Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439970 | XP_003609679.1 | 98.610 | 863 | 12 | 0 | 2 | 864 | 1 | 863 | 0.0 | 1779 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439970 | sp|Q920G9|GMCL1_MOUSE | 26.295 | 251 | 167 | 6 | 48 | 294 | 87 | 323 | 9.33e-15 | 81.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439970 | G7JLI1 | 98.610 | 863 | 12 | 0 | 2 | 864 | 1 | 863 | 0.0 | 1779 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1439970 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1217850 | Msa1439970 | 0.949498 | 1.126238e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439970 | MtrunA17_Chr4g0067401 | 98.610 | 863 | 12 | 0 | 2 | 864 | 1 | 863 | 0.0 | 1779 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439970 | AT4G15840.1 | 59.237 | 839 | 288 | 16 | 35 | 864 | 43 | 836 | 0.0 | 928 |
| Msa1439970 | AT4G15840.2 | 56.342 | 749 | 273 | 16 | 35 | 774 | 43 | 746 | 0.0 | 767 |
Find 272 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCCTTGGCATATCTTTA+TGG | 0.134615 | tig0028916:-33418 | Msa1439970:CDS |
| CATTATTATCATTAAGTTTA+GGG | 0.245800 | tig0028916:+33389 | None:intergenic |
| GCATTATTATCATTAAGTTT+AGG | 0.249784 | tig0028916:+33388 | None:intergenic |
| GCACTACAGCAATAACTCTT+AGG | 0.253937 | tig0028916:+28933 | None:intergenic |
| TCTCCCGCAGTTCATATTTC+AGG | 0.259529 | tig0028916:-34111 | Msa1439970:intron |
| CGCTTCCTTTCTCGACCTTC+AGG | 0.263772 | tig0028916:-33347 | Msa1439970:intron |
| CAAATTGAAGGTTTCAATTC+CGG | 0.268850 | tig0028916:-34196 | Msa1439970:CDS |
| CATTGTTATCATCGATTTGC+AGG | 0.269175 | tig0028916:+33461 | None:intergenic |
| GAATCTTCAGGTCAGTATTC+AGG | 0.272395 | tig0028916:-29696 | Msa1439970:intron |
| TTCAAACTTCTTGGCTTATC+AGG | 0.272512 | tig0028916:-33135 | Msa1439970:intron |
| AGCAGCACTGGCTTCTTTCC+AGG | 0.278200 | tig0028916:+33492 | None:intergenic |
| CCCCATCCTTTAGGAGCTTT+AGG | 0.283620 | tig0028916:+29010 | None:intergenic |
| CTTAGCCAGGGAGGGAATTA+TGG | 0.289922 | tig0028916:-30992 | Msa1439970:CDS |
| TACCAAGGGTGCGCCGTCCC+TGG | 0.292685 | tig0028916:+29654 | None:intergenic |
| TTGCCTTGGCATATCTTTAT+GGG | 0.305502 | tig0028916:-33417 | Msa1439970:CDS |
| GGTGAAGGAGGAGGGTTGTT+TGG | 0.306761 | tig0028916:+34343 | None:intergenic |
| CAACAGTTCTTCTATATCAT+TGG | 0.307501 | tig0028916:-30828 | Msa1439970:CDS |
| GCTATGGACTTCAAACTTCT+TGG | 0.308454 | tig0028916:-33144 | Msa1439970:CDS |
| ATGGAACCCCTTTGCTTTCA+TGG | 0.311933 | tig0028916:-32058 | Msa1439970:CDS |
| CTTCATGAAAAGGTTTGAAT+TGG | 0.312775 | tig0028916:-32645 | Msa1439970:intron |
| GAACCAGCATAGAAAACTTC+TGG | 0.314399 | tig0028916:+29809 | None:intergenic |
