GGG - tig0026186:50786-50805 None:intergenic 45.0%
GTGCAGTGAGGTTACTTCAT+TGG + tig0026186:50865-50884 Msa1427380:intron 45.0%
CTGCCGTGGTGAAAATTGAT+TGG - tig0026186:51612-51631 None:intergenic 45.0%
TGAAACATAAGTTGCTGCCG+TGG - tig0026186:51626-51645 None:intergenic 45.0%
ACGGCAGCAACTTATGTTTC+AGG + tig0026186:51625-51644 Msa1427380:CDS 45.0%
ACTTATGTTTCAGGCACAGC+AGG + tig0026186:51634-51653 Msa1427380:CDS 45.0%
! TTTGATTGGCCATCGTTCCA+AGG - tig0026186:51734-51753 None:intergenic 45.0%
GGCCAATCAAATTCTGTAGG+TGG + tig0026186:51743-51762 Msa1427380:CDS 45.0%
TCAGGGAAACCAATTTGTGC+AGG - tig0026186:51791-51810 None:intergenic 45.0%
TTTCCCTGAATTGCCTCATC+TGG + tig0026186:51802-51821 Msa1427380:CDS 45.0%
AGTCCAGATGAGGCAATTCA+GGG - tig0026186:51808-51827 None:intergenic 45.0%
AAGTCCAGATGAGGCAATTC+AGG - tig0026186:51809-51828 None:intergenic 45.0%
AGGAGCTGTAATGCATGTCT+AGG + tig0026186:51929-51948 Msa1427380:intron 45.0%
! CTTCCGGTCAACTTGACTTT+TGG - tig0026186:51989-52008 None:intergenic 45.0%
GTTTGCAGTTCCAGAGCTAT+TGG - tig0026186:52046-52065 None:intergenic 45.0%
!! CTCTGGAACTGCAAACACAA+TGG + tig0026186:52050-52069 Msa1427380:CDS 45.0%
! GTCTGCATAGTTGGTGTAGA+GGG - tig0026186:52093-52112 None:intergenic 45.0%
! TGTCTGCATAGTTGGTGTAG+AGG - tig0026186:52094-52113 None:intergenic 45.0%
ATGGACCATCTCAAGAGCAA+CGG + tig0026186:52547-52566 Msa1427380:CDS 45.0%
AAGATCCGTTGCTCTTGAGA+TGG - tig0026186:52555-52574 None:intergenic 45.0%
TCTCAAGAGCAACGGATCTT+TGG + tig0026186:52555-52574 Msa1427380:CDS 45.0%
CTTGGTCAACTCGTCCATTA+TGG - tig0026186:52621-52640 None:intergenic 45.0%
!! CATAATGGACGAGTTGACCA+AGG + tig0026186:52619-52638 Msa1427380:CDS 45.0%
!!! GATGTTTTTTGGAAGGGGGA+AGG - tig0026186:52681-52700 None:intergenic 45.0%
! TGACTGTTGTCACTTCTCCT+CGG + tig0026186:52840-52859 Msa1427380:CDS 45.0%
GCTCTTCAAGCGTAGATTTC+AGG - tig0026186:53060-53079 None:intergenic 45.0%
TTATCAGGGTGGTGTAACTC+AGG + tig0026186:54157-54176 Msa1427380:intron 45.0%
ACTCAGGTGAGATTTCAACC+TGG + tig0026186:54173-54192 Msa1427380:CDS 45.0%
GGTGAGATTTCAACCTGGTT+TGG + tig0026186:54178-54197 Msa1427380:CDS 45.0%
!! TCTTTTGACTCTGGACCGAT+AGG + tig0026186:54843-54862 Msa1427380:intron 45.0%
CGACAAGCTTGTATCTGCAT+TGG + tig0026186:54947-54966 Msa1427380:CDS 45.0%
TGGCCTCAGTTAGTCATGAT+AGG + tig0026186:54994-55013 Msa1427380:CDS 45.0%
