Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1427550 | XP_024633219.1 | 97.231 | 325 | 5 | 1 | 1 | 325 | 1 | 321 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1427550 | sp|Q8S2G4|GCD1_ORYSJ | 66.558 | 308 | 86 | 4 | 32 | 324 | 36 | 341 | 7.20e-142 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1427550 | A0A396J5Q1 | 97.231 | 325 | 5 | 1 | 1 | 325 | 1 | 321 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0243750 | Msa1427550 | 0.830696 | 2.538981e-55 | -8.615850e-47 |
| Msa0282290 | Msa1427550 | 0.830393 | 3.012557e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1427550 | MtrunA17_Chr2g0297071 | 97.231 | 325 | 5 | 1 | 1 | 325 | 1 | 321 | 0.0 | 652 |
| Msa1427550 | MtrunA17_Chr5g0416481 | 37.433 | 187 | 112 | 2 | 139 | 321 | 114 | 299 | 1.95e-36 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1427550 | AT5G62270.1 | 63.871 | 310 | 84 | 2 | 42 | 323 | 74 | 383 | 2.65e-128 | 372 |
| Msa1427550 | AT5G62270.2 | 63.666 | 311 | 85 | 2 | 42 | 324 | 74 | 384 | 4.94e-128 | 372 |
| Msa1427550 | AT2G02880.1 | 38.323 | 167 | 97 | 2 | 145 | 306 | 138 | 303 | 7.80e-32 | 121 |
Find 128 sgRNAs with CRISPR-Local
Find 448 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTTTCACTGTAGAGAAAA+TGG | 0.209976 | tig0026191:+37862 | Msa1427550:CDS |
| AGAAGCTTGCTAAGGATTAT+AGG | 0.276351 | tig0026191:+32734 | Msa1427550:CDS |
| ATGAACTTCATCCAAATCTT+TGG | 0.292613 | tig0026191:-33689 | None:intergenic |
| GATCCTACGACGACCCTAAC+TGG | 0.294183 | tig0026191:+32342 | Msa1427550:CDS |
| ACCTTGAAGTCAGGCTTATA+AGG | 0.313313 | tig0026191:-33640 | None:intergenic |
| GTGAAAGTCCATCCATCTTC+AGG | 0.314701 | tig0026191:-37848 | None:intergenic |
| AGAGAGTTCATGCTATTCTT+TGG | 0.330117 | tig0026191:+32767 | Msa1427550:CDS |
| CTTATGCAACCGATACATTT+CGG | 0.341757 | tig0026191:-32686 | None:intergenic |
| GGATGGCATTACCAAAGATT+TGG | 0.341994 | tig0026191:+33678 | Msa1427550:CDS |
| CACCATCTCCACGCTTCCCT+CGG | 0.344038 | tig0026191:-37889 | None:intergenic |
| TCCTCTTTGTTGTCAAGAAA+AGG | 0.354116 | tig0026191:+38213 | Msa1427550:three_prime_UTR |
| GTCGCCGTTGAAGTGGTCTT+TGG | 0.355754 | tig0026191:-32396 | None:intergenic |
| TCCTTATAAGCCTGACTTCA+AGG | 0.362850 | tig0026191:+33639 | Msa1427550:CDS |
| ATTGAGAATGTTCTGGAGAA+AGG | 0.368856 | tig0026191:-32302 | None:intergenic |
| GATGGTTTGCATTGCGGCGG+TGG | 0.369257 | tig0026191:-32219 | None:intergenic |
| GCAAAGTTTATGTTGATAGT+TGG | 0.369607 | tig0026191:+32575 | Msa1427550:CDS |
| TCATTATGAAATCTCCAAAA+AGG | 0.373269 | tig0026191:+33708 | Msa1427550:CDS |
| ACCATCTCCACGCTTCCCTC+GGG | 0.377406 | tig0026191:-37888 | None:intergenic |
| GTGGAAGGAGTTTCCCAGTT+AGG | 0.378137 | tig0026191:-32356 | None:intergenic |
| GACTGAGATTGAGAATGTTC+TGG | 0.385340 | tig0026191:-32309 | None:intergenic |
| CTCCATCTCATTCAGTGGTC+GGG | 0.389875 | tig0026191:-37948 | None:intergenic |
| TTGCATTGCGGCGGTGGGAA+TGG | 0.398804 | tig0026191:-32213 | None:intergenic |
| TCATGCTATTCTTTGGTTGA+AGG | 0.409173 | tig0026191:+32774 | Msa1427550:CDS |
| AAGGGAGAGGGTTGGAGTGG+CGG | 0.424577 | tig0026191:-32283 | None:intergenic |
| TTGAGAATGTTCTGGAGAAA+GGG | 0.428768 | tig0026191:-32301 | None:intergenic |
| TTGTAGTCTAATGCATCAAA+TGG | 0.429582 | tig0026191:+38068 | Msa1427550:three_prime_UTR |
| TGGAAGGAGTTTCCCAGTTA+GGG | 0.438650 | tig0026191:-32355 | None:intergenic |
| GGCGGTGGGAATGGTGTTGA+TGG | 0.443816 | tig0026191:-32204 | None:intergenic |
| TTCTTCCATTTGTTGGAGAT+CGG | 0.446702 | tig0026191:-32441 | None:intergenic |
| CCCCGAGGGAAGCGTGGAGA+TGG | 0.447371 | tig0026191:+37887 | Msa1427550:CDS |
| TCAGGCATCACCTTGAAGTC+AGG | 0.450284 | tig0026191:-33649 | None:intergenic |
| CTTTACTTCTAATTGTTCTA+CGG | 0.450405 | tig0026191:+32101 | None:intergenic |
| AGTCGACGACGCCCTGAAGA+TGG | 0.456550 | tig0026191:+37836 | Msa1427550:CDS |
| TTACGGCGAGTGAGGGAGAA+AGG | 0.457289 | tig0026191:-32179 | None:intergenic |
| CAAGTTCCACACGTTAAAAT+CGG | 0.458406 | tig0026191:-38246 | None:intergenic |
| CCTCTTTGTTGTCAAGAAAA+GGG | 0.458789 | tig0026191:+38214 | Msa1427550:three_prime_UTR |
| CAACATGGAATTCCCTATCA+TGG | 0.466626 | tig0026191:-33609 | None:intergenic |
| TGCACGAGGTTCGTATTTGA+AGG | 0.467693 | tig0026191:+32651 | Msa1427550:CDS |
| TCTCCATCTCATTCAGTGGT+CGG | 0.468003 | tig0026191:-37949 | None:intergenic |
| ATAATTTGAGCTAGATATTG+AGG | 0.469748 | tig0026191:-38166 | None:intergenic |
| GGAGAGGGTTGGAGTGGCGG+AGG | 0.474010 | tig0026191:-32280 | None:intergenic |
| TCTCTCCGATCTCCAACAAA+TGG | 0.474275 | tig0026191:+32436 | Msa1427550:CDS |
| GACGGAGATGAGACGGTTGA+TGG | 0.475629 | tig0026191:-32237 | None:intergenic |
| CGAGGGAAGCGTGGAGATGG+TGG | 0.477932 | tig0026191:+37890 | Msa1427550:CDS |
| AGGGAGAAAGGGAAAAGGAA+TGG | 0.479969 | tig0026191:-32167 | None:intergenic |
| GAGGGAAGCGTGGAGATGGT+GGG | 0.485604 | tig0026191:+37891 | Msa1427550:CDS |
| GACTTCAAGGTGATGCCTGA+GGG | 0.489995 | tig0026191:+33652 | Msa1427550:CDS |
| AAGGAAGGATCCTGCGTCGC+CGG | 0.490253 | tig0026191:-38000 | None:intergenic |
| CAAATACGAACCTCGTGCAC+CGG | 0.495955 | tig0026191:-32647 | None:intergenic |
| TTTGGTTAAGCCGGTGGACC+AGG | 0.497154 | tig0026191:-32378 | None:intergenic |
| GAGGAAGAAGAGAAGAAACT+TGG | 0.498712 | tig0026191:+32805 | Msa1427550:CDS |
| TCAATCTCAGTCTCCGGTGG+CGG | 0.501963 | tig0026191:+32320 | Msa1427550:CDS |
| GTTGGAGTGGCGGAGGTCGG+TGG | 0.502179 | tig0026191:-32273 | None:intergenic |
| AGACTCCACGCCGGCGACGC+AGG | 0.506375 | tig0026191:+37990 | Msa1427550:CDS |
| AATGTTCTGGAGAAAGGGAG+AGG | 0.507799 | tig0026191:-32296 | None:intergenic |
| AGGGTTGGAGTGGCGGAGGT+CGG | 0.508700 | tig0026191:-32276 | None:intergenic |
| AGGAACTCGAAGAAGAGAAT+CGG | 0.515350 | tig0026191:+32548 | Msa1427550:intron |
| ACTTTCACTGTAGAGAAAAT+GGG | 0.516405 | tig0026191:+37863 | Msa1427550:CDS |
| CAAGGTGATGCCTGAGGGGT+GGG | 0.516598 | tig0026191:+33657 | Msa1427550:CDS |
| AGTGGTCGGGTTGATCCATC+AGG | 0.517334 | tig0026191:-37935 | None:intergenic |
| GGTGGTGAGGTGGCGTGTGA+CGG | 0.517389 | tig0026191:-32255 | None:intergenic |
| AGGGAAGCGTGGAGATGGTG+GGG | 0.519409 | tig0026191:+37892 | Msa1427550:CDS |
| AATGTATCGGTTGCATAAGA+AGG | 0.519972 | tig0026191:+32690 | Msa1427550:CDS |
| TACAATTGAGAAGCTTGCTA+AGG | 0.523486 | tig0026191:+32726 | Msa1427550:CDS |
| GGGAAGCGTGGAGATGGTGG+GGG | 0.524254 | tig0026191:+37893 | Msa1427550:CDS |
| GGCGGAGGTCGGTGGTGAGG+TGG | 0.525856 | tig0026191:-32265 | None:intergenic |
| ACATTCTCAATCTCAGTCTC+CGG | 0.526723 | tig0026191:+32314 | Msa1427550:CDS |
| AAATACGAACCTCGTGCACC+GGG | 0.526841 | tig0026191:-32646 | None:intergenic |