| GTTCGCCAACCCCATCCTTT+AGG | 0.316184 | tig0028916:+29001 | None:intergenic |
| TGCGAACATGTTCAAATTGA+AGG | 0.319930 | tig0028916:-34208 | Msa1439970:CDS |
| CTTGCTGATCTTCTACAAAA+TGG | 0.320260 | tig0028916:-28959 | Msa1439970:CDS |
| AATCTCCAAGCTCAACTAAA+AGG | 0.323259 | tig0028916:+32417 | None:intergenic |
| GCGTGTTAGAACTGCTTGTT+GGG | 0.332796 | tig0028916:-32975 | Msa1439970:CDS |
| TTCCATATACCTGTAATATC+TGG | 0.336019 | tig0028916:-28269 | Msa1439970:three_prime_UTR |
| ACCAAGGGTGCGCCGTCCCT+GGG | 0.347154 | tig0028916:+29655 | None:intergenic |
| GGTGCTATTGATGGGCTTGC+AGG | 0.348289 | tig0028916:-31199 | Msa1439970:CDS |
| TTCATCTCTATAGTTTCCTC+TGG | 0.349358 | tig0028916:+31998 | None:intergenic |
| TTTGCGGAGAACCAAGATTA+TGG | 0.353090 | tig0028916:-33010 | Msa1439970:CDS |
| GGAATTCCTGGTTCTGAGTC+TGG | 0.355047 | tig0028916:-32566 | Msa1439970:CDS |
| CATCCTGCACATGGAATTCC+TGG | 0.358555 | tig0028916:-32578 | Msa1439970:CDS |
| AACACAAAGGGAACAAGAAA+TGG | 0.359332 | tig0028916:-30948 | Msa1439970:CDS |
| ATTGGCTTTCCACACATTCC+TGG | 0.360070 | tig0028916:-32627 | Msa1439970:CDS |
| GCAGCTTGTTTGAATTAAAC+AGG | 0.361628 | tig0028916:-28912 | Msa1439970:intron |
| GGAAGCGCTGCGTTGGTGAT+AGG | 0.361656 | tig0028916:+34321 | None:intergenic |
| AAAGGTGACTGCACGGTATC+AGG | 0.365867 | tig0028916:-29195 | Msa1439970:intron |
| ATCCAGATATTACAGGTATA+TGG | 0.367118 | tig0028916:+28267 | None:intergenic |
| GTTGAGGTGCCTCTTGGTGC+TGG | 0.374916 | tig0028916:-32230 | Msa1439970:CDS |
| CATTGCATTAACAACTATAT+CGG | 0.379133 | tig0028916:+34165 | None:intergenic |
| TCCATCGTATCCTTGTGATA+TGG | 0.379836 | tig0028916:-32312 | Msa1439970:CDS |
| ATTGATGGGCTTGCAGGTAT+TGG | 0.382051 | tig0028916:-31193 | Msa1439970:CDS |
| TCCAGTGAATGGGGAAGATA+TGG | 0.382120 | tig0028916:-32077 | Msa1439970:CDS |
| TGGATTCAAGTTTGGTGAAA+TGG | 0.384240 | tig0028916:+32331 | None:intergenic |
| TGATATGGAAGGACCTTCAT+TGG | 0.385172 | tig0028916:-32297 | Msa1439970:CDS |
| TGATTCAGGAACATGCTTCA+TGG | 0.385881 | tig0028916:-33517 | Msa1439970:intron |
| AACCAAGATTATGGCATTCA+TGG | 0.388083 | tig0028916:-33001 | Msa1439970:CDS |
| TGGAACCCCTTTGCTTTCAT+GGG | 0.402678 | tig0028916:-32057 | Msa1439970:CDS |
| TACACACGGCCAGTTTGCTT+TGG | 0.403080 | tig0028916:-28298 | Msa1439970:three_prime_UTR |
| CTTTCATGGGGTGGCCATAT+AGG | 0.405787 | tig0028916:-32044 | Msa1439970:CDS |
| GGATACGATGGATTCAAGTT+TGG | 0.407077 | tig0028916:+32323 | None:intergenic |
| CACTTACCGCTTCTCTTCAC+AGG | 0.408715 | tig0028916:+32740 | None:intergenic |
| AGCAAGTTGAACCCGTTGAT+TGG | 0.412078 | tig0028916:+32361 | None:intergenic |