CAGGCAACAAACATAGGAAG+TGG + tig0026186:55076-55095 Msa1427380:three_prime_UTR 45.0%
!! AAATAATGTAATAAAAATAA+TGG - tig0026186:48709-48728 None:intergenic 5.0%
!!! TTTTTAGTTTATTAATTAAT+TGG + tig0026186:51364-51383 Msa1427380:intron 5.0%
!!! TTTTAGTTTATTAATTAATT+GGG + tig0026186:51365-51384 Msa1427380:intron 5.0%
CAAGAATCGCGGCTACAAAG+CGG + tig0026186:47655-47674 Msa1427380:intron 50.0%
ACACACGTGATTACGGCTCA+CGG + tig0026186:47743-47762 Msa1427380:intron 50.0%
GACACATGTTGGTATCACGG+TGG - tig0026186:47783-47802 None:intergenic 50.0%
TGTGTGACACCGACACATGT+TGG - tig0026186:47794-47813 None:intergenic 50.0%
GGTGTAGTTATGGATGCACC+TGG + tig0026186:48156-48175 Msa1427380:intron 50.0%
CACTCGAAGAGAGAACAACC+AGG - tig0026186:48177-48196 None:intergenic 50.0%
CTGGTTGTTCTCTCTTCGAG+TGG + tig0026186:48175-48194 Msa1427380:CDS 50.0%
GTTGTTCTCTCTTCGAGTGG+TGG + tig0026186:48178-48197 Msa1427380:CDS 50.0%
! TCGAGTGGTGGTCTGTTTTC+TGG + tig0026186:48190-48209 Msa1427380:CDS 50.0%
! CGAGTGGTGGTCTGTTTTCT+GGG + tig0026186:48191-48210 Msa1427380:CDS 50.0%
CAGGGCTCTGCAATATGAAC+TGG - tig0026186:48976-48995 None:intergenic 50.0%
CATATTGCTGCAGCTGAGCA+GGG - tig0026186:48994-49013 None:intergenic 50.0%
CTGCTCAGCTGCAGCAATAT+GGG + tig0026186:48993-49012 Msa1427380:CDS 50.0%
TGCTCAGCTGCAGCAATATG+GGG + tig0026186:48994-49013 Msa1427380:CDS 50.0%
AGGTTGAAGACTCCCCTTCA+GGG + tig0026186:49130-49149 Msa1427380:CDS 50.0%
GAAGGCTGTCCACCAGTTAT+TGG - tig0026186:49352-49371 None:intergenic 50.0%
! ATAACTGGTGGACAGCCTTC+AGG + tig0026186:49352-49371 Msa1427380:CDS 50.0%
! TAACTGGTGGACAGCCTTCA+GGG + tig0026186:49353-49372 Msa1427380:CDS 50.0%
CTTGTAACCCTGGAAGTTGC+TGG - tig0026186:49556-49575 None:intergenic 50.0%
GTGGCATGAGTGCAATGATG+AGG + tig0026186:49680-49699 Msa1427380:CDS 50.0%
GTTAGGAGGTAGTTAGGAGG+AGG - tig0026186:50318-50337 None:intergenic 50.0%
GGTAGCGACTTGACTCTGAA+AGG + tig0026186:50669-50688 Msa1427380:CDS 50.0%
TTCCCCCAGTCTATCTCTCA+TGG + tig0026186:50780-50799 Msa1427380:intron 50.0%
GGGCCTTAAATTCAGCTGTG+AGG + tig0026186:51385-51404 Msa1427380:intron 50.0%
GGGATTGGATGAGCATCATG+CGG + tig0026186:51544-51563 Msa1427380:intron 50.0%
TCAGGTCTTGCCAATAGCTC+TGG + tig0026186:52033-52052 Msa1427380:CDS 50.0%
CTGCCAACTTGGCAACAGAA+TGG + tig0026186:52117-52136 Msa1427380:CDS 50.0%
CATGTCCCCCCTAGAAAACA+AGG + tig0026186:52355-52374 Msa1427380:intron 50.0%
