AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1427530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427530 MtrunA17_Chr2g0297051 93.529 1020 40 3 1 1016 34 1031 0.0 1899
Msa1427530 MtrunA17_Chr4g0052521 79.300 1029 161 9 1 1015 1 991 0.0 1603
Msa1427530 MtrunA17_Chr5g0397621 48.571 910 426 10 95 999 14 886 0.0 822
Msa1427530 MtrunA17_Chr5g0397621 33.333 150 92 2 35 184 34 175 1.39e-14 78.6
Msa1427530 MtrunA17_Chr8g0339181 46.796 983 474 11 28 998 6 951 0.0 800
Msa1427530 MtrunA17_Chr8g0374321 44.530 649 330 10 47 685 59 687 2.33e-176 531
Msa1427530 MtrunA17_Chr8g0374321 26.733 202 129 4 127 312 57 255 1.11e-15 82.0
Msa1427530 MtrunA17_Chr4g0050431 37.703 679 342 17 340 993 285 907 2.02e-119 389
Msa1427530 MtrunA17_Chr3g0136331 35.203 713 397 16 308 998 216 885 1.06e-117 383
Msa1427530 MtrunA17_Chr8g0374331 61.803 233 89 0 766 998 2 234 1.66e-90 289
Msa1427530 MtrunA17_Chr8g0374391 61.233 227 88 0 772 998 1 227 1.37e-86 278
Msa1427530 MtrunA17_Chr2g0297871 32.220 599 330 18 411 1003 22 550 4.39e-74 258
Msa1427530 MtrunA17_Chr4g0071991 30.488 574 326 15 392 957 161 669 1.57e-67 246
Msa1427530 MtrunA17_Chr8g0374371 53.030 198 81 2 425 621 1 187 1.03e-63 215
Msa1427530 MtrunA17_Chr4g0053441 24.932 738 422 22 281 974 121 770 2.46e-39 157
Msa1427530 MtrunA17_Chr8g0382071 23.451 597 367 16 438 954 239 825 8.45e-27 118
Msa1427530 MtrunA17_Chr6g0452721 22.837 578 322 16 439 951 140 658 1.33e-25 114
Msa1427530 MtrunA17_Chr1g0147981 22.318 578 325 17 439 951 155 673 2.40e-24 110
Msa1427530 MtrunA17_Chr5g0401211 23.689 591 341 13 456 956 257 827 2.84e-24 110
Msa1427530 MtrunA17_Chr4g0059961 22.690 617 360 18 439 990 142 706 4.32e-24 109
Msa1427530 MtrunA17_Chr3g0138931 22.020 604 336 16 429 965 132 667 6.88e-24 108
Msa1427530 MtrunA17_Chr4g0072131 23.333 630 356 17 429 990 135 705 1.18e-23 108
Msa1427530 MtrunA17_Chr8g0365021 22.145 578 326 16 439 951 208 726 1.70e-23 107
Msa1427530 MtrunA17_Chr2g0298031 22.204 599 342 15 429 965 137 673 2.55e-23 107
Msa1427530 MtrunA17_Chr1g0148031 21.441 583 334 16 448 965 144 667 1.71e-22 104
Msa1427530 MtrunA17_Chr8g0335291 22.558 563 341 15 439 951 146 663 2.32e-22 103
Msa1427530 MtrunA17_Chr7g0263361 31.795 195 99 4 805 967 625 817 4.43e-21 99.8
Msa1427530 MtrunA17_Chr8g0346461 31.720 186 93 3 800 951 613 798 1.58e-20 98.2
Msa1427530 MtrunA17_Chr7g0276551 25.066 379 224 8 621 951 55 421 2.20e-20 97.1
Msa1427530 MtrunA17_Chr2g0304941 21.579 570 355 13 429 951 133 657 3.47e-20 96.7
Msa1427530 MtrunA17_Chr8g0340261 31.188 202 105 4 789 956 174 375 4.34e-20 95.5
Msa1427530 MtrunA17_Chr6g0456201 30.256 195 103 4 795 956 629 823 1.11e-19 95.1
Msa1427530 MtrunA17_Chr2g0333721 21.565 575 349 15 429 951 130 654 4.30e-19 93.2
Msa1427530 MtrunA17_Chr2g0298871 30.601 183 94 2 805 954 695 877 5.39e-19 93.2
Msa1427530 MtrunA17_Chr4g0020551 30.256 195 107 4 789 954 566 760 1.57e-18 91.3
Msa1427530 MtrunA17_Chr4g0054021 31.844 179 93 3 807 956 572 750 1.74e-18 91.3
Msa1427530 MtrunA17_Chr7g0260401 31.148 183 92 2 806 954 672 854 2.22e-18 91.3
Msa1427530 MtrunA17_Chr3g0134951 28.934 197 102 3 800 958 573 769 1.02e-16 85.5
Msa1427530 MtrunA17_Chr3g0134771 30.899 178 95 3 807 956 652 829 1.10e-16 85.5
Msa1427530 MtrunA17_Chr1g0173111 32.584 178 91 5 806 954 645 822 1.27e-16 85.5
Msa1427530 MtrunA17_Chr4g0002331 28.962 183 97 3 805 954 708 890 2.01e-16 84.7
Msa1427530 MtrunA17_Chr8g0355421 29.461 241 133 8 806 1011 639 877 3.07e-16 84.0
Msa1427530 MtrunA17_Chr8g0381711 21.417 635 352 20 398 936 89 672 4.90e-15 80.1
Msa1427530 MtrunA17_Chr4g0065481 27.273 176 98 1 806 951 482 657 3.20e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427530 AT5G44790.1 69.875 1039 252 8 1 1016 1 1001 0.0 1433
Msa1427530 AT1G63440.1 47.536 974 466 11 34 999 44 980 0.0 858
Msa1427530 AT5G21930.2 35.177 705 384 14 323 996 213 875 1.26e-117 383
Msa1427530 AT5G21930.1 35.177 705 384 14 323 996 213 875 1.26e-117 383
Msa1427530 AT4G33520.2 36.921 669 364 13 339 996 297 918 2.33e-111 367
Msa1427530 AT4G33520.3 36.921 669 364 13 339 996 297 918 4.64e-111 367
Msa1427530 AT5G21930.3 33.759 705 371 15 323 996 213 852 1.46e-105 350
Msa1427530 AT5G21930.4 34.227 634 344 14 323 925 213 804 1.11e-95 322
Msa1427530 AT4G30110.1 27.943 773 419 25 193 947 3 655 1.35e-69 251
Msa1427530 AT4G30110.2 27.943 773 419 25 193 947 3 655 1.35e-69 251
Msa1427530 AT2G19110.2 26.104 770 426 23 198 947 18 664 5.28e-61 227
Msa1427530 AT2G19110.3 26.104 770 426 23 198 947 18 664 5.28e-61 227
Msa1427530 AT2G19110.1 26.104 770 426 23 198 947 18 664 5.28e-61 227
Msa1427530 AT4G30120.2 28.710 411 231 8 393 802 4 353 4.33e-39 150
Msa1427530 AT4G30120.1 25.871 603 339 15 201 802 17 512 4.84e-39 154
Msa1427530 AT4G37270.1 26.518 626 365 18 356 947 181 745 3.40e-35 145
Msa1427530 AT2G41560.1 25.289 605 339 19 439 954 239 819 4.02e-28 123
Msa1427530 AT2G41560.2 25.289 605 339 19 439 954 137 717 4.33e-28 122
Msa1427530 AT2G41560.3 25.289 605 339 19 439 954 137 717 4.33e-28 122
Msa1427530 AT2G41560.4 25.289 605 339 19 439 954 137 717 4.33e-28 122
Msa1427530 AT3G60330.4 23.363 565 332 16 439 951 139 654 1.89e-25 114
Msa1427530 AT3G60330.3 23.363 565 332 16 439 951 139 654 1.89e-25 114
Msa1427530 AT3G60330.2 23.186 565 333 16 439 951 139 654 4.38e-25 113
Msa1427530 AT3G60330.1 23.186 565 333 16 439 951 139 654 4.38e-25 113
Msa1427530 AT2G22950.1 24.407 590 339 14 456 956 257 828 1.46e-24 111
Msa1427530 AT1G17260.1 22.261 566 339 15 439 951 144 661 2.22e-24 110
Msa1427530 AT3G47950.1 22.295 610 371 15 439 990 144 708 2.41e-24 110
Msa1427530 AT3G47950.2 22.295 610 371 15 439 990 144 708 2.41e-24 110
Msa1427530 AT5G62670.1 22.276 624 354 17 439 990 140 704 5.11e-24 109
Msa1427530 AT3G22910.1 24.791 597 351 17 447 956 234 819 7.99e-23 105
Msa1427530 AT2G24520.2 23.643 571 336 14 448 965 187 710 9.31e-23 105
Msa1427530 AT2G24520.3 23.643 571 336 14 448 965 124 647 9.90e-23 105
Msa1427530 AT2G24520.1 23.643 571 336 14 448 965 124 647 9.90e-23 105
Msa1427530 AT4G30190.1 22.435 575 344 16 429 951 130 654 1.44e-22 105
Msa1427530 AT5G57350.4 21.821 582 339 16 429 951 131 655 1.85e-22 104
Msa1427530 AT5G57350.2 21.821 582 339 16 429 951 131 655 1.85e-22 104
Msa1427530 AT5G57350.1 21.821 582 339 16 429 951 131 655 1.85e-22 104
Msa1427530 AT2G18960.1 22.704 577 340 17 429 951 130 654 4.03e-21 100
Msa1427530 AT2G18960.3 22.704 577 340 17 429 951 66 590 4.99e-21 100
Msa1427530 AT2G18960.2 22.704 577 340 17 429 951 66 590 4.99e-21 100
Msa1427530 AT1G80660.2 21.295 587 354 15 427 954 4 541 1.14e-20 98.6
Msa1427530 AT1G07810.1 31.980 197 96 5 805 967 620 812 2.37e-20 97.8
Msa1427530 AT3G57330.2 33.898 177 89 3 806 954 585 761 3.06e-20 97.4
Msa1427530 AT1G07670.2 31.472 197 97 5 805 967 620 812 3.14e-20 97.4
Msa1427530 AT1G07670.1 31.472 197 97 5 805 967 620 812 3.14e-20 97.4
Msa1427530 AT3G57330.1 33.898 177 89 3 806 954 640 816 3.18e-20 97.4
Msa1427530 AT1G80660.4 22.109 588 344 17 429 954 135 670 7.07e-20 96.3
Msa1427530 AT1G80660.3 22.109 588 344 17 429 954 135 670 8.38e-20 95.9
Msa1427530 AT1G80660.1 22.109 588 344 17 429 954 135 670 1.13e-19 95.5
Msa1427530 AT4G00900.2 32.044 181 89 4 805 951 614 794 2.15e-19 94.7
Msa1427530 AT4G00900.1 32.044 181 89 4 805 951 614 794 2.15e-19 94.7
Msa1427530 AT2G07560.1 21.687 581 340 17 429 951 133 656 3.07e-19 94.4
Msa1427530 AT3G42640.1 21.525 590 331 19 429 951 133 657 9.48e-19 92.8
Msa1427530 AT5G57110.1 31.053 190 98 2 798 954 666 855 1.71e-18 92.0
Msa1427530 AT5G57110.3 31.053 190 98 2 798 954 666 855 1.71e-18 92.0
Msa1427530 AT5G57110.2 31.053 190 98 2 798 954 666 855 1.71e-18 92.0
Msa1427530 AT4G29900.1 30.811 185 95 3 803 954 675 859 6.40e-18 90.1
Msa1427530 AT4G29900.2 30.811 185 95 3 803 954 675 859 6.40e-18 90.1
Msa1427530 AT3G63380.1 31.319 182 92 2 806 954 640 821 7.19e-18 89.7
Msa1427530 AT4G37640.1 31.285 179 94 3 807 956 649 827 8.16e-18 89.7
Msa1427530 AT1G10130.1 29.442 197 101 3 800 958 572 768 1.58e-17 88.6
Msa1427530 AT3G21180.1 28.962 183 97 2 805 954 690 872 4.17e-17 87.4
Msa1427530 AT5G57350.3 23.650 389 218 10 621 951 26 393 4.46e-17 87.0
Msa1427530 AT2G24520.4 24.372 398 229 8 621 965 26 404 8.09e-17 85.9
Msa1427530 AT4G30190.2 39.535 86 52 0 866 951 602 687 1.01e-11 69.7

Find 289 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAACTTAGGTTTAATATT+TGG 0.110981 tig0026191:+18531 Msa1427530:three_prime_UTR
CGTAATAAGCTTTAAGAATA+AGG 0.133086 tig0026191:-18577 None:intergenic
CTTCTATATGGTGCTCTTAC+TGG 0.139334 tig0026191:+14400 Msa1427530:CDS
ATAGGTTGTAAACTTCTTTA+TGG 0.153663 tig0026191:+18436 Msa1427530:three_prime_UTR
TTGCTGATTATGTAAGTATT+TGG 0.167508 tig0026191:+15025 Msa1427530:CDS
TCGTTTCATCGTCGGATTCT+AGG 0.208143 tig0026191:-11750 None:intergenic
TCATGGTGGCAACAGGGGTT+GGG 0.233206 tig0026191:+15977 Msa1427530:CDS
TGTTCCTACAGTTGTTTCTT+TGG 0.234961 tig0026191:+15682 Msa1427530:CDS
TATAGAGGGCCTCCAGAAAA+TGG 0.248011 tig0026191:+17378 Msa1427530:CDS
TTGGAAGCCATCCTTGTATA+AGG 0.249440 tig0026191:-13752 None:intergenic
TGTATTGTTGGGGAAGTATT+TGG 0.253276 tig0026191:+14471 Msa1427530:CDS
TCATATGATGATATATTAAT+TGG 0.255812 tig0026191:+17310 Msa1427530:CDS
GAAGATTGGCTTCCAGAAAA+TGG 0.255849 tig0026191:+15865 Msa1427530:CDS
CAACTATGCTTCCGTCCTTT+TGG 0.260061 tig0026191:-17871 None:intergenic