| CTTGGTGCTGGAACAACTAC+TGG | 0.416579 | tig0028916:-32218 | Msa1439970:CDS |
| ACCCCTTTGCTTTCATGGGG+TGG | 0.419158 | tig0028916:-32053 | Msa1439970:CDS |
| CCCCAGGGACGGCGCACCCT+TGG | 0.419963 | tig0028916:-29656 | Msa1439970:intron |
| TGTGTACATCCAGATATTAC+AGG | 0.420837 | tig0028916:+28260 | None:intergenic |
| CATGTTAGAGGTGCTATTGA+TGG | 0.422366 | tig0028916:-31208 | Msa1439970:CDS |
| CATGATGTTCTCACCCCGTC+TGG | 0.423356 | tig0028916:+32257 | None:intergenic |
| AGAAAGCAGCTTGAAGAGAT+AGG | 0.429338 | tig0028916:-31897 | Msa1439970:CDS |
| TGGTGATAGGGTGAAGGAGG+AGG | 0.433042 | tig0028916:+34334 | None:intergenic |
| GAACACCAACATTTCCCTCT+TGG | 0.435857 | tig0028916:+29063 | None:intergenic |
| AAGCTGTAAATGATGGTCTA+TGG | 0.436191 | tig0028916:-31863 | Msa1439970:CDS |
| AACATACCATTGGTATAGAA+TGG | 0.436452 | tig0028916:-30859 | Msa1439970:CDS |
| CATTTCTGATTCCAATCAAC+GGG | 0.437158 | tig0028916:-32372 | Msa1439970:CDS |
| TGGGCTCACTTCCAGTGAAT+GGG | 0.438222 | tig0028916:-32087 | Msa1439970:CDS |
| GTGGGCTCACTTCCAGTGAA+TGG | 0.440603 | tig0028916:-32088 | Msa1439970:CDS |
| GGTGGTTGGATCATTGTTAT+CGG | 0.441545 | tig0028916:+34270 | None:intergenic |
| GATATAGTTGTTAATGCAAT+GGG | 0.442170 | tig0028916:-34163 | Msa1439970:CDS |
| GACTGTTTACTAGGTGTTTG+CGG | 0.444119 | tig0028916:-33026 | Msa1439970:intron |
| ACCTATTGTTGTTATCTGAA+TGG | 0.444189 | tig0028916:+32156 | None:intergenic |
| TTCGGAAGCTTTAAACAAAC+GGG | 0.444816 | tig0028916:-29043 | Msa1439970:CDS |
| CAAGATGTTGGAAACTGACT+TGG | 0.448497 | tig0028916:-32486 | Msa1439970:CDS |
| TTTCTGTTGCCAACGCCAAA+TGG | 0.451275 | tig0028916:+31106 | None:intergenic |
| CGATATAGTTGTTAATGCAA+TGG | 0.451581 | tig0028916:-34164 | Msa1439970:CDS |
| CCTGGTTCTGAGTCTGGAAC+TGG | 0.451697 | tig0028916:-32560 | Msa1439970:CDS |
| TCTTCTACAGGTGAAAGAAA+TGG | 0.451971 | tig0028916:-31253 | Msa1439970:CDS |
| CCCCATGAATGCCATAATCT+TGG | 0.453093 | tig0028916:+32999 | None:intergenic |
| AGCGTGTTAGAACTGCTTGT+TGG | 0.455113 | tig0028916:-32976 | Msa1439970:CDS |
| CTATGCTGGTTCTTTGTGGA+AGG | 0.455390 | tig0028916:-29798 | Msa1439970:intron |
| AATGTATGAGATGAAAGTTT+AGG | 0.458406 | tig0028916:+32798 | None:intergenic |
| CCTTGCAAAGCTGTAAATGA+TGG | 0.459493 | tig0028916:-31870 | Msa1439970:CDS |
| TAGGAGATGAACGATGGTTA+AGG | 0.459717 | tig0028916:-28447 | Msa1439970:three_prime_UTR |
| GAAGGGGCGCCAAAGCAAAC+TGG | 0.460887 | tig0028916:+28289 | None:intergenic |
| GTTCGGAAGCTTTAAACAAA+CGG | 0.461060 | tig0028916:-29044 | Msa1439970:CDS |
| TGGTGAGATGATGGCTGCTT+GGG | 0.462275 | tig0028916:+34295 | None:intergenic |
