AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1435570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435570 MtrunA17_Chr4g0037141 71.765 170 42 1 1 170 1 164 1.43e-87 258
Msa1435570 MtrunA17_Chr3g0131121 74.834 151 29 1 1 142 1 151 3.32e-82 244
Msa1435570 MtrunA17_Chr8g0385321 82.171 129 23 0 1 129 1 129 2.08e-78 236
Msa1435570 MtrunA17_Chr5g0435101 63.816 152 54 1 3 154 2 152 1.99e-69 209
Msa1435570 MtrunA17_Chr6g0453471 62.162 148 56 0 1 148 1 148 1.59e-65 204
Msa1435570 MtrunA17_Chr7g0217741 63.448 145 50 1 1 142 1 145 3.23e-65 202
Msa1435570 MtrunA17_Chr2g0281071 68.992 129 39 1 1 128 1 129 7.38e-65 202
Msa1435570 MtrunA17_Chr4g0042671 66.667 141 46 1 1 141 1 140 4.27e-64 202
Msa1435570 MtrunA17_Chr4g0048511 68.217 129 40 1 1 128 1 129 6.83e-64 200
Msa1435570 MtrunA17_Chr3g0115821 65.625 128 44 0 1 128 1 128 7.61e-64 199
Msa1435570 MtrunA17_Chr2g0323411 68.750 128 40 0 1 128 1 128 8.31e-64 199
Msa1435570 MtrunA17_Chr4g0044421 62.069 145 48 2 3 140 2 146 1.93e-63 193
Msa1435570 MtrunA17_Chr4g0039971 66.406 128 43 0 1 128 2 129 7.58e-63 197
Msa1435570 MtrunA17_Chr1g0193371 67.176 131 43 0 1 131 1 131 1.73e-62 196
Msa1435570 MtrunA17_Chr4g0057031 65.649 131 45 0 1 131 1 131 3.57e-62 193
Msa1435570 MtrunA17_Chr4g0058631 67.176 131 43 0 1 131 1 131 3.82e-62 196
Msa1435570 MtrunA17_Chr5g0410961 67.969 128 41 0 1 128 1 128 4.20e-62 195
Msa1435570 MtrunA17_Chr7g0270891 56.604 159 60 1 1 150 1 159 1.02e-61 194
Msa1435570 MtrunA17_Chr8g0346561 73.276 116 31 0 1 116 1 116 1.28e-61 192
Msa1435570 MtrunA17_Chr7g0275911 72.414 116 32 0 1 116 1 116 2.57e-61 190
Msa1435570 MtrunA17_Chr1g0193801 58.667 150 60 1 1 148 1 150 5.70e-61 193
Msa1435570 MtrunA17_Chr3g0121241 67.200 125 41 0 5 129 35 159 3.19e-60 189
Msa1435570 MtrunA17_Chr3g0117091 65.116 129 45 0 1 129 1 129 1.26e-59 189
Msa1435570 MtrunA17_Chr8g0349261 64.122 131 45 2 1 129 1 131 3.32e-59 186
Msa1435570 MtrunA17_Chr4g0068061 71.552 116 33 0 1 116 1 116 4.30e-59 187
Msa1435570 MtrunA17_Chr5g0434571 58.865 141 58 0 1 141 37 177 4.55e-59 187
Msa1435570 MtrunA17_Chr1g0187761 70.690 116 34 0 1 116 1 116 9.48e-59 184
Msa1435570 MtrunA17_Chr1g0211161 64.567 127 45 0 3 129 4 130 1.60e-58 182
Msa1435570 MtrunA17_Chr3g0103281 58.273 139 58 0 1 139 1 139 1.96e-58 185
Msa1435570 MtrunA17_Chr7g0271241 61.538 143 55 0 1 143 1 143 2.12e-58 186
Msa1435570 MtrunA17_Chr4g0070611 70.690 116 34 0 1 116 1 116 2.92e-58 184
Msa1435570 MtrunA17_Chr4g0070641 70.690 116 34 0 1 116 1 116 4.64e-58 179
Msa1435570 MtrunA17_Chr3g0110351 63.492 126 46 0 1 126 1 126 4.82e-58 183
Msa1435570 MtrunA17_Chr1g0203411 56.250 160 61 3 1 151 1 160 5.15e-58 183
Msa1435570 MtrunA17_Chr1g0167661 67.797 118 38 0 1 118 1 118 1.38e-57 181
Msa1435570 MtrunA17_Chr6g0452271 60.305 131 52 0 1 131 1 131 1.57e-57 183
Msa1435570 MtrunA17_Chr5g0395281 61.719 128 49 0 1 128 1 128 5.41e-57 181
Msa1435570 MtrunA17_Chr7g0228891 61.069 131 51 0 1 131 1 131 6.31e-57 179
Msa1435570 MtrunA17_Chr1g0167691 67.521 117 38 0 1 117 1 117 9.41e-57 178
Msa1435570 MtrunA17_Chr2g0330041 64.000 125 45 0 1 125 1 125 1.53e-56 182
Msa1435570 MtrunA17_Chr7g0274581 65.517 116 40 0 1 116 1 116 1.73e-56 176
Msa1435570 MtrunA17_Chr8g0342521 62.903 124 46 0 1 124 1 124 4.12e-56 179
Msa1435570 MtrunA17_Chr1g0194951 65.625 128 44 0 1 128 1 128 9.48e-56 179
Msa1435570 MtrunA17_Chr2g0309911 62.810 121 45 0 6 126 5 125 1.28e-55 177
Msa1435570 MtrunA17_Chr8g0342541 61.290 124 48 0 1 124 1 124 4.55e-55 177
Msa1435570 MtrunA17_Chr7g0261281 66.379 116 39 0 1 116 1 116 1.79e-54 173
Msa1435570 MtrunA17_Chr8g0342481 56.643 143 55 2 1 136 1 143 1.42e-53 174
Msa1435570 MtrunA17_Chr4g0022881 57.143 140 58 1 1 140 1 138 3.18e-53 169
Msa1435570 MtrunA17_Chr7g0269831 58.503 147 60 1 1 146 1 147 3.65e-53 172
Msa1435570 MtrunA17_Chr7g0217221 62.931 116 43 0 1 116 1 116 6.59e-52 166
Msa1435570 MtrunA17_Chr8g0387421 61.207 116 45 0 1 116 1 116 6.95e-52 168
Msa1435570 MtrunA17_Chr2g0311221 67.273 110 36 0 2 111 4 113 9.12e-52 168
Msa1435570 MtrunA17_Chr4g0060721 62.069 116 44 0 1 116 2 117 2.53e-51 167
Msa1435570 MtrunA17_Chr4g0022931 49.686 159 68 3 1 157 1 149 5.42e-51 164
Msa1435570 MtrunA17_Chr3g0092401 62.931 116 43 0 1 116 2 117 6.11e-51 165
Msa1435570 MtrunA17_Chr7g0254411 61.111 126 47 1 1 124 1 126 6.89e-51 166
Msa1435570 MtrunA17_Chr4g0022891 62.832 113 42 0 1 113 1 113 8.23e-51 163
Msa1435570 MtrunA17_Chr3g0135311 59.167 120 48 1 1 119 1 120 8.50e-51 166
Msa1435570 MtrunA17_Chr1g0151941 47.305 167 82 3 1 161 1 167 1.14e-50 163
Msa1435570 MtrunA17_Chr7g0264641 51.007 149 70 2 1 148 1 147 2.05e-50 163
Msa1435570 MtrunA17_Chr4g0022911 50.314 159 70 4 1 157 1 152 2.32e-50 163
Msa1435570 MtrunA17_Chr2g0323351 60.684 117 46 0 1 117 1 117 2.41e-50 162
Msa1435570 MtrunA17_Chr5g0417821 58.140 129 54 0 12 140 7 135 4.64e-50 162
Msa1435570 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 8.12e-50 163
Msa1435570 MtrunA17_Chr1g0152011 59.167 120 48 1 1 119 1 120 1.00e-49 163
Msa1435570 MtrunA17_Chr4g0022901 60.169 118 46 1 1 117 1 118 2.37e-49 160
Msa1435570 MtrunA17_Chr4g0028311 57.480 127 52 2 1 126 1 126 4.93e-49 160
Msa1435570 MtrunA17_Chr5g0400821 57.500 120 50 1 1 119 1 120 1.14e-48 159
Msa1435570 MtrunA17_Chr2g0328771 66.019 103 35 0 14 116 22 124 4.50e-48 158
Msa1435570 MtrunA17_Chr3g0088461 63.889 108 39 0 9 116 19 126 1.48e-47 157
Msa1435570 MtrunA17_Chr6g0453211 60.360 111 44 0 1 111 1 111 1.86e-47 156
Msa1435570 MtrunA17_Chr4g0032401 57.480 127 46 1 14 140 19 137 2.64e-47 156
Msa1435570 MtrunA17_Chr4g0055981 62.617 107 40 0 9 115 52 158 6.28e-47 152
Msa1435570 MtrunA17_Chr1g0203441 53.741 147 63 3 14 160 15 156 1.81e-46 152
Msa1435570 MtrunA17_Chr8g0343831 61.207 116 41 1 1 116 1 112 2.05e-46 152
Msa1435570 MtrunA17_Chr2g0327351 60.360 111 43 1 1 110 1 111 2.24e-46 154
Msa1435570 MtrunA17_Chr4g0054391 60.000 110 43 1 1 109 1 110 5.07e-46 152
Msa1435570 MtrunA17_Chr6g0470971 47.273 165 83 2 7 171 9 169 8.63e-46 151
Msa1435570 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 3.29e-44 149
Msa1435570 MtrunA17_Chr1g0186061 60.000 110 44 0 6 115 14 123 6.35e-44 145
Msa1435570 MtrunA17_Chr6g0487491 52.756 127 51 2 1 118 1 127 1.02e-43 145
Msa1435570 MtrunA17_Chr7g0240821 53.543 127 51 1 16 142 5 123 2.74e-43 143
Msa1435570 MtrunA17_Chr6g0450101 57.627 118 48 1 1 116 1 118 2.91e-43 142
Msa1435570 MtrunA17_Chr1g0180391 44.910 167 78 2 10 163 17 182 4.61e-43 143
Msa1435570 MtrunA17_Chr7g0247131 62.500 112 32 2 44 145 10 121 5.55e-43 144
Msa1435570 MtrunA17_Chr7g0228231 62.857 105 39 0 12 116 14 118 8.64e-43 141
Msa1435570 MtrunA17_Chr1g0168661 63.725 102 37 0 14 115 23 124 1.66e-42 142
Msa1435570 MtrunA17_Chr5g0434931 57.273 110 47 0 12 121 35 144 1.71e-42 143
Msa1435570 MtrunA17_Chr7g0220341 59.091 110 43 1 12 119 25 134 3.02e-42 142
Msa1435570 MtrunA17_Chr5g0434911 55.752 113 50 0 7 119 16 128 3.56e-42 142
Msa1435570 MtrunA17_Chr1g0209661 60.185 108 43 0 8 115 23 130 6.77e-42 142
Msa1435570 MtrunA17_Chr7g0228991 58.333 108 45 0 12 119 29 136 7.54e-41 138
Msa1435570 MtrunA17_Chr8g0354661 57.692 104 44 0 12 115 37 140 1.15e-40 143