| GCGAAAAGGCCGAAATGTAT+CGG | 0.527571 | tig0026191:+32677 | Msa1427550:CDS |
| TGAAAGTCCATCCATCTTCA+GGG | 0.528365 | tig0026191:-37847 | None:intergenic |
| GAATGGTGTTGATGGAGTTA+CGG | 0.528534 | tig0026191:-32196 | None:intergenic |
| AGGATCCTGCGTCGCCGGCG+TGG | 0.533729 | tig0026191:-37995 | None:intergenic |
| GTGATGCCTGAGGGGTGGGA+TGG | 0.534415 | tig0026191:+33661 | Msa1427550:CDS |
| GTTGCATAAGAAGGATCCTC+AGG | 0.536268 | tig0026191:+32699 | Msa1427550:CDS |
| GATTAATTAAAAGATACCCT+TGG | 0.540760 | tig0026191:-38144 | None:intergenic |
| GAAGTGGTCTTTGGTTAAGC+CGG | 0.542327 | tig0026191:-32387 | None:intergenic |
| TATAAGGAAGCGACGCAACA+TGG | 0.542911 | tig0026191:-33624 | None:intergenic |
| TTGGTTGGATGAGTTATCCA+AGG | 0.544247 | tig0026191:+38127 | Msa1427550:three_prime_UTR |
| GTAATGCCATCCCACCCCTC+AGG | 0.546397 | tig0026191:-33667 | None:intergenic |
| TGTGATTATGTACAGATGGC+TGG | 0.547197 | tig0026191:+37791 | Msa1427550:intron |
| ATGTTCTGGAGAAAGGGAGA+GGG | 0.547627 | tig0026191:-32295 | None:intergenic |
| ATGGTTTGCATTGCGGCGGT+GGG | 0.548027 | tig0026191:-32218 | None:intergenic |
| ATCCTACGACGACCCTAACT+GGG | 0.551295 | tig0026191:+32343 | Msa1427550:CDS |
| GATCGGAGTCGCCGTTGAAG+TGG | 0.551571 | tig0026191:-32403 | None:intergenic |
| TCTGGAGAAAGGGAGAGGGT+TGG | 0.554037 | tig0026191:-32291 | None:intergenic |
| TCAAGGTGATGCCTGAGGGG+TGG | 0.558636 | tig0026191:+33656 | Msa1427550:CDS |
| GTATTTGAAGGATAGCGAAA+AGG | 0.560510 | tig0026191:+32663 | Msa1427550:CDS |
| TACGGCGAGTGAGGGAGAAA+GGG | 0.562315 | tig0026191:-32178 | None:intergenic |
| ATGGGACCCCGAGGGAAGCG+TGG | 0.563468 | tig0026191:+37881 | Msa1427550:CDS |
| GAGTGAGGGAGAAAGGGAAA+AGG | 0.563680 | tig0026191:-32172 | None:intergenic |
| AGTGGCGGAGGTCGGTGGTG+AGG | 0.564697 | tig0026191:-32268 | None:intergenic |
| GTGGTCTTTGGTTAAGCCGG+TGG | 0.567830 | tig0026191:-32384 | None:intergenic |
| ACTCCTTCCACCTGGTCCAC+CGG | 0.570844 | tig0026191:+32368 | Msa1427550:CDS |
| AGATCGGAGAGAGTAGATTG+AGG | 0.571834 | tig0026191:-32425 | None:intergenic |
| GATGGAGTTACGGCGAGTGA+GGG | 0.574903 | tig0026191:-32186 | None:intergenic |
| AACATGGAATTCCCTATCAT+GGG | 0.578205 | tig0026191:-33608 | None:intergenic |
| AAGCCGGTGGACCAGGTGGA+AGG | 0.581082 | tig0026191:-32371 | None:intergenic |
| TGGTTGGATGAGTTATCCAA+GGG | 0.586000 | tig0026191:+38128 | Msa1427550:three_prime_UTR |
| TGATGGAGTTACGGCGAGTG+AGG | 0.586716 | tig0026191:-32187 | None:intergenic |
| GACGACGCCCTGAAGATGGA+TGG | 0.590877 | tig0026191:+37840 | Msa1427550:CDS |
| AACCCGACCACTGAATGAGA+TGG | 0.590970 | tig0026191:+37946 | Msa1427550:CDS |
| AAAGGGAAAAGGAATGGAGA+TGG | 0.591517 | tig0026191:-32161 | None:intergenic |
| TTCCCAGTTAGGGTCGTCGT+AGG | 0.596783 | tig0026191:-32345 | None:intergenic |
| GGAGAGAGTAGATTGAGGAT+CGG | 0.600016 | tig0026191:-32420 | None:intergenic |
| GTTCATGAACCCGGTGCACG+AGG | 0.608080 | tig0026191:+32637 | Msa1427550:CDS |
| TGACTTCAAGGTGATGCCTG+AGG | 0.609282 | tig0026191:+33651 | Msa1427550:CDS |
| AAATTTGCTAGCATGCCTGA+TGG | 0.611561 | tig0026191:+37920 | Msa1427550:CDS |
| TTGGTTGAAGGAGCTTGAAG+AGG | 0.615859 | tig0026191:+32786 | Msa1427550:CDS |
| TTAACCAAAGACCACTTCAA+CGG | 0.619033 | tig0026191:+32392 | Msa1427550:CDS |
| TTCTCAATTGTATAAACCTG+AGG | 0.619788 | tig0026191:-32715 | None:intergenic |
| TTCTCAATCTCAGTCTCCGG+TGG | 0.620253 | tig0026191:+32317 | Msa1427550:CDS |
| AGAAAGGGAGAGGGTTGGAG+TGG | 0.625032 | tig0026191:-32286 | None:intergenic |
| TTGAAGCAAGTTCATGAACC+CGG | 0.627599 | tig0026191:+32628 | Msa1427550:CDS |
| ACTTCAAGGTGATGCCTGAG+GGG | 0.631918 | tig0026191:+33653 | Msa1427550:CDS |
| ACTGGGAAACTCCTTCCACC+TGG | 0.633289 | tig0026191:+32360 | Msa1427550:CDS |
| CCATCTCCACGCTTCCCTCG+GGG | 0.634182 | tig0026191:-37887 | None:intergenic |
| GTCGTCGTAGGATCCGCCAC+CGG | 0.635561 | tig0026191:-32333 | None:intergenic |
| TGATAGTTGGAAGCAACGAA+TGG | 0.644704 | tig0026191:+32588 | Msa1427550:CDS |
| GGTTAAGCCGGTGGACCAGG+TGG | 0.662709 | tig0026191:-32375 | None:intergenic |
| TAGTTGGAAGCAACGAATGG+CGG | 0.665636 | tig0026191:+32591 | Msa1427550:CDS |
| GTTGATGGTTTGCATTGCGG+CGG | 0.666728 | tig0026191:-32222 | None:intergenic |
| TAGAGAAAATGGGACCCCGA+GGG | 0.676011 | tig0026191:+37873 | Msa1427550:CDS |
| GGCGTGTGACGGAGATGAGA+CGG | 0.678945 | tig0026191:-32244 | None:intergenic |
| GGCGTCGTCGACTATACTTG+TGG | 0.687966 | tig0026191:-37826 | None:intergenic |
| TTATGTACAGATGGCTGGAG+AGG | 0.689872 | tig0026191:+37796 | Msa1427550:intron |
| GTAGAGAAAATGGGACCCCG+AGG | 0.694523 | tig0026191:+37872 | Msa1427550:CDS |
| ACGGTTGATGGTTTGCATTG+CGG | 0.697264 | tig0026191:-32225 | None:intergenic |
| TGAGACGAGAGACTCCACGC+CGG | 0.769101 | tig0026191:+37981 | Msa1427550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | - | tig0026191:36146-36165 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | tig0026191:36147-36166 | None:intergenic | 0.0% |
| !! | TCATATATTTAGTTAAAATT+TGG | + | tig0026191:33105-33124 | Msa1427550:intron | 10.0% |
| !! | CATATATTTAGTTAAAATTT+GGG | + | tig0026191:33106-33125 | Msa1427550:intron | 10.0% |
| !! | ATATATTTAGTTAAAATTTG+GGG | + | tig0026191:33107-33126 | Msa1427550:intron | 10.0% |
| !!! | ATTCTATTATAATTTGTATT+TGG | - | tig0026191:34593-34612 | None:intergenic | 10.0% |
| !! | TATAAAACACTTAAAATTAA+AGG | - | tig0026191:36030-36049 | None:intergenic | 10.0% |
| !! | TATATATATATATATATAGG+GGG | - | tig0026191:36144-36163 | None:intergenic | 10.0% |
| !!! | TTTCCAATTTTATTTATTTT+TGG | + | tig0026191:36574-36593 | Msa1427550:intron | 10.0% |
| !!! | TTGTAACAAATATTTATTTT+TGG | + | tig0026191:37613-37632 | Msa1427550:intron | 10.0% |
| !! | ATAAATATTTGTAAGAATAA+AGG | - | tig0026191:37639-37658 | None:intergenic | 10.0% |
| !!! | TATTATTATTTATCCTTTTT+TGG | + | tig0026191:38108-38127 | Msa1427550:three_prime_UTR | 10.0% |
| !! | AATTGAATTGAATTGAATTT+AGG | + | tig0026191:32900-32919 | Msa1427550:intron | 15.0% |
| !! | ATTGAATTGAATTGAATTTA+GGG | + | tig0026191:32901-32920 | Msa1427550:intron | 15.0% |
| !!! | TGTTTAGTTTAGTTTAATTT+AGG | + | tig0026191:32964-32983 | Msa1427550:intron | 15.0% |
| !!! | GTTTAGTTTAGTTTAATTTA+GGG | + | tig0026191:32965-32984 | Msa1427550:intron | 15.0% |
| !!! | TGTTTAGTTTAGTTTAATTT+AGG | + | tig0026191:32964-32983 | Msa1427550:intron | 15.0% |
| !!! | GTTTAGTTTAGTTTAATTTA+GGG | + | tig0026191:32965-32984 | Msa1427550:intron | 15.0% |
| !!! | ATAAATTGAAGTCTAAATTT+TGG | + | tig0026191:33263-33282 | Msa1427550:intron | 15.0% |
| !!! | AAAATTGATTTTGAAATGTT+TGG | - | tig0026191:33374-33393 | None:intergenic | 15.0% |