CTACAGATATTGAGAACATT+AGG 0.260373 tig0026191:-15906 None:intergenic
TATAGACGGGAGGCGTATTT+TGG 0.261096 tig0026191:+17074 Msa1427530:CDS
TGAAGTCTCTTCAACATCTT+TGG 0.265988 tig0026191:-13771 None:intergenic
GTCAATGCAATTGAAGATTC+TGG 0.267682 tig0026191:+13476 Msa1427530:CDS
AGGTGAATGCTTCTGTTATT+GGG 0.269615 tig0026191:+14878 Msa1427530:CDS
AAGCTGCCACCATGGGTTTC+TGG 0.278677 tig0026191:+18154 Msa1427530:CDS
ATTTGGGACACGATTCATTA+AGG 0.283457 tig0026191:+18548 Msa1427530:three_prime_UTR
CTGCTGATGGTATTGTTACT+TGG 0.285650 tig0026191:+14797 Msa1427530:CDS
GGGTCTACTATATCTTAGTC+TGG 0.290101 tig0026191:-18245 None:intergenic
CTGATGTTGGCATGGCAATT+GGG 0.291279 tig0026191:+17939 Msa1427530:CDS
CTTATAACATTTGTATTGTT+GGG 0.291354 tig0026191:+14460 Msa1427530:CDS
GCTGATGTTGGCATGGCAAT+TGG 0.295885 tig0026191:+17938 Msa1427530:CDS
TCTGTTTGTGCTCTTCTATA+TGG 0.295905 tig0026191:+14388 Msa1427530:CDS
ATGGTGCTCTTACTGGATTT+TGG 0.296142 tig0026191:+14407 Msa1427530:CDS
TTTCCAGGTCCACTGGATTC+AGG 0.297753 tig0026191:-13272 None:intergenic
GAGGTGAATGCTTCTGTTAT+TGG 0.302365 tig0026191:+14877 Msa1427530:CDS
AAGAGACTTCAACTATATTT+CGG 0.303169 tig0026191:+13783 Msa1427530:CDS
GGCTTTAAGAGCTGATTCTA+TGG 0.303981 tig0026191:-11824 None:intergenic
GTTTCATGTGGAACCTTTCC+AGG 0.310921 tig0026191:-13287 None:intergenic
GGAACTTAGGTTTAATATTT+GGG 0.311577 tig0026191:+18532 Msa1427530:three_prime_UTR
GATACGAGAGAACGTCTTCC+GGG 0.318009 tig0026191:-18047 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 tig0026191:+14459 Msa1427530:CDS
AACAATGGAGTATTAATTAA+AGG 0.326155 tig0026191:+16003 Msa1427530:CDS
AACTTATATCCTTGTTTGAT+AGG 0.330456 tig0026191:+18335 Msa1427530:three_prime_UTR
TTATGGTTACAGGAGATAAT+TGG 0.330574 tig0026191:+17413 Msa1427530:CDS
GTCATACCTGTTATGGTTAC+AGG 0.334204 tig0026191:+17403 Msa1427530:CDS
TTATTAATTATTAATGATAA+AGG 0.335417 tig0026191:+14562 Msa1427530:CDS
TGATACGAGAGAACGTCTTC+CGG 0.339246 tig0026191:-18048 None:intergenic
AGGAAGTTGATGGTGGAAAA+TGG 0.345076 tig0026191:+17214 Msa1427530:CDS
AGCGTTTCCCAATTCCAAAT+TGG 0.346233 tig0026191:-14276 None:intergenic
AAGTTCTACTAATTTCTTGA+TGG 0.346262 tig0026191:-14524 None:intergenic
TTGGTGAGTGCAATCCAATT+TGG 0.349399 tig0026191:+14262 Msa1427530:CDS
ACAGCTGTCATGGTGGCAAC+AGG 0.350623 tig0026191:+15970 Msa1427530:CDS
GTAATAAGCTTTAAGAATAA+GGG 0.351793 tig0026191:-18576 None:intergenic
CACTTGTTTCAAAGTAAGTT+GGG 0.353615 tig0026191:-14432 None:intergenic
CGATGAAACGAGAAGAATTC+AGG 0.357366 tig0026191:+11762 Msa1427530:CDS
AGTGCAATCCAATTTGGAAT+TGG 0.366140 tig0026191:+14268 Msa1427530:CDS
TTATCTCCTGTAACCATAAC+AGG 0.366993 tig0026191:-17409 None:intergenic
CATCTAATTCACTCGATAAC+TGG 0.368702 tig0026191:-13637 None:intergenic
TGTCGACGGCGGCAATCTTC+CGG 0.369334 tig0026191:-11699 None:intergenic
TGCTGATTATGTAAGTATTT+GGG 0.369346 tig0026191:+15026 Msa1427530:CDS
CATGGTGGCAACAGGGGTTG+GGG 0.378197 tig0026191:+15978 Msa1427530:CDS
GAACATTGAACACCTCTTCC+TGG 0.380490 tig0026191:-17051 None:intergenic
GGCCTTTCCTCATGAGTGAT+TGG 0.383881 tig0026191:+14227 Msa1427530:CDS
AATTAATGCAGTACAATTAG+AGG 0.383982 tig0026191:-18628 None:intergenic
ACTTCTTTATGGTTTAGAAT+TGG 0.388580 tig0026191:+18447 Msa1427530:three_prime_UTR
TGCTGATGGTATTGTTACTT+GGG 0.394246 tig0026191:+14798 Msa1427530:CDS
ATAATTAATAAAGCTGTTGC+AGG 0.394832 tig0026191:-14550 None:intergenic
TAACCTCTGCCCTTACATCT+TGG 0.395485 tig0026191:-17814 None:intergenic
TCACAGCCATTCATCTTTCC+CGG 0.395879 tig0026191:+18029 Msa1427530:CDS
TAAAGAAGTTTACAACCTAT+TGG 0.397528 tig0026191:-18433 None:intergenic
TCATGAGTGATTGGTTGAAA+TGG 0.399963 tig0026191:+14236 Msa1427530:CDS
TGGAAGCCATCCTTGTATAA+GGG 0.403119 tig0026191:-13751 None:intergenic
GTCATGGTGGCAACAGGGGT+TGG 0.404160 tig0026191:+15976 Msa1427530:CDS
AATGGGTGTCATACCTGTTA+TGG 0.405396 tig0026191:+17396 Msa1427530:CDS
TCTGAGTCAGATAATAAGTA+TGG 0.405554 tig0026191:+14963 Msa1427530:CDS
TTGTAATTGTAGCTGCCAAT+AGG 0.408332 tig0026191:+18418 Msa1427530:three_prime_UTR
CCTTGTTACTTTGGCGATGC+GGG 0.410794 tig0026191:+14206 Msa1427530:CDS
TAAAAGAGCTGTAGTAGCTT+TGG 0.413563 tig0026191:+13397 Msa1427530:CDS
TGGCTGTGATCACATCTTCC+AGG 0.415350 tig0026191:-18015 None:intergenic
CGAAGCTTCTGTGGTTATAG+AGG 0.416752 tig0026191:+17363 Msa1427530:CDS
ACGCCACTTTCATTTCTTTG+AGG 0.416981 tig0026191:+16957 Msa1427530:CDS
GCACTTGTTTCAAAGTAAGT+TGG 0.417035 tig0026191:-14433 None:intergenic
GTTGGCATGGCAATTGGGGC+TGG 0.420370 tig0026191:+17944 Msa1427530:CDS
GTTGCTATACCAGTTGCAGC+TGG 0.425606 tig0026191:+18106 Msa1427530:CDS
ACAGAAGCTTCGCTCTTTAG+TGG 0.426011 tig0026191:-17352 None:intergenic
TCATGTTTCATGTGGAACTT+AGG 0.431584 tig0026191:+18519 Msa1427530:three_prime_UTR
GTGCAATCCAATTTGGAATT+GGG 0.432590 tig0026191:+14269 Msa1427530:CDS
AAACTTCTGAATGGGAGCTT+TGG 0.433290 tig0026191:-15004 None:intergenic
AGGTATATAGCTGGTTCTAA+TGG 0.433963 tig0026191:+15832 Msa1427530:intron
TTGCTATACCAGTTGCAGCT+GGG 0.439975 tig0026191:+18107 Msa1427530:CDS
TGGTAAATCTATTGAAGAAA+GGG 0.443081 tig0026191:+14711 Msa1427530:CDS
TTATGTACTCCTTGTTACTT+TGG 0.443116 tig0026191:+14197 Msa1427530:CDS
ATCTCATCAACCAAGGTCCT+TGG 0.445220 tig0026191:-13686 None:intergenic
TACAGATATTGAGAACATTA+GGG 0.447465 tig0026191:-15905 None:intergenic
TTTCTGGAAGCCAATCTTCT+GGG 0.448203 tig0026191:-15861 None:intergenic
GTAGCTTTGGCTACTTCGTT+AGG 0.452001 tig0026191:+13410 Msa1427530:CDS
GTCCTCAACAGGTTGGCAAC+AGG 0.454079 tig0026191:+17194 Msa1427530:CDS
TTGAATTACGTATTCGCAAT+GGG 0.456278 tig0026191:+18073 Msa1427530:CDS
TGGAACCTTTCCAGGTCCAC+TGG 0.456514 tig0026191:-13279 None:intergenic
AGGTTGGAATCCAAGATGTA+AGG 0.457732 tig0026191:+17804 Msa1427530:intron
AGAGGCAGCATGTCCTCAAC+AGG 0.460867 tig0026191:+17183 Msa1427530:CDS
ATGGAGCTTACCCAGAAGAT+TGG 0.463545 tig0026191:+15851 Msa1427530:CDS
CGTTGCTAAGCCAAGTGCAC+AGG 0.463737 tig0026191:-15944 None:intergenic
TATAAAACCCCAGCTGCAAC+TGG 0.465834 tig0026191:-18115 None:intergenic
TTCAAGTCCTGTGGTAACAC+TGG 0.466524 tig0026191:-18266 None:intergenic
GCATTCACCTCCTTCAAAAC+AGG 0.467051 tig0026191:-14865 None:intergenic
CGGTAGTTCCCACAGCAATC+AGG 0.467211 tig0026191:-14351 None:intergenic
ATTGTAATAAAATAAAATAA+AGG 0.470258 tig0026191:+18308 Msa1427530:three_prime_UTR
CACATAAAAGCTACTAAAGT+AGG 0.474940 tig0026191:+14928 Msa1427530:CDS
ATTGTCTGTAGGTATATAGC+TGG 0.475760 tig0026191:+15823 Msa1427530:intron
ATGGTAAATCTATTGAAGAA+AGG 0.477332 tig0026191:+14710 Msa1427530:CDS
CTGGAACAAAATGCGCAGAC+AGG 0.477572 tig0026191:+17277 Msa1427530:CDS
GGCATCAGATGTCTTTCCCT+TGG 0.481125 tig0026191:-14503 None:intergenic
GACACATTGAAAGTTCTTCC+TGG 0.482520 tig0026191:+14763 Msa1427530:CDS
TGCTATACCAGTTGCAGCTG+GGG 0.484880 tig0026191:+18108 Msa1427530:CDS
GCATTAGCTGCTGCTGATGT+TGG 0.484928 tig0026191:+17926 Msa1427530:CDS
ACATCAGCAGCAGCTAATGC+TGG 0.485195 tig0026191:-17923 None:intergenic
AGTAACAAGGAGTACATAAA+CGG 0.489713 tig0026191:-14193 None:intergenic
TGGGGAATTTCTTACATTGG+TGG 0.490279 tig0026191:+16143 Msa1427530:CDS
TGATGTTGGCATGGCAATTG+GGG 0.491445 tig0026191:+17940 Msa1427530:CDS
TAATCAGCAAACTTCTGAAT+GGG 0.491787 tig0026191:-15012 None:intergenic
ATAATCAGCAAACTTCTGAA+TGG 0.492086 tig0026191:-15013 None:intergenic
ATTGCATGTCCCTGTGCACT+TGG 0.493058 tig0026191:+15934 Msa1427530:CDS
AGAATTCAGGTGAGGATCAC+CGG 0.494678 tig0026191:+11775 Msa1427530:CDS
AATTCTTCTCGTTTCATCGT+CGG 0.496118 tig0026191:-11758 None:intergenic
ACACAGAATGATGCAAAGTC+TGG 0.498949 tig0026191:+16994 Msa1427530:CDS
CAATGGTGAACTGTCCAACC+AGG 0.500124 tig0026191:-13310 None:intergenic
TAAGACAGGCACTCTAACTC+AGG 0.500738 tig0026191:+16074 Msa1427530:CDS
AGGAGGAGATGCCTTGGAAA+GGG 0.501792 tig0026191:+16023 Msa1427530:CDS
AACAGCTCGCGCTGTTGCAA+AGG 0.502648 tig0026191:+17438 Msa1427530:CDS
AGCTGTAAGTTTCTCACACC+GGG 0.502826 tig0026191:-11658 None:intergenic
ATGGGTTTCTGGTGCATGCA+TGG 0.502854 tig0026191:+18165 Msa1427530:CDS
CTGGTTGGACAGTTCACCAT+TGG 0.504266 tig0026191:+13311 Msa1427530:CDS
GTAAATGAGAGCATGGTAAC+CGG 0.506449 tig0026191:+14832 Msa1427530:CDS
TTCTCTGCTCTCCCAGGAAG+AGG 0.508102 tig0026191:+17039 Msa1427530:CDS
TTTCAATTCTGCTCTTGTCA+AGG 0.509960 tig0026191:+11903 Msa1427530:CDS
GCTTGTGTAAATTCTGTTGA+AGG 0.510394 tig0026191:+13350 Msa1427530:CDS
TTCCTGTTGCCAACCTGTTG+AGG 0.511015 tig0026191:-17196 None:intergenic
TGCCTTGGAAAGGGCTCAGA+TGG 0.512311 tig0026191:+16032 Msa1427530:CDS
CATGAGTGATTGGTTGAAAT+GGG 0.513006 tig0026191:+14237 Msa1427530:CDS
GGTTGGCAACAGGAAGTTGA+TGG 0.514007 tig0026191:+17204 Msa1427530:CDS
TCAGACTTCTCTGCTCTCCC+AGG 0.514157 tig0026191:+17033 Msa1427530:CDS
TATAAATATTTCAACAGAAG+TGG 0.517492 tig0026191:+17237 Msa1427530:CDS
CAATTACAATGGCACACCCT+AGG 0.519343 tig0026191:-18404 None:intergenic
AATTACAATGGCACACCCTA+GGG 0.519413 tig0026191:-18403 None:intergenic
AATTGTTCGCTCATTCCAAA+AGG 0.519479 tig0026191:+17856 Msa1427530:CDS
TTACCTGAATCCAGTGGACC+TGG 0.519629 tig0026191:+13269 Msa1427530:CDS
TTGCATTCCAGTGAATACTT+TGG 0.520202 tig0026191:-16118 None:intergenic
GGTTCCTCTCTTCTTCATGA+AGG 0.520457 tig0026191:+14153 Msa1427530:intron
ATTGAATTACGTATTCGCAA+TGG 0.521857 tig0026191:+18072 Msa1427530:CDS
TACAATTATTTCAAGTCCTG+TGG 0.522286 tig0026191:-18275 None:intergenic
TCATCTTTACTAATTACACT+TGG 0.524240 tig0026191:-13449 None:intergenic
TACATTGGTGGCTTCTGCTG+AGG 0.524768 tig0026191:+16155 Msa1427530:CDS
ACAAACAGAATAAACGTAAG+AGG 0.526322 tig0026191:-14374 None:intergenic