| GTATTTCTTAATATATTTGA+AGG | 0.462512 | tig0028916:-31969 | Msa1439970:CDS |
| ATGGGATTGCAAAGTACTGC+TGG | 0.466131 | tig0028916:-30929 | Msa1439970:CDS |
| ACCATTCAGATAACAACAAT+AGG | 0.466623 | tig0028916:-32157 | Msa1439970:CDS |
| ATGGATTGACAGCTTTAGTC+GGG | 0.469334 | tig0028916:-31015 | Msa1439970:CDS |
| TGACTTACCCAAAGCGAAAA+GGG | 0.470869 | tig0028916:+30777 | None:intergenic |
| TCCATATCTTCCCCATTCAC+TGG | 0.470957 | tig0028916:+32076 | None:intergenic |
| GATCACAATGGAGACCTGTC+TGG | 0.471883 | tig0028916:-31040 | Msa1439970:CDS |
| TCTATACCAATGGTATGTTC+TGG | 0.473773 | tig0028916:+30863 | None:intergenic |
| GAGGGTTGTTTGGATATTGA+GGG | 0.475120 | tig0028916:+34353 | None:intergenic |
| GGAGGGTTGTTTGGATATTG+AGG | 0.475128 | tig0028916:+34352 | None:intergenic |
| CATAATCATAACAATATACC+TGG | 0.475480 | tig0028916:-31304 | Msa1439970:CDS |
| TTTCATCGAGTTCTTGTAGT+GGG | 0.476647 | tig0028916:-32106 | Msa1439970:CDS |
| ACCAACATTTCCCTCTTGGA+TGG | 0.478200 | tig0028916:+29067 | None:intergenic |
| ACTACTGGAGTGGGTATTGA+AGG | 0.478672 | tig0028916:-32203 | Msa1439970:CDS |
| TACATTCGCACCACTTTCCA+CGG | 0.480244 | tig0028916:+34472 | None:intergenic |
| TCTCGTGTGCCATTTGGCGT+TGG | 0.481287 | tig0028916:-31115 | Msa1439970:CDS |
| GGCCACCCCATGAAAGCAAA+GGG | 0.481323 | tig0028916:+32051 | None:intergenic |
| GCACAGGCTTGGTGATGGCC+AGG | 0.485817 | tig0028916:-29843 | Msa1439970:CDS |
| CAGGGTCACAATAGCAGCAC+TGG | 0.488664 | tig0028916:+33480 | None:intergenic |
| TCTGATAACACCAAGGGAAA+AGG | 0.488742 | tig0028916:-32530 | Msa1439970:CDS |
| GAGTCTTAAAAGTGATCTAA+AGG | 0.489618 | tig0028916:-32456 | Msa1439970:CDS |
| GGGTATCCACAGATCATTAG+AGG | 0.490981 | tig0028916:+32761 | None:intergenic |
| CACTACAGCAATAACTCTTA+GGG | 0.492494 | tig0028916:+28934 | None:intergenic |
| CGAGGCTATTGCAATTGCCT+TGG | 0.492878 | tig0028916:-33431 | Msa1439970:CDS |
| TGAAATATGAACTGCGGGAG+AGG | 0.493342 | tig0028916:+34113 | None:intergenic |
| CTGACTTACCCAAAGCGAAA+AGG | 0.493778 | tig0028916:+30776 | None:intergenic |
| ACACAAAGGGAACAAGAAAT+GGG | 0.495586 | tig0028916:-30947 | Msa1439970:CDS |
| AAGAGGGAAATGTTGGTGTT+CGG | 0.499834 | tig0028916:-29061 | Msa1439970:CDS |
| GACAATGAATTACCCAATGA+AGG | 0.502773 | tig0028916:+32284 | None:intergenic |
| TGGCCATATAGGCAGAAAAC+AGG | 0.504963 | tig0028916:-32033 | Msa1439970:CDS |
| GAACCAGGAATTCCATGTGC+AGG | 0.505773 | tig0028916:+32575 | None:intergenic |
| GTTGTTATCTGAATGGTAGC+AGG | 0.506164 | tig0028916:+32163 | None:intergenic |
| TGTTATGTTGAGGTGCCTCT+TGG | 0.506254 | tig0028916:-32236 | Msa1439970:CDS |