| !!! | ATATCTATTTCTTTATAACA+AGG | - | tig0026191:33836-33855 | None:intergenic | 15.0% |
| !! | TTCATTGTAGAAATTAAATA+GGG | + | tig0026191:33896-33915 | Msa1427550:intron | 15.0% |
| !! | TATAACAAGTAGAAAAAAAT+AGG | - | tig0026191:34749-34768 | None:intergenic | 15.0% |
| !! | TTCGAACTTAATAATAAATT+GGG | - | tig0026191:35433-35452 | None:intergenic | 15.0% |
| !! | AGTAAGCATATATATATATA+TGG | + | tig0026191:35706-35725 | Msa1427550:intron | 15.0% |
| !! | GTAAGCATATATATATATAT+GGG | + | tig0026191:35707-35726 | Msa1427550:intron | 15.0% |
| !! | TAAGCATATATATATATATG+GGG | + | tig0026191:35708-35727 | Msa1427550:intron | 15.0% |
| !!! | TTTTAAGTGTTTTATAATAG+TGG | + | tig0026191:36034-36053 | Msa1427550:intron | 15.0% |
| !! | ATATATATATATATATAGGG+GGG | - | tig0026191:36143-36162 | None:intergenic | 15.0% |
| !!! | AAATAAAATGTTATTTTTGC+AGG | - | tig0026191:37335-37354 | None:intergenic | 15.0% |
| !! | TTCGGATAAAAAAAATTATT+TGG | + | tig0026191:37524-37543 | Msa1427550:intron | 15.0% |
| !! | TCGGATAAAAAAAATTATTT+GGG | + | tig0026191:37525-37544 | Msa1427550:intron | 15.0% |
| !! | TCATTACATCTAATAATAAC+AGG | + | tig0026191:32528-32547 | Msa1427550:intron | 20.0% |
| !!! | TTTAGTTTAATTTAGGGTTT+AGG | + | tig0026191:32971-32990 | Msa1427550:intron | 20.0% |
| !!! | TTAGTTTAATTTAGGGTTTA+GGG | + | tig0026191:32972-32991 | Msa1427550:intron | 20.0% |
| !!! | TTTAGTTTAATTTAGGGTTT+AGG | + | tig0026191:32971-32990 | Msa1427550:intron | 20.0% |
| !!! | TTAGTTTAATTTAGGGTTTA+GGG | + | tig0026191:32972-32991 | Msa1427550:intron | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | + | tig0026191:33212-33231 | Msa1427550:intron | 20.0% |
| !! | TCTTATGTTTAGTTGAATTT+AGG | + | tig0026191:33467-33486 | Msa1427550:intron | 20.0% |
| !!! | TTTAGTTGAATTTAGGTTTA+TGG | + | tig0026191:33474-33493 | Msa1427550:intron | 20.0% |
| !!! | TAAGTTGAATTTAGAGTTTA+TGG | + | tig0026191:33531-33550 | Msa1427550:intron | 20.0% |
| !!! | ATTTTTTATTTCCCATGATA+GGG | + | tig0026191:33597-33616 | Msa1427550:CDS | 20.0% |
| !! | CTTCATTGTAGAAATTAAAT+AGG | + | tig0026191:33895-33914 | Msa1427550:intron | 20.0% |
| !!! | ATAGTTTGACATGATATTTT+TGG | + | tig0026191:33929-33948 | Msa1427550:intron | 20.0% |
| !! | AGAAATAGAAGATTTAAAGA+CGG | + | tig0026191:34034-34053 | Msa1427550:intron | 20.0% |
| !!! | CTACTTGTTATATTTATGAT+CGG | + | tig0026191:34757-34776 | Msa1427550:intron | 20.0% |
| !!! | TACTTGTTATATTTATGATC+GGG | + | tig0026191:34758-34777 | Msa1427550:intron | 20.0% |
| !!! | CAATTTTTTCATAGATTTGA+GGG | - | tig0026191:34997-35016 | None:intergenic | 20.0% |
| !! | AAATCTATGAAAAAATTGCT+TGG | + | tig0026191:34999-35018 | Msa1427550:intron | 20.0% |
| !! | TTTAAATTTCATGTTTCAGA+AGG | + | tig0026191:35229-35248 | Msa1427550:intron | 20.0% |
| !! | CTTCGAACTTAATAATAAAT+TGG | - | tig0026191:35434-35453 | None:intergenic | 20.0% |
| !! | CAATTTATTATTAAGTTCGA+AGG | + | tig0026191:35432-35451 | Msa1427550:intron | 20.0% |
| !! | AAGCATATATATATATATGG+GGG | + | tig0026191:35709-35728 | Msa1427550:intron | 20.0% |
| !! | GTTTAAAAGTGAAACTAAAT+AGG | - | tig0026191:35819-35838 | None:intergenic | 20.0% |
| !!! | TTAGTTTCACTTTTAAACAA+AGG | + | tig0026191:35821-35840 | Msa1427550:intron | 20.0% |
| !!! | TAGTTTCACTTTTAAACAAA+GGG | + | tig0026191:35822-35841 | Msa1427550:intron | 20.0% |
| !!! | TGTTTTATAATAGTGGAATT+TGG | + | tig0026191:36041-36060 | Msa1427550:intron | 20.0% |
| !! | TATATATATATATATAGGGG+GGG | - | tig0026191:36142-36161 | None:intergenic | 20.0% |
| !! | GATATTAAGAGATATAGTTT+AGG | + | tig0026191:36343-36362 | Msa1427550:intron | 20.0% |
| !! | GAGTAAATTATATACTGAAA+GGG | + | tig0026191:36416-36435 | Msa1427550:intron | 20.0% |
| !! | GGACCAAAAATAAATAAAAT+TGG | - | tig0026191:36580-36599 | None:intergenic | 20.0% |
| !! | TACTATGCTTAAGAAAATAT+TGG | + | tig0026191:36665-36684 | Msa1427550:intron | 20.0% |
| !!! | TTAAGAAAATATTGGATTAG+TGG | + | tig0026191:36673-36692 | Msa1427550:intron | 20.0% |
| !! | TTACATAAAACCAAATATAC+GGG | - | tig0026191:36834-36853 | None:intergenic | 20.0% |
| !! | CTTACATAAAACCAAATATA+CGG | - | tig0026191:36835-36854 | None:intergenic | 20.0% |
| !!! | CATGTATTTTGAAATACAAA+GGG | + | tig0026191:36977-36996 | Msa1427550:intron | 20.0% |
| !! | GTTCTATATGAAGTTTAAAA+AGG | + | tig0026191:37122-37141 | Msa1427550:intron | 20.0% |
| !! | ATATCACAATAGAATATTGT+TGG | - | tig0026191:37366-37385 | None:intergenic | 20.0% |
| !! | ATCTAAGGAAAAAATATGTT+CGG | + | tig0026191:37506-37525 | Msa1427550:intron | 20.0% |
| !! | CGGATAAAAAAAATTATTTG+GGG | + | tig0026191:37526-37545 | Msa1427550:intron | 20.0% |
| !! | GGATAAAAAAAATTATTTGG+GGG | + | tig0026191:37527-37546 | Msa1427550:intron | 20.0% |
| !! | GATAAAAAAAATTATTTGGG+GGG | + | tig0026191:37528-37547 | Msa1427550:intron | 20.0% |
| !! | CAAAAACAAAAATGTAATCA+AGG | - | tig0026191:38022-38041 | None:intergenic | 20.0% |
| !!! | ATTATTTATCCTTTTTTGGT+TGG | + | tig0026191:38112-38131 | Msa1427550:three_prime_UTR | 20.0% |
| !!! | TTGAATTGAATTTAGGGTTT+TGG | + | tig0026191:32907-32926 | Msa1427550:intron | 25.0% |
| !! | TAGTTAAAATTTGGGGTTTA+TGG | + | tig0026191:33114-33133 | Msa1427550:intron | 25.0% |
| !! | TGATTTTGTGAAAGTGATTA+TGG | + | tig0026191:33175-33194 | Msa1427550:intron | 25.0% |
| !! | AATTGAAGTCTAAATTTTGG+AGG | + | tig0026191:33266-33285 | Msa1427550:intron | 25.0% |
| !!! | ACATCATTTTTCACTTAACA+AGG | - | tig0026191:33447-33466 | None:intergenic | 25.0% |
| !!! | GATTTTTTATTTCCCATGAT+AGG | + | tig0026191:33596-33615 | Msa1427550:intron | 25.0% |
| ! | TCATTATGAAATCTCCAAAA+AGG | + | tig0026191:33708-33727 | Msa1427550:CDS | 25.0% |
| !! | AGAAATTAAATAGGGTACTA+TGG | + | tig0026191:33904-33923 | Msa1427550:intron | 25.0% |
| !! | GAAATTAAATAGGGTACTAT+GGG | + | tig0026191:33905-33924 | Msa1427550:intron | 25.0% |
| !! | AAATTAAATAGGGTACTATG+GGG | + | tig0026191:33906-33925 | Msa1427550:intron | 25.0% |
| !!! | TTTGACATGATATTTTTGGT+GGG | + | tig0026191:33933-33952 | Msa1427550:intron | 25.0% |
| !! | CATATTTTCCTTAATAACTC+TGG | + | tig0026191:34089-34108 | Msa1427550:intron | 25.0% |
| !! | GCTAAACATAAGCATTTTTA+AGG | - | tig0026191:34153-34172 | None:intergenic | 25.0% |
| !!! | TGCTTATGTTTAGCTTTTAT+AGG | + | tig0026191:34159-34178 | Msa1427550:intron | 25.0% |
| ! | AGGTAGTATATGTTAATGTT+AGG | + | tig0026191:34261-34280 | Msa1427550:intron | 25.0% |
| ! | TGTTAGGATTACATAATAAG+AGG | + | tig0026191:34277-34296 | Msa1427550:intron | 25.0% |
| ! | GTTAGGATTACATAATAAGA+GGG | + | tig0026191:34278-34297 | Msa1427550:intron | 25.0% |
| ! | TGAAAATACAAGGTAATGTA+AGG | + | tig0026191:34546-34565 | Msa1427550:intron | 25.0% |