TCAGCTCTTAAAGCCGTTGA+CGG 0.527061 tig0026191:+11832 Msa1427530:CDS
AATTAAAGGAGGAGATGCCT+TGG 0.527932 tig0026191:+16017 Msa1427530:CDS
TTAGTAACATGAAAGGAGTA+AGG 0.528383 tig0026191:+13600 Msa1427530:CDS
CGTCGACAACTCCGATGACT+TGG 0.529876 tig0026191:+11714 Msa1427530:CDS
CGTCTTCCGGGAAAGATGAA+TGG 0.531018 tig0026191:-18035 None:intergenic
ACCTTGGTTGATGAGATCCA+TGG 0.531097 tig0026191:+13692 Msa1427530:CDS
ATAGAGGGCCTCCAGAAAAT+GGG 0.531365 tig0026191:+17379 Msa1427530:CDS
CCTTGGTTGATGAGATCCAT+GGG 0.531879 tig0026191:+13693 Msa1427530:CDS
AAAATGCAATTGAAGATGCA+GGG 0.532728 tig0026191:+13231 Msa1427530:CDS
AGCTCGCGCTGTTGCAAAGG+AGG 0.533453 tig0026191:+17441 Msa1427530:CDS
ATCCTCAAGTTCTCAGTCCA+AGG 0.534011 tig0026191:+13669 Msa1427530:CDS
ATGTTAAAAGCCCTTATACA+AGG 0.536063 tig0026191:+13741 Msa1427530:CDS
ACTACTGCCAAAGTATTCAC+TGG 0.536075 tig0026191:+16111 Msa1427530:CDS
TCCTTGTTACTTTGGCGATG+CGG 0.537993 tig0026191:+14205 Msa1427530:CDS
GAGTACATAAACGGAATATG+AGG 0.538645 tig0026191:-14184 None:intergenic
AGGGCAGAGGTTATGCCTGC+GGG 0.540371 tig0026191:+17824 Msa1427530:CDS
GTTGGACAGTTCACCATTGG+AGG 0.541055 tig0026191:+13314 Msa1427530:CDS
CAAAACAGGTACAGATTCAC+CGG 0.541947 tig0026191:-14851 None:intergenic
GTGTTCAATGTTCTATAGAC+GGG 0.542047 tig0026191:+17061 Msa1427530:CDS
AGCTGCTGCTGATGTTGGCA+TGG 0.542605 tig0026191:+17931 Msa1427530:CDS
AGTTCTCAGTCCAAGGACCT+TGG 0.543432 tig0026191:+13676 Msa1427530:CDS
ACTCACACTAAGACACAGGC+TGG 0.543641 tig0026191:-13816 None:intergenic
ATTTGAAGAGTAAAATGAAG+AGG 0.545198 tig0026191:-11586 None:intergenic
CAGCTGTCATGGTGGCAACA+GGG 0.547379 tig0026191:+15971 Msa1427530:CDS
GTCCTTGGACTGAGAACTTG+AGG 0.548362 tig0026191:-13671 None:intergenic
AACATTGAACACCTCTTCCT+GGG 0.548671 tig0026191:-17050 None:intergenic
GGGTATCAAGCTGCCACCAT+GGG 0.549306 tig0026191:+18147 Msa1427530:CDS
GGCTAGCAGTGAACACCCAC+TGG 0.551474 tig0026191:+16912 Msa1427530:intron
CGGAAGCATAGTTGCAATGG+TGG 0.554423 tig0026191:+17880 Msa1427530:CDS
TGAATCCAGTGGACCTGGAA+AGG 0.555103 tig0026191:+13274 Msa1427530:CDS
GGTGTTCAATGTTCTATAGA+CGG 0.555391 tig0026191:+17060 Msa1427530:CDS
CAGAAGCTTCGCTCTTTAGT+GGG 0.556202 tig0026191:-17351 None:intergenic
AGCAACGCCGACAGCTGTCA+TGG 0.556673 tig0026191:+15960 Msa1427530:CDS
CAGATGTCTTTCCCTTGGCA+AGG 0.557527 tig0026191:-14498 None:intergenic
ATCGGTGTAGTTAGTGAGAG+AGG 0.557592 tig0026191:-11631 None:intergenic
GCTGGAAGGGCTCTTAAGAA+TGG 0.557684 tig0026191:+14310 Msa1427530:CDS
CAAGTAACAATACCATCAGC+AGG 0.557764 tig0026191:-14796 None:intergenic
GGTGAATGCTTCTGTTATTG+GGG 0.558484 tig0026191:+14879 Msa1427530:CDS
ACTTACCATTGCTTTCCCCA+TGG 0.561536 tig0026191:-13709 None:intergenic
AATCCTCAAAGAAATGAAAG+TGG 0.562394 tig0026191:-16960 None:intergenic
GGTCTACTATATCTTAGTCT+GGG 0.564656 tig0026191:-18244 None:intergenic
TAAAAGCCCTTATACAAGGA+TGG 0.565189 tig0026191:+13745 Msa1427530:CDS
AAGGAGGAGATGCCTTGGAA+AGG 0.567028 tig0026191:+16022 Msa1427530:CDS
TCTGAAGAGTTTCTTATCAG+AGG 0.567771 tig0026191:+17165 Msa1427530:intron
CACCATCTGAGCCCTTTCCA+AGG 0.568569 tig0026191:-16034 None:intergenic
GGTTGGAATCCAAGATGTAA+GGG 0.568765 tig0026191:+17805 Msa1427530:intron
GCAAGCGGTGCATGTCATAC+CGG 0.571456 tig0026191:-11794 None:intergenic
ACTAAAGAGCGAAGCTTCTG+TGG 0.573393 tig0026191:+17354 Msa1427530:CDS
TCGGTGTAGTTAGTGAGAGA+GGG 0.573855 tig0026191:-11630 None:intergenic
GTTTGTACAGAGCAACGAGC+AGG 0.574562 tig0026191:+13511 Msa1427530:CDS
TCACTAATTTACTCGCCGGC+CGG 0.575223 tig0026191:+11680 Msa1427530:CDS
TTATAACATTTGTATTGTTG+GGG 0.578808 tig0026191:+14461 Msa1427530:CDS
CCCGCATCGCCAAAGTAACA+AGG 0.579119 tig0026191:-14206 None:intergenic
GATTCCTTGCTTATTCAACC+TGG 0.579145 tig0026191:+14739 Msa1427530:CDS
GTTGCCACCATGACAGCTGT+CGG 0.579194 tig0026191:-15967 None:intergenic
ACAGGGGTTGGGGCTAACAA+TGG 0.579926 tig0026191:+15988 Msa1427530:CDS
AGCTGTCATGGTGGCAACAG+GGG 0.580449 tig0026191:+15972 Msa1427530:CDS
AAATACTCACACTAAGACAC+AGG 0.580595 tig0026191:-13820 None:intergenic
TACTTTGGCAGTAGTAACAC+TGG 0.581825 tig0026191:-16103 None:intergenic
CTAACTACACCGATGGCCCC+CGG 0.585025 tig0026191:+11640 Msa1427530:exon
TCAGCAGGAATCTTCGTACC+AGG 0.585900 tig0026191:-14781 None:intergenic
AGCACTGAGAACACCGTCAA+CGG 0.587580 tig0026191:-11845 None:intergenic
AATGGAGTATTAATTAAAGG+AGG 0.588750 tig0026191:+16006 Msa1427530:CDS
ATTAATGCAGTACAATTAGA+GGG 0.589420 tig0026191:-18627 None:intergenic
ATAGTTGCAATGGTGGGCGA+TGG 0.590360 tig0026191:+17887 Msa1427530:CDS
AGAACTTTCAATGTGTCACC+AGG 0.590713 tig0026191:-14757 None:intergenic
ACGTGGGGAATTTCTTACAT+TGG 0.591618 tig0026191:+16140 Msa1427530:CDS
GACGGCGGCAATCTTCCGGC+CGG 0.592254 tig0026191:-11695 None:intergenic
TAAGAATGGTTCAACAAACA+TGG 0.592476 tig0026191:+14324 Msa1427530:CDS
TGCACATGTCATACCTCCAA+TGG 0.592787 tig0026191:-13327 None:intergenic
CAAGTCATCGGAGTTGTCGA+CGG 0.593143 tig0026191:-11713 None:intergenic
AGAATGATGCAAAGTCTGGA+TGG 0.595281 tig0026191:+16998 Msa1427530:CDS
GTTCGCTCATTCCAAAAGGA+CGG 0.595295 tig0026191:+17860 Msa1427530:CDS
TATGTGATATTTGATAAGAC+AGG 0.596826 tig0026191:+16060 Msa1427530:CDS
TGATTGGTTGAAATGGGCAT+TGG 0.598590 tig0026191:+14243 Msa1427530:CDS
GTCACCAGGTTGAATAAGCA+AGG 0.601865 tig0026191:-14743 None:intergenic
TTCTATGGAATTAGAGCAAG+CGG 0.604370 tig0026191:-11809 None:intergenic
GGCATGCTTAGTAACATGAA+AGG 0.604669 tig0026191:+13593 Msa1427530:CDS
GCTGATGGTATTGTTACTTG+GGG 0.605442 tig0026191:+14799 Msa1427530:CDS
ACTTGTTTCAAAGTAAGTTG+GGG 0.605664 tig0026191:-14431 None:intergenic
AACCAATCACTCATGAGGAA+AGG 0.606404 tig0026191:-14229 None:intergenic
CAGCTCACTAATTTACTCGC+CGG 0.606625 tig0026191:+11676 Msa1427530:CDS
GTATTTGGAAGTCCTTGCCA+AGG 0.607829 tig0026191:+14486 Msa1427530:CDS
TGGAACAAAATGCGCAGACA+GGG 0.609103 tig0026191:+17278 Msa1427530:CDS
CCGATGACTTGGAAGACGTA+CGG 0.609730 tig0026191:+11725 Msa1427530:CDS
GGACGGAAGCATAGTTGCAA+TGG 0.610434 tig0026191:+17877 Msa1427530:CDS
TGGGTATCAAGCTGCCACCA+TGG 0.610764 tig0026191:+18146 Msa1427530:CDS
GTGAATGCTTCTGTTATTGG+GGG 0.611254 tig0026191:+14880 Msa1427530:CDS
TCAAGTCCTGTGGTAACACT+GGG 0.611496 tig0026191:-18265 None:intergenic
GGTACGAAGATTCCTGCTGA+TGG 0.611924 tig0026191:+14784 Msa1427530:CDS
AAGTTATGTAAATGAGAGCA+TGG 0.614544 tig0026191:+14825 Msa1427530:CDS
TATTCACTGGAATGCAACGT+GGG 0.615224 tig0026191:+16124 Msa1427530:CDS
GAAGCTTCTGTGGTTATAGA+GGG 0.616118 tig0026191:+17364 Msa1427530:CDS
CCGTACGTCTTCCAAGTCAT+CGG 0.617854 tig0026191:-11725 None:intergenic
GTTGCTAAGCCAAGTGCACA+GGG 0.619674 tig0026191:-15943 None:intergenic
CTCGTTGCTCTGTACAAACG+AGG 0.621924 tig0026191:-13507 None:intergenic
GAAACTTGTCATGTTTCATG+TGG 0.622815 tig0026191:+18511 Msa1427530:three_prime_UTR
GCAGCATGTCCTCAACAGGT+TGG 0.623209 tig0026191:+17187 Msa1427530:CDS
GAGATCCATGGGGAAAGCAA+TGG 0.623410 tig0026191:+13704 Msa1427530:CDS
AATCCAAGATGTAAGGGCAG+AGG 0.624772 tig0026191:+17811 Msa1427530:CDS
CGGTGTAGTTAGTGAGAGAG+GGG 0.625511 tig0026191:-11629 None:intergenic
GAGCTGTAAGTTTCTCACAC+CGG 0.626143 tig0026191:-11659 None:intergenic
AAAGGTTCCACATGAAACCC+TGG 0.628643 tig0026191:+13292 Msa1427530:CDS
TCTGTTCTGAAGCAAAGCAA+CGG 0.634655 tig0026191:-11869 None:intergenic
GGAAGCATAGTTGCAATGGT+GGG 0.635615 tig0026191:+17881 Msa1427530:CDS
GTTCCACATGAAACCCTGGT+TGG 0.639389 tig0026191:+13296 Msa1427530:CDS
TGGCAACAGGAAGTTGATGG+TGG 0.640700 tig0026191:+17207 Msa1427530:CDS
TCTCTCACTAACTACACCGA+TGG 0.643036 tig0026191:+11633 Msa1427530:exon
GGCAGCTTGATACCCAGTGA+AGG 0.643167 tig0026191:-18139 None:intergenic
TATTTGGAAGTCCTTGCCAA+GGG 0.645878 tig0026191:+14487 Msa1427530:CDS
ACTACCTTCATGAAGAAGAG+AGG 0.646937 tig0026191:-14157 None:intergenic
AAGACAGGCACTCTAACTCA+GGG 0.648271 tig0026191:+16075 Msa1427530:CDS
AAGGGCAGAGGTTATGCCTG+CGG 0.649482 tig0026191:+17823 Msa1427530:CDS
TTCAATGTTCTATAGACGGG+AGG 0.652800 tig0026191:+17064 Msa1427530:CDS
AGTAGACCCAGTGTTACCAC+AGG 0.654154 tig0026191:+18259 Msa1427530:CDS
TGTCCAACCAGGGTTTCATG+TGG 0.654439 tig0026191:-13299 None:intergenic
ATTTCAACCAATCACTCATG+AGG 0.654594 tig0026191:-14234 None:intergenic
GTCATCGGAGTTGTCGACGG+CGG 0.656029 tig0026191:-11710 None:intergenic
AAACGAGAAGAATTCAGGTG+AGG 0.660984 tig0026191:+11767 Msa1427530:CDS
GAAATATTACCTGAATCCAG+TGG 0.667145 tig0026191:+13263 Msa1427530:CDS
AATGCCAAAGAAACAACTGT+AGG 0.667189 tig0026191:-15686 None:intergenic
CCCATGGATCTCATCAACCA+AGG 0.667882 tig0026191:-13693 None:intergenic
ATGGATGTCCTGATTGCTGT+GGG 0.668290 tig0026191:+14343 Msa1427530:CDS
CATGGATGTCCTGATTGCTG+TGG 0.669225 tig0026191:+14342 Msa1427530:CDS
TTACAAGTTCCTATCAAACA+AGG 0.671279 tig0026191:-18344 None:intergenic
ATGCATGCACCAGAAACCCA+TGG 0.671512 tig0026191:-18163 None:intergenic
AATGGTGAACTGTCCAACCA+GGG 0.673911 tig0026191:-13309 None:intergenic
AACGCCGACAGCTGTCATGG+TGG 0.674443 tig0026191:+15963 Msa1427530:CDS
ATTGGCAGCTACAATTACAA+TGG 0.675985 tig0026191:-18415 None:intergenic
AACAGAATAAACGTAAGAGG+CGG 0.676601 tig0026191:-14371 None:intergenic
TTACAATGGCACACCCTAGG+GGG 0.677047 tig0026191:-18401 None:intergenic
GTATAGTTTAACAGACACAC+AGG 0.686331 tig0026191:+13562 Msa1427530:CDS
CTGTAAGTTTCTCACACCGG+GGG 0.694978 tig0026191:-11656 None:intergenic
ATTACAATGGCACACCCTAG+GGG 0.696951 tig0026191:-18402 None:intergenic
GTATTCACTGGAATGCAACG+TGG 0.699644 tig0026191:+16123 Msa1427530:CDS