Msa1435570 MtrunA17_Chr4g0042611 67.045 88 29 0 1 88 1 88 2.96e-40 131
Msa1435570 MtrunA17_Chr1g0194291 61.538 104 40 0 12 115 21 124 4.00e-40 136
Msa1435570 MtrunA17_Chr3g0145551 83.529 85 10 2 91 171 1 85 6.94e-40 130
Msa1435570 MtrunA17_Chr5g0434831 56.481 108 47 0 12 119 7 114 1.60e-39 132
Msa1435570 MtrunA17_Chr8g0360111 58.252 103 43 0 10 112 23 125 1.64e-39 134
Msa1435570 MtrunA17_Chr8g0342531 52.586 116 50 1 1 111 1 116 1.65e-39 132
Msa1435570 MtrunA17_Chr8g0342511 65.517 87 30 0 1 87 1 87 2.84e-39 129
Msa1435570 MtrunA17_Chr1g0194301 57.692 104 44 0 12 115 33 136 2.88e-39 134
Msa1435570 MtrunA17_Chr2g0294811 61.957 92 35 0 1 92 1 92 3.02e-39 129
Msa1435570 MtrunA17_Chr5g0434841 57.407 108 46 0 12 119 20 127 3.34e-39 135
Msa1435570 MtrunA17_Chr3g0080861 55.769 104 46 0 12 115 37 140 3.61e-39 139
Msa1435570 MtrunA17_Chr3g0099131 54.717 106 48 0 10 115 39 144 4.00e-39 139
Msa1435570 MtrunA17_Chr2g0327821 47.287 129 65 1 12 137 6 134 1.65e-38 131
Msa1435570 MtrunA17_Chr1g0154031 55.769 104 46 0 12 115 76 179 5.62e-38 134
Msa1435570 MtrunA17_Chr8g0342461 61.111 90 34 1 1 89 1 90 2.97e-37 125
Msa1435570 MtrunA17_Chr1g0192411 47.727 132 63 1 1 126 1 132 4.53e-37 132
Msa1435570 MtrunA17_Chr2g0323321 59.794 97 38 1 1 97 1 96 6.70e-37 123
Msa1435570 MtrunA17_Chr8g0342471 61.111 90 34 1 1 89 1 90 9.51e-37 124
Msa1435570 MtrunA17_Chr5g0440781 47.015 134 65 4 14 145 14 143 2.11e-36 124
Msa1435570 MtrunA17_Chr4g0030881 53.211 109 44 1 14 115 9 117 5.21e-36 125
Msa1435570 MtrunA17_Chr5g0440761 47.015 134 65 4 14 145 14 143 1.07e-35 125
Msa1435570 MtrunA17_Chr5g0441141 47.015 134 65 4 14 145 14 143 1.28e-35 125
Msa1435570 MtrunA17_Chr4g0068921 59.223 103 42 0 12 114 24 126 1.34e-35 122
Msa1435570 MtrunA17_Chr2g0322521 55.769 104 46 0 12 115 29 132 2.14e-35 127
Msa1435570 MtrunA17_Chr2g0293911 59.223 103 42 0 12 114 24 126 1.01e-34 124
Msa1435570 MtrunA17_Chr4g0013361 42.361 144 77 3 8 147 6 147 1.13e-33 120
Msa1435570 MtrunA17_Chr5g0441131 42.958 142 78 3 14 153 11 151 1.36e-33 117
Msa1435570 MtrunA17_Chr5g0395221 57.955 88 37 0 1 88 1 88 2.93e-33 113
Msa1435570 MtrunA17_Chr8g0334881 46.903 113 57 2 8 119 6 116 3.55e-31 114
Msa1435570 MtrunA17_Chr5g0401731 47.200 125 65 1 14 138 15 138 4.17e-30 112
Msa1435570 MtrunA17_Chr7g0229101 67.143 70 23 0 44 113 4 73 7.76e-30 108
Msa1435570 MtrunA17_Chr7g0229131 59.459 74 30 0 44 117 4 77 4.86e-29 105
Msa1435570 MtrunA17_Chr3g0099141 49.425 87 44 0 8 94 36 122 2.11e-28 102
Msa1435570 MtrunA17_Chr3g0093811 53.409 88 41 0 44 131 14 101 1.94e-27 103
Msa1435570 MtrunA17_Chr4g0053431 50.000 102 50 1 14 115 5 105 8.13e-27 102
Msa1435570 MtrunA17_Chr4g0008551 42.857 147 67 4 14 149 38 178 1.70e-26 102
Msa1435570 MtrunA17_Chr6g0454921 47.748 111 57 1 14 124 15 124 2.30e-26 99.4
Msa1435570 MtrunA17_Chr5g0434901 63.636 66 24 0 48 113 9 74 6.09e-26 95.9
Msa1435570 MtrunA17_Chr5g0425591 51.852 81 38 1 14 93 11 91 1.67e-25 94.0
Msa1435570 MtrunA17_Chr5g0429661 33.544 158 91 4 1 146 108 263 2.79e-25 99.8
Msa1435570 MtrunA17_Chr4g0058991 45.872 109 56 2 12 119 207 313 1.31e-24 99.0
Msa1435570 MtrunA17_Chr3g0117511 44.167 120 62 3 3 119 170 287 1.51e-24 98.6
Msa1435570 MtrunA17_Chr7g0238631 37.500 168 76 6 14 159 113 273 1.73e-24 99.0
Msa1435570 MtrunA17_Chr5g0437321 46.667 105 55 1 8 112 13 116 2.47e-24 95.9
Msa1435570 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 1.27e-23 92.8
Msa1435570 MtrunA17_Chr3g0139671 37.956 137 76 4 14 142 85 220 2.39e-23 95.9
Msa1435570 MtrunA17_Chr1g0157731 42.857 105 59 1 14 118 91 194 3.08e-23 95.5
Msa1435570 MtrunA17_Chr6g0453751 47.253 91 39 2 12 93 20 110 1.99e-22 87.0
Msa1435570 MtrunA17_Chr7g0228531 43.810 105 57 2 11 115 217 319 2.50e-22 92.4
Msa1435570 MtrunA17_Chr6g0480581 33.544 158 85 6 14 161 4 151 3.64e-22 89.4
Msa1435570 MtrunA17_Chr5g0417621 39.655 116 62 3 2 116 127 235 2.18e-21 89.7
Msa1435570 MtrunA17_Chr4g0042501 39.130 115 62 3 2 115 98 205 3.29e-21 89.0
Msa1435570 MtrunA17_Chr5g0397841 44.792 96 52 1 14 109 110 204 7.81e-21 88.2
Msa1435570 MtrunA17_Chr6g0460661 39.175 97 58 1 14 110 16 111 1.47e-20 83.2
Msa1435570 MtrunA17_Chr7g0228401 43.820 89 49 1 25 113 290 377 8.74e-20 85.5
Msa1435570 MtrunA17_Chr7g0228481 40.777 103 59 2 11 113 217 317 1.21e-19 84.7
Msa1435570 MtrunA17_Chr3g0125801 40.909 110 57 3 7 115 14 116 2.22e-19 82.8
Msa1435570 MtrunA17_Chr1g0177901 42.697 89 50 1 25 113 5 92 2.92e-19 80.9
Msa1435570 MtrunA17_Chr6g0460671 35.135 148 84 4 14 150 99 245 3.81e-19 82.8
Msa1435570 MtrunA17_Chr7g0238651 34.454 119 70 2 13 123 6 124 6.56e-18 79.3
Msa1435570 MtrunA17_Chr7g0233061 38.235 102 56 2 14 113 180 276 1.64e-17 78.6
Msa1435570 MtrunA17_Chr7g0254261 35.345 116 67 3 1 115 81 189 2.04e-17 78.2
Msa1435570 MtrunA17_Chr1g0193901 59.615 52 21 0 17 68 17 68 5.29e-17 72.4
Msa1435570 MtrunA17_Chr1g0193891 59.615 52 21 0 17 68 17 68 5.29e-17 72.4
Msa1435570 MtrunA17_Chr1g0193871 59.615 52 21 0 17 68 17 68 5.29e-17 72.4
Msa1435570 MtrunA17_Chr1g0193881 59.615 52 21 0 17 68 17 68 5.29e-17 72.4
Msa1435570 MtrunA17_Chr5g0416341 35.354 99 63 1 17 115 29 126 6.62e-16 74.3
Msa1435570 MtrunA17_Chr5g0434871 60.870 46 18 0 73 118 1 46 1.38e-15 67.8
Msa1435570 MtrunA17_Chr8g0362231 36.449 107 66 2 16 122 24 128 1.54e-15 73.2
Msa1435570 MtrunA17_Chr5g0395231 54.902 51 23 0 78 128 5 55 1.79e-14 68.9
Msa1435570 MtrunA17_Chr5g0434891 61.364 44 17 0 77 120 1 44 1.85e-14 67.0
Msa1435570 MtrunA17_Chr4g0042621 62.963 54 19 1 88 141 14 66 2.94e-14 68.9
Msa1435570 MtrunA17_Chr3g0145571 96.154 26 1 0 1 26 1 26 8.50e-13 60.5
Msa1435570 MtrunA17_Chr7g0247141 54.167 48 21 1 1 47 1 48 8.98e-12 57.8
Msa1435570 MtrunA17_Chr2g0322831 56.410 39 17 0 70 108 34 72 1.28e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435570 AT4G38620.1 76.774 155 35 1 1 155 1 154 1.47e-86 255
Msa1435570 AT2G16720.1 57.547 212 48 1 1 170 1 212 1.16e-83 248
Msa1435570 AT4G09460.1 66.860 172 54 1 1 169 1 172 3.21e-83 245
Msa1435570 AT4G34990.1 62.887 194 35 2 1 157 1 194 6.81e-82 243
Msa1435570 AT1G22640.1 71.895 153 42 1 1 153 1 152 2.82e-81 241
Msa1435570 AT1G35515.1 76.471 136 32 0 1 136 1 136 4.04e-79 234
Msa1435570 AT5G16770.4 64.430 149 53 0 1 149 1 149 1.60e-69 214
Msa1435570 AT5G16770.3 64.430 149 53 0 1 149 1 149 1.60e-69 214
Msa1435570 AT5G16770.1 64.430 149 53 0 1 149 1 149 3.93e-69 213
Msa1435570 AT5G16770.2 64.430 149 53 0 1 149 1 149 3.93e-69 213
Msa1435570 AT3G02940.2 71.875 128 36 0 1 128 1 128 6.99e-68 209
Msa1435570 AT3G02940.1 71.875 128 36 0 1 128 1 128 1.06e-67 209
Msa1435570 AT3G02940.3 71.875 128 36 0 1 128 1 128 1.06e-67 209
Msa1435570 AT4G28110.1 58.896 163 52 2 1 148 1 163 3.05e-66 204
Msa1435570 AT4G21440.1 68.750 128 40 0 1 128 1 128 9.17e-66 205
Msa1435570 AT4G22680.1 60.256 156 59 1 1 156 1 153 4.53e-65 200
Msa1435570 AT3G01140.2 63.514 148 52 1 1 148 1 146 5.09e-65 202
Msa1435570 AT4G05100.1 68.992 129 39 1 1 128 1 129 8.03e-65 201
Msa1435570 AT5G15310.4 67.939 131 42 0 1 131 1 131 1.85e-64 198
Msa1435570 AT5G15310.1 67.939 131 42 0 1 131 1 131 2.74e-64 200
Msa1435570 AT5G15310.2 67.939 131 42 0 1 131 1 131 2.84e-64 200