| ! | TTATTAGAAGCAAAGAAGTT+TGG | + | tig0026191:34615-34634 | Msa1427550:intron | 25.0% |
| ! | GTTTCAATGTAAAAGTTTCA+AGG | + | tig0026191:34644-34663 | Msa1427550:intron | 25.0% |
| ! | AAATAGAATGTTAATAGTGC+AGG | + | tig0026191:34712-34731 | Msa1427550:intron | 25.0% |
| ! | TCACACAATTATAGAAGATA+TGG | + | tig0026191:34867-34886 | Msa1427550:intron | 25.0% |
| !!! | GCAATTTTTTCATAGATTTG+AGG | - | tig0026191:34998-35017 | None:intergenic | 25.0% |
| ! | ATTCTTTAGTTAGTACATAC+TGG | + | tig0026191:35076-35095 | Msa1427550:intron | 25.0% |
| ! | TGAGCATCTAATATATGAAT+TGG | - | tig0026191:35258-35277 | None:intergenic | 25.0% |
| !! | TAGAACTATTTTGTGAGTAT+GGG | + | tig0026191:35350-35369 | Msa1427550:intron | 25.0% |
| !!! | TTTTTTGGTCAAATACTAGT+GGG | - | tig0026191:36064-36083 | None:intergenic | 25.0% |
| ! | TAAAAGTGAAACTAAATAGG+TGG | - | tig0026191:35816-35835 | None:intergenic | 25.0% |
| ! | TATAGCATGTTGGAAAAATA+GGG | - | tig0026191:35862-35881 | None:intergenic | 25.0% |
| ! | TTATAGCATGTTGGAAAAAT+AGG | - | tig0026191:35863-35882 | None:intergenic | 25.0% |
| !!! | ATATGTTTGTTATAGCATGT+TGG | - | tig0026191:35872-35891 | None:intergenic | 25.0% |
| !!! | AATAGTGGAATTTGGTTTTT+TGG | + | tig0026191:36049-36068 | Msa1427550:intron | 25.0% |
| !!! | TTTTTTGGTCAAATACTAGT+GGG | + | tig0026191:36064-36083 | Msa1427550:intron | 25.0% |
| ! | TATATATAGCCAATGCAATT+TGG | + | tig0026191:36222-36241 | Msa1427550:intron | 25.0% |
| ! | CGAGTAAATTATATACTGAA+AGG | + | tig0026191:36415-36434 | Msa1427550:intron | 25.0% |
| ! | TTATTGAACAATGACATTTC+TGG | + | tig0026191:36479-36498 | Msa1427550:intron | 25.0% |
| ! | GAAAAACAACTAAATGATGA+TGG | - | tig0026191:36601-36620 | None:intergenic | 25.0% |
| ! | TACAAAATTGTGCAAATTGT+AGG | + | tig0026191:36736-36755 | Msa1427550:intron | 25.0% |
| ! | ACAAAATTGTGCAAATTGTA+GGG | + | tig0026191:36737-36756 | Msa1427550:intron | 25.0% |
| !! | CTCAATATTCTCATTCTTTT+TGG | - | tig0026191:36803-36822 | None:intergenic | 25.0% |
| ! | ATGTTGAATGGTTTAATGAA+AGG | + | tig0026191:36878-36897 | Msa1427550:intron | 25.0% |
| !!! | GCATGTATTTTGAAATACAA+AGG | + | tig0026191:36976-36995 | Msa1427550:intron | 25.0% |
| !! | AATACAAAGGGTATATATGA+TGG | + | tig0026191:36989-37008 | Msa1427550:intron | 25.0% |
| ! | ATTCTATCCAGTTATCAAAT+GGG | - | tig0026191:37055-37074 | None:intergenic | 25.0% |
| ! | CTATATGAAGTTTAAAAAGG+AGG | + | tig0026191:37125-37144 | Msa1427550:intron | 25.0% |
| ! | TTAAGATCCATAACTGTAAT+CGG | + | tig0026191:37218-37237 | Msa1427550:intron | 25.0% |
| ! | TTCTATTGTGATATTAGTGT+TGG | + | tig0026191:37372-37391 | Msa1427550:intron | 25.0% |
| ! | AACAAAAATGTAATCAAGGA+AGG | - | tig0026191:38018-38037 | None:intergenic | 25.0% |
| ! | GATTAATTAAAAGATACCCT+TGG | - | tig0026191:38147-38166 | None:intergenic | 25.0% |
| ! | ATAATTTGAGCTAGATATTG+AGG | - | tig0026191:38169-38188 | None:intergenic | 25.0% |
| ! | GAAGTTTTTCTTCCATTTGT+TGG | - | tig0026191:32451-32470 | None:intergenic | 30.0% |
| ACAAATGGAAGAAAAACTTC+AGG | + | tig0026191:32451-32470 | Msa1427550:CDS | 30.0% | |
| !! | GCAAAGTTTATGTTGATAGT+TGG | + | tig0026191:32575-32594 | Msa1427550:CDS | 30.0% |
| TTCTCAATTGTATAAACCTG+AGG | - | tig0026191:32718-32737 | None:intergenic | 30.0% | |
| ! | AATTTAGGGTTTAGGGTTTA+TGG | + | tig0026191:32979-32998 | Msa1427550:intron | 30.0% |
| ! | AATTTAGGGTTTAGGGTTTA+TGG | + | tig0026191:32979-32998 | Msa1427550:intron | 30.0% |
| TTCAACTCACTTTAACATGA+AGG | - | tig0026191:33241-33260 | None:intergenic | 30.0% | |
| !! | CTTCAAGATAGAATCGATTT+TGG | + | tig0026191:33326-33345 | Msa1427550:intron | 30.0% |
| ATGAACTTCATCCAAATCTT+TGG | - | tig0026191:33692-33711 | None:intergenic | 30.0% | |
| TTATGAAATCTCCAAAAAGG+AGG | + | tig0026191:33711-33730 | Msa1427550:CDS | 30.0% | |
| !! | GATATCTTGCTATGTTTTTG+TGG | + | tig0026191:33851-33870 | Msa1427550:intron | 30.0% |
| !!! | GTTTGACATGATATTTTTGG+TGG | + | tig0026191:33932-33951 | Msa1427550:intron | 30.0% |
| !!! | TTGACATGATATTTTTGGTG+GGG | + | tig0026191:33934-33953 | Msa1427550:intron | 30.0% |
| TCTTTGTTCTGCAAAAACTT+TGG | - | tig0026191:33994-34013 | None:intergenic | 30.0% | |
| AGGAAAATATGTTTGTTTCC+TGG | - | tig0026191:34080-34099 | None:intergenic | 30.0% | |
| !! | TTCCTTAATAACTCTGGTTT+TGG | + | tig0026191:34095-34114 | Msa1427550:intron | 30.0% |
| !!! | TCCTTAATAACTCTGGTTTT+GGG | + | tig0026191:34096-34115 | Msa1427550:intron | 30.0% |
| !!! | CATAAGCATTTTTAAGGCTA+AGG | - | tig0026191:34147-34166 | None:intergenic | 30.0% |
| CTATTACCTTTCAGATTACT+TGG | + | tig0026191:34187-34206 | Msa1427550:intron | 30.0% | |
| TAAAGACCAAGTAATCTGAA+AGG | - | tig0026191:34196-34215 | None:intergenic | 30.0% | |
| CAGTTAGTAACAGAAATACA+AGG | + | tig0026191:34241-34260 | Msa1427550:intron | 30.0% | |
| GTATCTCTATTCTACATTTC+AGG | - | tig0026191:34380-34399 | None:intergenic | 30.0% | |
| ACATTTCCATTGTTACATTC+TGG | + | tig0026191:34398-34417 | Msa1427550:intron | 30.0% | |
| CATTTCCATTGTTACATTCT+GGG | + | tig0026191:34399-34418 | Msa1427550:intron | 30.0% | |
| ATTTCCATTGTTACATTCTG+GGG | + | tig0026191:34400-34419 | Msa1427550:intron | 30.0% | |
| !! | TTGTTGTTTATCCTGTATTC+TGG | + | tig0026191:34478-34497 | Msa1427550:intron | 30.0% |
| CGGAAGAAGAAAATATTGAA+TGG | + | tig0026191:34952-34971 | Msa1427550:intron | 30.0% | |
| CTATGAAAAAATTGCTTGGT+AGG | + | tig0026191:35003-35022 | Msa1427550:intron | 30.0% | |
| AGTCTTCAAGTGTTAATCAA+TGG | - | tig0026191:35050-35069 | None:intergenic | 30.0% | |
| !! | ACATACTGGTCTTTAATTTG+CGG | + | tig0026191:35090-35109 | Msa1427550:intron | 30.0% |
| ! | ACTTTCACTGATGATTTTAG+TGG | + | tig0026191:35150-35169 | Msa1427550:intron | 30.0% |
| ! | AAACATGAATTTTCGTAGAC+AGG | + | tig0026191:35175-35194 | Msa1427550:intron | 30.0% |
| ! | ATTTTCGTAGACAGGAAAAT+CGG | + | tig0026191:35183-35202 | Msa1427550:intron | 30.0% |
| TGTCACAAAAATTTGGTTAG+TGG | - | tig0026191:35306-35325 | None:intergenic | 30.0% | |
| ! | CTAGAACTATTTTGTGAGTA+TGG | + | tig0026191:35349-35368 | Msa1427550:intron | 30.0% |
| AAAAGAGTAGAACTATTGTG+TGG | + | tig0026191:35389-35408 | Msa1427550:intron | 30.0% | |
| !!! | GTATCTTTTTTAAAGTCCCA+AGG | - | tig0026191:35515-35534 | None:intergenic | 30.0% |
| TACTTCTGGGTAATATTTCA+GGG | - | tig0026191:35563-35582 | None:intergenic | 30.0% | |
| TACTAGTTACTACTACTTCT+GGG | - | tig0026191:35576-35595 | None:intergenic | 30.0% | |
| TTACTAGTTACTACTACTTC+TGG | - | tig0026191:35577-35596 | None:intergenic | 30.0% | |
| AATAGAAAGAATTTAGCAGC+AGG | - | tig0026191:35638-35657 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGGTCAAATACTAG+TGG | - | tig0026191:36063-36082 | None:intergenic | 30.0% |