GGTGTAGTTAGTGAGAGAGG+GGG 0.705140 tig0026191:-11628 None:intergenic
GCTGTAAGTTTCTCACACCG+GGG 0.715129 tig0026191:-11657 None:intergenic
ATTCACTGGAATGCAACGTG+GGG 0.719609 tig0026191:+16125 Msa1427530:CDS
CTTGGTTGATGAGATCCATG+GGG 0.772701 tig0026191:+13694 Msa1427530:CDS
CATGCACCAGAAACCCATGG+TGG 0.775192 tig0026191:-18160 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTTATTTATTAAATG+AGG - tig0026191:15380-15399 None:intergenic 10.0%
!! ATATTAATGTATAGATATAT+GGG - tig0026191:16457-16476 None:intergenic 10.0%
!! AATATTAATGTATAGATATA+TGG - tig0026191:16458-16477 None:intergenic 10.0%
!!! TAATATTTTGATTGAATATT+TGG + tig0026191:16471-16490 Msa1427530:intron 10.0%
!!! ATAAGAAATTAACTTAATTT+TGG - tig0026191:16863-16882 None:intergenic 10.0%
!!! TTTGTTTATTTTTATAATTC+AGG + tig0026191:16891-16910 Msa1427530:intron 10.0%
!!! ACATTTTGACATAATATTAT+AGG + tig0026191:12578-12597 Msa1427530:intron 15.0%
!! ATTAATATATTTCTTGAATG+GGG - tig0026191:13119-13138 None:intergenic 15.0%
!! CATTAATATATTTCTTGAAT+GGG - tig0026191:13120-13139 None:intergenic 15.0%
!! ACATTAATATATTTCTTGAA+TGG - tig0026191:13121-13140 None:intergenic 15.0%
!! TAATTTACACAATAATCTTA+TGG + tig0026191:13852-13871 Msa1427530:intron 15.0%
!! AAATCTTAATAACAATTAAG+TGG - tig0026191:15228-15247 None:intergenic 15.0%
!! TCATATGATGATATATTAAT+TGG + tig0026191:17310-17329 Msa1427530:CDS 15.0%
!!! ATATATTAATTGGAGTTTTA+GGG + tig0026191:17320-17339 Msa1427530:CDS 15.0%
!!! TGATGATAAATTTAAAATTC+TGG - tig0026191:17629-17648 None:intergenic 15.0%
!!! GGTGATATAAAAGAATATTT+TGG + tig0026191:12415-12434 Msa1427530:intron 20.0%
!!! TAAAAGAATATTTTGGAAAG+TGG + tig0026191:12422-12441 Msa1427530:intron 20.0%
!!! AAAAGAATATTTTGGAAAGT+GGG + tig0026191:12423-12442 Msa1427530:intron 20.0%
!! TAATATTATAGGATAGCATT+AGG + tig0026191:12589-12608 Msa1427530:intron 20.0%
!! GTATATAGATAATATGAATG+TGG - tig0026191:12779-12798 None:intergenic 20.0%
!! AATATGCACAAAAAATAGTA+CGG - tig0026191:12893-12912 None:intergenic 20.0%
!! CAAATAATATCTTTCTTGAA+TGG + tig0026191:12973-12992 Msa1427530:intron 20.0%
!! TTCAATTAATATATGAGACA+AGG - tig0026191:13038-13057 None:intergenic 20.0%
!!! AAAATTATTTTTGGAGTTGT+TGG + tig0026191:13536-13555 Msa1427530:CDS 20.0%
!!! TTATACTTCCTTTTTGTTTT+TGG + tig0026191:13880-13899 Msa1427530:intron 20.0%
!! TTAATTGTTATCCTCAAATT+AGG + tig0026191:14021-14040 Msa1427530:intron 20.0%
!! ACAAGAACATAAAAAACATA+AGG - tig0026191:14094-14113 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG + tig0026191:14460-14479 Msa1427530:CDS 20.0%
!! TTATAACATTTGTATTGTTG+GGG + tig0026191:14461-14480 Msa1427530:CDS 20.0%
!! AATAATATCAACTAGTTGAT+TGG + tig0026191:15585-15604 Msa1427530:intron 20.0%
!! CGATATTGAAAGATAAAATT+GGG - tig0026191:15799-15818 None:intergenic 20.0%
!! TCGATATTGAAAGATAAAAT+TGG - tig0026191:15800-15819 None:intergenic 20.0%
!!! AACAATGGAGTATTAATTAA+AGG + tig0026191:16003-16022 Msa1427530:CDS 20.0%
!! ACAATTTAATCAAAGATTAC+AGG + tig0026191:16640-16659 Msa1427530:intron 20.0%
!! TAACTCATATTTACTGATAA+GGG - tig0026191:16721-16740 None:intergenic 20.0%
!! ATAACTCATATTTACTGATA+AGG - tig0026191:16722-16741 None:intergenic 20.0%
!! TATAAATATTTCAACAGAAG+TGG + tig0026191:17237-17256 Msa1427530:CDS 20.0%
!!! GATATATTAATTGGAGTTTT+AGG + tig0026191:17319-17338 Msa1427530:CDS 20.0%
!!! TATATTAATTGGAGTTTTAG+GGG + tig0026191:17321-17340 Msa1427530:CDS 20.0%
!!! ATCAACTTTTCTTTTTATGT+TGG + tig0026191:17479-17498 Msa1427530:intron 20.0%
!!! CCAATATTTTTTCTTTTACA+TGG - tig0026191:17702-17721 None:intergenic 20.0%
!! CCATGTAAAAGAAAAAATAT+TGG + tig0026191:17699-17718 Msa1427530:intron 20.0%
!!! GTAATAAGCTTTAAGAATAA+GGG - tig0026191:18579-18598 None:intergenic 20.0%
! ATTTGAAGAGTAAAATGAAG+AGG - tig0026191:11589-11608 None:intergenic 25.0%
! ATTATGCTAATGCTAATTCA+AGG - tig0026191:11943-11962 None:intergenic 25.0%
! AATTCTTATGGTACTAACAT+AGG + tig0026191:12071-12090 Msa1427530:intron 25.0%
! GAATTACTAACTTTAGTTAG+AGG - tig0026191:12623-12642 None:intergenic 25.0%
! AGATAATATGAATGTGGATT+TGG - tig0026191:12773-12792 None:intergenic 25.0%
!! TTTGAAACTTATCATATTCC+AGG + tig0026191:13196-13215 Msa1427530:intron 25.0%
! TCATCTTTACTAATTACACT+TGG - tig0026191:13452-13471 None:intergenic 25.0%
!! GAGCAGGATAAAATTATTTT+TGG + tig0026191:13527-13546 Msa1427530:CDS 25.0%
! AAGAGACTTCAACTATATTT+CGG + tig0026191:13783-13802 Msa1427530:CDS 25.0%
! AAGGAATACCAAAAACAAAA+AGG - tig0026191:13891-13910 None:intergenic 25.0%
!!! TTTAGCTTGATACATTTATC+AGG + tig0026191:14132-14151 Msa1427530:intron 25.0%
! GCTTATAACATTTGTATTGT+TGG + tig0026191:14459-14478 Msa1427530:CDS 25.0%
! AAGTTCTACTAATTTCTTGA+TGG - tig0026191:14527-14546 None:intergenic 25.0%
! ATAATTAATAAAGCTGTTGC+AGG - tig0026191:14553-14572 None:intergenic 25.0%
!!! TGCTTTTTGTCTTAATCATA+AGG + tig0026191:14606-14625 Msa1427530:intron 25.0%
!! GGCTTGTTTATCAAAAAATT+TGG + tig0026191:14637-14656 Msa1427530:intron 25.0%
!!! AACTATATCGATTTTCTAGA+TGG + tig0026191:14691-14710 Msa1427530:intron 25.0%
! ATGGTAAATCTATTGAAGAA+AGG + tig0026191:14710-14729 Msa1427530:CDS 25.0%
! TGGTAAATCTATTGAAGAAA+GGG + tig0026191:14711-14730 Msa1427530:CDS 25.0%
!! TTGCTGATTATGTAAGTATT+TGG + tig0026191:15025-15044 Msa1427530:CDS 25.0%
!! TGCTGATTATGTAAGTATTT+GGG + tig0026191:15026-15045 Msa1427530:CDS 25.0%
!! AAATGTTTCTTGTTTCAAGA+TGG + tig0026191:15180-15199 Msa1427530:intron 25.0%
!! AATTGTTATTAAGATTTCCC+TGG + tig0026191:15231-15250 Msa1427530:intron 25.0%
! ATAATGCTTGTATACATGAA+TGG + tig0026191:15275-15294 Msa1427530:intron 25.0%
!!! GTTCATTATGTTCTAAAAGT+AGG + tig0026191:15545-15564 Msa1427530:intron 25.0%
!!! AATATCGATTTATTGTCTGT+AGG + tig0026191:15812-15831 Msa1427530:intron 25.0%
! TACAGATATTGAGAACATTA+GGG - tig0026191:15908-15927 None:intergenic 25.0%
!! AATGGAGTATTAATTAAAGG+AGG + tig0026191:16006-16025 Msa1427530:CDS 25.0%
! TATGTGATATTTGATAAGAC+AGG + tig0026191:16060-16079 Msa1427530:CDS 25.0%
! GCTAAAAATAAGCTAAATCA+AGG + tig0026191:16412-16431 Msa1427530:intron 25.0%
! ATCAAGGATATATATAAGAG+CGG + tig0026191:16428-16447 Msa1427530:intron 25.0%
!!! GTTGTTATTTACCAACAATA+AGG - tig0026191:16571-16590 None:intergenic 25.0%
!! TATTGTTGGTAAATAACAAC+CGG + tig0026191:16571-16590 Msa1427530:intron 25.0%
! AACTCATATTTACTGATAAG+GGG - tig0026191:16720-16739 None:intergenic 25.0%
!!! AGTACAGCTTTTGAAAATAA+TGG - tig0026191:17533-17552 None:intergenic 25.0%
! ATTAGTCATTATTCACAGTA+GGG - tig0026191:17672-17691 None:intergenic 25.0%
!!! ATGCAAGTTGGTAAATTTTA+TGG + tig0026191:17729-17748 Msa1427530:intron 25.0%
! TGTGTTAATGAAAAATAACC+TGG + tig0026191:17997-18016 Msa1427530:CDS 25.0%
!! AACTTATATCCTTGTTTGAT+AGG + tig0026191:18335-18354 Msa1427530:three_prime_UTR 25.0%
! TAAAGAAGTTTACAACCTAT+TGG - tig0026191:18436-18455 None:intergenic 25.0%
! ATAGGTTGTAAACTTCTTTA+TGG + tig0026191:18436-18455 Msa1427530:three_prime_UTR 25.0%
!! ACTTCTTTATGGTTTAGAAT+TGG + tig0026191:18447-18466 Msa1427530:three_prime_UTR 25.0%
! TGGAACTTAGGTTTAATATT+TGG + tig0026191:18531-18550 Msa1427530:three_prime_UTR 25.0%
! GGAACTTAGGTTTAATATTT+GGG + tig0026191:18532-18551 Msa1427530:three_prime_UTR 25.0%
!!! CGTAATAAGCTTTAAGAATA+AGG - tig0026191:18580-18599 None:intergenic 25.0%
!! ACAATTAGAGGGAAATTTTT+AGG - tig0026191:18619-18638 None:intergenic 25.0%
! ATTAATGCAGTACAATTAGA+GGG - tig0026191:18630-18649 None:intergenic 25.0%
! AATTAATGCAGTACAATTAG+AGG - tig0026191:18631-18650 None:intergenic 25.0%
!!! GCATTCAACTCTTTTTTAGT+CGG - tig0026191:12207-12226 None:intergenic 30.0%
ACAAATTCCAATGTACTTCA+TGG + tig0026191:12312-12331 Msa1427530:intron 30.0%
TTAGTTTCCATGAAGTACAT+TGG - tig0026191:12322-12341 None:intergenic 30.0%
! ATCACCTTTTTCTTTTTGAC+CGG - tig0026191:12401-12420 None:intergenic 30.0%
!! ACCTTTGGTTTGTTAATCAA+TGG - tig0026191:12675-12694 None:intergenic 30.0%
AAACCAAAGGTAGATATTGT+AGG + tig0026191:12684-12703 Msa1427530:intron 30.0%
!! CTCTAAAGTGAGAAAATCAA+GGG - tig0026191:12747-12766 None:intergenic 30.0%
TACATTAATCTGCTAACATG+TGG + tig0026191:12796-12815 Msa1427530:intron 30.0%
TTAATATATGAGACAAGGAC+AGG - tig0026191:13033-13052 None:intergenic 30.0%
ATCTATTGAATACAAGCTTC+TGG - tig0026191:13164-13183 None:intergenic 30.0%
! CATTTTTAATGTCTTCATCC+TGG - tig0026191:13217-13236 None:intergenic 30.0%
AAAAATGCAATTGAAGATGC+AGG + tig0026191:13230-13249 Msa1427530:CDS 30.0%
AAAATGCAATTGAAGATGCA+GGG + tig0026191:13231-13250 Msa1427530:CDS 30.0%
!! GTATTTTGAGAAATCTTCCA+GGG + tig0026191:13372-13391 Msa1427530:CDS 30.0%
!! TATTTTGAGAAATCTTCCAG+GGG + tig0026191:13373-13392 Msa1427530:CDS 30.0%
TTAGTAACATGAAAGGAGTA+AGG + tig0026191:13600-13619 Msa1427530:CDS 30.0%
ATGTTAAAAGCCCTTATACA+AGG + tig0026191:13741-13760 Msa1427530:CDS 30.0%
GACAAGTATTTCCTAATTTG+AGG - tig0026191:14035-14054 None:intergenic 30.0%
! AGTAACAAGGAGTACATAAA+CGG - tig0026191:14196-14215 None:intergenic 30.0%
! TTATGTACTCCTTGTTACTT+TGG + tig0026191:14197-14216 Msa1427530:CDS 30.0%
TAAGAATGGTTCAACAAACA+TGG + tig0026191:14324-14343 Msa1427530:CDS 30.0%
ACAAACAGAATAAACGTAAG+AGG - tig0026191:14377-14396 None:intergenic 30.0%
ACTTGTTTCAAAGTAAGTTG+GGG - tig0026191:14434-14453 None:intergenic 30.0%
CACTTGTTTCAAAGTAAGTT+GGG - tig0026191:14435-14454 None:intergenic 30.0%
CTTAATCATAAGGAGATGAT+TGG + tig0026191:14616-14635 Msa1427530:intron 30.0%
AAGTTATGTAAATGAGAGCA+TGG + tig0026191:14825-14844 Msa1427530:CDS 30.0%