| CTTCTACCTAAAGCTCCTAA+AGG | 0.507698 | tig0028916:-29016 | Msa1439970:CDS |
| TTTGAGGAAGTGCACAGGCT+TGG | 0.507777 | tig0028916:-29854 | Msa1439970:CDS |
| GGAACATGCTTCATGGTCCC+TGG | 0.508066 | tig0028916:-33510 | Msa1439970:CDS |
| ATGTTCTTGTATGTAAGATC+CGG | 0.508845 | tig0028916:+31324 | None:intergenic |
| TTGTTCCATAATTCCCTCCC+TGG | 0.509226 | tig0028916:+30987 | None:intergenic |
| ACCTAAAGCTCCTAAAGGAT+GGG | 0.509271 | tig0028916:-29011 | Msa1439970:CDS |
| CTATGACCTGCGTCGATGCA+TGG | 0.509566 | tig0028916:-28186 | Msa1439970:three_prime_UTR |
| TGGTGTCTCTAACAATTGTA+CGG | 0.509645 | tig0028916:+30883 | None:intergenic |
| GGTGATAGGGTGAAGGAGGA+GGG | 0.510194 | tig0028916:+34335 | None:intergenic |
| TATGTTGCTGAATCTTCTAC+AGG | 0.511758 | tig0028916:-31265 | Msa1439970:CDS |
| CCAGTTCCAGACTCAGAACC+AGG | 0.512258 | tig0028916:+32560 | None:intergenic |
| TATTTCTTAATATATTTGAA+GGG | 0.512575 | tig0028916:-31968 | Msa1439970:CDS |
| AGATGATGGCTGCTTGGGAA+TGG | 0.512683 | tig0028916:+34300 | None:intergenic |
| CCTGTACGGGTACATGTTAG+AGG | 0.513408 | tig0028916:-31220 | Msa1439970:CDS |
| ACGTGCTTCTGAATCATCAT+TGG | 0.515180 | tig0028916:+31066 | None:intergenic |
| GTAGGAGGTGAAGCCGCTGC+AGG | 0.516779 | tig0028916:+31151 | None:intergenic |
| ACATACCATTGGTATAGAAT+GGG | 0.517714 | tig0028916:-30858 | Msa1439970:CDS |
| CTGTCAATCCATCTCCAGAC+AGG | 0.521042 | tig0028916:+31026 | None:intergenic |
| GATATGGAAGGACCTTCATT+GGG | 0.523399 | tig0028916:-32296 | Msa1439970:CDS |
| ACCAAGATTATGGCATTCAT+GGG | 0.523479 | tig0028916:-33000 | Msa1439970:CDS |
| TACCTAAAGCTCCTAAAGGA+TGG | 0.524520 | tig0028916:-29012 | Msa1439970:CDS |
| TCATCTCTATAGTTTCCTCT+GGG | 0.527103 | tig0028916:+31999 | None:intergenic |
| CCCATCCAAGAGGGAAATGT+TGG | 0.527624 | tig0028916:-29068 | Msa1439970:CDS |
| ACGAGACTTGCCGTGGAAAG+TGG | 0.528269 | tig0028916:-34482 | Msa1439970:five_prime_UTR |
| GGCTGCCTTTGATGATATGA+TGG | 0.529563 | tig0028916:-34380 | Msa1439970:exon |
| ATGTTAGAGGTGCTATTGAT+GGG | 0.529897 | tig0028916:-31207 | Msa1439970:CDS |
| AATGGAGACCTGTCTGGAGA+TGG | 0.530070 | tig0028916:-31034 | Msa1439970:CDS |
| TTCAGATGCTTCTTAGTCAG+AGG | 0.530461 | tig0028916:-31444 | Msa1439970:intron |
| GTTGAGCTTGGAGATTCAGA+AGG | 0.532108 | tig0028916:-32410 | Msa1439970:CDS |
| CCAAGCTCAACTAAAAGGTT+AGG | 0.533794 | tig0028916:+32422 | None:intergenic |
| ATTTCATTATATCTGAGCTA+TGG | 0.534101 | tig0028916:-33160 | Msa1439970:CDS |
| ATGGTGAGATGATGGCTGCT+TGG | 0.535393 | tig0028916:+34294 | None:intergenic |
| GATGGATTGACAGCTTTAGT+CGG | 0.536660 | tig0028916:-31016 | Msa1439970:CDS |