Msa1435570 AT5G60890.1 61.745 149 50 1 1 149 1 142 7.99e-64 198
Msa1435570 AT3G61250.1 66.667 129 43 0 1 129 1 129 1.19e-63 198
Msa1435570 AT5G26660.1 57.738 168 69 1 1 166 1 168 3.69e-63 198
Msa1435570 AT3G13540.1 68.504 127 40 0 4 130 15 141 3.89e-63 195
Msa1435570 AT1G34670.1 66.406 128 43 0 1 128 1 128 5.10e-63 198
Msa1435570 AT4G12350.1 66.412 131 44 0 1 131 1 131 3.66e-62 194
Msa1435570 AT4G17785.2 68.217 129 40 1 1 128 1 129 7.26e-62 195
Msa1435570 AT4G17785.1 68.217 129 40 1 1 128 1 129 8.36e-62 195
Msa1435570 AT3G01140.1 62.759 145 52 1 4 148 47 189 8.54e-62 196
Msa1435570 AT1G57560.2 62.044 137 52 0 1 137 1 137 1.48e-61 192
Msa1435570 AT1G09540.1 63.971 136 49 0 1 136 1 136 1.52e-61 194
Msa1435570 AT1G57560.1 64.885 131 46 0 1 131 1 131 1.63e-61 193
Msa1435570 AT5G61420.2 55.689 167 65 2 1 167 1 158 5.56e-61 193
Msa1435570 AT5G54230.1 56.886 167 65 1 1 167 1 160 6.44e-61 191
Msa1435570 AT5G07690.1 64.341 129 46 0 1 129 1 129 1.61e-60 191
Msa1435570 AT4G01680.3 63.971 136 49 0 1 136 1 136 1.95e-60 187
Msa1435570 AT5G10280.1 62.500 128 48 0 1 128 1 128 4.14e-60 190
Msa1435570 AT5G16600.1 59.028 144 59 0 1 144 1 144 1.66e-59 188
Msa1435570 AT4G01680.1 63.971 136 49 0 1 136 1 136 2.01e-59 188
Msa1435570 AT5G65230.1 63.281 128 47 0 1 128 1 128 4.65e-59 186
Msa1435570 AT1G66230.1 62.791 129 48 0 1 129 1 129 2.57e-58 184
Msa1435570 AT5G07700.1 62.016 129 49 0 1 129 1 129 3.12e-58 185
Msa1435570 AT5G07700.2 62.016 129 49 0 1 129 1 129 3.12e-58 185
Msa1435570 AT1G74080.1 62.791 129 48 0 1 129 1 129 4.35e-58 184
Msa1435570 AT5G56110.1 57.554 139 59 0 1 139 1 139 7.70e-58 184
Msa1435570 AT1G18570.1 59.712 139 55 1 1 138 1 139 1.46e-57 184
Msa1435570 AT2G31180.1 57.432 148 60 1 1 145 1 148 2.54e-57 180
Msa1435570 AT5G49330.1 68.644 118 37 0 1 118 1 118 6.47e-57 182
Msa1435570 AT5G14340.1 61.069 131 51 0 1 131 13 143 1.04e-56 179
Msa1435570 AT2G47460.1 60.714 140 55 0 1 140 1 140 2.29e-56 181
Msa1435570 AT3G23250.1 50.575 174 79 2 1 169 1 172 2.31e-56 179
Msa1435570 AT3G12720.1 62.810 121 45 0 6 126 16 136 2.91e-56 179
Msa1435570 AT5G62320.1 56.081 148 58 1 2 142 3 150 4.03e-56 177
Msa1435570 AT4G01680.2 58.784 148 49 1 1 136 1 148 6.00e-56 179
Msa1435570 AT1G06180.1 70.690 116 34 0 1 116 1 116 1.22e-55 176
Msa1435570 AT1G79180.1 52.976 168 77 1 2 169 4 169 3.22e-55 176
Msa1435570 AT3G13890.2 64.407 118 42 0 1 118 1 118 7.49e-55 177
Msa1435570 AT1G16490.1 65.254 118 41 0 2 119 4 121 1.45e-54 174
Msa1435570 AT3G62610.1 64.800 125 44 0 1 125 1 125 4.73e-54 174
Msa1435570 AT1G56160.1 66.957 115 38 0 2 116 4 118 8.03e-54 172
Msa1435570 AT3G28470.1 58.779 131 54 0 1 131 1 131 2.05e-53 172
Msa1435570 AT1G74650.1 64.957 117 41 0 1 117 1 117 2.32e-53 172
Msa1435570 AT3G12820.1 64.957 117 41 0 3 119 5 121 1.72e-52 167
Msa1435570 AT3G13890.1 59.843 127 42 1 1 118 1 127 7.63e-52 169
Msa1435570 AT1G74430.1 54.225 142 61 1 1 142 1 138 7.99e-52 167
Msa1435570 AT1G08810.1 65.517 116 40 0 1 116 1 116 1.45e-51 166
Msa1435570 AT1G63910.1 54.348 138 59 1 1 138 1 134 2.06e-51 168
Msa1435570 AT3G28910.1 56.489 131 55 1 1 131 1 129 3.25e-51 167
Msa1435570 AT3G47600.1 62.069 116 44 0 1 116 1 116 1.46e-50 165
Msa1435570 AT5G62470.2 62.931 116 43 0 1 116 1 116 1.51e-50 166
Msa1435570 AT1G18710.1 52.143 140 67 0 1 140 1 140 5.57e-50 162
Msa1435570 AT5G14750.1 50.307 163 71 3 14 168 18 178 5.81e-50 160
Msa1435570 AT5G40330.1 53.103 145 57 1 14 158 14 147 1.24e-49 159
Msa1435570 AT4G37780.1 60.833 120 46 1 1 119 1 120 2.92e-49 161
Msa1435570 AT5G62470.1 62.931 116 42 1 1 116 1 115 3.60e-49 162
Msa1435570 AT5G57620.1 58.333 120 49 1 1 119 1 120 8.49e-49 160
Msa1435570 AT1G79180.2 44.279 201 77 2 2 169 4 202 3.13e-48 159
Msa1435570 AT5G65790.1 57.500 120 50 1 1 119 1 120 5.73e-48 160
Msa1435570 AT5G23000.1 59.322 118 47 1 1 117 1 118 5.94e-48 158
Msa1435570 AT3G08500.1 64.815 108 38 0 9 116 27 134 8.04e-48 158
Msa1435570 AT2G36890.1 55.118 127 56 1 1 126 1 127 9.88e-48 157
Msa1435570 AT5G12870.1 63.810 105 38 0 12 116 18 122 1.45e-47 156
Msa1435570 AT5G35550.1 66.667 105 35 0 12 116 14 118 1.49e-47 155
Msa1435570 AT2G36890.2 55.118 127 56 1 1 126 42 168 1.78e-47 157
Msa1435570 AT3G49690.1 55.833 120 52 1 1 119 1 120 4.06e-47 155
Msa1435570 AT3G27920.1 51.429 140 66 1 8 145 10 149 6.08e-46 150
Msa1435570 AT5G52600.1 60.360 111 44 0 9 119 9 119 2.31e-45 148
Msa1435570 AT3G01530.1 59.633 109 44 0 8 116 21 129 6.22e-44 144
Msa1435570 AT4G13480.1 64.706 102 36 0 14 115 8 109 1.00e-42 143
Msa1435570 AT5G55020.1 60.909 110 42 1 12 121 26 134 1.96e-42 148
Msa1435570 AT5G40350.1 51.908 131 63 0 12 142 17 147 2.35e-42 140
Msa1435570 AT3G27810.1 46.104 154 78 1 9 157 17 170 5.11e-42 140
Msa1435570 AT4G26930.1 60.194 103 41 0 12 114 19 121 1.30e-41 143
Msa1435570 AT5G26660.2 57.258 124 51 1 45 166 14 137 1.71e-41 142
Msa1435570 AT2G26960.1 57.547 106 45 0 9 114 17 122 1.83e-41 144
Msa1435570 AT5G06100.1 57.009 107 45 1 10 115 29 135 1.95e-41 144
Msa1435570 AT3G48920.1 59.406 101 41 0 14 114 20 120 2.22e-41 140
Msa1435570 AT3G24310.1 61.905 105 40 0 14 118 20 124 2.54e-41 140
Msa1435570 AT2G32460.2 58.654 104 43 0 12 115 6 109 3.65e-41 144
Msa1435570 AT2G32460.1 58.654 104 43 0 12 115 18 121 4.07e-41 144
Msa1435570 AT4G25560.1 60.577 104 41 0 14 117 12 115 4.19e-41 139
Msa1435570 AT3G30210.1 63.366 101 37 0 14 114 29 129 4.87e-41 139
Msa1435570 AT5G06100.5 57.009 107 45 1 10 115 29 135 6.60e-41 144
Msa1435570 AT5G06100.2 57.009 107 45 1 10 115 29 135 6.60e-41 144
Msa1435570 AT5G06100.3 57.009 107 45 1 10 115 29 135 6.60e-41 144
Msa1435570 AT5G06100.4 57.009 107 45 1 10 115 29 135 6.60e-41 144
Msa1435570 AT1G22640.3 65.625 96 32 1 58 153 1 95 6.83e-41 137
Msa1435570 AT3G11440.2 55.769 104 46 0 12 115 41 144 2.82e-40 141
Msa1435570 AT5G52260.1 51.449 138 62 1 14 151 14 146 3.08e-40 137
Msa1435570 AT1G48000.1 59.223 103 42 0 12 114 32 134 5.57e-40 135
Msa1435570 AT3G11440.3 55.769 104 46 0 12 115 41 144 1.00e-39 141
Msa1435570 AT3G11440.4 55.769 104 46 0 12 115 41 144 1.00e-39 141
Msa1435570 AT3G11440.1 55.769 104 46 0 12 115 41 144 1.00e-39 141
Msa1435570 AT2G47190.1 53.704 108 50 0 8 115 16 123 1.18e-39 135
Msa1435570 AT3G53200.1 61.538 104 40 0 12 115 9 112 1.88e-39 134
Msa1435570 AT1G66370.1 42.246 187 85 6 1 169 1 182 3.31e-39 134
Msa1435570 AT1G25340.1 55.752 113 50 0 14 126 20 132 3.81e-39 134
Msa1435570 AT1G68320.1 57.692 104 44 0 12 115 19 122 3.68e-37 129
Msa1435570 AT3G46130.1 53.097 113 51 1 14 124 11 123 5.10e-37 128
Msa1435570 AT5G59780.3 55.882 102 45 0 14 115 10 111 7.73e-37 127
Msa1435570 AT5G14750.3 51.095 137 54 4 40 168 13 144 9.87e-37 125
Msa1435570 AT5G49620.1 59.813 107 43 0 8 114 22 128 6.91e-36 127
Msa1435570 AT1G66380.1 60.577 104 41 0 12 115 8 111 1.58e-35 121
Msa1435570 AT1G25340.2 53.097 113 48 1 14 126 20 127 7.04e-35 123
Msa1435570 AT3G06490.1 59.223 103 42 0 12 114 19 121 9.34e-35 124
Msa1435570 AT1G25340.3 53.097 113 48 1 14 126 20 127 1.48e-34 123
Msa1435570 AT1G56650.1 59.615 104 42 0 12 115 8 111 2.99e-34 121
Msa1435570 AT1G66390.1 59.615 104 42 0 12 115 8 111 8.94e-34 120
Msa1435570 AT5G35550.2 70.130 77 23 0 40 116 45 121 1.09e-33 120