! CTTTAGTAGCTTTTATGTGA+AGG - tig0026191:14927-14946 None:intergenic 30.0%
CACATAAAAGCTACTAAAGT+AGG + tig0026191:14928-14947 Msa1427530:CDS 30.0%
TCTGAGTCAGATAATAAGTA+TGG + tig0026191:14963-14982 Msa1427530:CDS 30.0%
TAATCAGCAAACTTCTGAAT+GGG - tig0026191:15015-15034 None:intergenic 30.0%
ATAATCAGCAAACTTCTGAA+TGG - tig0026191:15016-15035 None:intergenic 30.0%
! TTTCTTGTTTCAAGATGGTA+TGG + tig0026191:15185-15204 Msa1427530:intron 30.0%
ATATATGTCAAGATCTACCA+GGG - tig0026191:15251-15270 None:intergenic 30.0%
TATATATGTCAAGATCTACC+AGG - tig0026191:15252-15271 None:intergenic 30.0%
AAATATACAGCAACAACCAT+TGG - tig0026191:15341-15360 None:intergenic 30.0%
TAAAAAAACACTGAGTAGCT+AGG + tig0026191:15391-15410 Msa1427530:intron 30.0%
TTTGGTTAAGCTTGCATATT+TGG + tig0026191:15457-15476 Msa1427530:intron 30.0%
TTGGTTAAGCTTGCATATTT+GGG + tig0026191:15458-15477 Msa1427530:intron 30.0%
! GATTGGTTCACATATGATAA+AGG + tig0026191:15602-15621 Msa1427530:intron 30.0%
GAAATATTAGATATGAACCC+TGG + tig0026191:15624-15643 Msa1427530:intron 30.0%
! TTTGGCATTGTTGACATTTT+TGG + tig0026191:15700-15719 Msa1427530:CDS 30.0%
! TTGGCATTGTTGACATTTTT+GGG + tig0026191:15701-15720 Msa1427530:CDS 30.0%
!! AAGTTCATCTTAACTGGTTT+TGG + tig0026191:15729-15748 Msa1427530:intron 30.0%
!!! TCTTAACTGGTTTTGGTAAA+TGG + tig0026191:15736-15755 Msa1427530:intron 30.0%
! ACAAAGTGATTTCCATTTTC+TGG - tig0026191:15880-15899 None:intergenic 30.0%
CTACAGATATTGAGAACATT+AGG - tig0026191:15909-15928 None:intergenic 30.0%
GACGACAAGAATAAATGAAA+TGG - tig0026191:16199-16218 None:intergenic 30.0%
TTATTATGCTGACACATATC+TGG + tig0026191:16222-16241 Msa1427530:intron 30.0%
GTTATTTACCAACAATAAGG+TGG - tig0026191:16568-16587 None:intergenic 30.0%
TTCTGTTTATCTTCAGTTTC+CGG - tig0026191:16593-16612 None:intergenic 30.0%
!! AATTCACCCTTCTATTTTAG+AGG + tig0026191:16835-16854 Msa1427530:intron 30.0%
!! TTGGTTCCTCTAAAATAGAA+GGG - tig0026191:16844-16863 None:intergenic 30.0%
!! TTTGGTTCCTCTAAAATAGA+AGG - tig0026191:16845-16864 None:intergenic 30.0%
AATCCTCAAAGAAATGAAAG+TGG - tig0026191:16963-16982 None:intergenic 30.0%
CTATTGTAATATGTCTGTCT+TGG + tig0026191:17110-17129 Msa1427530:intron 30.0%
! AACAGAAGTGGAAAATTTTG+TGG + tig0026191:17249-17268 Msa1427530:CDS 30.0%
TTATGGTTACAGGAGATAAT+TGG + tig0026191:17413-17432 Msa1427530:CDS 30.0%
!!! GCTATTAAAACCTTGTTTTC+TGG + tig0026191:17501-17520 Msa1427530:intron 30.0%
GAAAATCAATATTCCAGATG+TGG - tig0026191:17571-17590 None:intergenic 30.0%
! GATTAGTCATTATTCACAGT+AGG - tig0026191:17673-17692 None:intergenic 30.0%
ATTGAATTACGTATTCGCAA+TGG + tig0026191:18072-18091 Msa1427530:CDS 30.0%
TTGAATTACGTATTCGCAAT+GGG + tig0026191:18073-18092 Msa1427530:CDS 30.0%
! TACAATTATTTCAAGTCCTG+TGG - tig0026191:18278-18297 None:intergenic 30.0%
TTACAAGTTCCTATCAAACA+AGG - tig0026191:18347-18366 None:intergenic 30.0%
!!! AGAGGGAAATTTTTAGGTTT+AGG - tig0026191:18613-18632 None:intergenic 30.0%
AATTCTTCTCGTTTCATCGT+CGG - tig0026191:11761-11780 None:intergenic 35.0%
TTCTATGGAATTAGAGCAAG+CGG - tig0026191:11812-11831 None:intergenic 35.0%
TTTCAATTCTGCTCTTGTCA+AGG + tig0026191:11903-11922 Msa1427530:CDS 35.0%
ACACACTTAGTACTTAGAAG+CGG + tig0026191:12007-12026 Msa1427530:intron 35.0%
CCATAAGAATTCATCATACC+TGG - tig0026191:12062-12081 None:intergenic 35.0%
CCAGGTATGATGAATTCTTA+TGG + tig0026191:12059-12078 Msa1427530:intron 35.0%
!! TGTGTGTGTGTTTTGTTATG+CGG + tig0026191:12145-12164 Msa1427530:intron 35.0%
!!! ACTCTTTTTTAGTCGGAACT+TGG - tig0026191:12200-12219 None:intergenic 35.0%
AAGTACAAATTTGCAGTTCG+CGG - tig0026191:12255-12274 None:intergenic 35.0%
!! TTCGCAAAAGTACCACAAAA+GGG - tig0026191:12283-12302 None:intergenic 35.0%
!! ATTCGCAAAAGTACCACAAA+AGG - tig0026191:12284-12303 None:intergenic 35.0%
! TTTGTGGTACTTTTGCGAAT+TGG + tig0026191:12284-12303 Msa1427530:intron 35.0%
GGTCTCTTGTAAAATAACAC+CGG + tig0026191:12379-12398 Msa1427530:intron 35.0%
AACACCGGTCAAAAAGAAAA+AGG + tig0026191:12394-12413 Msa1427530:intron 35.0%
!! AAAACAAAGAGCACTGAACA+AGG - tig0026191:12525-12544 None:intergenic 35.0%
TATAGGATAGCATTAGGTTC+TGG + tig0026191:12595-12614 Msa1427530:intron 35.0%
! GCCATTGATTAACAAACCAA+AGG + tig0026191:12671-12690 Msa1427530:intron 35.0%
GTACCTACAATATCTACCTT+TGG - tig0026191:12690-12709 None:intergenic 35.0%
!! CCTCTAAAGTGAGAAAATCA+AGG - tig0026191:12748-12767 None:intergenic 35.0%
! CCTTGATTTTCTCACTTTAG+AGG + tig0026191:12745-12764 Msa1427530:intron 35.0%
! ACTTTTGTCGTAGTACCAAT+CGG + tig0026191:12916-12935 Msa1427530:intron 35.0%
ATACAGATGCATGCTAATGA+CGG - tig0026191:13092-13111 None:intergenic 35.0%
GAAATATTACCTGAATCCAG+TGG + tig0026191:13263-13282 Msa1427530:CDS 35.0%
GCTTGTGTAAATTCTGTTGA+AGG + tig0026191:13350-13369 Msa1427530:CDS 35.0%
!! GGTATTTTGAGAAATCTTCC+AGG + tig0026191:13371-13390 Msa1427530:CDS 35.0%
TAAAAGAGCTGTAGTAGCTT+TGG + tig0026191:13397-13416 Msa1427530:CDS 35.0%
GTCAATGCAATTGAAGATTC+TGG + tig0026191:13476-13495 Msa1427530:CDS 35.0%
GTATAGTTTAACAGACACAC+AGG + tig0026191:13562-13581 Msa1427530:CDS 35.0%
!!! ACAGACACACAGGTTTTAAA+AGG + tig0026191:13572-13591 Msa1427530:CDS 35.0%
CATCTAATTCACTCGATAAC+TGG - tig0026191:13640-13659 None:intergenic 35.0%
TAAAAGCCCTTATACAAGGA+TGG + tig0026191:13745-13764 Msa1427530:CDS 35.0%
TGAAGTCTCTTCAACATCTT+TGG - tig0026191:13774-13793 None:intergenic 35.0%
AAATACTCACACTAAGACAC+AGG - tig0026191:13823-13842 None:intergenic 35.0%
CGGTTCATGAATATATGGAA+AGG - tig0026191:13910-13929 None:intergenic 35.0%
GATCACGGTTCATGAATATA+TGG - tig0026191:13915-13934 None:intergenic 35.0%
GAGTACATAAACGGAATATG+AGG - tig0026191:14187-14206 None:intergenic 35.0%
ATTTCAACCAATCACTCATG+AGG - tig0026191:14237-14256 None:intergenic 35.0%
! TCATGAGTGATTGGTTGAAA+TGG + tig0026191:14236-14255 Msa1427530:CDS 35.0%
! CATGAGTGATTGGTTGAAAT+GGG + tig0026191:14237-14256 Msa1427530:CDS 35.0%
! AGTGCAATCCAATTTGGAAT+TGG + tig0026191:14268-14287 Msa1427530:CDS 35.0%
! GTGCAATCCAATTTGGAATT+GGG + tig0026191:14269-14288 Msa1427530:CDS 35.0%
AACAGAATAAACGTAAGAGG+CGG - tig0026191:14374-14393 None:intergenic 35.0%
TCTGTTTGTGCTCTTCTATA+TGG + tig0026191:14388-14407 Msa1427530:CDS 35.0%
GCACTTGTTTCAAAGTAAGT+TGG - tig0026191:14436-14455 None:intergenic 35.0%
!! TGTATTGTTGGGGAAGTATT+TGG + tig0026191:14471-14490 Msa1427530:CDS 35.0%
! TGCTGATGGTATTGTTACTT+GGG + tig0026191:14798-14817 Msa1427530:CDS 35.0%
!! TGAATCTGTACCTGTTTTGA+AGG + tig0026191:14855-14874 Msa1427530:CDS 35.0%
AGGTGAATGCTTCTGTTATT+GGG + tig0026191:14878-14897 Msa1427530:CDS 35.0%
! TTGTTGACCTTCAAGTTCTA+CGG + tig0026191:15055-15074 Msa1427530:intron 35.0%
!! ACAGATGGTAGTTTTACCAA+TGG + tig0026191:15322-15341 Msa1427530:intron 35.0%
TGGTTAAGCTTGCATATTTG+GGG + tig0026191:15459-15478 Msa1427530:intron 35.0%
! ACACCACAATTTTCAGCAAT+CGG - tig0026191:15506-15525 None:intergenic 35.0%
!! TGTTCCTACAGTTGTTTCTT+TGG + tig0026191:15682-15701 Msa1427530:CDS 35.0%
AATGCCAAAGAAACAACTGT+AGG - tig0026191:15689-15708 None:intergenic 35.0%
ATTGTCTGTAGGTATATAGC+TGG + tig0026191:15823-15842 Msa1427530:intron 35.0%
!! AGGTATATAGCTGGTTCTAA+TGG + tig0026191:15832-15851 Msa1427530:intron 35.0%
TTGCATTCCAGTGAATACTT+TGG - tig0026191:16121-16140 None:intergenic 35.0%
TATTGAAATCGAAGTGTGAG+TGG + tig0026191:16375-16394 Msa1427530:intron 35.0%
!!! GCTTATTTTTAGCTGATGTG+AGG - tig0026191:16405-16424 None:intergenic 35.0%
!! CAATAAGGTGGAGTTTGTTA+GGG - tig0026191:16556-16575 None:intergenic 35.0%
! ACAATAAGGTGGAGTTTGTT+AGG - tig0026191:16557-16576 None:intergenic 35.0%
AACAAACTCCACCTTATTGT+TGG + tig0026191:16557-16576 Msa1427530:intron 35.0%
CAGTTATGACATGTTGTCAT+AGG + tig0026191:16751-16770 Msa1427530:intron 35.0%
GTTCTTGCTTGTTTGATTGT+CGG + tig0026191:16809-16828 Msa1427530:intron 35.0%
GGTGTTCAATGTTCTATAGA+CGG + tig0026191:17060-17079 Msa1427530:CDS 35.0%
GTGTTCAATGTTCTATAGAC+GGG + tig0026191:17061-17080 Msa1427530:CDS 35.0%
TCTGAAGAGTTTCTTATCAG+AGG + tig0026191:17165-17184 Msa1427530:intron 35.0%
TTATCTCCTGTAACCATAAC+AGG - tig0026191:17412-17431 None:intergenic 35.0%
ATGGTAGTTACCAGAAAACA+AGG - tig0026191:17514-17533 None:intergenic 35.0%
TAGTATCAACATTCCACATC+TGG + tig0026191:17555-17574 Msa1427530:intron 35.0%
! TGACAAATGTTTTGCATGAC+AGG + tig0026191:17784-17803 Msa1427530:intron 35.0%
! AAATGTTTTGCATGACAGGT+TGG + tig0026191:17788-17807 Msa1427530:intron 35.0%
AATTGTTCGCTCATTCCAAA+AGG + tig0026191:17856-17875 Msa1427530:CDS 35.0%
GGTCTACTATATCTTAGTCT+GGG - tig0026191:18247-18266 None:intergenic 35.0%
ATTGGCAGCTACAATTACAA+TGG - tig0026191:18418-18437 None:intergenic 35.0%
TTGTAATTGTAGCTGCCAAT+AGG + tig0026191:18418-18437 Msa1427530:three_prime_UTR 35.0%
GAAACTTGTCATGTTTCATG+TGG + tig0026191:18511-18530 Msa1427530:three_prime_UTR 35.0%
TCATGTTTCATGTGGAACTT+AGG + tig0026191:18519-18538 Msa1427530:three_prime_UTR 35.0%
! ATTTGGGACACGATTCATTA+AGG + tig0026191:18548-18567 Msa1427530:three_prime_UTR 35.0%
CGATGAAACGAGAAGAATTC+AGG + tig0026191:11762-11781 Msa1427530:CDS 40.0%
AAACGAGAAGAATTCAGGTG+AGG + tig0026191:11767-11786 Msa1427530:CDS 40.0%
!! GGCTTTAAGAGCTGATTCTA+TGG - tig0026191:11827-11846 None:intergenic 40.0%
!! TCTGTTCTGAAGCAAAGCAA+CGG - tig0026191:11872-11891 None:intergenic 40.0%
!! CAAAAGTACCACAAAAGGGT+AGG - tig0026191:12279-12298 None:intergenic 40.0%
CTTCATGGAAACTAACGAAC+CGG + tig0026191:12327-12346 Msa1427530:intron 40.0%