| TCAGATGCTTCTTAGTCAGA+GGG | 0.537873 | tig0028916:-31443 | Msa1439970:intron |
| GCACGTAATTCAGCGGTGGT+TGG | 0.538329 | tig0028916:+34256 | None:intergenic |
| CCAAGGGTGCGCCGTCCCTG+GGG | 0.538403 | tig0028916:+29656 | None:intergenic |
| GAAGCGCTGCGTTGGTGATA+GGG | 0.547226 | tig0028916:+34322 | None:intergenic |
| GCAGCACTGGCTTCTTTCCA+GGG | 0.547988 | tig0028916:+33493 | None:intergenic |
| TGGGAATGGAAGCGCTGCGT+TGG | 0.548811 | tig0028916:+34314 | None:intergenic |
| ATTCATTGTCTGATCCAGAC+GGG | 0.548969 | tig0028916:-32271 | Msa1439970:CDS |
| CCATCATTTACAGCTTTGCA+AGG | 0.550593 | tig0028916:+31870 | None:intergenic |
| AAGATGTTGGAAACTGACTT+GGG | 0.551013 | tig0028916:-32485 | Msa1439970:CDS |
| TGGGATTGCAAAGTACTGCT+GGG | 0.552611 | tig0028916:-30928 | Msa1439970:CDS |
| CCAACATTTCCCTCTTGGAT+GGG | 0.553722 | tig0028916:+29068 | None:intergenic |
| AAATGATGGTCTATGGCTGC+AGG | 0.554515 | tig0028916:-31856 | Msa1439970:intron |
| ATTGTTATCATCGATTTGCA+GGG | 0.554872 | tig0028916:+33462 | None:intergenic |
| GGAACCCCTTTGCTTTCATG+GGG | 0.556059 | tig0028916:-32056 | Msa1439970:CDS |
| ACATACAGAGCTAACACAAA+GGG | 0.557241 | tig0028916:-30960 | Msa1439970:CDS |
| CTGAAGGTCGAGAAAGGAAG+CGG | 0.561497 | tig0028916:+33348 | None:intergenic |
| GTATGTTGACTCGCGTGAAA+AGG | 0.562047 | tig0028916:-29213 | Msa1439970:CDS |
| TGGCTGCACTAACAAGATGT+TGG | 0.562461 | tig0028916:-32498 | Msa1439970:CDS |
| ATTGAAGGGCCTTCTGAGGA+AGG | 0.562708 | tig0028916:-32188 | Msa1439970:CDS |
| CCTCTGTCAAAGTGGCGGCA+TGG | 0.563399 | tig0028916:-32948 | Msa1439970:CDS |
| ATTCTTATACTGTACAATGT+AGG | 0.564821 | tig0028916:+28424 | None:intergenic |
| ACATACCTGAAGGTCGAGAA+AGG | 0.565685 | tig0028916:+33342 | None:intergenic |
| CCTCTAACATGTACCCGTAC+AGG | 0.568599 | tig0028916:+31220 | None:intergenic |
| ATATTACAGGTATATGGAAG+GGG | 0.568911 | tig0028916:+28273 | None:intergenic |
| CAGGATTGTTTCTTCACCGT+CGG | 0.568921 | tig0028916:-29545 | Msa1439970:CDS |
| GAGACGATGAAGGTGATAAG+TGG | 0.569640 | tig0028916:+34138 | None:intergenic |
| CGAGAAAGGAAGCGGCAGCA+AGG | 0.571828 | tig0028916:+33356 | None:intergenic |
| CAGAGATAACTGATGTGCAC+AGG | 0.572463 | tig0028916:-29518 | Msa1439970:CDS |
| ATTCTCCCATTCTATACCAA+TGG | 0.575296 | tig0028916:+30853 | None:intergenic |
| TAACCTGAAATATGAACTGC+GGG | 0.576242 | tig0028916:+34108 | None:intergenic |
| GGTGTCTCTAACAATTGTAC+GGG | 0.576585 | tig0028916:+30884 | None:intergenic |
| GATATTACAGGTATATGGAA+GGG | 0.577513 | tig0028916:+28272 | None:intergenic |
| ACATTTCTGATTCCAATCAA+CGG | 0.579154 | tig0028916:-32373 | Msa1439970:CDS |
| GGGAGAGGATGAGACGATGA+AGG | 0.579393 | tig0028916:+34128 | None:intergenic |