Msa1435570 AT3G12820.2 71.233 73 21 0 47 119 1 73 4.91e-33 116
Msa1435570 AT5G49620.2 52.893 121 43 1 8 114 22 142 3.87e-32 117
Msa1435570 AT2G26950.1 45.133 113 61 1 9 121 13 124 1.54e-30 114
Msa1435570 AT3G47600.2 68.056 72 23 0 45 116 39 110 2.55e-30 112
Msa1435570 AT1G71030.2 61.842 76 29 0 51 126 5 80 3.20e-30 108
Msa1435570 AT1G71030.1 61.842 76 29 0 51 126 19 94 3.55e-30 109
Msa1435570 AT3G53200.2 70.423 71 21 0 45 115 9 79 3.61e-30 109
Msa1435570 AT3G60460.1 47.368 114 57 2 7 119 6 117 3.90e-30 111
Msa1435570 AT3G46130.3 60.714 84 31 1 43 124 8 91 1.02e-29 108
Msa1435570 AT3G46130.4 62.195 82 29 1 45 124 20 101 3.50e-29 107
Msa1435570 AT5G59780.2 67.606 71 23 0 45 115 20 90 6.11e-29 106
Msa1435570 AT3G09230.1 50.926 108 44 2 14 117 55 157 2.86e-28 108
Msa1435570 AT3G27810.2 44.915 118 60 1 45 157 4 121 5.32e-28 103
Msa1435570 AT5G40350.2 50.000 98 49 0 45 142 5 102 1.08e-27 102
Msa1435570 AT5G40360.1 41.228 114 66 1 1 114 145 257 4.74e-27 104
Msa1435570 AT5G14750.4 47.059 119 53 3 58 168 1 117 6.21e-27 99.4
Msa1435570 AT5G14750.2 47.059 119 53 3 58 168 1 117 6.21e-27 99.4
Msa1435570 AT3G55730.1 52.427 103 46 2 14 115 56 156 2.03e-26 103
Msa1435570 AT1G18960.1 42.017 119 64 3 13 130 9 123 3.38e-26 101
Msa1435570 AT4G37260.1 48.039 102 52 1 14 115 13 113 9.97e-26 100
Msa1435570 AT1G66380.3 63.636 77 28 0 39 115 2 78 1.01e-25 95.1
Msa1435570 AT3G27785.1 44.037 109 60 1 7 115 182 289 1.03e-25 102
Msa1435570 AT5G11050.1 44.340 106 56 2 11 115 102 205 1.33e-25 101
Msa1435570 AT2G23290.1 49.020 102 51 1 14 115 13 113 1.82e-25 99.8
Msa1435570 AT4G18770.1 42.982 114 60 2 8 119 211 321 2.52e-25 100
Msa1435570 AT5G58850.1 44.660 103 54 2 14 115 105 205 3.46e-25 100
Msa1435570 AT3G50060.1 44.643 112 60 2 14 125 6 115 4.55e-25 98.6
Msa1435570 AT3G23250.2 44.444 117 58 2 58 169 1 115 9.65e-25 96.3
Msa1435570 AT5G67300.1 42.188 128 69 3 14 137 6 132 1.11e-24 97.4
Msa1435570 AT2G39880.1 48.113 106 46 2 14 115 50 150 1.57e-24 98.2
Msa1435570 AT5G02320.1 41.748 103 59 1 14 116 127 228 9.14e-24 97.4
Msa1435570 AT5G02320.2 41.748 103 59 1 14 116 127 228 9.14e-24 97.4
Msa1435570 AT5G02320.3 41.748 103 59 1 14 116 67 168 1.44e-23 96.7
Msa1435570 AT3G09370.1 39.855 138 68 4 14 141 130 262 2.49e-23 95.9
Msa1435570 AT5G11510.3 40.984 122 63 4 14 129 81 199 2.83e-23 95.9
Msa1435570 AT5G11510.1 40.984 122 63 4 14 129 81 199 2.83e-23 95.9
Msa1435570 AT5G11510.4 40.984 122 63 4 14 129 81 199 2.83e-23 95.9
Msa1435570 AT3G09370.2 39.855 138 68 4 14 141 135 267 2.95e-23 95.9
Msa1435570 AT3G09370.3 39.855 138 68 4 14 141 143 275 3.82e-23 95.5
Msa1435570 AT5G11510.2 40.984 122 63 4 14 129 81 199 4.50e-23 95.5
Msa1435570 AT5G11510.5 40.984 122 63 4 14 129 81 199 5.03e-23 95.1
Msa1435570 AT1G69560.2 40.367 109 62 2 9 116 118 224 8.70e-23 93.2
Msa1435570 AT1G69560.1 40.367 109 62 2 9 116 102 208 9.30e-23 92.8
Msa1435570 AT4G32730.5 41.905 105 60 1 14 118 87 190 1.52e-22 94.0
Msa1435570 AT4G32730.4 41.905 105 60 1 14 118 87 190 1.52e-22 94.0
Msa1435570 AT4G32730.3 41.905 105 60 1 14 118 87 190 1.52e-22 94.0
Msa1435570 AT4G32730.2 41.905 105 60 1 14 118 87 190 1.52e-22 94.0
Msa1435570 AT4G32730.1 41.905 105 60 1 14 118 87 190 1.63e-22 94.0
Msa1435570 AT2G25230.1 38.333 120 73 1 1 120 13 131 2.44e-22 90.1
Msa1435570 AT1G26780.1 40.952 105 59 2 12 115 96 198 3.03e-21 87.8
Msa1435570 AT1G26780.2 40.952 105 59 2 12 115 96 198 4.35e-21 88.6
Msa1435570 AT1G17950.1 39.344 122 60 4 7 121 3 117 4.55e-21 87.0
Msa1435570 AT3G29020.1 36.283 113 66 2 4 116 60 166 1.15e-20 85.5
Msa1435570 AT3G29020.2 36.283 113 66 2 4 116 62 168 1.31e-20 86.7
Msa1435570 AT4G33450.1 34.513 113 68 2 3 115 13 119 1.08e-19 83.2
Msa1435570 AT1G66380.2 51.852 81 39 0 12 92 8 88 1.64e-19 79.3
Msa1435570 AT1G22640.2 56.061 66 28 1 88 153 16 80 3.60e-19 80.5
Msa1435570 AT1G73410.1 38.739 111 60 3 6 115 3 106 5.95e-19 81.3
Msa1435570 AT1G73410.2 39.091 110 59 3 7 115 4 106 8.64e-19 80.1
Msa1435570 AT4G00540.2 34.161 161 90 4 12 159 101 258 1.66e-18 82.0
Msa1435570 AT4G00540.1 34.161 161 90 4 12 159 99 256 2.38e-18 81.6
Msa1435570 AT5G61420.1 51.724 87 33 2 81 167 2 79 6.33e-18 79.3
Msa1435570 AT5G17800.1 35.714 112 66 2 4 115 88 193 1.33e-17 78.6
Msa1435570 AT5G40430.1 34.234 111 71 1 4 114 44 152 2.07e-17 77.4
Msa1435570 AT2G37630.1 39.604 101 59 1 17 115 7 107 4.75e-17 77.4
Msa1435570 AT1G14350.2 37.000 100 62 1 16 115 27 125 3.66e-16 75.5
Msa1435570 AT1G14350.1 37.000 100 62 1 16 115 27 125 3.66e-16 75.5
Msa1435570 AT5G39700.1 36.458 96 60 1 15 110 57 151 4.24e-16 72.4
Msa1435570 AT4G28110.2 70.732 41 12 0 88 128 4 44 1.23e-15 71.6
Msa1435570 AT2G02820.2 37.000 100 62 1 16 115 32 130 1.30e-15 73.9
Msa1435570 AT2G02820.1 37.000 100 62 1 16 115 32 130 1.72e-15 73.6
Msa1435570 AT2G02820.3 37.000 100 62 1 16 115 32 130 2.60e-15 72.4
Msa1435570 AT3G46130.2 56.140 57 23 1 70 124 1 57 1.04e-14 68.9
Msa1435570 AT5G59780.1 63.043 46 17 0 70 115 1 46 2.11e-14 67.8
Msa1435570 AT5G15310.3 62.500 48 18 0 84 131 5 52 2.47e-14 68.9
Msa1435570 AT4G25560.2 62.222 45 17 0 73 117 5 49 1.64e-13 66.2
Msa1435570 AT3G28910.2 50.909 55 25 1 77 131 1 53 3.08e-12 63.2
Msa1435570 AT1G74650.3 65.854 41 14 0 77 117 1 41 3.33e-12 63.2
Msa1435570 AT5G14340.2 56.818 44 19 0 88 131 10 53 4.14e-12 62.0
Msa1435570 AT3G18100.4 34.737 95 61 1 14 108 385 478 2.54e-11 61.6
Msa1435570 AT3G18100.2 34.737 95 61 1 14 108 333 426 3.43e-11 61.2
Msa1435570 AT3G18100.1 34.737 95 61 1 14 108 546 639 3.44e-11 61.2
Msa1435570 AT3G18100.3 34.737 95 61 1 14 108 498 591 4.01e-11 60.8
Msa1435570 AT1G14350.3 41.667 60 35 0 56 115 23 82 6.88e-11 60.1
Msa1435570 AT1G14350.4 41.667 60 35 0 56 115 23 82 6.88e-11 60.1

Find 52 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAGAAGACCAGCGGCTTT+TGG 0.276032 tig0027707:-44094 None:intergenic
TATCTCATTATCTGTTCTTC+CGG 0.349660 tig0027707:-46170 None:intergenic
AAATTTCCACGTTTGAGGTC+GGG 0.376131 tig0027707:-44160 None:intergenic
TGATGAGTTGATCTTCTTGT+TGG 0.396317 tig0027707:-44186 None:intergenic
GCTAGTTCAAGATTCAAATC+AGG 0.405837 tig0027707:-46316 None:intergenic
GATGAGTTGATCTTCTTGTT+GGG 0.416784 tig0027707:-44185 None:intergenic
TTGAGAGGCATGTGAGTTGT+TGG 0.422613 tig0027707:-46247 None:intergenic
GAGCTCACGGTGAGGGATGC+TGG 0.427145 tig0027707:+44062 Msa1435570:CDS
GGGTGAAATTTCCACGTTTG+AGG 0.434633 tig0027707:-44165 None:intergenic
AATAGGTGGTCTATGATAGC+TGG 0.435766 tig0027707:+46139 Msa1435570:intron
AATTTCCACGTTTGAGGTCG+GGG 0.450441 tig0027707:-44159 None:intergenic
CGCTCTCTCCCAAAAGCCGC+TGG 0.463026 tig0027707:+44085 Msa1435570:CDS
GTCTATGATAGCTGGGAGAT+TGG 0.468880 tig0027707:+46147 Msa1435570:CDS
GCGGTAAGAGTTGCCGTCTC+CGG 0.474938 tig0027707:+44119 Msa1435570:CDS
GAAATTTCCACGTTTGAGGT+CGG 0.475714 tig0027707:-44161 None:intergenic
GCAGCTTTCCACTTGAGCTG+TGG 0.493689 tig0027707:-46293 None:intergenic
GCTTTCCACTTGAGCTGTGG+AGG 0.494051 tig0027707:-46290 None:intergenic
TGAGAGGCATGTGAGTTGTT+GGG 0.498849 tig0027707:-46246 None:intergenic
GTGATCATGTGGAGGACTAA+TGG 0.505397 tig0027707:-46338 None:intergenic
AGGTCCCCTTGCTGTGAGAA+AGG 0.505469 tig0027707:+43980 Msa1435570:CDS