TTCATGGAAACTAACGAACC+GGG + tig0026191:12328-12347 Msa1427530:intron 40.0%
AGACAAGTGAGTGAAGATTG+AGG + tig0026191:12358-12377 Msa1427530:intron 40.0%
!! AGCGGGCTACTATAATTGTT+GGG + tig0026191:12460-12479 Msa1427530:intron 40.0%
! TTTGCCCTTCTCCTATGTTT+TGG + tig0026191:12542-12561 Msa1427530:intron 40.0%
! TTGCCCTTCTCCTATGTTTT+GGG + tig0026191:12543-12562 Msa1427530:intron 40.0%
AGTTACACTGCCCAAAACAT+AGG - tig0026191:12556-12575 None:intergenic 40.0%
ATGGTTGAAGGAAATCCGAT+TGG - tig0026191:12934-12953 None:intergenic 40.0%
TACAGATGCATGCTAATGAC+GGG - tig0026191:13091-13110 None:intergenic 40.0%
GGCATGCTTAGTAACATGAA+AGG + tig0026191:13593-13612 Msa1427530:CDS 40.0%
TGGAAGCCATCCTTGTATAA+GGG - tig0026191:13754-13773 None:intergenic 40.0%
TTGGAAGCCATCCTTGTATA+AGG - tig0026191:13755-13774 None:intergenic 40.0%
TTCATGAACCGTGATCTCTT+TGG + tig0026191:13919-13938 Msa1427530:intron 40.0%
CAAATGCTCCAAAGAGATCA+CGG - tig0026191:13930-13949 None:intergenic 40.0%
ACTACCTTCATGAAGAAGAG+AGG - tig0026191:14160-14179 None:intergenic 40.0%
AACCAATCACTCATGAGGAA+AGG - tig0026191:14232-14251 None:intergenic 40.0%
! TGATTGGTTGAAATGGGCAT+TGG + tig0026191:14243-14262 Msa1427530:CDS 40.0%
TTGGTGAGTGCAATCCAATT+TGG + tig0026191:14262-14281 Msa1427530:CDS 40.0%
AGCGTTTCCCAATTCCAAAT+TGG - tig0026191:14279-14298 None:intergenic 40.0%
! AAACGCTTTTACATTGCAGC+TGG + tig0026191:14292-14311 Msa1427530:CDS 40.0%
! CTTTTACATTGCAGCTGGAA+GGG + tig0026191:14297-14316 Msa1427530:CDS 40.0%
CTTCTATATGGTGCTCTTAC+TGG + tig0026191:14400-14419 Msa1427530:CDS 40.0%
! ATGGTGCTCTTACTGGATTT+TGG + tig0026191:14407-14426 Msa1427530:CDS 40.0%
TATTTGGAAGTCCTTGCCAA+GGG + tig0026191:14487-14506 Msa1427530:CDS 40.0%
GATTCCTTGCTTATTCAACC+TGG + tig0026191:14739-14758 Msa1427530:CDS 40.0%
AGAACTTTCAATGTGTCACC+AGG - tig0026191:14760-14779 None:intergenic 40.0%
GACACATTGAAAGTTCTTCC+TGG + tig0026191:14763-14782 Msa1427530:CDS 40.0%
CAAGTAACAATACCATCAGC+AGG - tig0026191:14799-14818 None:intergenic 40.0%
CTGCTGATGGTATTGTTACT+TGG + tig0026191:14797-14816 Msa1427530:CDS 40.0%
! GCTGATGGTATTGTTACTTG+GGG + tig0026191:14799-14818 Msa1427530:CDS 40.0%
! GTAAATGAGAGCATGGTAAC+CGG + tig0026191:14832-14851 Msa1427530:CDS 40.0%
CAAAACAGGTACAGATTCAC+CGG - tig0026191:14854-14873 None:intergenic 40.0%
!!! ATCTGTACCTGTTTTGAAGG+AGG + tig0026191:14858-14877 Msa1427530:CDS 40.0%
GAGGTGAATGCTTCTGTTAT+TGG + tig0026191:14877-14896 Msa1427530:CDS 40.0%
GGTGAATGCTTCTGTTATTG+GGG + tig0026191:14879-14898 Msa1427530:CDS 40.0%
GTGAATGCTTCTGTTATTGG+GGG + tig0026191:14880-14899 Msa1427530:CDS 40.0%
! GGGGGTACAATAAATTTGCA+TGG + tig0026191:14898-14917 Msa1427530:CDS 40.0%
AAACTTCTGAATGGGAGCTT+TGG - tig0026191:15007-15026 None:intergenic 40.0%
! TGTTGACCTTCAAGTTCTAC+GGG + tig0026191:15056-15075 Msa1427530:intron 40.0%
! CTTTGTTTGTGACTGACAGA+TGG + tig0026191:15307-15326 Msa1427530:intron 40.0%
AGTAGCTAGGAATCAACATG+TGG + tig0026191:15404-15423 Msa1427530:intron 40.0%
CAACATGTGGTCTGAATTCT+TGG + tig0026191:15417-15436 Msa1427530:intron 40.0%
CTTCCGATTGCTGAAAATTG+TGG + tig0026191:15500-15519 Msa1427530:intron 40.0%
!! CATTGTTGACATTTTTGGGC+TGG + tig0026191:15705-15724 Msa1427530:CDS 40.0%
GCTGGTAAGTTCATCTTAAC+TGG + tig0026191:15723-15742 Msa1427530:intron 40.0%
! TTTCTGGAAGCCAATCTTCT+GGG - tig0026191:15864-15883 None:intergenic 40.0%
!! TTTTCTGGAAGCCAATCTTC+TGG - tig0026191:15865-15884 None:intergenic 40.0%
!! GAAGATTGGCTTCCAGAAAA+TGG + tig0026191:15865-15884 Msa1427530:CDS 40.0%
AATTAAAGGAGGAGATGCCT+TGG + tig0026191:16017-16036 Msa1427530:CDS 40.0%
TACTTTGGCAGTAGTAACAC+TGG - tig0026191:16106-16125 None:intergenic 40.0%
! ACTACTGCCAAAGTATTCAC+TGG + tig0026191:16111-16130 Msa1427530:CDS 40.0%
TATTCACTGGAATGCAACGT+GGG + tig0026191:16124-16143 Msa1427530:CDS 40.0%
ACGTGGGGAATTTCTTACAT+TGG + tig0026191:16140-16159 Msa1427530:CDS 40.0%
TGGGGAATTTCTTACATTGG+TGG + tig0026191:16143-16162 Msa1427530:CDS 40.0%
! ACATATCTGGTTCAGAGCTT+AGG + tig0026191:16235-16254 Msa1427530:intron 40.0%
AGTCATCTTTAACTACCCCA+CGG - tig0026191:16268-16287 None:intergenic 40.0%
ATGACATGTTGTCATAGGCA+TGG + tig0026191:16756-16775 Msa1427530:intron 40.0%
!! CTAATACTGCTTTTGCCAGT+GGG - tig0026191:16930-16949 None:intergenic 40.0%
! ACGCCACTTTCATTTCTTTG+AGG + tig0026191:16957-16976 Msa1427530:CDS 40.0%
ACACAGAATGATGCAAAGTC+TGG + tig0026191:16994-17013 Msa1427530:CDS 40.0%
AGAATGATGCAAAGTCTGGA+TGG + tig0026191:16998-17017 Msa1427530:CDS 40.0%
AACATTGAACACCTCTTCCT+GGG - tig0026191:17053-17072 None:intergenic 40.0%
TTCAATGTTCTATAGACGGG+AGG + tig0026191:17064-17083 Msa1427530:CDS 40.0%
!! AGGAAGTTGATGGTGGAAAA+TGG + tig0026191:17214-17233 Msa1427530:CDS 40.0%
! GGAAAATTTTGTGGTTGAGC+TGG + tig0026191:17258-17277 Msa1427530:CDS 40.0%
GAAGCTTCTGTGGTTATAGA+GGG + tig0026191:17364-17383 Msa1427530:CDS 40.0%
! AATGGGTGTCATACCTGTTA+TGG + tig0026191:17396-17415 Msa1427530:CDS 40.0%
GTCATACCTGTTATGGTTAC+AGG + tig0026191:17403-17422 Msa1427530:CDS 40.0%
! ATTGGTGCTTACATGCAAGT+TGG + tig0026191:17717-17736 Msa1427530:intron 40.0%
AGGTTGGAATCCAAGATGTA+AGG + tig0026191:17804-17823 Msa1427530:intron 40.0%
GGTTGGAATCCAAGATGTAA+GGG + tig0026191:17805-17824 Msa1427530:intron 40.0%
!! TGGGGTTTTATATCCTTCAC+TGG + tig0026191:18126-18145 Msa1427530:CDS 40.0%
!! GGGGTTTTATATCCTTCACT+GGG + tig0026191:18127-18146 Msa1427530:CDS 40.0%
GGGTCTACTATATCTTAGTC+TGG - tig0026191:18248-18267 None:intergenic 40.0%
AATTACAATGGCACACCCTA+GGG - tig0026191:18406-18425 None:intergenic 40.0%
TCGGTGTAGTTAGTGAGAGA+GGG - tig0026191:11633-11652 None:intergenic 45.0%
ATCGGTGTAGTTAGTGAGAG+AGG - tig0026191:11634-11653 None:intergenic 45.0%
TCTCTCACTAACTACACCGA+TGG + tig0026191:11633-11652 Msa1427530:exon 45.0%
AGCTGTAAGTTTCTCACACC+GGG - tig0026191:11661-11680 None:intergenic 45.0%
GAGCTGTAAGTTTCTCACAC+CGG - tig0026191:11662-11681 None:intergenic 45.0%
CAGCTCACTAATTTACTCGC+CGG + tig0026191:11676-11695 Msa1427530:CDS 45.0%
TCGTTTCATCGTCGGATTCT+AGG - tig0026191:11753-11772 None:intergenic 45.0%
AGAATTCAGGTGAGGATCAC+CGG + tig0026191:11775-11794 Msa1427530:CDS 45.0%
TCAGCTCTTAAAGCCGTTGA+CGG + tig0026191:11832-11851 Msa1427530:CDS 45.0%
AAGCGGAGAATTGCATTGCA+TGG + tig0026191:12024-12043 Msa1427530:intron 45.0%
AGAATTCATCATACCTGGCG+CGG - tig0026191:12057-12076 None:intergenic 45.0%
! TGTACTTGCCTACCCTTTTG+TGG + tig0026191:12268-12287 Msa1427530:intron 45.0%
!! TGGGCATTAGTTTGTTGCAG+CGG + tig0026191:12442-12461 Msa1427530:intron 45.0%
!! CAGCGGGCTACTATAATTGT+TGG + tig0026191:12459-12478 Msa1427530:intron 45.0%
! GCGGGCTACTATAATTGTTG+GGG + tig0026191:12461-12480 Msa1427530:intron 45.0%
! ATTGTTGGGGTGTCAATGTC+AGG + tig0026191:12474-12493 Msa1427530:intron 45.0%
!! AAAGAGCACTGAACAAGGAG+CGG - tig0026191:12520-12539 None:intergenic 45.0%
CTGCCCAAAACATAGGAGAA+GGG - tig0026191:12549-12568 None:intergenic 45.0%
ACTGCCCAAAACATAGGAGA+AGG - tig0026191:12550-12569 None:intergenic 45.0%
TAGCAGAGTCTGATGGTTGA+AGG - tig0026191:12946-12965 None:intergenic 45.0%
CAAGTAGTAGCAGAGTCTGA+TGG - tig0026191:12953-12972 None:intergenic 45.0%
GTTTCATGTGGAACCTTTCC+AGG - tig0026191:13290-13309 None:intergenic 45.0%
AAAGGTTCCACATGAAACCC+TGG + tig0026191:13292-13311 Msa1427530:CDS 45.0%
AATGGTGAACTGTCCAACCA+GGG - tig0026191:13312-13331 None:intergenic 45.0%
TGCACATGTCATACCTCCAA+TGG - tig0026191:13330-13349 None:intergenic 45.0%
! ACTACAGCTCTTTTAACCCC+TGG - tig0026191:13392-13411 None:intergenic 45.0%
!! GTAGCTTTGGCTACTTCGTT+AGG + tig0026191:13410-13429 Msa1427530:CDS 45.0%
ATCCTCAAGTTCTCAGTCCA+AGG + tig0026191:13669-13688 Msa1427530:CDS 45.0%
ATCTCATCAACCAAGGTCCT+TGG - tig0026191:13689-13708 None:intergenic 45.0%
!! ACCTTGGTTGATGAGATCCA+TGG + tig0026191:13692-13711 Msa1427530:CDS 45.0%
!! CCTTGGTTGATGAGATCCAT+GGG + tig0026191:13693-13712 Msa1427530:CDS 45.0%
!! CTTGGTTGATGAGATCCATG+GGG + tig0026191:13694-13713 Msa1427530:CDS 45.0%
ACTTACCATTGCTTTCCCCA+TGG - tig0026191:13712-13731 None:intergenic 45.0%
GGTTCCTCTCTTCTTCATGA+AGG + tig0026191:14153-14172 Msa1427530:intron 45.0%
!! TCCTTGTTACTTTGGCGATG+CGG + tig0026191:14205-14224 Msa1427530:CDS 45.0%
! GCTTTTACATTGCAGCTGGA+AGG + tig0026191:14296-14315 Msa1427530:CDS 45.0%
ATGGATGTCCTGATTGCTGT+GGG + tig0026191:14343-14362 Msa1427530:CDS 45.0%
GTATTTGGAAGTCCTTGCCA+AGG + tig0026191:14486-14505 Msa1427530:CDS 45.0%
! GTCACCAGGTTGAATAAGCA+AGG - tig0026191:14746-14765 None:intergenic 45.0%
GCATTCACCTCCTTCAAAAC+AGG - tig0026191:14868-14887 None:intergenic 45.0%
GTAACTCCCGTAGAACTTGA+AGG - tig0026191:15065-15084 None:intergenic 45.0%
! ATTCTTGGCTGCTTTGTCTG+CGG + tig0026191:15432-15451 Msa1427530:intron 45.0%
ATGGAGCTTACCCAGAAGAT+TGG + tig0026191:15851-15870 Msa1427530:CDS 45.0%
TAAGACAGGCACTCTAACTC+AGG + tig0026191:16074-16093 Msa1427530:CDS 45.0%
AAGACAGGCACTCTAACTCA+GGG + tig0026191:16075-16094 Msa1427530:CDS 45.0%
GTATTCACTGGAATGCAACG+TGG + tig0026191:16123-16142 Msa1427530:CDS 45.0%
ATTCACTGGAATGCAACGTG+GGG + tig0026191:16125-16144 Msa1427530:CDS 45.0%
TGGTTCAGAGCTTAGGAGTT+AGG + tig0026191:16242-16261 Msa1427530:intron 45.0%
GTTAAGCAGTCTGTGACAAG+AGG - tig0026191:16339-16358 None:intergenic 45.0%
TCAAAGTCTCCTAGTTGTCC+CGG + tig0026191:16496-16515 Msa1427530:intron 45.0%
!! AGGAACAACGGACTAATGAC+CGG - tig0026191:16518-16537 None:intergenic 45.0%
!! TGGAGTTTGTTAGGGAGTTC+GGG - tig0026191:16548-16567 None:intergenic 45.0%