| ATATTTCCTTAAAGATACCC+TGG | + | tig0026191:35888-35907 | Msa1427550:intron | 30.0% | |
| ! | TAGTTTGAAATTCAATGCCA+GGG | - | tig0026191:35908-35927 | None:intergenic | 30.0% |
| TAAAACATGGAAAACGGTTA+TGG | + | tig0026191:35961-35980 | Msa1427550:intron | 30.0% | |
| !!! | GTTTTTTGGTCAAATACTAG+TGG | + | tig0026191:36063-36082 | Msa1427550:intron | 30.0% |
| ATCTGGATGTCTAGATATTA+TGG | + | tig0026191:36284-36303 | Msa1427550:intron | 30.0% | |
| TCTGGATGTCTAGATATTAT+GGG | + | tig0026191:36285-36304 | Msa1427550:intron | 30.0% | |
| AGATATTATGGGACAAAACT+TGG | + | tig0026191:36296-36315 | Msa1427550:intron | 30.0% | |
| GATATTATGGGACAAAACTT+GGG | + | tig0026191:36297-36316 | Msa1427550:intron | 30.0% | |
| !! | AGTTTAGGTTGACAATTACT+TGG | + | tig0026191:36358-36377 | Msa1427550:intron | 30.0% |
| TATACTGAAAGGGAAAATTG+TGG | + | tig0026191:36426-36445 | Msa1427550:intron | 30.0% | |
| AACAATCTGGATGTTCTTAA+AGG | - | tig0026191:36522-36541 | None:intergenic | 30.0% | |
| AGAACATCCAGATTGTTAAA+TGG | + | tig0026191:36525-36544 | Msa1427550:intron | 30.0% | |
| TAATGGTCCATTTAACAATC+TGG | - | tig0026191:36535-36554 | None:intergenic | 30.0% | |
| AGATTGTTAAATGGACCATT+AGG | + | tig0026191:36534-36553 | Msa1427550:intron | 30.0% | |
| GATTGTTAAATGGACCATTA+GGG | + | tig0026191:36535-36554 | Msa1427550:intron | 30.0% | |
| ! | TGTTTTTCACAGTTTTTCTC+AGG | + | tig0026191:36613-36632 | Msa1427550:intron | 30.0% |
| ! | GTTTTTCACAGTTTTTCTCA+GGG | + | tig0026191:36614-36633 | Msa1427550:intron | 30.0% |
| ! | TTTTTCACAGTTTTTCTCAG+GGG | + | tig0026191:36615-36634 | Msa1427550:intron | 30.0% |
| !!! | ATACTTTTTTCCCTGTAGAT+AGG | - | tig0026191:36717-36736 | None:intergenic | 30.0% |
| CAAAATTGTGCAAATTGTAG+GGG | + | tig0026191:36738-36757 | Msa1427550:intron | 30.0% | |
| AAAATTGTGCAAATTGTAGG+GGG | + | tig0026191:36739-36758 | Msa1427550:intron | 30.0% | |
| TGAAACTTGTAGATGTAGAT+AGG | - | tig0026191:36775-36794 | None:intergenic | 30.0% | |
| AGAATGAGAATATTGAGACA+AGG | + | tig0026191:36806-36825 | Msa1427550:intron | 30.0% | |
| TTCAACATGTATATATCCCA+TGG | - | tig0026191:36866-36885 | None:intergenic | 30.0% | |
| TGGGATATATACATGTTGAA+TGG | + | tig0026191:36866-36885 | Msa1427550:intron | 30.0% | |
| ! | ATATAGTCCCATTTGATAAC+TGG | + | tig0026191:37045-37064 | Msa1427550:intron | 30.0% |
| CATTCTATCCAGTTATCAAA+TGG | - | tig0026191:37056-37075 | None:intergenic | 30.0% | |
| !!! | AATGCAAGTTGATGATGTTT+TGG | + | tig0026191:37161-37180 | Msa1427550:intron | 30.0% |
| TAAGATCCATAACTGTAATC+GGG | + | tig0026191:37219-37238 | Msa1427550:intron | 30.0% | |
| !! | ATTGAAGCTGGTTGATAAAA+TGG | + | tig0026191:37272-37291 | Msa1427550:intron | 30.0% |
| ACTTTCACTGTAGAGAAAAT+GGG | + | tig0026191:37863-37882 | Msa1427550:CDS | 30.0% | |
| TTGTAGTCTAATGCATCAAA+TGG | + | tig0026191:38068-38087 | Msa1427550:three_prime_UTR | 30.0% | |
| ATAACTCATCCAACCAAAAA+AGG | - | tig0026191:38124-38143 | None:intergenic | 30.0% | |
| !! | TTGAGAATGTTCTGGAGAAA+GGG | - | tig0026191:32304-32323 | None:intergenic | 35.0% |
| !! | ATTGAGAATGTTCTGGAGAA+AGG | - | tig0026191:32305-32324 | None:intergenic | 35.0% |
| TTAACCAAAGACCACTTCAA+CGG | + | tig0026191:32392-32411 | Msa1427550:CDS | 35.0% | |
| ! | TTCTTCCATTTGTTGGAGAT+CGG | - | tig0026191:32444-32463 | None:intergenic | 35.0% |
| GTATTTGAAGGATAGCGAAA+AGG | + | tig0026191:32663-32682 | Msa1427550:CDS | 35.0% | |
| CTTATGCAACCGATACATTT+CGG | - | tig0026191:32689-32708 | None:intergenic | 35.0% | |
| !! | AATGTATCGGTTGCATAAGA+AGG | + | tig0026191:32690-32709 | Msa1427550:CDS | 35.0% |
| !! | TACAATTGAGAAGCTTGCTA+AGG | + | tig0026191:32726-32745 | Msa1427550:CDS | 35.0% |
| !! | AGAAGCTTGCTAAGGATTAT+AGG | + | tig0026191:32734-32753 | Msa1427550:CDS | 35.0% |
| AGAGAGTTCATGCTATTCTT+TGG | + | tig0026191:32767-32786 | Msa1427550:CDS | 35.0% | |
| TCATGCTATTCTTTGGTTGA+AGG | + | tig0026191:32774-32793 | Msa1427550:CDS | 35.0% | |
| ! | TTGAAACAAAGCACTAACTC+TGG | - | tig0026191:32874-32893 | None:intergenic | 35.0% |
| TGGTTTATTTAGCGTGTGTT+TGG | + | tig0026191:33134-33153 | Msa1427550:intron | 35.0% | |
| TCTATCTTGAAGCTAGCATT+TGG | - | tig0026191:33318-33337 | None:intergenic | 35.0% | |
| ATGTTTGATTCCACTTCTGA+AGG | - | tig0026191:33419-33438 | None:intergenic | 35.0% | |
| ACAACAACAACAGCAAGAAA+AGG | - | tig0026191:33572-33591 | None:intergenic | 35.0% | |
| AACATGGAATTCCCTATCAT+GGG | - | tig0026191:33611-33630 | None:intergenic | 35.0% | |
| ! | AAGCATATCATCCTCCTTTT+TGG | - | tig0026191:33725-33744 | None:intergenic | 35.0% |
| AGAAGAAAGTGAGTTCTCTT+TGG | + | tig0026191:33779-33798 | Msa1427550:intron | 35.0% | |
| !!! | TGATATTTTTGGTGGGGTTT+TGG | + | tig0026191:33940-33959 | Msa1427550:intron | 35.0% |
| ACCCAAAACCAGAGTTATTA+AGG | - | tig0026191:34100-34119 | None:intergenic | 35.0% | |
| !!! | AATAACTCTGGTTTTGGGTT+TGG | + | tig0026191:34101-34120 | Msa1427550:intron | 35.0% |
| GGATTACATAATAAGAGGGA+AGG | + | tig0026191:34282-34301 | Msa1427550:intron | 35.0% | |
| ATAAGAGGGAAGGAATAGTA+TGG | + | tig0026191:34292-34311 | Msa1427550:intron | 35.0% | |
| GAGTCTTTAACTATTGAGAG+TGG | + | tig0026191:34321-34340 | Msa1427550:intron | 35.0% | |
| TATTGAGAGTGGAATCTGAA+AGG | + | tig0026191:34332-34351 | Msa1427550:intron | 35.0% | |
| ATTGAGAGTGGAATCTGAAA+GGG | + | tig0026191:34333-34352 | Msa1427550:intron | 35.0% | |
| ! | ATCAAACTGATTCTGATCAG+AGG | + | tig0026191:34436-34455 | Msa1427550:intron | 35.0% |
| ! | TCAAACTGATTCTGATCAGA+GGG | + | tig0026191:34437-34456 | Msa1427550:intron | 35.0% |
| TTCATAGCCTGACTAATCAA+CGG | - | tig0026191:34530-34549 | None:intergenic | 35.0% | |
| AGTCAGGCTATGAAAATACA+AGG | + | tig0026191:34536-34555 | Msa1427550:intron | 35.0% | |
| ! | AAAGTCTTATCCTACTAGGT+GGG | - | tig0026191:34816-34835 | None:intergenic | 35.0% |
| ! | CAACAAAGTCTTATCCTACT+AGG | - | tig0026191:34820-34839 | None:intergenic | 35.0% |
| CCATGCATGTCACAAAAATT+TGG | - | tig0026191:35313-35332 | None:intergenic | 35.0% | |
| ! | CCAAATTTTTGTGACATGCA+TGG | + | tig0026191:35310-35329 | Msa1427550:intron | 35.0% |
| ! | TTTTGTGAGTATGGGTAAGT+TGG | + | tig0026191:35358-35377 | Msa1427550:intron | 35.0% |
| TGTGGTTATGCTATCAGAAA+AGG | + | tig0026191:35407-35426 | Msa1427550:intron | 35.0% | |
| CTTAGTAGCAAGTGCATATT+GGG | - | tig0026191:35466-35485 | None:intergenic | 35.0% | |
| ACTTAGTAGCAAGTGCATAT+TGG | - | tig0026191:35467-35486 | None:intergenic | 35.0% | |
| GCTACTAAGTACTAATCCAA+AGG | + | tig0026191:35477-35496 | Msa1427550:intron | 35.0% | |