GTGCTTGTGCTACAACTGAA+TGG 0.505644 tig0027707:-46361 None:intergenic
GCAGAAGAAGGTTGGTTGAG+AGG 0.515421 tig0027707:-46262 None:intergenic
ATGATAGCTGGGAGATTGGC+CGG 0.526632 tig0027707:+46151 Msa1435570:CDS
ATCAAACTCCACACTCTCCT+CGG 0.527792 tig0027707:+44208 Msa1435570:CDS
TTCTGCCTCCACAGCTCAAG+TGG 0.542917 tig0027707:+46285 Msa1435570:CDS
TGCTTGTGCTACAACTGAAT+GGG 0.545003 tig0027707:-46360 None:intergenic
ATGTGACCTTTCTCACAGCA+AGG 0.553322 tig0027707:-43986 None:intergenic
GTAAGAGTTGCCGTCTCCGG+TGG 0.558075 tig0027707:+44122 Msa1435570:CDS
TATATTAGAGCTCACGGTGA+GGG 0.561902 tig0027707:+44055 Msa1435570:CDS
GTGGAGGCAGAAGCAGAAGA+AGG 0.564048 tig0027707:-46274 None:intergenic
ATAGGTGGTCTATGATAGCT+GGG 0.564806 tig0027707:+46140 Msa1435570:intron
GATAGTTGATCCACCGGAGA+CGG 0.570793 tig0027707:-44132 None:intergenic
CTAGTTCAAGATTCAAATCA+GGG 0.575099 tig0027707:-46315 None:intergenic
GGCGGAGATAGTTGATCCAC+CGG 0.577255 tig0027707:-44138 None:intergenic
AGGCAGAAGCAGAAGAAGGT+TGG 0.579964 tig0027707:-46270 None:intergenic
CAACTGAATGGGTGATCATG+TGG 0.587879 tig0027707:-46349 None:intergenic
TGTGACCTTTCTCACAGCAA+GGG 0.590383 tig0027707:-43985 None:intergenic
GTCACATAAACAAAGGAGCA+TGG 0.592015 tig0027707:+44002 Msa1435570:CDS
CTCCGCCCCGACCTCAAACG+TGG 0.597512 tig0027707:+44154 Msa1435570:CDS
ACTTGTTACCGAGGAGAGTG+TGG 0.605689 tig0027707:-44216 None:intergenic
ATTGCTTATATTAGAGCTCA+CGG 0.619632 tig0027707:+44049 Msa1435570:CDS
TAGAATTGATCGATATGGGA+AGG 0.627128 tig0027707:+43960 None:intergenic
GTGACCTTTCTCACAGCAAG+GGG 0.637637 tig0027707:-43984 None:intergenic
GCCGCTGGTCTTCTCCGTTG+CGG 0.638238 tig0027707:+44100 Msa1435570:CDS
GACGGCAACTCTTACCGCAA+CGG 0.638283 tig0027707:-44114 None:intergenic
GAGAAAGGTCACATAAACAA+AGG 0.641117 tig0027707:+43995 Msa1435570:CDS
GTGTAGCTTACTTGTTACCG+AGG 0.652817 tig0027707:-44225 None:intergenic
TTATATTAGAGCTCACGGTG+AGG 0.670079 tig0027707:+44054 Msa1435570:CDS
GGAGCAAAGAAGAAGATGAG+CGG 0.696209 tig0027707:+44023 Msa1435570:CDS
TTCCACGTTTGAGGTCGGGG+CGG 0.705241 tig0027707:-44156 None:intergenic
ACCGCAACGGAGAAGACCAG+CGG 0.706625 tig0027707:-44101 None:intergenic
CTGAATGGGTGATCATGTGG+AGG 0.727629 tig0027707:-46346 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATTTAAAAAAATCAAAA+TGG + tig0027707:45690-45709 Msa1435570:intron 10.0%
!! ATAATGAGATAAAAAATTAT+TGG + tig0027707:46182-46201 Msa1435570:CDS 10.0%
!! TGAATTTAAAAAAATCAAAA+TGG + tig0027707:45690-45709 Msa1435570:intron 10.0%
!! ATAATGAGATAAAAAATTAT+TGG + tig0027707:46182-46201 Msa1435570:CDS 10.0%
!!! TCACTTAGATTTTTTATATA+GGG + tig0027707:44341-44360 Msa1435570:intron 15.0%
!!! AAAAAAATTAGTCTTTTGAA+AGG - tig0027707:44761-44780 None:intergenic 15.0%
!!! TTTTTTTTAAGAAGCTAAAT+TGG + tig0027707:44780-44799 Msa1435570:intron 15.0%
!!! TTATCCATTTTAACTTATAT+AGG - tig0027707:45817-45836 None:intergenic 15.0%
!! TTATTAATTACTATAATAGG+TGG + tig0027707:46125-46144 Msa1435570:intron 15.0%
!!! TCACTTAGATTTTTTATATA+GGG + tig0027707:44341-44360 Msa1435570:intron 15.0%
!!! AAAAAAATTAGTCTTTTGAA+AGG - tig0027707:44761-44780 None:intergenic 15.0%
!!! TTTTTTTTAAGAAGCTAAAT+TGG + tig0027707:44780-44799 Msa1435570:intron 15.0%
!!! TTATCCATTTTAACTTATAT+AGG - tig0027707:45817-45836 None:intergenic 15.0%
!! TTATTAATTACTATAATAGG+TGG + tig0027707:46125-46144 Msa1435570:intron 15.0%
!!! GTCACTTAGATTTTTTATAT+AGG + tig0027707:44340-44359 Msa1435570:intron 20.0%
!! ATTCAAAAAATCAAAGTAAG+TGG - tig0027707:44481-44500 None:intergenic 20.0%
!! TAGATTATACTTAGAACTTA+AGG - tig0027707:44598-44617 None:intergenic 20.0%
!!! TAAGTATAGATGGTAAATTT+TGG + tig0027707:44981-45000 Msa1435570:intron 20.0%
!! AATAAATCAATTAGAATGAG+AGG + tig0027707:45134-45153 Msa1435570:intron 20.0%
!! ATAAATCAATTAGAATGAGA+GGG + tig0027707:45135-45154 Msa1435570:intron 20.0%
!! GATAATAGAATAATTCAGTT+TGG + tig0027707:45548-45567 Msa1435570:intron 20.0%
!!! ATGATTAGGGTTTTTTTAAA+AGG + tig0027707:45580-45599 Msa1435570:intron 20.0%
!! AAGTCCTATATAAGTTAAAA+TGG + tig0027707:45810-45829 Msa1435570:intron 20.0%
!!! GTCACTTAGATTTTTTATAT+AGG + tig0027707:44340-44359 Msa1435570:intron 20.0%
!! ATTCAAAAAATCAAAGTAAG+TGG - tig0027707:44481-44500 None:intergenic 20.0%
!! TAGATTATACTTAGAACTTA+AGG - tig0027707:44598-44617 None:intergenic 20.0%
!!! TAAGTATAGATGGTAAATTT+TGG + tig0027707:44981-45000 Msa1435570:intron 20.0%
!! AATAAATCAATTAGAATGAG+AGG + tig0027707:45134-45153 Msa1435570:intron 20.0%
!! ATAAATCAATTAGAATGAGA+GGG + tig0027707:45135-45154 Msa1435570:intron 20.0%
!! GATAATAGAATAATTCAGTT+TGG + tig0027707:45548-45567 Msa1435570:intron 20.0%
!!! ATGATTAGGGTTTTTTTAAA+AGG + tig0027707:45580-45599 Msa1435570:intron 20.0%
!! AAGTCCTATATAAGTTAAAA+TGG + tig0027707:45810-45829 Msa1435570:intron 20.0%
!! AAAAATCTAAGTGACTAGTT+TGG - tig0027707:44335-44354 None:intergenic 25.0%
! ATATGAGTTAACAGTAACAA+GGG - tig0027707:44377-44396 None:intergenic 25.0%
! AATATGAGTTAACAGTAACA+AGG - tig0027707:44378-44397 None:intergenic 25.0%
!! AATTTGCTTGTAAGTATAGA+TGG + tig0027707:44971-44990 Msa1435570:intron 25.0%
!! TATAGATGGTAAATTTTGGA+CGG + tig0027707:44985-45004 Msa1435570:intron 25.0%
! TGAGACTATACAGTTAAAAA+AGG + tig0027707:45178-45197 Msa1435570:intron 25.0%
! GAGACTATACAGTTAAAAAA+GGG + tig0027707:45179-45198 Msa1435570:intron 25.0%
! AGGTTAAAGATCAAAATAGA+TGG + tig0027707:45422-45441 Msa1435570:intron 25.0%
! TAAGTACGAATGAATATGAA+AGG + tig0027707:45508-45527 Msa1435570:intron 25.0%
! TTATTAAGTCCAAATTAGTG+AGG + tig0027707:45636-45655 Msa1435570:intron 25.0%
! TATTAAGTCCAAATTAGTGA+GGG + tig0027707:45637-45656 Msa1435570:intron 25.0%
!! TCTCTAACATTTTTATACGA+GGG - tig0027707:45845-45864 None:intergenic 25.0%
!! ATCTCTAACATTTTTATACG+AGG - tig0027707:45846-45865 None:intergenic 25.0%
!! AAAAATCTAAGTGACTAGTT+TGG - tig0027707:44335-44354 None:intergenic 25.0%
! ATATGAGTTAACAGTAACAA+GGG - tig0027707:44377-44396 None:intergenic 25.0%
! AATATGAGTTAACAGTAACA+AGG - tig0027707:44378-44397 None:intergenic 25.0%
!! AATTTGCTTGTAAGTATAGA+TGG + tig0027707:44971-44990 Msa1435570:intron 25.0%
!! TATAGATGGTAAATTTTGGA+CGG + tig0027707:44985-45004 Msa1435570:intron 25.0%
! TGAGACTATACAGTTAAAAA+AGG + tig0027707:45178-45197 Msa1435570:intron 25.0%
! GAGACTATACAGTTAAAAAA+GGG + tig0027707:45179-45198 Msa1435570:intron 25.0%
! AGGTTAAAGATCAAAATAGA+TGG + tig0027707:45422-45441 Msa1435570:intron 25.0%
! TAAGTACGAATGAATATGAA+AGG + tig0027707:45508-45527 Msa1435570:intron 25.0%
! TTATTAAGTCCAAATTAGTG+AGG + tig0027707:45636-45655 Msa1435570:intron 25.0%
! TATTAAGTCCAAATTAGTGA+GGG + tig0027707:45637-45656 Msa1435570:intron 25.0%
!! TCTCTAACATTTTTATACGA+GGG - tig0027707:45845-45864 None:intergenic 25.0%
!! ATCTCTAACATTTTTATACG+AGG - tig0027707:45846-45865 None:intergenic 25.0%
ATTGCTTATATTAGAGCTCA+CGG + tig0027707:44049-44068 Msa1435570:CDS 30.0%
AAATTGCGAGAGATCAAATT+GGG - tig0027707:44280-44299 None:intergenic 30.0%
! ATTGTCTTTTCTATTGACAG+GGG - tig0027707:44428-44447 None:intergenic 30.0%
! GATTGTCTTTTCTATTGACA+GGG - tig0027707:44429-44448 None:intergenic 30.0%
ATTTGACCCAAAAAATTGTG+CGG - tig0027707:44452-44471 None:intergenic 30.0%
CAAATAGTGAGGACTAATTT+GGG - tig0027707:44527-44546 None:intergenic 30.0%