!! GTGGAGTTTGTTAGGGAGTT+CGG - tig0026191:16549-16568 None:intergenic 45.0%
AGTTACTCGAGCATAGCAGA+GGG - tig0026191:16696-16715 None:intergenic 45.0%
!! GCTAATACTGCTTTTGCCAG+TGG - tig0026191:16931-16950 None:intergenic 45.0%
GAACATTGAACACCTCTTCC+TGG - tig0026191:17054-17073 None:intergenic 45.0%
!! TATAGACGGGAGGCGTATTT+TGG + tig0026191:17074-17093 Msa1427530:CDS 45.0%
TGGAACAAAATGCGCAGACA+GGG + tig0026191:17278-17297 Msa1427530:CDS 45.0%
CAGAAGCTTCGCTCTTTAGT+GGG - tig0026191:17354-17373 None:intergenic 45.0%
ACAGAAGCTTCGCTCTTTAG+TGG - tig0026191:17355-17374 None:intergenic 45.0%
ACTAAAGAGCGAAGCTTCTG+TGG + tig0026191:17354-17373 Msa1427530:CDS 45.0%
CGAAGCTTCTGTGGTTATAG+AGG + tig0026191:17363-17382 Msa1427530:CDS 45.0%
TATAGAGGGCCTCCAGAAAA+TGG + tig0026191:17378-17397 Msa1427530:CDS 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG + tig0026191:17379-17398 Msa1427530:CDS 45.0%
! GTATGACACCCATTTTCTGG+AGG - tig0026191:17390-17409 None:intergenic 45.0%
! CAGGTATGACACCCATTTTC+TGG - tig0026191:17393-17412 None:intergenic 45.0%
CACAGTAGGGTGTAAGAAAC+TGG - tig0026191:17659-17678 None:intergenic 45.0%
AATCCAAGATGTAAGGGCAG+AGG + tig0026191:17811-17830 Msa1427530:CDS 45.0%
TAACCTCTGCCCTTACATCT+TGG - tig0026191:17817-17836 None:intergenic 45.0%
! ACAATTTCAGCTTTTCCCGC+AGG - tig0026191:17842-17861 None:intergenic 45.0%
GTTCGCTCATTCCAAAAGGA+CGG + tig0026191:17860-17879 Msa1427530:CDS 45.0%
! CAACTATGCTTCCGTCCTTT+TGG - tig0026191:17874-17893 None:intergenic 45.0%
! GGAAGCATAGTTGCAATGGT+GGG + tig0026191:17881-17900 Msa1427530:CDS 45.0%
CTGATGTTGGCATGGCAATT+GGG + tig0026191:17939-17958 Msa1427530:CDS 45.0%
TGATGTTGGCATGGCAATTG+GGG + tig0026191:17940-17959 Msa1427530:CDS 45.0%
TCACAGCCATTCATCTTTCC+CGG + tig0026191:18029-18048 Msa1427530:CDS 45.0%
TGATACGAGAGAACGTCTTC+CGG - tig0026191:18051-18070 None:intergenic 45.0%
TTGCTATACCAGTTGCAGCT+GGG + tig0026191:18107-18126 Msa1427530:CDS 45.0%
TATAAAACCCCAGCTGCAAC+TGG - tig0026191:18118-18137 None:intergenic 45.0%
TCAAGTCCTGTGGTAACACT+GGG - tig0026191:18268-18287 None:intergenic 45.0%
TTCAAGTCCTGTGGTAACAC+TGG - tig0026191:18269-18288 None:intergenic 45.0%
ATTACAATGGCACACCCTAG+GGG - tig0026191:18405-18424 None:intergenic 45.0%
CAATTACAATGGCACACCCT+AGG - tig0026191:18407-18426 None:intergenic 45.0%
!! TTATTAATTATTAATGATAA+AGG + tig0026191:14562-14581 Msa1427530:CDS 5.0%
!! ATTGTAATAAAATAAAATAA+AGG + tig0026191:18308-18327 Msa1427530:three_prime_UTR 5.0%
GGTGTAGTTAGTGAGAGAGG+GGG - tig0026191:11631-11650 None:intergenic 50.0%
CGGTGTAGTTAGTGAGAGAG+GGG - tig0026191:11632-11651 None:intergenic 50.0%
CTGTAAGTTTCTCACACCGG+GGG - tig0026191:11659-11678 None:intergenic 50.0%
GCTGTAAGTTTCTCACACCG+GGG - tig0026191:11660-11679 None:intergenic 50.0%
TCACTAATTTACTCGCCGGC+CGG + tig0026191:11680-11699 Msa1427530:CDS 50.0%
CAAGTCATCGGAGTTGTCGA+CGG - tig0026191:11716-11735 None:intergenic 50.0%
CCGTACGTCTTCCAAGTCAT+CGG - tig0026191:11728-11747 None:intergenic 50.0%
! CCGATGACTTGGAAGACGTA+CGG + tig0026191:11725-11744 Msa1427530:CDS 50.0%
! AGCACTGAGAACACCGTCAA+CGG - tig0026191:11848-11867 None:intergenic 50.0%
GAATTCATCATACCTGGCGC+GGG - tig0026191:12056-12075 None:intergenic 50.0%
!! GGGCATTAGTTTGTTGCAGC+GGG + tig0026191:12443-12462 Msa1427530:intron 50.0%
!! AAGAGCACTGAACAAGGAGC+GGG - tig0026191:12519-12538 None:intergenic 50.0%
TTACCTGAATCCAGTGGACC+TGG + tig0026191:13269-13288 Msa1427530:CDS 50.0%
TTTCCAGGTCCACTGGATTC+AGG - tig0026191:13275-13294 None:intergenic 50.0%
TGAATCCAGTGGACCTGGAA+AGG + tig0026191:13274-13293 Msa1427530:CDS 50.0%
GTTCCACATGAAACCCTGGT+TGG + tig0026191:13296-13315 Msa1427530:CDS 50.0%
TGTCCAACCAGGGTTTCATG+TGG - tig0026191:13302-13321 None:intergenic 50.0%
CAATGGTGAACTGTCCAACC+AGG - tig0026191:13313-13332 None:intergenic 50.0%
CTGGTTGGACAGTTCACCAT+TGG + tig0026191:13311-13330 Msa1427530:CDS 50.0%
GTTGGACAGTTCACCATTGG+AGG + tig0026191:13314-13333 Msa1427530:CDS 50.0%
CTCGTTGCTCTGTACAAACG+AGG - tig0026191:13510-13529 None:intergenic 50.0%
GTTTGTACAGAGCAACGAGC+AGG + tig0026191:13511-13530 Msa1427530:CDS 50.0%
GTCCTTGGACTGAGAACTTG+AGG - tig0026191:13674-13693 None:intergenic 50.0%
AGTTCTCAGTCCAAGGACCT+TGG + tig0026191:13676-13695 Msa1427530:CDS 50.0%
CCCATGGATCTCATCAACCA+AGG - tig0026191:13696-13715 None:intergenic 50.0%
GAGATCCATGGGGAAAGCAA+TGG + tig0026191:13704-13723 Msa1427530:CDS 50.0%
ACTCACACTAAGACACAGGC+TGG - tig0026191:13819-13838 None:intergenic 50.0%
!! CCTTGTTACTTTGGCGATGC+GGG + tig0026191:14206-14225 Msa1427530:CDS 50.0%
GGCCTTTCCTCATGAGTGAT+TGG + tig0026191:14227-14246 Msa1427530:CDS 50.0%
GCTGGAAGGGCTCTTAAGAA+TGG + tig0026191:14310-14329 Msa1427530:CDS 50.0%
CATGGATGTCCTGATTGCTG+TGG + tig0026191:14342-14361 Msa1427530:CDS 50.0%
CAGATGTCTTTCCCTTGGCA+AGG - tig0026191:14501-14520 None:intergenic 50.0%
GGCATCAGATGTCTTTCCCT+TGG - tig0026191:14506-14525 None:intergenic 50.0%
TCAGCAGGAATCTTCGTACC+AGG - tig0026191:14784-14803 None:intergenic 50.0%
GGTACGAAGATTCCTGCTGA+TGG + tig0026191:14784-14803 Msa1427530:CDS 50.0%
! TTCTTGGCTGCTTTGTCTGC+GGG + tig0026191:15433-15452 Msa1427530:intron 50.0%
ATTGCATGTCCCTGTGCACT+TGG + tig0026191:15934-15953 Msa1427530:CDS 50.0%
GTTGCTAAGCCAAGTGCACA+GGG - tig0026191:15946-15965 None:intergenic 50.0%
AAGGAGGAGATGCCTTGGAA+AGG + tig0026191:16022-16041 Msa1427530:CDS 50.0%
AGGAGGAGATGCCTTGGAAA+GGG + tig0026191:16023-16042 Msa1427530:CDS 50.0%
! TACATTGGTGGCTTCTGCTG+AGG + tig0026191:16155-16174 Msa1427530:CDS 50.0%
CAAGAGGAGGGGAGGAAATA+TGG - tig0026191:16323-16342 None:intergenic 50.0%
AGCAGTCTGTGACAAGAGGA+GGG - tig0026191:16335-16354 None:intergenic 50.0%
AAGCAGTCTGTGACAAGAGG+AGG - tig0026191:16336-16355 None:intergenic 50.0%
GACTAATGACCGGGACAACT+AGG - tig0026191:16508-16527 None:intergenic 50.0%
!! GGAACAACGGACTAATGACC+GGG - tig0026191:16517-16536 None:intergenic 50.0%
GGTCATTAGTCCGTTGTTCC+TGG + tig0026191:16517-16536 Msa1427530:intron 50.0%
!! GGAGTTTGTTAGGGAGTTCG+GGG - tig0026191:16547-16566 None:intergenic 50.0%
CAGTTACTCGAGCATAGCAG+AGG - tig0026191:16697-16716 None:intergenic 50.0%
GTTGTCATAGGCATGGCGTA+AGG + tig0026191:16763-16782 Msa1427530:intron 50.0%
TTCCTGTTGCCAACCTGTTG+AGG - tig0026191:17199-17218 None:intergenic 50.0%
GGTTGGCAACAGGAAGTTGA+TGG + tig0026191:17204-17223 Msa1427530:CDS 50.0%
!! TGGCAACAGGAAGTTGATGG+TGG + tig0026191:17207-17226 Msa1427530:CDS 50.0%
CTGGAACAAAATGCGCAGAC+AGG + tig0026191:17277-17296 Msa1427530:CDS 50.0%
! GGACGGAAGCATAGTTGCAA+TGG + tig0026191:17877-17896 Msa1427530:CDS 50.0%
! CGGAAGCATAGTTGCAATGG+TGG + tig0026191:17880-17899 Msa1427530:CDS 50.0%
!! ATAGTTGCAATGGTGGGCGA+TGG + tig0026191:17887-17906 Msa1427530:CDS 50.0%
ACATCAGCAGCAGCTAATGC+TGG - tig0026191:17926-17945 None:intergenic 50.0%
GCATTAGCTGCTGCTGATGT+TGG + tig0026191:17926-17945 Msa1427530:CDS 50.0%
GCTGATGTTGGCATGGCAAT+TGG + tig0026191:17938-17957 Msa1427530:CDS 50.0%
TGGCTGTGATCACATCTTCC+AGG - tig0026191:18018-18037 None:intergenic 50.0%
CGTCTTCCGGGAAAGATGAA+TGG - tig0026191:18038-18057 None:intergenic 50.0%
GATACGAGAGAACGTCTTCC+GGG - tig0026191:18050-18069 None:intergenic 50.0%
GTTGCTATACCAGTTGCAGC+TGG + tig0026191:18106-18125 Msa1427530:CDS 50.0%
TGCTATACCAGTTGCAGCTG+GGG + tig0026191:18108-18127 Msa1427530:CDS 50.0%
ATGCATGCACCAGAAACCCA+TGG - tig0026191:18166-18185 None:intergenic 50.0%
!! ATGGGTTTCTGGTGCATGCA+TGG + tig0026191:18165-18184 Msa1427530:CDS 50.0%
AGTAGACCCAGTGTTACCAC+AGG + tig0026191:18259-18278 Msa1427530:CDS 50.0%
TTACAATGGCACACCCTAGG+GGG - tig0026191:18404-18423 None:intergenic 50.0%
CGTCGACAACTCCGATGACT+TGG + tig0026191:11714-11733 Msa1427530:CDS 55.0%
GCAAGCGGTGCATGTCATAC+CGG - tig0026191:11797-11816 None:intergenic 55.0%
CTCACTTGTCTCAGTTCGCC+CGG - tig0026191:12349-12368 None:intergenic 55.0%
TGAACAAGGAGCGGGGAAGA+GGG - tig0026191:12511-12530 None:intergenic 55.0%
!! AGAGCACTGAACAAGGAGCG+GGG - tig0026191:12518-12537 None:intergenic 55.0%
TGGAACCTTTCCAGGTCCAC+TGG - tig0026191:13282-13301 None:intergenic 55.0%
CCCGCATCGCCAAAGTAACA+AGG - tig0026191:14209-14228 None:intergenic 55.0%
CGGTAGTTCCCACAGCAATC+AGG - tig0026191:14354-14373 None:intergenic 55.0%
! GCTGCTTTGTCTGCGGGATT+TGG + tig0026191:15439-15458 Msa1427530:intron 55.0%
!! GAACCCTGGTGCCATTCTCT+TGG + tig0026191:15638-15657 Msa1427530:intron 55.0%
CAGCCAAGAGAATGGCACCA+GGG - tig0026191:15644-15663 None:intergenic 55.0%
CTACCTGCCAGCCAAGAGAA+TGG - tig0026191:15652-15671 None:intergenic 55.0%
CGTTGCTAAGCCAAGTGCAC+AGG - tig0026191:15947-15966 None:intergenic 55.0%
GTTGCCACCATGACAGCTGT+CGG - tig0026191:15970-15989 None:intergenic 55.0%
ACAGCTGTCATGGTGGCAAC+AGG + tig0026191:15970-15989 Msa1427530:CDS 55.0%
CAGCTGTCATGGTGGCAACA+GGG + tig0026191:15971-15990 Msa1427530:CDS 55.0%
AGCTGTCATGGTGGCAACAG+GGG + tig0026191:15972-15991 Msa1427530:CDS 55.0%
TCATGGTGGCAACAGGGGTT+GGG + tig0026191:15977-15996 Msa1427530:CDS 55.0%
ACAGGGGTTGGGGCTAACAA+TGG + tig0026191:15988-16007 Msa1427530:CDS 55.0%
TGCCTTGGAAAGGGCTCAGA+TGG + tig0026191:16032-16051 Msa1427530:CDS 55.0%
CACCATCTGAGCCCTTTCCA+AGG - tig0026191:16037-16056 None:intergenic 55.0%
AGAGCTTAGGAGTTAGGCCG+TGG + tig0026191:16248-16267 Msa1427530:intron 55.0%
GAGCTTAGGAGTTAGGCCGT+GGG + tig0026191:16249-16268 Msa1427530:intron 55.0%
AGCTTAGGAGTTAGGCCGTG+GGG + tig0026191:16250-16269 Msa1427530:intron 55.0%
GCAGTCTGTGACAAGAGGAG+GGG - tig0026191:16334-16353 None:intergenic 55.0%