| TTCAGATAACAACAATAGGT+TGG | 0.581192 | tig0028916:-32153 | Msa1439970:CDS |
| AACTACATTTGTTCCTGCAG+CGG | 0.583833 | tig0028916:-31164 | Msa1439970:CDS |
| GTTCTCCATCATATCATCAA+AGG | 0.584373 | tig0028916:+34375 | None:intergenic |
| TCATCATTGGCTGCAGACTG+AGG | 0.584853 | tig0028916:+31079 | None:intergenic |
| TAGCAGGATCCTTCCTCAGA+AGG | 0.587745 | tig0028916:+32179 | None:intergenic |
| CTTCTGGAGAATGCTTGACC+TGG | 0.589008 | tig0028916:+29825 | None:intergenic |
| ATTTCTTAATATATTTGAAG+GGG | 0.591640 | tig0028916:-31967 | Msa1439970:CDS |
| TTTATTCCATGCATCGACGC+AGG | 0.592657 | tig0028916:+28180 | None:intergenic |
| AGATATTACAGGTATATGGA+AGG | 0.594726 | tig0028916:+28271 | None:intergenic |
| CATCATTGGCTGCAGACTGA+GGG | 0.595380 | tig0028916:+31080 | None:intergenic |
| TACTGACCTCTAATGATCTG+TGG | 0.595873 | tig0028916:-32767 | Msa1439970:CDS |
| TTGGATCATTGTTATCGGAA+TGG | 0.599637 | tig0028916:+34275 | None:intergenic |
| AATTTGAACATGTTCGCAGA+GGG | 0.601296 | tig0028916:+34213 | None:intergenic |
| TGGCCACCCCATGAAAGCAA+AGG | 0.602137 | tig0028916:+32050 | None:intergenic |
| ATTGTTTCTTCACCGTCGGA+AGG | 0.603193 | tig0028916:-29541 | Msa1439970:CDS |
| GGGCTTGCAGGTATTGGCCG+TGG | 0.604369 | tig0028916:-31187 | Msa1439970:CDS |
| CCTAAAGCTCCTAAAGGATG+GGG | 0.605954 | tig0028916:-29010 | Msa1439970:CDS |
| TTCTTGTATGTAAGATCCGG+TGG | 0.606895 | tig0028916:+31327 | None:intergenic |
| AAGGGAAAAGGTATAGCTGA+TGG | 0.608328 | tig0028916:-32518 | Msa1439970:CDS |
| TTTCTTAATATATTTGAAGG+GGG | 0.609043 | tig0028916:-31966 | Msa1439970:CDS |
| GCACGCAGTGAATGAATGAA+TGG | 0.609365 | tig0028916:-34516 | None:intergenic |
| TCCATATCACAAGGATACGA+TGG | 0.609813 | tig0028916:+32311 | None:intergenic |
| TTATCGGAATGGTGAGATGA+TGG | 0.610701 | tig0028916:+34286 | None:intergenic |
| CAATTTGAACATGTTCGCAG+AGG | 0.611329 | tig0028916:+34212 | None:intergenic |
| TCGTATCCTTGTGATATGGA+AGG | 0.611508 | tig0028916:-32308 | Msa1439970:CDS |
| CTGCGTTGGTGATAGGGTGA+AGG | 0.611633 | tig0028916:+34328 | None:intergenic |
| TAGTCGGGCTTAGCCAGGGA+GGG | 0.611766 | tig0028916:-31000 | Msa1439970:CDS |
| CCATGCCGCCACTTTGACAG+AGG | 0.611997 | tig0028916:+32948 | None:intergenic |
| GAAAAGACAAATCGTGTAGG+AGG | 0.612265 | tig0028916:+31136 | None:intergenic |
| AAGCTCCTAAAGGATGGGGT+TGG | 0.613769 | tig0028916:-29006 | Msa1439970:CDS |
| GAGACACCAGAACATACCAT+TGG | 0.615183 | tig0028916:-30869 | Msa1439970:CDS |
| CGTTGGTGATAGGGTGAAGG+AGG | 0.615421 | tig0028916:+34331 | None:intergenic |
| ACTTACCCAAAGCGAAAAGG+GGG | 0.617208 | tig0028916:+30779 | None:intergenic |