!! TTATAGAGAGCGTGAATTTT+AGG + tig0027707:45402-45421 Msa1435570:intron 30.0%
GTAAGTACGAAGAATATGAA+AGG + tig0027707:45464-45483 Msa1435570:intron 30.0%
! TTTGGAGTTAGAACATGATT+AGG + tig0027707:45566-45585 Msa1435570:intron 30.0%
TTGGAGTTAGAACATGATTA+GGG + tig0027707:45567-45586 Msa1435570:intron 30.0%
ATTAAGTCCAAATTAGTGAG+GGG + tig0027707:45638-45657 Msa1435570:intron 30.0%
! TATTGATAGTTTGATGTGTC+AGG - tig0027707:45766-45785 None:intergenic 30.0%
TATCTCATTATCTGTTCTTC+CGG - tig0027707:46173-46192 None:intergenic 30.0%
CTAGTTCAAGATTCAAATCA+GGG - tig0027707:46318-46337 None:intergenic 30.0%
ATTGCTTATATTAGAGCTCA+CGG + tig0027707:44049-44068 Msa1435570:CDS 30.0%
AAATTGCGAGAGATCAAATT+GGG - tig0027707:44280-44299 None:intergenic 30.0%
! ATTGTCTTTTCTATTGACAG+GGG - tig0027707:44428-44447 None:intergenic 30.0%
! GATTGTCTTTTCTATTGACA+GGG - tig0027707:44429-44448 None:intergenic 30.0%
ATTTGACCCAAAAAATTGTG+CGG - tig0027707:44452-44471 None:intergenic 30.0%
CAAATAGTGAGGACTAATTT+GGG - tig0027707:44527-44546 None:intergenic 30.0%
!! TTATAGAGAGCGTGAATTTT+AGG + tig0027707:45402-45421 Msa1435570:intron 30.0%
GTAAGTACGAAGAATATGAA+AGG + tig0027707:45464-45483 Msa1435570:intron 30.0%
! TTTGGAGTTAGAACATGATT+AGG + tig0027707:45566-45585 Msa1435570:intron 30.0%
TTGGAGTTAGAACATGATTA+GGG + tig0027707:45567-45586 Msa1435570:intron 30.0%
ATTAAGTCCAAATTAGTGAG+GGG + tig0027707:45638-45657 Msa1435570:intron 30.0%
! TATTGATAGTTTGATGTGTC+AGG - tig0027707:45766-45785 None:intergenic 30.0%
TATCTCATTATCTGTTCTTC+CGG - tig0027707:46173-46192 None:intergenic 30.0%
CTAGTTCAAGATTCAAATCA+GGG - tig0027707:46318-46337 None:intergenic 30.0%
GAGAAAGGTCACATAAACAA+AGG + tig0027707:43995-44014 Msa1435570:CDS 35.0%
!! GATGAGTTGATCTTCTTGTT+GGG - tig0027707:44188-44207 None:intergenic 35.0%
!! TGATGAGTTGATCTTCTTGT+TGG - tig0027707:44189-44208 None:intergenic 35.0%
GAAATTGCGAGAGATCAAAT+TGG - tig0027707:44281-44300 None:intergenic 35.0%
! TTTGTCTAAGACTAGTTGCA+AGG - tig0027707:44303-44322 None:intergenic 35.0%
! GGATTGTCTTTTCTATTGAC+AGG - tig0027707:44430-44449 None:intergenic 35.0%
!!! ACAATCCCGCACAATTTTTT+GGG + tig0027707:44443-44462 Msa1435570:intron 35.0%
TTTGACCCAAAAAATTGTGC+GGG - tig0027707:44451-44470 None:intergenic 35.0%
CCAAATAGTGAGGACTAATT+TGG - tig0027707:44528-44547 None:intergenic 35.0%
CCAAATTAGTCCTCACTATT+TGG + tig0027707:44525-44544 Msa1435570:intron 35.0%
! ATGCTTTGTTCCAAATAGTG+AGG - tig0027707:44538-44557 None:intergenic 35.0%
GTGATGAAGGAGAAATGAAT+GGG - tig0027707:44571-44590 None:intergenic 35.0%
ACATCGAGAATTAGAGAAGA+AGG + tig0027707:44655-44674 Msa1435570:intron 35.0%
! TACATGCTTACATGTCCTTT+TGG + tig0027707:44679-44698 Msa1435570:intron 35.0%
CTGAAGTAGTGAAATCCAAA+AGG - tig0027707:44697-44716 None:intergenic 35.0%
GATTCCGTGTCAATTTAGAT+GGG - tig0027707:44806-44825 None:intergenic 35.0%
GAATCGAACATGAAACTTTG+AGG + tig0027707:44821-44840 Msa1435570:intron 35.0%
TTAGAATGAGAGGGATCTTA+AGG + tig0027707:45144-45163 Msa1435570:intron 35.0%
!!! TGTTTGACTTGGAGAACTTT+TGG + tig0027707:45277-45296 Msa1435570:intron 35.0%
!!! GTTTGACTTGGAGAACTTTT+GGG + tig0027707:45278-45297 Msa1435570:intron 35.0%
ACATTGAAAAGACTCGTGTA+TGG + tig0027707:45338-45357 Msa1435570:intron 35.0%
TAACACCTCGTAATACTTTC+AGG - tig0027707:45385-45404 None:intergenic 35.0%
GTACGAATGAATATGAAAGG+TGG + tig0027707:45511-45530 Msa1435570:intron 35.0%
TTATTCTATTATCCCCCTCT+TGG - tig0027707:45541-45560 None:intergenic 35.0%
ACAGTGGGAAACAAAAATTG+GGG - tig0027707:45731-45750 None:intergenic 35.0%
CACAGTGGGAAACAAAAATT+GGG - tig0027707:45732-45751 None:intergenic 35.0%
AGGTAAAATTATGCCACAGT+GGG - tig0027707:45746-45765 None:intergenic 35.0%
GCTAGTTCAAGATTCAAATC+AGG - tig0027707:46319-46338 None:intergenic 35.0%
GAGAAAGGTCACATAAACAA+AGG + tig0027707:43995-44014 Msa1435570:CDS 35.0%
!! GATGAGTTGATCTTCTTGTT+GGG - tig0027707:44188-44207 None:intergenic 35.0%
!! TGATGAGTTGATCTTCTTGT+TGG - tig0027707:44189-44208 None:intergenic 35.0%
GAAATTGCGAGAGATCAAAT+TGG - tig0027707:44281-44300 None:intergenic 35.0%
! TTTGTCTAAGACTAGTTGCA+AGG - tig0027707:44303-44322 None:intergenic 35.0%
! GGATTGTCTTTTCTATTGAC+AGG - tig0027707:44430-44449 None:intergenic 35.0%
!!! ACAATCCCGCACAATTTTTT+GGG + tig0027707:44443-44462 Msa1435570:intron 35.0%
TTTGACCCAAAAAATTGTGC+GGG - tig0027707:44451-44470 None:intergenic 35.0%
CCAAATAGTGAGGACTAATT+TGG - tig0027707:44528-44547 None:intergenic 35.0%
CCAAATTAGTCCTCACTATT+TGG + tig0027707:44525-44544 Msa1435570:intron 35.0%
! ATGCTTTGTTCCAAATAGTG+AGG - tig0027707:44538-44557 None:intergenic 35.0%
GTGATGAAGGAGAAATGAAT+GGG - tig0027707:44571-44590 None:intergenic 35.0%
ACATCGAGAATTAGAGAAGA+AGG + tig0027707:44655-44674 Msa1435570:intron 35.0%
! TACATGCTTACATGTCCTTT+TGG + tig0027707:44679-44698 Msa1435570:intron 35.0%
CTGAAGTAGTGAAATCCAAA+AGG - tig0027707:44697-44716 None:intergenic 35.0%
GATTCCGTGTCAATTTAGAT+GGG - tig0027707:44806-44825 None:intergenic 35.0%
GAATCGAACATGAAACTTTG+AGG + tig0027707:44821-44840 Msa1435570:intron 35.0%
TTAGAATGAGAGGGATCTTA+AGG + tig0027707:45144-45163 Msa1435570:intron 35.0%
!!! TGTTTGACTTGGAGAACTTT+TGG + tig0027707:45277-45296 Msa1435570:intron 35.0%
!!! GTTTGACTTGGAGAACTTTT+GGG + tig0027707:45278-45297 Msa1435570:intron 35.0%
ACATTGAAAAGACTCGTGTA+TGG + tig0027707:45338-45357 Msa1435570:intron 35.0%
TAACACCTCGTAATACTTTC+AGG - tig0027707:45385-45404 None:intergenic 35.0%
GTACGAATGAATATGAAAGG+TGG + tig0027707:45511-45530 Msa1435570:intron 35.0%
TTATTCTATTATCCCCCTCT+TGG - tig0027707:45541-45560 None:intergenic 35.0%
ACAGTGGGAAACAAAAATTG+GGG - tig0027707:45731-45750 None:intergenic 35.0%
CACAGTGGGAAACAAAAATT+GGG - tig0027707:45732-45751 None:intergenic 35.0%
AGGTAAAATTATGCCACAGT+GGG - tig0027707:45746-45765 None:intergenic 35.0%
GCTAGTTCAAGATTCAAATC+AGG - tig0027707:46319-46338 None:intergenic 35.0%
GTCACATAAACAAAGGAGCA+TGG + tig0027707:44002-44021 Msa1435570:CDS 40.0%
TTATATTAGAGCTCACGGTG+AGG + tig0027707:44054-44073 Msa1435570:CDS 40.0%
TATATTAGAGCTCACGGTGA+GGG + tig0027707:44055-44074 Msa1435570:CDS 40.0%
! AAATTTCCACGTTTGAGGTC+GGG - tig0027707:44163-44182 None:intergenic 40.0%
! GAAATTTCCACGTTTGAGGT+CGG - tig0027707:44164-44183 None:intergenic 40.0%
!!! GACAATCCCGCACAATTTTT+TGG + tig0027707:44442-44461 Msa1435570:intron 40.0%
CGTGATGAAGGAGAAATGAA+TGG - tig0027707:44572-44591 None:intergenic 40.0%
AACTTAAGGTCTCGTGATGA+AGG - tig0027707:44584-44603 None:intergenic 40.0%
TTGGCCCATCTAAATTGACA+CGG + tig0027707:44799-44818 Msa1435570:intron 40.0%
CGATTCCGTGTCAATTTAGA+TGG - tig0027707:44807-44826 None:intergenic 40.0%
! TTTTGGACGGCTAACAACTT+AGG + tig0027707:44998-45017 Msa1435570:intron 40.0%
AACAAGTCACGTGCAATAAG+TGG + tig0027707:45075-45094 Msa1435570:intron 40.0%
TCATGGTATGCTTGTAAGCA+AGG + tig0027707:45099-45118 Msa1435570:intron 40.0%
AGAACTCCATGTGTTTGACT+TGG + tig0027707:45266-45285 Msa1435570:intron 40.0%
AGTTCTCCAAGTCAAACACA+TGG - tig0027707:45275-45294 None:intergenic 40.0%
AAAGACTCGTGTATGGTTTG+TGG + tig0027707:45345-45364 Msa1435570:intron 40.0%
! AAGACTCGTGTATGGTTTGT+GGG + tig0027707:45346-45365 Msa1435570:intron 40.0%