CAAGAGCAACGGATCTTTGG+CGG + tig0026186:52558-52577 Msa1427380:CDS 50.0%
!! TTTTTGGAAGGGGGAAGGGA+GGG - tig0026186:52676-52695 None:intergenic 50.0%
!!! TTTTTTGGAAGGGGGAAGGG+AGG - tig0026186:52677-52696 None:intergenic 50.0%
! TGTTGTCACTTCTCCTCGGA+TGG + tig0026186:52844-52863 Msa1427380:CDS 50.0%
! CGCTTGAAGAGCACACTCAA+CGG + tig0026186:53068-53087 Msa1427380:CDS 50.0%
! TGCAGGCTGGTCATTCTCTT+CGG + tig0026186:53917-53936 Msa1427380:intron 50.0%
GCAAGAACCTTTCCCAAACC+AGG - tig0026186:54194-54213 None:intergenic 50.0%
CAGGAGCTACATTACGAGGA+GGG - tig0026186:54545-54564 None:intergenic 50.0%
TCAGGAGCTACATTACGAGG+AGG - tig0026186:54546-54565 None:intergenic 50.0%
TGGTCAGGAGCTACATTACG+AGG - tig0026186:54549-54568 None:intergenic 50.0%
CTGAACGAACAAGGCTCATG+TGG - tig0026186:54595-54614 None:intergenic 50.0%
CTGGTTAAACTCTGGGCCAT+TGG + tig0026186:54662-54681 Msa1427380:CDS 50.0%
GTAGCTAGGATGGAAAACGC+AGG - tig0026186:54747-54766 None:intergenic 50.0%
!! GCTTATGCTCTGGGACTTTG+AGG + tig0026186:54896-54915 Msa1427380:CDS 50.0%
GATACAAGCTTGTCGTGTGC+AGG - tig0026186:54942-54961 None:intergenic 50.0%
CCATATTGCTGCAGCTGAGC+AGG - tig0026186:48995-49014 None:intergenic 55.0%
CCTGCTCAGCTGCAGCAATA+TGG + tig0026186:48992-49011 Msa1427380:CDS 55.0%
CTCCTATGGTGAGGCAGAAC+CGG + tig0026186:49068-49087 Msa1427380:CDS 55.0%
TCCTATGGTGAGGCAGAACC+GGG + tig0026186:49069-49088 Msa1427380:CDS 55.0%
! CAGGTTGAAGACTCCCCTTC+AGG + tig0026186:49129-49148 Msa1427380:CDS 55.0%
CTGAATCAGGCCATGCACAG+TGG + tig0026186:49661-49680 Msa1427380:intron 55.0%
TGCACTCATGCCACTGTGCA+TGG - tig0026186:49674-49693 None:intergenic 55.0%
! GCGACTTGACTCTGAAAGGG+TGG + tig0026186:50673-50692 Msa1427380:CDS 55.0%
ACGCCAGCCAACAGGAAGAA+AGG - tig0026186:50756-50775 None:intergenic 55.0%
TGGCATTCAGTGGTGCAGTG+AGG + tig0026186:50853-50872 Msa1427380:intron 55.0%
GGCAGTCGTGTCTGCATAGT+TGG - tig0026186:52102-52121 None:intergenic 55.0%
TGCAGACACGACTGCCAACT+TGG + tig0026186:52106-52125 Msa1427380:CDS 55.0%
! GCCTTGTTCGTTCAGTGTGC+TGG + tig0026186:54600-54619 Msa1427380:CDS 55.0%
GCCAGCACACTGAACGAACA+AGG - tig0026186:54604-54623 None:intergenic 55.0%
! TCAGTGTGCTGGCACTCTTC+TGG + tig0026186:54611-54630 Msa1427380:CDS 55.0%
CTCTGGGCCATTGGATCTGA+TGG + tig0026186:54671-54690 Msa1427380:CDS 55.0%
GCCATTGGATCTGATGGCAG+CGG + tig0026186:54677-54696 Msa1427380:CDS 55.0%