| AAGGATACTTAAACAGCCTT+TGG | - | tig0026191:35496-35515 | None:intergenic | 35.0% | |
| AAAGGCTGTTTAAGTATCCT+TGG | + | tig0026191:35495-35514 | Msa1427550:intron | 35.0% | |
| AAGGCTGTTTAAGTATCCTT+GGG | + | tig0026191:35496-35515 | Msa1427550:intron | 35.0% | |
| CTACTTCTGGGTAATATTTC+AGG | - | tig0026191:35564-35583 | None:intergenic | 35.0% | |
| CGAATAACATCATTCTATGC+AGG | - | tig0026191:35664-35683 | None:intergenic | 35.0% | |
| ! | ACTTGCACCTTAATGGTTTT+AGG | - | tig0026191:35752-35771 | None:intergenic | 35.0% |
| !!! | AATAGGTGGAGTTGGTTTTT+TGG | - | tig0026191:35802-35821 | None:intergenic | 35.0% |
| TGAAACTAAATAGGTGGAGT+TGG | - | tig0026191:35810-35829 | None:intergenic | 35.0% | |
| ! | GTAGTTTGAAATTCAATGCC+AGG | - | tig0026191:35909-35928 | None:intergenic | 35.0% |
| ! | GTTTTCCATGTTTTACGCTT+CGG | - | tig0026191:35956-35975 | None:intergenic | 35.0% |
| GAAGCGTAAAACATGGAAAA+CGG | + | tig0026191:35955-35974 | Msa1427550:intron | 35.0% | |
| !!! | TTTTTAGGTGGGTGTAAGTT+AGG | + | tig0026191:36114-36133 | Msa1427550:intron | 35.0% |
| ! | ATCGGATCAAACTGTCTTTT+GGG | + | tig0026191:36260-36279 | Msa1427550:intron | 35.0% |
| GGAGTAGAAGAGTGAATTTA+TGG | + | tig0026191:36447-36466 | Msa1427550:intron | 35.0% | |
| ! | TTTTCACAGTTTTTCTCAGG+GGG | + | tig0026191:36616-36635 | Msa1427550:intron | 35.0% |
| ACATTTAGATGCCTATCTAC+AGG | + | tig0026191:36703-36722 | Msa1427550:intron | 35.0% | |
| CATTTAGATGCCTATCTACA+GGG | + | tig0026191:36704-36723 | Msa1427550:intron | 35.0% | |
| AAATTGTGCAAATTGTAGGG+GGG | + | tig0026191:36740-36759 | Msa1427550:intron | 35.0% | |
| TTATGTAAGTTGCTCAACCA+TGG | + | tig0026191:36846-36865 | Msa1427550:intron | 35.0% | |
| TATGTAAGTTGCTCAACCAT+GGG | + | tig0026191:36847-36866 | Msa1427550:intron | 35.0% | |
| AGTTCATCACACACTACTAA+CGG | - | tig0026191:37015-37034 | None:intergenic | 35.0% | |
| ACCAATATCACATCATACCA+TGG | + | tig0026191:37194-37213 | Msa1427550:intron | 35.0% | |
| ACCATGGTATGATGTGATAT+TGG | - | tig0026191:37198-37217 | None:intergenic | 35.0% | |
| CAGTTATGGATCTTAAACCA+TGG | - | tig0026191:37214-37233 | None:intergenic | 35.0% | |
| CATATCACCATTTGCTTGTT+TGG | - | tig0026191:37408-37427 | None:intergenic | 35.0% | |
| AAAAATTATTTGGGGGGAAC+TGG | + | tig0026191:37534-37553 | Msa1427550:intron | 35.0% | |
| ACAAAGAAAAGACAGAGCAT+GGG | - | tig0026191:37718-37737 | None:intergenic | 35.0% | |
| AACAAAGAAAAGACAGAGCA+TGG | - | tig0026191:37719-37738 | None:intergenic | 35.0% | |
| TGGTTGTGATTATGTACAGA+TGG | + | tig0026191:37787-37806 | Msa1427550:intron | 35.0% | |
| GACTTTCACTGTAGAGAAAA+TGG | + | tig0026191:37862-37881 | Msa1427550:CDS | 35.0% | |
| ! | ATTTTCTCCATCTCATTCAG+TGG | - | tig0026191:37956-37975 | None:intergenic | 35.0% |
| ! | TCCTCTTTGTTGTCAAGAAA+AGG | + | tig0026191:38213-38232 | Msa1427550:three_prime_UTR | 35.0% |
| ! | CCTCTTTGTTGTCAAGAAAA+GGG | + | tig0026191:38214-38233 | Msa1427550:three_prime_UTR | 35.0% |
| CAAGTTCCACACGTTAAAAT+CGG | - | tig0026191:38249-38268 | None:intergenic | 35.0% | |
| AAAGGGAAAAGGAATGGAGA+TGG | - | tig0026191:32164-32183 | None:intergenic | 40.0% | |
| !! | GAATGGTGTTGATGGAGTTA+CGG | - | tig0026191:32199-32218 | None:intergenic | 40.0% |
| GACTGAGATTGAGAATGTTC+TGG | - | tig0026191:32312-32331 | None:intergenic | 40.0% | |
| ACATTCTCAATCTCAGTCTC+CGG | + | tig0026191:32314-32333 | Msa1427550:CDS | 40.0% | |
| AGGAACTCGAAGAAGAGAAT+CGG | + | tig0026191:32548-32567 | Msa1427550:intron | 40.0% | |
| TGATAGTTGGAAGCAACGAA+TGG | + | tig0026191:32588-32607 | Msa1427550:CDS | 40.0% | |
| TTGAAGCAAGTTCATGAACC+CGG | + | tig0026191:32628-32647 | Msa1427550:CDS | 40.0% | |
| GAGGAAGAAGAGAAGAAACT+TGG | + | tig0026191:32805-32824 | Msa1427550:CDS | 40.0% | |
| ! | AATTTTCCCTCCTTCAGAAG+TGG | + | tig0026191:33406-33425 | Msa1427550:intron | 40.0% |
| ! | TTGATTCCACTTCTGAAGGA+GGG | - | tig0026191:33415-33434 | None:intergenic | 40.0% |
| ! | TTTGATTCCACTTCTGAAGG+AGG | - | tig0026191:33416-33435 | None:intergenic | 40.0% |
| CAACATGGAATTCCCTATCA+TGG | - | tig0026191:33612-33631 | None:intergenic | 40.0% | |
| TCCTTATAAGCCTGACTTCA+AGG | + | tig0026191:33639-33658 | Msa1427550:CDS | 40.0% | |
| ACCTTGAAGTCAGGCTTATA+AGG | - | tig0026191:33643-33662 | None:intergenic | 40.0% | |
| GGATGGCATTACCAAAGATT+TGG | + | tig0026191:33678-33697 | Msa1427550:CDS | 40.0% | |
| !!! | ATTTTTGGTGGGGTTTTGGT+TGG | + | tig0026191:33944-33963 | Msa1427550:intron | 40.0% |
| AATGAGCTGGTTAACAAACC+AGG | + | tig0026191:34059-34078 | Msa1427550:intron | 40.0% | |
| TCTTTATTAGATGCTGCAGC+AGG | + | tig0026191:34210-34229 | Msa1427550:intron | 40.0% | |
| CTTTATTAGATGCTGCAGCA+GGG | + | tig0026191:34211-34230 | Msa1427550:intron | 40.0% | |
| TCATGAGTTCACCAGAATAC+AGG | - | tig0026191:34492-34511 | None:intergenic | 40.0% | |
| !! | TTCTGCGAGAAGTTTTGTCA+TGG | + | tig0026191:34673-34692 | Msa1427550:intron | 40.0% |
| ! | AAGTCTTATCCTACTAGGTG+GGG | - | tig0026191:34815-34834 | None:intergenic | 40.0% |
| ! | CAAAGTCTTATCCTACTAGG+TGG | - | tig0026191:34817-34836 | None:intergenic | 40.0% |
| AGTGACAGCTGATATGACTA+TGG | + | tig0026191:34911-34930 | Msa1427550:intron | 40.0% | |
| ACTATGGCTTGAAGACTCTT+CGG | + | tig0026191:34927-34946 | Msa1427550:intron | 40.0% | |
| TTTGAGGGATACTAGAACTG+TGG | - | tig0026191:34982-35001 | None:intergenic | 40.0% | |
| CTTCTGCTGACAGGTTTAAA+AGG | - | tig0026191:35117-35136 | None:intergenic | 40.0% | |
| TAATGCTTACTTCTGCTGAC+AGG | - | tig0026191:35126-35145 | None:intergenic | 40.0% | |
| ACACCCACCTAAAACCATTA+AGG | + | tig0026191:35742-35761 | Msa1427550:intron | 40.0% | |
| !!! | GCACCTTAATGGTTTTAGGT+GGG | - | tig0026191:35748-35767 | None:intergenic | 40.0% |
| !!! | TGCACCTTAATGGTTTTAGG+TGG | - | tig0026191:35749-35768 | None:intergenic | 40.0% |
| ! | CTTGCTAACTTGCACCTTAA+TGG | - | tig0026191:35759-35778 | None:intergenic | 40.0% |
| ! | TCAATGCCAGGGTATCTTTA+AGG | - | tig0026191:35897-35916 | None:intergenic | 40.0% |
| AATGTCCGAAGCGTAAAACA+TGG | + | tig0026191:35948-35967 | Msa1427550:intron | 40.0% | |
| CACAAAGCTCCAAATTGCAT+TGG | - | tig0026191:36234-36253 | None:intergenic | 40.0% | |
| ! | CATCGGATCAAACTGTCTTT+TGG | + | tig0026191:36259-36278 | Msa1427550:intron | 40.0% |
| ! | TCGGATCAAACTGTCTTTTG+GGG | + | tig0026191:36261-36280 | Msa1427550:intron | 40.0% |
| TAAATGGACCATTAGGGCAT+TGG | + | tig0026191:36541-36560 | Msa1427550:intron | 40.0% | |
| ! | AGACAAGGTACCCGTATATT+TGG | + | tig0026191:36821-36840 | Msa1427550:intron | 40.0% |
| AACAGCAGAAATCCTGTTGA+AGG | + | tig0026191:36932-36951 | Msa1427550:intron | 40.0% | |
| AGTAGTGTGTGATGAACTCA+TGG | + | tig0026191:37017-37036 | Msa1427550:intron | 40.0% | |