!! GCAATCCTGAAAGTATTACG+AGG + tig0027707:45377-45396 Msa1435570:intron 40.0%
TAATCAGCCCCTCACTAATT+TGG - tig0027707:45648-45667 None:intergenic 40.0%
CCACAGTGGGAAACAAAAAT+TGG - tig0027707:45733-45752 None:intergenic 40.0%
!! CCAATTTTTGTTTCCCACTG+TGG + tig0027707:45730-45749 Msa1435570:intron 40.0%
CAGGTAAAATTATGCCACAG+TGG - tig0027707:45747-45766 None:intergenic 40.0%
AATAGGTGGTCTATGATAGC+TGG + tig0027707:46139-46158 Msa1435570:intron 40.0%
ATAGGTGGTCTATGATAGCT+GGG + tig0027707:46140-46159 Msa1435570:intron 40.0%
! AGAAAGAAGCTTTTGAGCAG+AGG + tig0027707:46217-46236 Msa1435570:CDS 40.0%
TGCTTGTGCTACAACTGAAT+GGG - tig0027707:46363-46382 None:intergenic 40.0%
GTCACATAAACAAAGGAGCA+TGG + tig0027707:44002-44021 Msa1435570:CDS 40.0%
TTATATTAGAGCTCACGGTG+AGG + tig0027707:44054-44073 Msa1435570:CDS 40.0%
TATATTAGAGCTCACGGTGA+GGG + tig0027707:44055-44074 Msa1435570:CDS 40.0%
! AAATTTCCACGTTTGAGGTC+GGG - tig0027707:44163-44182 None:intergenic 40.0%
! GAAATTTCCACGTTTGAGGT+CGG - tig0027707:44164-44183 None:intergenic 40.0%
!!! GACAATCCCGCACAATTTTT+TGG + tig0027707:44442-44461 Msa1435570:intron 40.0%
CGTGATGAAGGAGAAATGAA+TGG - tig0027707:44572-44591 None:intergenic 40.0%
AACTTAAGGTCTCGTGATGA+AGG - tig0027707:44584-44603 None:intergenic 40.0%
TTGGCCCATCTAAATTGACA+CGG + tig0027707:44799-44818 Msa1435570:intron 40.0%
CGATTCCGTGTCAATTTAGA+TGG - tig0027707:44807-44826 None:intergenic 40.0%
! TTTTGGACGGCTAACAACTT+AGG + tig0027707:44998-45017 Msa1435570:intron 40.0%
AACAAGTCACGTGCAATAAG+TGG + tig0027707:45075-45094 Msa1435570:intron 40.0%
TCATGGTATGCTTGTAAGCA+AGG + tig0027707:45099-45118 Msa1435570:intron 40.0%
AGAACTCCATGTGTTTGACT+TGG + tig0027707:45266-45285 Msa1435570:intron 40.0%
AGTTCTCCAAGTCAAACACA+TGG - tig0027707:45275-45294 None:intergenic 40.0%
AAAGACTCGTGTATGGTTTG+TGG + tig0027707:45345-45364 Msa1435570:intron 40.0%
! AAGACTCGTGTATGGTTTGT+GGG + tig0027707:45346-45365 Msa1435570:intron 40.0%
!! GCAATCCTGAAAGTATTACG+AGG + tig0027707:45377-45396 Msa1435570:intron 40.0%
TAATCAGCCCCTCACTAATT+TGG - tig0027707:45648-45667 None:intergenic 40.0%
CCACAGTGGGAAACAAAAAT+TGG - tig0027707:45733-45752 None:intergenic 40.0%
!! CCAATTTTTGTTTCCCACTG+TGG + tig0027707:45730-45749 Msa1435570:intron 40.0%
CAGGTAAAATTATGCCACAG+TGG - tig0027707:45747-45766 None:intergenic 40.0%
AATAGGTGGTCTATGATAGC+TGG + tig0027707:46139-46158 Msa1435570:intron 40.0%
ATAGGTGGTCTATGATAGCT+GGG + tig0027707:46140-46159 Msa1435570:intron 40.0%
! AGAAAGAAGCTTTTGAGCAG+AGG + tig0027707:46217-46236 Msa1435570:CDS 40.0%
TGCTTGTGCTACAACTGAAT+GGG - tig0027707:46363-46382 None:intergenic 40.0%
TGTGACCTTTCTCACAGCAA+GGG - tig0027707:43988-44007 None:intergenic 45.0%
ATGTGACCTTTCTCACAGCA+AGG - tig0027707:43989-44008 None:intergenic 45.0%
GGAGCAAAGAAGAAGATGAG+CGG + tig0027707:44023-44042 Msa1435570:CDS 45.0%
! AATTTCCACGTTTGAGGTCG+GGG - tig0027707:44162-44181 None:intergenic 45.0%
GGGTGAAATTTCCACGTTTG+AGG - tig0027707:44168-44187 None:intergenic 45.0%
ATCAAACTCCACACTCTCCT+CGG + tig0027707:44208-44227 Msa1435570:CDS 45.0%
! GTGTAGCTTACTTGTTACCG+AGG - tig0027707:44228-44247 None:intergenic 45.0%
!! TGATCTGGTGGTATTGGCTT+GGG - tig0027707:44865-44884 None:intergenic 45.0%
!! TTGATCTGGTGGTATTGGCT+TGG - tig0027707:44866-44885 None:intergenic 45.0%
! TTGCGTTGATCTGGTGGTAT+TGG - tig0027707:44871-44890 None:intergenic 45.0%
ACGGCTAACAACTTAGGAAG+AGG + tig0027707:45004-45023 Msa1435570:intron 45.0%
CACGTGCAATAAGTGGTTCA+TGG + tig0027707:45082-45101 Msa1435570:intron 45.0%
!! GACTTGGAGAACTTTTGGGA+TGG + tig0027707:45282-45301 Msa1435570:intron 45.0%
!!! TTTTGGGATGGATGACCTTC+TGG + tig0027707:45294-45313 Msa1435570:intron 45.0%
TCGTCACTCAACTTTCCAGA+AGG - tig0027707:45312-45331 None:intergenic 45.0%
! AGACTCGTGTATGGTTTGTG+GGG + tig0027707:45347-45366 Msa1435570:intron 45.0%
TTCTATTATCCCCCTCTTGG+AGG - tig0027707:45538-45557 None:intergenic 45.0%
GTCTATGATAGCTGGGAGAT+TGG + tig0027707:46147-46166 Msa1435570:CDS 45.0%
! TGAGAGGCATGTGAGTTGTT+GGG - tig0027707:46249-46268 None:intergenic 45.0%
! TTGAGAGGCATGTGAGTTGT+TGG - tig0027707:46250-46269 None:intergenic 45.0%
GTGATCATGTGGAGGACTAA+TGG - tig0027707:46341-46360 None:intergenic 45.0%
CAACTGAATGGGTGATCATG+TGG - tig0027707:46352-46371 None:intergenic 45.0%
GTGCTTGTGCTACAACTGAA+TGG - tig0027707:46364-46383 None:intergenic 45.0%
TGTGACCTTTCTCACAGCAA+GGG - tig0027707:43988-44007 None:intergenic 45.0%
ATGTGACCTTTCTCACAGCA+AGG - tig0027707:43989-44008 None:intergenic 45.0%
GGAGCAAAGAAGAAGATGAG+CGG + tig0027707:44023-44042 Msa1435570:CDS 45.0%
! AATTTCCACGTTTGAGGTCG+GGG - tig0027707:44162-44181 None:intergenic 45.0%
GGGTGAAATTTCCACGTTTG+AGG - tig0027707:44168-44187 None:intergenic 45.0%
ATCAAACTCCACACTCTCCT+CGG + tig0027707:44208-44227 Msa1435570:CDS 45.0%
! GTGTAGCTTACTTGTTACCG+AGG - tig0027707:44228-44247 None:intergenic 45.0%
!! TGATCTGGTGGTATTGGCTT+GGG - tig0027707:44865-44884 None:intergenic 45.0%
!! TTGATCTGGTGGTATTGGCT+TGG - tig0027707:44866-44885 None:intergenic 45.0%
! TTGCGTTGATCTGGTGGTAT+TGG - tig0027707:44871-44890 None:intergenic 45.0%
ACGGCTAACAACTTAGGAAG+AGG + tig0027707:45004-45023 Msa1435570:intron 45.0%
CACGTGCAATAAGTGGTTCA+TGG + tig0027707:45082-45101 Msa1435570:intron 45.0%
!! GACTTGGAGAACTTTTGGGA+TGG + tig0027707:45282-45301 Msa1435570:intron 45.0%
!!! TTTTGGGATGGATGACCTTC+TGG + tig0027707:45294-45313 Msa1435570:intron 45.0%
TCGTCACTCAACTTTCCAGA+AGG - tig0027707:45312-45331 None:intergenic 45.0%
! AGACTCGTGTATGGTTTGTG+GGG + tig0027707:45347-45366 Msa1435570:intron 45.0%
TTCTATTATCCCCCTCTTGG+AGG - tig0027707:45538-45557 None:intergenic 45.0%
GTCTATGATAGCTGGGAGAT+TGG + tig0027707:46147-46166 Msa1435570:CDS 45.0%
! TGAGAGGCATGTGAGTTGTT+GGG - tig0027707:46249-46268 None:intergenic 45.0%
! TTGAGAGGCATGTGAGTTGT+TGG - tig0027707:46250-46269 None:intergenic 45.0%
GTGATCATGTGGAGGACTAA+TGG - tig0027707:46341-46360 None:intergenic 45.0%
CAACTGAATGGGTGATCATG+TGG - tig0027707:46352-46371 None:intergenic 45.0%
GTGCTTGTGCTACAACTGAA+TGG - tig0027707:46364-46383 None:intergenic 45.0%
!!! ATTATTTTTTGTATTAAATT+AGG + tig0027707:45875-45894 Msa1435570:intron 5.0%
!! TATTTATTAATTACTATAAT+AGG + tig0027707:46122-46141 Msa1435570:intron 5.0%
!!! ATTATTTTTTGTATTAAATT+AGG + tig0027707:45875-45894 Msa1435570:intron 5.0%
!! TATTTATTAATTACTATAAT+AGG + tig0027707:46122-46141 Msa1435570:intron 5.0%
GTGACCTTTCTCACAGCAAG+GGG - tig0027707:43987-44006 None:intergenic 50.0%
GATAGTTGATCCACCGGAGA+CGG - tig0027707:44135-44154 None:intergenic 50.0%
! ACTTGTTACCGAGGAGAGTG+TGG - tig0027707:44219-44238 None:intergenic 50.0%
TTGACAGGGGTAACTGAGAG+CGG - tig0027707:44415-44434 None:intergenic 50.0%
AGAGCCTCATCATCTCTCAG+CGG + tig0027707:44715-44734 Msa1435570:intron 50.0%
TACCACCAGATCAACGCAAG+TGG + tig0027707:44872-44891 Msa1435570:intron 50.0%
ACCACCAGATCAACGCAAGT+GGG + tig0027707:44873-44892 Msa1435570:intron 50.0%
! GAAACCCACTTGCGTTGATC+TGG - tig0027707:44880-44899 None:intergenic 50.0%
! TGTGTTACGCTGGTTGACGA+GGG + tig0027707:45033-45052 Msa1435570:intron 50.0%
ATGAAAGGTGGACCTCCAAG+AGG + tig0027707:45523-45542 Msa1435570:intron 50.0%
TGAAAGGTGGACCTCCAAGA+GGG + tig0027707:45524-45543 Msa1435570:intron 50.0%