CCATTGGATCTGATGGCAGC+GGG + tig0026186:54678-54697 Msa1427380:CDS 55.0%
CATTGGATCTGATGGCAGCG+GGG + tig0026186:54679-54698 Msa1427380:CDS 55.0%
ACCCGGTTCTGCCTCACCAT+AGG - tig0026186:49073-49092 None:intergenic 60.0%
CTCGTTTGGAAGCTGACCGC+GGG - tig0026186:49299-49318 None:intergenic 60.0%
CCTCGTTTGGAAGCTGACCG+CGG - tig0026186:49300-49319 None:intergenic 60.0%
GGAATGTCACGCCAGCCAAC+AGG - tig0026186:50764-50783 None:intergenic 60.0%
CCCGCTGCCATCAGATCCAA+TGG - tig0026186:54681-54700 None:intergenic 60.0%
CCGCGGTCAGCTTCCAAACG+AGG + tig0026186:49297-49316 Msa1427380:CDS 65.0%
TTGGAAGGGGGAAGGGAGGG+TGG - tig0026186:52673-52692 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0026186 gene 47285 55255 47285 ID=Msa1427380;Name=Msa1427380
tig0026186 mRNA 47285 55255 47285 ID=Msa1427380-mRNA-1;Parent=Msa1427380;Name=Msa1427380-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.37|0.29|1|1|1|17|218|771
tig0026186 exon 47285 47378 47285 ID=Msa1427380-mRNA-1:exon:5384;Parent=Msa1427380-mRNA-1
tig0026186 exon 47963 48052 47963 ID=Msa1427380-mRNA-1:exon:5385;Parent=Msa1427380-mRNA-1
tig0026186 exon 48163 48272 48163 ID=Msa1427380-mRNA-1:exon:5386;Parent=Msa1427380-mRNA-1
tig0026186 exon 48932 49180 48932 ID=Msa1427380-mRNA-1:exon:5387;Parent=Msa1427380-mRNA-1
tig0026186 exon 49280 49374 49280 ID=Msa1427380-mRNA-1:exon:5388;Parent=Msa1427380-mRNA-1
tig0026186 exon 49490 49574 49490 ID=Msa1427380-mRNA-1:exon:5389;Parent=Msa1427380-mRNA-1
tig0026186 exon 49670 49745 49670 ID=Msa1427380-mRNA-1:exon:5390;Parent=Msa1427380-mRNA-1
tig0026186 exon 50655 50704 50655 ID=Msa1427380-mRNA-1:exon:5391;Parent=Msa1427380-mRNA-1
tig0026186 exon 51545 51844 51545 ID=Msa1427380-mRNA-1:exon:5392;Parent=Msa1427380-mRNA-1
tig0026186 exon 51982 52173 51982 ID=Msa1427380-mRNA-1:exon:5393;Parent=Msa1427380-mRNA-1
tig0026186 exon 52541 52640 52541 ID=Msa1427380-mRNA-1:exon:5394;Parent=Msa1427380-mRNA-1
tig0026186 exon 52791 52900 52791 ID=Msa1427380-mRNA-1:exon:5395;Parent=Msa1427380-mRNA-1
tig0026186 exon 53028 53177 53028 ID=Msa1427380-mRNA-1:exon:5396;Parent=Msa1427380-mRNA-1
tig0026186 exon 53922 54071 53922 ID=Msa1427380-mRNA-1:exon:5397;Parent=Msa1427380-mRNA-1
tig0026186 exon 54164 54280 54164 ID=Msa1427380-mRNA-1:exon:5398;Parent=Msa1427380-mRNA-1
tig0026186 exon 54590 54793 54590 ID=Msa1427380-mRNA-1:exon:5399;Parent=Msa1427380-mRNA-1