TCAGACTTCTCTGCTCTCCC+AGG + tig0026191:17033-17052 Msa1427530:CDS 55.0%
TTCTCTGCTCTCCCAGGAAG+AGG + tig0026191:17039-17058 Msa1427530:CDS 55.0%
AGAGGCAGCATGTCCTCAAC+AGG + tig0026191:17183-17202 Msa1427530:CDS 55.0%
GCAGCATGTCCTCAACAGGT+TGG + tig0026191:17187-17206 Msa1427530:CDS 55.0%
! GTCCTCAACAGGTTGGCAAC+AGG + tig0026191:17194-17213 Msa1427530:CDS 55.0%
AACAGCTCGCGCTGTTGCAA+AGG + tig0026191:17438-17457 Msa1427530:CDS 55.0%
AAGGGCAGAGGTTATGCCTG+CGG + tig0026191:17823-17842 Msa1427530:CDS 55.0%
AGCTGCTGCTGATGTTGGCA+TGG + tig0026191:17931-17950 Msa1427530:CDS 55.0%
GGCAGCTTGATACCCAGTGA+AGG - tig0026191:18142-18161 None:intergenic 55.0%
TGGGTATCAAGCTGCCACCA+TGG + tig0026191:18146-18165 Msa1427530:CDS 55.0%
GGGTATCAAGCTGCCACCAT+GGG + tig0026191:18147-18166 Msa1427530:CDS 55.0%
AAGCTGCCACCATGGGTTTC+TGG + tig0026191:18154-18173 Msa1427530:CDS 55.0%
CATGCACCAGAAACCCATGG+TGG - tig0026191:18163-18182 None:intergenic 55.0%
TTCAGTCCATGCACCCCCTA+GGG + tig0026191:18388-18407 Msa1427530:three_prime_UTR 55.0%
CTAACTACACCGATGGCCCC+CGG + tig0026191:11640-11659 Msa1427530:exon 60.0%
TTTCTCACACCGGGGGCCAT+CGG - tig0026191:11652-11671 None:intergenic 60.0%
TGTCGACGGCGGCAATCTTC+CGG - tig0026191:11702-11721 None:intergenic 60.0%
GTCATCGGAGTTGTCGACGG+CGG - tig0026191:11713-11732 None:intergenic 60.0%
GAACAAGGAGCGGGGAAGAG+GGG - tig0026191:12510-12529 None:intergenic 60.0%
CTGAACAAGGAGCGGGGAAG+AGG - tig0026191:12512-12531 None:intergenic 60.0%
CCAGCCAAGAGAATGGCACC+AGG - tig0026191:15645-15664 None:intergenic 60.0%
!! CCTGGTGCCATTCTCTTGGC+TGG + tig0026191:15642-15661 Msa1427530:intron 60.0%
! GTGCCATTCTCTTGGCTGGC+AGG + tig0026191:15646-15665 Msa1427530:intron 60.0%
AGCAACGCCGACAGCTGTCA+TGG + tig0026191:15960-15979 Msa1427530:CDS 60.0%
AACGCCGACAGCTGTCATGG+TGG + tig0026191:15963-15982 Msa1427530:CDS 60.0%
GTCATGGTGGCAACAGGGGT+TGG + tig0026191:15976-15995 Msa1427530:CDS 60.0%
CATGGTGGCAACAGGGGTTG+GGG + tig0026191:15978-15997 Msa1427530:CDS 60.0%
GTCTGTGACAAGAGGAGGGG+AGG - tig0026191:16331-16350 None:intergenic 60.0%
GGCTAGCAGTGAACACCCAC+TGG + tig0026191:16912-16931 Msa1427530:intron 60.0%
AGCTCGCGCTGTTGCAAAGG+AGG + tig0026191:17441-17460 Msa1427530:CDS 60.0%
AGGGCAGAGGTTATGCCTGC+GGG + tig0026191:17824-17843 Msa1427530:CDS 60.0%
GTTGGCATGGCAATTGGGGC+TGG + tig0026191:17944-17963 Msa1427530:CDS 60.0%
! CTAGGGGGTGCATGGACTGA+AGG - tig0026191:18389-18408 None:intergenic 60.0%
CTTCAGTCCATGCACCCCCT+AGG + tig0026191:18387-18406 Msa1427530:three_prime_UTR 60.0%
GCATGGTTTGAACCCGCGCC+AGG + tig0026191:12041-12060 Msa1427530:intron 65.0%
!! TCGGGGAGCGCCAGGAACAA+CGG - tig0026191:16530-16549 None:intergenic 65.0%
GACGGCGGCAATCTTCCGGC+CGG - tig0026191:11698-11717 None:intergenic 70.0%
AGGAGCGGGGAAGAGGGGAC+AGG - tig0026191:12505-12524 None:intergenic 70.0%
!! TAGGGAGTTCGGGGAGCGCC+AGG - tig0026191:16538-16557 None:intergenic 70.0%
! GGCACACCCTAGGGGGTGCA+TGG - tig0026191:18397-18416 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0026191 gene 11575 18678 11575 ID=Msa1427530;Name=Msa1427530
tig0026191 mRNA 11575 18678 11575 ID=Msa1427530-mRNA-1;Parent=Msa1427530;Name=Msa1427530-mRNA-1;_AED=0.07;_eAED=0.07;_QI=77|0.75|0.77|1|1|1|9|375|1016
tig0026191 exon 11575 11924 11575 ID=Msa1427530-mRNA-1:exon:5486;Parent=Msa1427530-mRNA-1
tig0026191 exon 13218 13832 13218 ID=Msa1427530-mRNA-1:exon:5487;Parent=Msa1427530-mRNA-1
tig0026191 exon 14154 14583 14154 ID=Msa1427530-mRNA-1:exon:5488;Parent=Msa1427530-mRNA-1
tig0026191 exon 14710 15068 14710 ID=Msa1427530-mRNA-1:exon:5489;Parent=Msa1427530-mRNA-1
tig0026191 exon 15668 15726 15668 ID=Msa1427530-mRNA-1:exon:5490;Parent=Msa1427530-mRNA-1
tig0026191 exon 15834 16176 15834 ID=Msa1427530-mRNA-1:exon:5491;Parent=Msa1427530-mRNA-1
tig0026191 exon 16913 17095 16913 ID=Msa1427530-mRNA-1:exon:5492;Parent=Msa1427530-mRNA-1
tig0026191 exon 17172 17462 17172 ID=Msa1427530-mRNA-1:exon:5493;Parent=Msa1427530-mRNA-1
tig0026191 exon 17806 18678 17806 ID=Msa1427530-mRNA-1:exon:5494;Parent=Msa1427530-mRNA-1
tig0026191 five_prime_UTR 11575 11651 11575 ID=Msa1427530-mRNA-1:five_prime_utr;Parent=Msa1427530-mRNA-1
tig0026191 CDS 11652 11924 11652 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 13218 13832 13218 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 14154 14583 14154 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 14710 15068 14710 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 15668 15726 15668 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 15834 16176 15834 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 16913 17095 16913 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 17172 17462 17172 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 CDS 17806 18303 17806 ID=Msa1427530-mRNA-1:cds;Parent=Msa1427530-mRNA-1
tig0026191 three_prime_UTR 18304 18678 18304 ID=Msa1427530-mRNA-1:three_prime_utr;Parent=Msa1427530-mRNA-1
Gene Sequence

>Msa1427530

ATGGCCCCCGGTGTGAGAAACTTACAGCTCACTAATTTACTCGCCGGCCGGAAGATTGCCGCCGTCGACAACTCCGATGACTTGGAAGACGTACGGCTCCTAGAATCCGACGATGAAACGAGAAGAATTCAGGTGAGGATCACCGGTATGACATGCACCGCTTGCTCTAATTCCATAGAATCAGCTCTTAAAGCCGTTGACGGTGTTCTCAGTGCTTCCGTTGCTTTGCTTCAGAACAGAGCTGACGTCGTTTTCAATTCTGCTCTTGTCAAGGATGAAGACATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGAAATATTACCTGAATCCAGTGGACCTGGAAAGGTTCCACATGAAACCCTGGTTGGACAGTTCACCATTGGAGGTATGACATGTGCAGCTTGTGTAAATTCTGTTGAAGGTATTTTGAGAAATCTTCCAGGGGTTAAAAGAGCTGTAGTAGCTTTGGCTACTTCGTTAGGCGAAGTCGAATATGATCCAAGTGTAATTAGTAAAGATGATATAGTCAATGCAATTGAAGATTCTGGCTTCGAAGCCTCGTTTGTACAGAGCAACGAGCAGGATAAAATTATTTTTGGAGTTGTTGGTGTGTATAGTTTAACAGACACACAGGTTTTAAAAGGCATGCTTAGTAACATGAAAGGAGTAAGGCAGTTTTGTTTTGACCAGTTATCGAGTGAATTAGATGTTCTGTTTGATCCTCAAGTTCTCAGTCCAAGGACCTTGGTTGATGAGATCCATGGGGAAAGCAATGGTAAGTTTGAGTTACATGTTAAAAGCCCTTATACAAGGATGGCTTCCAAAGATGTTGAAGAGACTTCAACTATATTTCGGCTCTTTATCTCCAGCCTGTGTCTTAGTGTTCCTCTCTTCTTCATGAAGGTAGTTTGTCCTCATATTCCGTTTATGTACTCCTTGTTACTTTGGCGATGCGGGCCTTTCCTCATGAGTGATTGGTTGAAATGGGCATTGGTGAGTGCAATCCAATTTGGAATTGGGAAACGCTTTTACATTGCAGCTGGAAGGGCTCTTAAGAATGGTTCAACAAACATGGATGTCCTGATTGCTGTGGGAACTACCGCCTCTTACGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCCCCAACTTACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGGAAGTATTTGGAAGTCCTTGCCAAGGGAAAGACATCTGATGCCATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTATTAATTATTAATGATAAAGATGGTAAATCTATTGAAGAAAGGGAAATTGATTCCTTGCTTATTCAACCTGGTGACACATTGAAAGTTCTTCCTGGTACGAAGATTCCTGCTGATGGTATTGTTACTTGGGGATCAAGTTATGTAAATGAGAGCATGGTAACCGGTGAATCTGTACCTGTTTTGAAGGAGGTGAATGCTTCTGTTATTGGGGGTACAATAAATTTGCATGGCGTCCTTCACATAAAAGCTACTAAAGTAGGATCTGATACAGTTCTGAGTCAGATAATAAGTATGGTTGAAACAGCACAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAAGTATTTGGGTCATAGTTGTTGACCTTCAAGTAGCAAGCATATTTGTTCCTACAGTTGTTTCTTTGGCATTGTTGACATTTTTGGGCTGGTATATAGCTGGTTCTAATGGAGCTTACCCAGAAGATTGGCTTCCAGAAAATGGAAATCACTTTGTCTTTGCCCTAATGTTCTCAATATCTGTAGTAGTAATTGCATGTCCCTGTGCACTTGGCTTAGCAACGCCGACAGCTGTCATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTATTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTATGTGATATTTGATAAGACAGGCACTCTAACTCAGGGAAAAGCCAGTGTTACTACTGCCAAAGTATTCACTGGAATGCAACGTGGGGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGCAAAAGCAGTATTAGCATATGCACGCCACTTTCATTTCTTTGAGGATTCTTCAGATGCTACACAGAATGATGCAAAGTCTGGATGGCTTTTTGATGTCTCAGACTTCTCTGCTCTCCCAGGAAGAGGTGTTCAATGTTCTATAGACGGGAGGCGTATTTTGAGTTTCTTATCAGAGGCAGCATGTCCTCAACAGGTTGGCAACAGGAAGTTGATGGTGGAAAATGGTATAAATATTTCAACAGAAGTGGAAAATTTTGTGGTTGAGCTGGAACAAAATGCGCAGACAGGGATACTAGTATCATATGATGATATATTAATTGGAGTTTTAGGGGTTGCAGACCCACTAAAGAGCGAAGCTTCTGTGGTTATAGAGGGCCTCCAGAAAATGGGTGTCATACCTGTTATGGTTACAGGAGATAATTGGCGAACAGCTCGCGCTGTTGCAAAGGAGGTTGGAATCCAAGATGTAAGGGCAGAGGTTATGCCTGCGGGAAAAGCTGAAATTGTTCGCTCATTCCAAAAGGACGGAAGCATAGTTGCAATGGTGGGCGATGGTATCAACGATTCTCCAGCATTAGCTGCTGCTGATGTTGGCATGGCAATTGGGGCTGGAACTGATGTTGCAATAGAAGCTGCTAACTTTGTGTTAATGAAAAATAACCTGGAAGATGTGATCACAGCCATTCATCTTTCCCGGAAGACGTTCTCTCGTATCAGATTGAATTACGTATTCGCAATGGGTTACAATGTTGTTGCTATACCAGTTGCAGCTGGGGTTTTATATCCTTCACTGGGTATCAAGCTGCCACCATGGGTTTCTGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCTTTGCTTCTTAAAAGATATAGAAGACCCAGACTAAGATATAGTAGACCCAGTGTTACCACAGGACTTGAAATAATTGTAGAATAA
Protein sequence

>Msa1427530

MAPGVRNLQLTNLLAGRKIAAVDNSDDLEDVRLLESDDETRRIQVRITGMTCTACSNSIESALKAVDGVLSASVALLQNRADVVFNSALVKDEDIKNAIEDAGFEAEILPESSGPGKVPHETLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSLGEVEYDPSVISKDDIVNAIEDSGFEASFVQSNEQDKIIFGVVGVYSLTDTQVLKGMLSNMKGVRQFCFDQLSSELDVLFDPQVLSPRTLVDEIHGESNGKFELHVKSPYTRMASKDVEETSTIFRLFISSLCLSVPLFFMKVVCPHIPFMYSLLLWRCGPFLMSDWLKWALVSAIQFGIGKRFYIAAGRALKNGSTNMDVLIAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLEVLAKGKTSDAIKKLVELAPATALLIINDKDGKSIEEREIDSLLIQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESVPVLKEVNASVIGGTINLHGVLHIKATKVGSDTVLSQIISMVETAQMSKAPIQKFADYVSIWVIVVDLQVASIFVPTVVSLALLTFLGWYIAGSNGAYPEDWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASVTTAKVFTGMQRGEFLTLVASAEASSEHPLAKAVLAYARHFHFFEDSSDATQNDAKSGWLFDVSDFSALPGRGVQCSIDGRRILSFLSEAACPQQVGNRKLMVENGINISTEVENFVVELEQNAQTGILVSYDDILIGVLGVADPLKSEASVVIEGLQKMGVIPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKAEIVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANFVLMKNNLEDVITAIHLSRKTFSRIRLNYVFAMGYNVVAIPVAAGVLYPSLGIKLPPWVSGACMALSSVSVVCSSLLLKRYRRPRLRYSRPSVTTGLEIIVE*