ATGATAGCTGGGAGATTGGC+CGG + tig0027707:46151-46170 Msa1435570:CDS 50.0%
! GCAGAAGAAGGTTGGTTGAG+AGG - tig0027707:46265-46284 None:intergenic 50.0%
AGGCAGAAGCAGAAGAAGGT+TGG - tig0027707:46273-46292 None:intergenic 50.0%
CTGAATGGGTGATCATGTGG+AGG - tig0027707:46349-46368 None:intergenic 50.0%
GTGACCTTTCTCACAGCAAG+GGG - tig0027707:43987-44006 None:intergenic 50.0%
GATAGTTGATCCACCGGAGA+CGG - tig0027707:44135-44154 None:intergenic 50.0%
! ACTTGTTACCGAGGAGAGTG+TGG - tig0027707:44219-44238 None:intergenic 50.0%
TTGACAGGGGTAACTGAGAG+CGG - tig0027707:44415-44434 None:intergenic 50.0%
AGAGCCTCATCATCTCTCAG+CGG + tig0027707:44715-44734 Msa1435570:intron 50.0%
TACCACCAGATCAACGCAAG+TGG + tig0027707:44872-44891 Msa1435570:intron 50.0%
ACCACCAGATCAACGCAAGT+GGG + tig0027707:44873-44892 Msa1435570:intron 50.0%
! GAAACCCACTTGCGTTGATC+TGG - tig0027707:44880-44899 None:intergenic 50.0%
! TGTGTTACGCTGGTTGACGA+GGG + tig0027707:45033-45052 Msa1435570:intron 50.0%
ATGAAAGGTGGACCTCCAAG+AGG + tig0027707:45523-45542 Msa1435570:intron 50.0%
TGAAAGGTGGACCTCCAAGA+GGG + tig0027707:45524-45543 Msa1435570:intron 50.0%
ATGATAGCTGGGAGATTGGC+CGG + tig0027707:46151-46170 Msa1435570:CDS 50.0%
! GCAGAAGAAGGTTGGTTGAG+AGG - tig0027707:46265-46284 None:intergenic 50.0%
AGGCAGAAGCAGAAGAAGGT+TGG - tig0027707:46273-46292 None:intergenic 50.0%
CTGAATGGGTGATCATGTGG+AGG - tig0027707:46349-46368 None:intergenic 50.0%
! AGGTCCCCTTGCTGTGAGAA+AGG + tig0027707:43980-43999 Msa1435570:CDS 55.0%
! GGAGAAGACCAGCGGCTTTT+GGG - tig0027707:44096-44115 None:intergenic 55.0%
GACGGCAACTCTTACCGCAA+CGG - tig0027707:44117-44136 None:intergenic 55.0%
GGCGGAGATAGTTGATCCAC+CGG - tig0027707:44141-44160 None:intergenic 55.0%
GAGCCTCATCATCTCTCAGC+GGG + tig0027707:44716-44735 Msa1435570:intron 55.0%
TCACCCGCTGAGAGATGATG+AGG - tig0027707:44722-44741 None:intergenic 55.0%
! TTGAGGAGAAGCACACTCCC+AGG + tig0027707:44838-44857 Msa1435570:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - tig0027707:44858-44877 None:intergenic 55.0%
! ACCCACTTGCGTTGATCTGG+TGG - tig0027707:44877-44896 None:intergenic 55.0%
GAGGATCGAGTGTGTTACGC+TGG + tig0027707:45023-45042 Msa1435570:intron 55.0%
! GTGTGTTACGCTGGTTGACG+AGG + tig0027707:45032-45051 Msa1435570:intron 55.0%
GAAAGGTGGACCTCCAAGAG+GGG + tig0027707:45525-45544 Msa1435570:intron 55.0%
AAAGGTGGACCTCCAAGAGG+GGG + tig0027707:45526-45545 Msa1435570:intron 55.0%
GTGGAGGCAGAAGCAGAAGA+AGG - tig0027707:46277-46296 None:intergenic 55.0%
TTCTGCCTCCACAGCTCAAG+TGG + tig0027707:46285-46304 Msa1435570:CDS 55.0%
GCTTTCCACTTGAGCTGTGG+AGG - tig0027707:46293-46312 None:intergenic 55.0%
GCAGCTTTCCACTTGAGCTG+TGG - tig0027707:46296-46315 None:intergenic 55.0%
! AGGTCCCCTTGCTGTGAGAA+AGG + tig0027707:43980-43999 Msa1435570:CDS 55.0%
! GGAGAAGACCAGCGGCTTTT+GGG - tig0027707:44096-44115 None:intergenic 55.0%
GACGGCAACTCTTACCGCAA+CGG - tig0027707:44117-44136 None:intergenic 55.0%
GGCGGAGATAGTTGATCCAC+CGG - tig0027707:44141-44160 None:intergenic 55.0%
GAGCCTCATCATCTCTCAGC+GGG + tig0027707:44716-44735 Msa1435570:intron 55.0%
TCACCCGCTGAGAGATGATG+AGG - tig0027707:44722-44741 None:intergenic 55.0%
! TTGAGGAGAAGCACACTCCC+AGG + tig0027707:44838-44857 Msa1435570:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - tig0027707:44858-44877 None:intergenic 55.0%
! ACCCACTTGCGTTGATCTGG+TGG - tig0027707:44877-44896 None:intergenic 55.0%
GAGGATCGAGTGTGTTACGC+TGG + tig0027707:45023-45042 Msa1435570:intron 55.0%
! GTGTGTTACGCTGGTTGACG+AGG + tig0027707:45032-45051 Msa1435570:intron 55.0%
GAAAGGTGGACCTCCAAGAG+GGG + tig0027707:45525-45544 Msa1435570:intron 55.0%
AAAGGTGGACCTCCAAGAGG+GGG + tig0027707:45526-45545 Msa1435570:intron 55.0%
GTGGAGGCAGAAGCAGAAGA+AGG - tig0027707:46277-46296 None:intergenic 55.0%
TTCTGCCTCCACAGCTCAAG+TGG + tig0027707:46285-46304 Msa1435570:CDS 55.0%
GCTTTCCACTTGAGCTGTGG+AGG - tig0027707:46293-46312 None:intergenic 55.0%
GCAGCTTTCCACTTGAGCTG+TGG - tig0027707:46296-46315 None:intergenic 55.0%
! CGGAGAAGACCAGCGGCTTT+TGG - tig0027707:44097-44116 None:intergenic 60.0%
ACCGCAACGGAGAAGACCAG+CGG - tig0027707:44104-44123 None:intergenic 60.0%
GCGGTAAGAGTTGCCGTCTC+CGG + tig0027707:44119-44138 Msa1435570:CDS 60.0%
GTAAGAGTTGCCGTCTCCGG+TGG + tig0027707:44122-44141 Msa1435570:CDS 60.0%
! TTCCACGTTTGAGGTCGGGG+CGG - tig0027707:44159-44178 None:intergenic 60.0%
CTCAGCGGGTGAGCTTGTCA+CGG + tig0027707:44730-44749 Msa1435570:intron 60.0%
!! GGTGGTATTGGCTTGGGACC+TGG - tig0027707:44859-44878 None:intergenic 60.0%
! GTTACGCTGGTTGACGAGGG+CGG + tig0027707:45036-45055 Msa1435570:intron 60.0%
! CGGAGAAGACCAGCGGCTTT+TGG - tig0027707:44097-44116 None:intergenic 60.0%
ACCGCAACGGAGAAGACCAG+CGG - tig0027707:44104-44123 None:intergenic 60.0%
GCGGTAAGAGTTGCCGTCTC+CGG + tig0027707:44119-44138 Msa1435570:CDS 60.0%
GTAAGAGTTGCCGTCTCCGG+TGG + tig0027707:44122-44141 Msa1435570:CDS 60.0%
! TTCCACGTTTGAGGTCGGGG+CGG - tig0027707:44159-44178 None:intergenic 60.0%
CTCAGCGGGTGAGCTTGTCA+CGG + tig0027707:44730-44749 Msa1435570:intron 60.0%
!! GGTGGTATTGGCTTGGGACC+TGG - tig0027707:44859-44878 None:intergenic 60.0%
! GTTACGCTGGTTGACGAGGG+CGG + tig0027707:45036-45055 Msa1435570:intron 60.0%
GAGCTCACGGTGAGGGATGC+TGG + tig0027707:44062-44081 Msa1435570:CDS 65.0%
CGCTCTCTCCCAAAAGCCGC+TGG + tig0027707:44085-44104 Msa1435570:CDS 65.0%
!! GCCGCTGGTCTTCTCCGTTG+CGG + tig0027707:44100-44119 Msa1435570:CDS 65.0%
GAGCTCACGGTGAGGGATGC+TGG + tig0027707:44062-44081 Msa1435570:CDS 65.0%
CGCTCTCTCCCAAAAGCCGC+TGG + tig0027707:44085-44104 Msa1435570:CDS 65.0%
!! GCCGCTGGTCTTCTCCGTTG+CGG + tig0027707:44100-44119 Msa1435570:CDS 65.0%
CTCCGCCCCGACCTCAAACG+TGG + tig0027707:44154-44173 Msa1435570:CDS 70.0%
CTCCGCCCCGACCTCAAACG+TGG + tig0027707:44154-44173 Msa1435570:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0027707 gene 43974 46396 43974 ID=Msa1435570;Name=Msa1435570
tig0027707 mRNA 43974 46396 43974 ID=Msa1435570-mRNA-1;Parent=Msa1435570;Name=Msa1435570-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|171
tig0027707 exon 43974 44236 43974 ID=Msa1435570-mRNA-1:exon:9744;Parent=Msa1435570-mRNA-1
tig0027707 exon 46144 46396 46144 ID=Msa1435570-mRNA-1:exon:9745;Parent=Msa1435570-mRNA-1
tig0027707 CDS 43974 44236 43974 ID=Msa1435570-mRNA-1:cds;Parent=Msa1435570-mRNA-1
tig0027707 CDS 46144 46396 46144 ID=Msa1435570-mRNA-1:cds;Parent=Msa1435570-mRNA-1
Gene Sequence

>Msa1435570

ATGGGAAGGTCCCCTTGCTGTGAGAAAGGTCACATAAACAAAGGAGCATGGAGCAAAGAAGAAGATGAGCGGCTGATTGCTTATATTAGAGCTCACGGTGAGGGATGCTGGCGCTCTCTCCCAAAAGCCGCTGGTCTTCTCCGTTGCGGTAAGAGTTGCCGTCTCCGGTGGATCAACTATCTCCGCCCCGACCTCAAACGTGGAAATTTCACCCAACAAGAAGATCAACTCATCATCAAACTCCACACTCTCCTCGGTAACAAGTGGTCTATGATAGCTGGGAGATTGGCCGGAAGAACAGATAATGAGATAAAAAATTATTGGAATACACATTTAAGAAAGAAGCTTTTGAGCAGAGGAATTGACCCAACAACTCACATGCCTCTCAACCAACCTTCTTCTGCTTCTGCCTCCACAGCTCAAGTGGAAAGCTGCCCTGATTTGAATCTTGAACTAGCCATTAGTCCTCCACATGATCACCCATTCAGTTGTAGCACAAGCACTGCTACTGCTTAA
Protein sequence

>Msa1435570

MGRSPCCEKGHINKGAWSKEEDERLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQQEDQLIIKLHTLLGNKWSMIAGRLAGRTDNEIKNYWNTHLRKKLLSRGIDPTTHMPLNQPSSASASTAQVESCPDLNLELAISPPHDHPFSCSTSTATA*