tig0026186 exon 54894 55255 54894 ID=Msa1427380-mRNA-1:exon:5400;Parent=Msa1427380-mRNA-1
tig0026186 CDS 47285 47378 47285 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 47963 48052 47963 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 48163 48272 48163 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 48932 49180 48932 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 49280 49374 49280 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 49490 49574 49490 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 49670 49745 49670 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 50655 50704 50655 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 51545 51844 51545 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 51982 52173 51982 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 52541 52640 52541 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 52791 52900 52791 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 53028 53177 53028 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 53922 54071 53922 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 54164 54280 54164 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 54590 54793 54590 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 CDS 54894 55037 54894 ID=Msa1427380-mRNA-1:cds;Parent=Msa1427380-mRNA-1
tig0026186 three_prime_UTR 55038 55255 55038 ID=Msa1427380-mRNA-1:three_prime_utr;Parent=Msa1427380-mRNA-1
Gene Sequence

>Msa1427380

ATGTCTCAATCCAAATGCGATGAACCTGATAAAGCGTATGAAATCGCTGAACTCATCGCCATTTTTGTTACCTTGTCTTTGTTCCTTTTTCTTCATGCTTTTATCTACGATTACCTCATGAAGAATCAATTGTATGAAACTGCAAGAATATTTCATGATGAAGGCAATGTTGAACAGAATATTGTTATGGATGCACCTGGTTGTTCTCTCTTCGAGTGGTGGTCTGTTTTCTGGGAATTGTTTATGGCCAAACAAGGTTTTTCACTCTCAGAACCAGCATTATCTTACCTTAAGGCTCAAGAAATGCGGAAGCAAGAAGAAGAGATAGAAAAAATCCAGTTCATATTGCAGAGCCCTGCTCAGCTGCAGCAATATGGGGCTGAAACTCAAGAAGGTGTTAATGCCAATGTTCTCTGTCCCATAAACAATGCTCCTATGGTGAGGCAGAACCGGGTTACTTCTAATACAATGGCAACAAAACTAAATGAGGACAGGTTGAAGACTCCCCTTCAGGGAAATGCTTTTGATGACAGGACCTTTAAGATAATGAATGCTTATACCCGCGGTCAGCTTCCAAACGAGGATTGTGCCTTGTTGTTGAACGAAATAGCACCAATAACTGGTGGACAGCCTTCAGGACAAACATTGGCCAGTGCACTTAGCATTTTACAAGAGAAACTTCAACAGGATCAAAATCAAAACCAGCAACTTCCAGGGTTACAAGCCATGCACAGTGGCATGAGTGCAATGATGAGGTCTCAAGCTGTTGTTTCAGAAGGATCCATTTACAGTGTTCATGGTTCAAATCAAGGTGGTAGCGACTTGACTCTGAAAGGGTGGCCTTTAGCAGGATTGGATGAGCATCATGCGGAACTTCTTCATAAGCATAATTTGATTCTGCCTTCACAATCTTCCAATCAATTTTCACCACGGCAGCAACTTATGTTTCAGGCACAGCAGGATTTAGTTAATCCATTTGTCAGTGGTTTTGATGGCAAAAGACCAAGTTTGCTTGTCCATAATCAAAATATGGTTCCTTGGAACGATGGCCAATCAAATTCTGTAGGTGGTTCCATTCCCAATATTGTAACACCTGCACAAATTGGTTTCCCTGAATTGCCTCATCTGGACTTAGATATGACCCATAAGGCTTCCAAAAGTCAAGTTGACCGGAAGCAAAAACGAAAAGTAGGATCAAGTTCAGGTCTTGCCAATAGCTCTGGAACTGCAAACACAATGGGATCATCTTCTGGTTCACCCTCTACACCAACTATGCAGACACGACTGCCAACTTGGCAACAGAATGGTTTCGGCTCACTTGCATCAACACAGAATCAATTGGCTCATATGGACCATCTCAAGAGCAACGGATCTTTGGCGGACAATTTTGAGTTACTCTCATCTCTTGCTGATTCAGACCATAATGGACGAGTTGACCAAGGATTCTCATTTAATGAGATCAAGCATGGATTGGCTAGTTCAGATAAAGTTGACTGTTGTCACTTCTCCTCGGATGGAAAACTATTTGTTACTGGTGGTCGTGATAAAAAGGCTTCTCTATGGTGCACAAAATTGTTCAACCTGAAATCTACGCTTGAAGAGCACACTCAACGGATAACTGATGTTAGATTTAGCCCAAGCATGTTCTATGTTGCTACGTCCTCAGCCGATAAAACTGTAAAGGTTTGGGATGTTAATAATGCTGGTCATTCTCTTCGGACATTTACAGGGAATACAGCTGTGCTGTCACTAGACTTTCATCCAAGTAAACGTGGCCTTATTTGTTCTTGTGATAATAAGGAGATAAGATATTGGAATATTGCAAATGGTAGTTGTATTGGGATTTTCAAGGGTGGTGTAACTCAGGTGAGATTTCAACCTGGTTTGGGAAAGGTTCTTGCAGCAGCAGTAAATAATCAAATACTCATGTTTGACGCAGAAACTCTGAGTTGCAGATTTAAATTGCAGGGCCACATGAGCCTTGTTCGTTCAGTGTGCTGGCACTCTTCTGGAAATTATCTGGCATCTGTTTGTAATGATCTGGTTAAACTCTGGGCCATTGGATCTGATGGCAGCGGGGCATGTATTACGCAAGTGAATGCAGCTGAGAGCAAATTCAAGACCTGCGTTTTCCATCCTAGCTACAATATTTTGATCATTTGCTGCAGTGAGTCGCTTATGCTCTGGGACTTTGAGGAGAGCAAAAAACTTATTGTGCCTGCACACGACAAGCTTGTATCTGCATTGGCAGTATCAGATGTTACTGGATTGGTGGCCTCAGTTAGTCATGATAGGACTTTCAAGATCTGGAAGTGA
Protein sequence

>Msa1427380

MSQSKCDEPDKAYEIAELIAIFVTLSLFLFLHAFIYDYLMKNQLYETARIFHDEGNVEQNIVMDAPGCSLFEWWSVFWELFMAKQGFSLSEPALSYLKAQEMRKQEEEIEKIQFILQSPAQLQQYGAETQEGVNANVLCPINNAPMVRQNRVTSNTMATKLNEDRLKTPLQGNAFDDRTFKIMNAYTRGQLPNEDCALLLNEIAPITGGQPSGQTLASALSILQEKLQQDQNQNQQLPGLQAMHSGMSAMMRSQAVVSEGSIYSVHGSNQGGSDLTLKGWPLAGLDEHHAELLHKHNLILPSQSSNQFSPRQQLMFQAQQDLVNPFVSGFDGKRPSLLVHNQNMVPWNDGQSNSVGGSIPNIVTPAQIGFPELPHLDLDMTHKASKSQVDRKQKRKVGSSSGLANSSGTANTMGSSSGSPSTPTMQTRLPTWQQNGFGSLASTQNQLAHMDHLKSNGSLADNFELLSSLADSDHNGRVDQGFSFNEIKHGLASSDKVDCCHFSSDGKLFVTGGRDKKASLWCTKLFNLKSTLEEHTQRITDVRFSPSMFYVATSSADKTVKVWDVNNAGHSLRTFTGNTAVLSLDFHPSKRGLICSCDNKEIRYWNIANGSCIGIFKGGVTQVRFQPGLGKVLAAAVNNQILMFDAETLSCRFKLQGHMSLVRSVCWHSSGNYLASVCNDLVKLWAIGSDGSGACITQVNAAESKFKTCVFHPSYNILIICCSESLMLWDFEESKKLIVPAHDKLVSALAVSDVTGLVASVSHDRTFKIWK*