| ! | TTGAGTTGTAACCGAAGCTT+TGG | + | tig0026191:37090-37109 | Msa1427550:intron | 40.0% |
| !! | TAACCGAAGCTTTGGAATTC+TGG | + | tig0026191:37098-37117 | Msa1427550:intron | 40.0% |
| ACTCCAGAATTCCAAAGCTT+CGG | - | tig0026191:37104-37123 | None:intergenic | 40.0% | |
| CAATCTCCCGATTACAGTTA+TGG | - | tig0026191:37228-37247 | None:intergenic | 40.0% | |
| ATCGGGAGATTGATCATCAA+TGG | + | tig0026191:37236-37255 | Msa1427550:intron | 40.0% | |
| TCGGGAGATTGATCATCAAT+GGG | + | tig0026191:37237-37256 | Msa1427550:intron | 40.0% | |
| TATCAACCAGCTTCAATCCA+GGG | - | tig0026191:37269-37288 | None:intergenic | 40.0% | |
| TTATCAACCAGCTTCAATCC+AGG | - | tig0026191:37270-37289 | None:intergenic | 40.0% | |
| GAGAAGTCCAAACAAGCAAA+TGG | + | tig0026191:37398-37417 | Msa1427550:intron | 40.0% | |
| GCAAATGGTGATATGAGTGT+TGG | + | tig0026191:37413-37432 | Msa1427550:intron | 40.0% | |
| GTTGCATGAGTGCATATCTA+AGG | + | tig0026191:37491-37510 | Msa1427550:intron | 40.0% | |
| AACTGGAGTAGCAACTATTG+AGG | + | tig0026191:37551-37570 | Msa1427550:intron | 40.0% | |
| ACTGGAGTAGCAACTATTGA+GGG | + | tig0026191:37552-37571 | Msa1427550:intron | 40.0% | |
| GTAGAACTCGCTGAATAACT+TGG | + | tig0026191:37767-37786 | Msa1427550:intron | 40.0% | |
| TGTGATTATGTACAGATGGC+TGG | + | tig0026191:37791-37810 | Msa1427550:intron | 40.0% | |
| TGAAAGTCCATCCATCTTCA+GGG | - | tig0026191:37850-37869 | None:intergenic | 40.0% | |
| !! | AAATTTGCTAGCATGCCTGA+TGG | + | tig0026191:37920-37939 | Msa1427550:CDS | 40.0% |
| TTGGTTGGATGAGTTATCCA+AGG | + | tig0026191:38127-38146 | Msa1427550:three_prime_UTR | 40.0% | |
| TGGTTGGATGAGTTATCCAA+GGG | + | tig0026191:38128-38147 | Msa1427550:three_prime_UTR | 40.0% | |
| ! | CCCTTTTCTTGACAACAAAG+AGG | - | tig0026191:38217-38236 | None:intergenic | 40.0% |
| !!! | CTAACACCGATTTTAACGTG+TGG | + | tig0026191:38240-38259 | Msa1427550:three_prime_UTR | 40.0% |
| AGGGAGAAAGGGAAAAGGAA+TGG | - | tig0026191:32170-32189 | None:intergenic | 45.0% | |
| !! | ACGGTTGATGGTTTGCATTG+CGG | - | tig0026191:32228-32247 | None:intergenic | 45.0% |
| !! | ATGTTCTGGAGAAAGGGAGA+GGG | - | tig0026191:32298-32317 | None:intergenic | 45.0% |
| !! | AATGTTCTGGAGAAAGGGAG+AGG | - | tig0026191:32299-32318 | None:intergenic | 45.0% |
| TGGAAGGAGTTTCCCAGTTA+GGG | - | tig0026191:32358-32377 | None:intergenic | 45.0% | |
| GAAGTGGTCTTTGGTTAAGC+CGG | - | tig0026191:32390-32409 | None:intergenic | 45.0% | |
| GGAGAGAGTAGATTGAGGAT+CGG | - | tig0026191:32423-32442 | None:intergenic | 45.0% | |
| AGATCGGAGAGAGTAGATTG+AGG | - | tig0026191:32428-32447 | None:intergenic | 45.0% | |
| TCTCTCCGATCTCCAACAAA+TGG | + | tig0026191:32436-32455 | Msa1427550:CDS | 45.0% | |
| TAGTTGGAAGCAACGAATGG+CGG | + | tig0026191:32591-32610 | Msa1427550:CDS | 45.0% | |
| TGCACGAGGTTCGTATTTGA+AGG | + | tig0026191:32651-32670 | Msa1427550:CDS | 45.0% | |
| GCGAAAAGGCCGAAATGTAT+CGG | + | tig0026191:32677-32696 | Msa1427550:CDS | 45.0% | |
| GTTGCATAAGAAGGATCCTC+AGG | + | tig0026191:32699-32718 | Msa1427550:CDS | 45.0% | |
| TTGGTTGAAGGAGCTTGAAG+AGG | + | tig0026191:32786-32805 | Msa1427550:CDS | 45.0% | |
| !! | TTAGCGTGTGTTTGGTTCTG+CGG | + | tig0026191:33142-33161 | Msa1427550:intron | 45.0% |
| TATAAGGAAGCGACGCAACA+TGG | - | tig0026191:33627-33646 | None:intergenic | 45.0% | |
| !!! | GGGTTTTGGTTGGTAAACTG+TGG | + | tig0026191:33954-33973 | Msa1427550:intron | 45.0% |
| TGGTAAACTGTGGAGTGTAG+AGG | + | tig0026191:33964-33983 | Msa1427550:intron | 45.0% | |
| TTTAAAGACGGCGAATGAGC+TGG | + | tig0026191:34046-34065 | Msa1427550:intron | 45.0% | |
| GGAAGGAATAGTATGGACTC+TGG | + | tig0026191:34299-34318 | Msa1427550:intron | 45.0% | |
| GAATCTGAAAGGGACAGTCT+AGG | + | tig0026191:34343-34362 | Msa1427550:intron | 45.0% | |
| GAGACCCCAGAATGTAACAA+TGG | - | tig0026191:34407-34426 | None:intergenic | 45.0% | |
| AATCAACGGTTGTTGGACAC+TGG | - | tig0026191:34516-34535 | None:intergenic | 45.0% | |
| CCTGACTAATCAACGGTTGT+TGG | - | tig0026191:34523-34542 | None:intergenic | 45.0% | |
| ! | CCAACAACCGTTGATTAGTC+AGG | + | tig0026191:34520-34539 | Msa1427550:intron | 45.0% |
| ATATCAGCTGTCACTGTCAG+CGG | - | tig0026191:34906-34925 | None:intergenic | 45.0% | |
| ! | TGGAGCTTTGTGTTGCTCAT+CGG | + | tig0026191:36242-36261 | Msa1427550:intron | 45.0% |
| !! | CAAACTGTCTTTTGGGGATC+TGG | + | tig0026191:36267-36286 | Msa1427550:intron | 45.0% |
| TAGCTACACCAATGCCCTAA+TGG | - | tig0026191:36552-36571 | None:intergenic | 45.0% | |
| !! | GTATCTCTAGAGCCTTCAAC+AGG | - | tig0026191:36947-36966 | None:intergenic | 45.0% |
| AGTGTGTGATGAACTCATGG+AGG | + | tig0026191:37020-37039 | Msa1427550:intron | 45.0% | |
| TCATCAATGGGTATGTTCCC+TGG | + | tig0026191:37249-37268 | Msa1427550:intron | 45.0% | |
| TATGTTCCCTGGATTGAAGC+TGG | + | tig0026191:37260-37279 | Msa1427550:intron | 45.0% | |
| AAGACAGAGCATGGGTGTTT+GGG | - | tig0026191:37710-37729 | None:intergenic | 45.0% | |
| AAAGACAGAGCATGGGTGTT+TGG | - | tig0026191:37711-37730 | None:intergenic | 45.0% | |
| TTATGTACAGATGGCTGGAG+AGG | + | tig0026191:37796-37815 | Msa1427550:intron | 45.0% | |
| GTGAAAGTCCATCCATCTTC+AGG | - | tig0026191:37851-37870 | None:intergenic | 45.0% | |
| TCTCCATCTCATTCAGTGGT+CGG | - | tig0026191:37952-37971 | None:intergenic | 45.0% | |
| !! | ATATATATATATATATATAG+GGG | - | tig0026191:36211-36230 | None:intergenic | 5.0% |
| GAGTGAGGGAGAAAGGGAAA+AGG | - | tig0026191:32175-32194 | None:intergenic | 50.0% | |
| !! | GTTGATGGTTTGCATTGCGG+CGG | - | tig0026191:32225-32244 | None:intergenic | 50.0% |
| TTCTCAATCTCAGTCTCCGG+TGG | + | tig0026191:32317-32336 | Msa1427550:CDS | 50.0% | |
| ATCCTACGACGACCCTAACT+GGG | + | tig0026191:32343-32362 | Msa1427550:CDS | 50.0% | |
| GTGGAAGGAGTTTCCCAGTT+AGG | - | tig0026191:32359-32378 | None:intergenic | 50.0% | |
| AAATACGAACCTCGTGCACC+GGG | - | tig0026191:32649-32668 | None:intergenic | 50.0% | |
| CAAATACGAACCTCGTGCAC+CGG | - | tig0026191:32650-32669 | None:intergenic | 50.0% | |
| TCAGGCATCACCTTGAAGTC+AGG | - | tig0026191:33652-33671 | None:intergenic | 50.0% | |
| TGACTTCAAGGTGATGCCTG+AGG | + | tig0026191:33651-33670 | Msa1427550:CDS | 50.0% | |
| GACTTCAAGGTGATGCCTGA+GGG | + | tig0026191:33652-33671 | Msa1427550:CDS | 50.0% | |
| ACTTCAAGGTGATGCCTGAG+GGG | + | tig0026191:33653-33672 | Msa1427550:CDS | 50.0% | |
| CTTATCCTACTAGGTGGGGT+TGG | - | tig0026191:34811-34830 | None:intergenic | 50.0% | |
| GGCTTGAAGACTCTTCGGAA+CGG | + | tig0026191:34932-34951 | Msa1427550:intron | 50.0% | |
| AGACAGAGCATGGGTGTTTG+GGG | - | tig0026191:37709-37728 | None:intergenic | 50.0% | |
| TAGAGAAAATGGGACCCCGA+GGG | + | tig0026191:37873-37892 | Msa1427550:CDS | 50.0% | |
| AACCCGACCACTGAATGAGA+TGG | + | tig0026191:37946-37965 | Msa1427550:CDS | 50.0% | |
| CTCCATCTCATTCAGTGGTC+GGG | - | tig0026191:37951-37970 | None:intergenic | 50.0% | |
| TACGGCGAGTGAGGGAGAAA+GGG | - | tig0026191:32181-32200 | None:intergenic | 55.0% | |
| TTACGGCGAGTGAGGGAGAA+AGG | - | tig0026191:32182-32201 | None:intergenic | 55.0% | |
| GATGGAGTTACGGCGAGTGA+GGG | - | tig0026191:32189-32208 | None:intergenic | 55.0% | |
| TGATGGAGTTACGGCGAGTG+AGG | - | tig0026191:32190-32209 | None:intergenic | 55.0% | |
| ! | ATGGTTTGCATTGCGGCGGT+GGG | - | tig0026191:32221-32240 | None:intergenic | 55.0% |
| GACGGAGATGAGACGGTTGA+TGG | - | tig0026191:32240-32259 | None:intergenic | 55.0% | |
| AGAAAGGGAGAGGGTTGGAG+TGG | - | tig0026191:32289-32308 | None:intergenic | 55.0% | |
| TCTGGAGAAAGGGAGAGGGT+TGG | - | tig0026191:32294-32313 | None:intergenic | 55.0% | |
| TCAATCTCAGTCTCCGGTGG+CGG | + | tig0026191:32320-32339 | Msa1427550:CDS | 55.0% | |
| GATCCTACGACGACCCTAAC+TGG | + | tig0026191:32342-32361 | Msa1427550:CDS | 55.0% | |
| TTCCCAGTTAGGGTCGTCGT+AGG | - | tig0026191:32348-32367 | None:intergenic | 55.0% | |
| ACTGGGAAACTCCTTCCACC+TGG | + | tig0026191:32360-32379 | Msa1427550:CDS | 55.0% | |
| TTTGGTTAAGCCGGTGGACC+AGG | - | tig0026191:32381-32400 | None:intergenic | 55.0% | |
| GTGGTCTTTGGTTAAGCCGG+TGG | - | tig0026191:32387-32406 | None:intergenic | 55.0% | |
| GTCGCCGTTGAAGTGGTCTT+TGG | - | tig0026191:32399-32418 | None:intergenic | 55.0% | |
| !! | ACTAGGTGGGGTTGGCTACA+TGG | - | tig0026191:34803-34822 | None:intergenic | 55.0% |
| TGTAGCCAACCCCACCTAGT+AGG | + | tig0026191:34803-34822 | Msa1427550:intron | 55.0% | |
| ! | GGCGTCGTCGACTATACTTG+TGG | - | tig0026191:37829-37848 | None:intergenic | 55.0% |
| GTAGAGAAAATGGGACCCCG+AGG | + | tig0026191:37872-37891 | Msa1427550:CDS | 55.0% | |
| !! | AGTGGTCGGGTTGATCCATC+AGG | - | tig0026191:37938-37957 | None:intergenic | 55.0% |
| ! | GGCGGTGGGAATGGTGTTGA+TGG | - | tig0026191:32207-32226 | None:intergenic | 60.0% |
| TTGCATTGCGGCGGTGGGAA+TGG | - | tig0026191:32216-32235 | None:intergenic | 60.0% | |
| ! | GATGGTTTGCATTGCGGCGG+TGG | - | tig0026191:32222-32241 | None:intergenic | 60.0% |
| ! | GGCGTGTGACGGAGATGAGA+CGG | - | tig0026191:32247-32266 | None:intergenic | 60.0% |
| AAGGGAGAGGGTTGGAGTGG+CGG | - | tig0026191:32286-32305 | None:intergenic | 60.0% | |
| ACTCCTTCCACCTGGTCCAC+CGG | + | tig0026191:32368-32387 | Msa1427550:CDS | 60.0% | |
| GATCGGAGTCGCCGTTGAAG+TGG | - | tig0026191:32406-32425 | None:intergenic | 60.0% | |
| GTTCATGAACCCGGTGCACG+AGG | + | tig0026191:32637-32656 | Msa1427550:CDS | 60.0% | |
| TCAAGGTGATGCCTGAGGGG+TGG | + | tig0026191:33656-33675 | Msa1427550:CDS | 60.0% | |
| CAAGGTGATGCCTGAGGGGT+GGG | + | tig0026191:33657-33676 | Msa1427550:CDS | 60.0% | |
| GTAATGCCATCCCACCCCTC+AGG | - | tig0026191:33670-33689 | None:intergenic | 60.0% | |
| AGTCGACGACGCCCTGAAGA+TGG | + | tig0026191:37836-37855 | Msa1427550:CDS | 60.0% | |
| GACGACGCCCTGAAGATGGA+TGG | + | tig0026191:37840-37859 | Msa1427550:CDS | 60.0% | |
| ACCATCTCCACGCTTCCCTC+GGG | - | tig0026191:37891-37910 | None:intergenic | 60.0% | |
| CACCATCTCCACGCTTCCCT+CGG | - | tig0026191:37892-37911 | None:intergenic | 60.0% | |
| ! | GAGGGAAGCGTGGAGATGGT+GGG | + | tig0026191:37891-37910 | Msa1427550:CDS | 60.0% |
| ! | AGGGAAGCGTGGAGATGGTG+GGG | + | tig0026191:37892-37911 | Msa1427550:CDS | 60.0% |
| TGAGACGAGAGACTCCACGC+CGG | + | tig0026191:37981-38000 | Msa1427550:CDS | 60.0% | |
| AAGGAAGGATCCTGCGTCGC+CGG | - | tig0026191:38003-38022 | None:intergenic | 60.0% | |
| GGTGGTGAGGTGGCGTGTGA+CGG | - | tig0026191:32258-32277 | None:intergenic | 65.0% | |
| ! | AGGGTTGGAGTGGCGGAGGT+CGG | - | tig0026191:32279-32298 | None:intergenic | 65.0% |
| GTCGTCGTAGGATCCGCCAC+CGG | - | tig0026191:32336-32355 | None:intergenic | 65.0% | |
| AAGCCGGTGGACCAGGTGGA+AGG | - | tig0026191:32374-32393 | None:intergenic | 65.0% | |
| GGTTAAGCCGGTGGACCAGG+TGG | - | tig0026191:32378-32397 | None:intergenic | 65.0% | |
| GTGATGCCTGAGGGGTGGGA+TGG | + | tig0026191:33661-33680 | Msa1427550:CDS | 65.0% | |
| CCATCTCCACGCTTCCCTCG+GGG | - | tig0026191:37890-37909 | None:intergenic | 65.0% | |
| ! | CGAGGGAAGCGTGGAGATGG+TGG | + | tig0026191:37890-37909 | Msa1427550:CDS | 65.0% |
| ! | GGGAAGCGTGGAGATGGTGG+GGG | + | tig0026191:37893-37912 | Msa1427550:CDS | 65.0% |
| ! | AGTGGCGGAGGTCGGTGGTG+AGG | - | tig0026191:32271-32290 | None:intergenic | 70.0% |
| ! | GTTGGAGTGGCGGAGGTCGG+TGG | - | tig0026191:32276-32295 | None:intergenic | 70.0% |
| GGAGAGGGTTGGAGTGGCGG+AGG | - | tig0026191:32283-32302 | None:intergenic | 70.0% | |
| ATGGGACCCCGAGGGAAGCG+TGG | + | tig0026191:37881-37900 | Msa1427550:CDS | 70.0% | |
| ! | CCCCGAGGGAAGCGTGGAGA+TGG | + | tig0026191:37887-37906 | Msa1427550:CDS | 70.0% |
| !! | AGCGTGGAGATGGTGGGGGC+TGG | + | tig0026191:37897-37916 | Msa1427550:CDS | 70.0% |
| GGCGGAGGTCGGTGGTGAGG+TGG | - | tig0026191:32268-32287 | None:intergenic | 75.0% | |
| AGACTCCACGCCGGCGACGC+AGG | + | tig0026191:37990-38009 | Msa1427550:CDS | 75.0% | |
| AGGATCCTGCGTCGCCGGCG+TGG | - | tig0026191:37998-38017 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026191 | gene | 32112 | 38276 | 32112 | ID=Msa1427550;Name=Msa1427550 |
| tig0026191 | mRNA | 32112 | 38276 | 32112 | ID=Msa1427550-mRNA-1;Parent=Msa1427550;Name=Msa1427550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=118|1|1|1|1|1|4|252|325 |
| tig0026191 | exon | 32112 | 32472 | 32112 | ID=Msa1427550-mRNA-1:exon:5480;Parent=Msa1427550-mRNA-1 |
| tig0026191 | exon | 32550 | 32875 | 32550 | ID=Msa1427550-mRNA-1:exon:5481;Parent=Msa1427550-mRNA-1 |
| tig0026191 | exon | 33597 | 33786 | 33597 | ID=Msa1427550-mRNA-1:exon:5482;Parent=Msa1427550-mRNA-1 |
| tig0026191 | exon | 37806 | 38276 | 37806 | ID=Msa1427550-mRNA-1:exon:5483;Parent=Msa1427550-mRNA-1 |
| tig0026191 | five_prime_UTR | 32112 | 32229 | 32112 | ID=Msa1427550-mRNA-1:five_prime_utr;Parent=Msa1427550-mRNA-1 |
| tig0026191 | CDS | 32230 | 32472 | 32230 | ID=Msa1427550-mRNA-1:cds;Parent=Msa1427550-mRNA-1 |
| tig0026191 | CDS | 32550 | 32875 | 32550 | ID=Msa1427550-mRNA-1:cds;Parent=Msa1427550-mRNA-1 |
| tig0026191 | CDS | 33597 | 33786 | 33597 | ID=Msa1427550-mRNA-1:cds;Parent=Msa1427550-mRNA-1 |
| tig0026191 | CDS | 37806 | 38024 | 37806 | ID=Msa1427550-mRNA-1:cds;Parent=Msa1427550-mRNA-1 |
| tig0026191 | three_prime_UTR | 38025 | 38276 | 38025 | ID=Msa1427550-mRNA-1:three_prime_utr;Parent=Msa1427550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