| GGGTATTGAAGGGCCTTCTG+AGG | 0.620419 | tig0028916:-32192 | Msa1439970:CDS |
| GGGCTCACTTCCAGTGAATG+GGG | 0.620580 | tig0028916:-32086 | Msa1439970:CDS |
| CAGTTATCTCTGCCTTCCGA+CGG | 0.621554 | tig0028916:+29529 | None:intergenic |
| AATTCATTGTCTGATCCAGA+CGG | 0.623772 | tig0028916:-32272 | Msa1439970:CDS |
| CGCGTGAAAAGGTGACTGCA+CGG | 0.624156 | tig0028916:-29202 | Msa1439970:CDS |
| CAATTATACGAGACTTGCCG+TGG | 0.624281 | tig0028916:-34489 | Msa1439970:five_prime_UTR |
| CAGGAACAAATGTAGTTCCA+CGG | 0.627613 | tig0028916:+31170 | None:intergenic |
| TATTATCATTAAGTTTAGGG+TGG | 0.630240 | tig0028916:+33392 | None:intergenic |
| GGGATTGCAAAGTACTGCTG+GGG | 0.630860 | tig0028916:-30927 | Msa1439970:CDS |
| ATAATCATAACAATATACCT+GGG | 0.635196 | tig0028916:-31303 | Msa1439970:CDS |
| CTACTGGAGTGGGTATTGAA+GGG | 0.635325 | tig0028916:-32202 | Msa1439970:CDS |
| TAATCATAACAATATACCTG+GGG | 0.636900 | tig0028916:-31302 | Msa1439970:CDS |
| AAGATTGAACATCCTGCACA+TGG | 0.639055 | tig0028916:-32587 | Msa1439970:CDS |
| TGCTGGAACAACTACTGGAG+TGG | 0.639082 | tig0028916:-32213 | Msa1439970:CDS |
| GTTGACTTGCCCATCCAAGA+GGG | 0.642821 | tig0028916:-29077 | Msa1439970:CDS |
| GACTTACCCAAAGCGAAAAG+GGG | 0.644219 | tig0028916:+30778 | None:intergenic |
| GATAACTGATGTGCACAGGA+AGG | 0.644413 | tig0028916:-29514 | Msa1439970:intron |
| CATGTTCGCAGAGGGAAGCG+AGG | 0.645597 | tig0028916:+34221 | None:intergenic |
| GCTGGAACAACTACTGGAGT+GGG | 0.645613 | tig0028916:-32212 | Msa1439970:CDS |
| TGGCGGCATGGAGTTGAGAG+AGG | 0.646346 | tig0028916:-32936 | Msa1439970:intron |
| CGAGAAAAGACAAATCGTGT+AGG | 0.648943 | tig0028916:+31133 | None:intergenic |
| AGTTGACTTGCCCATCCAAG+AGG | 0.651148 | tig0028916:-29078 | Msa1439970:CDS |
| ACTTACCGCTTCTCTTCACA+GGG | 0.651417 | tig0028916:+32741 | None:intergenic |
| GAAGTGCACAGGCTTGGTGA+TGG | 0.655070 | tig0028916:-29848 | Msa1439970:CDS |
| TGATCAGTATATTGTACACA+CGG | 0.658854 | tig0028916:-28312 | Msa1439970:three_prime_UTR |
| GGATACCCTGTGAAGAGAAG+CGG | 0.660763 | tig0028916:-32746 | Msa1439970:intron |
| GGCTACCTCTGTCAAAGTGG+CGG | 0.660938 | tig0028916:-32953 | Msa1439970:CDS |
| GTTCCCATAAAGATATGCCA+AGG | 0.664821 | tig0028916:+33414 | None:intergenic |
| CTCTTGTAGGAGATGAACGA+TGG | 0.665004 | tig0028916:-28453 | Msa1439970:intron |
| ATTCATTCTGATAACACCAA+GGG | 0.665141 | tig0028916:-32536 | Msa1439970:CDS |
| CATTCATTCTGATAACACCA+AGG | 0.669271 | tig0028916:-32537 | Msa1439970:CDS |
| GAAGCACGTGCTGATCACAA+TGG | 0.669347 | tig0028916:-31052 | Msa1439970:CDS |
| TTAGTCGGGCTTAGCCAGGG+AGG | 0.669348 | tig0028916:-31001 | Msa1439970:CDS |
| TGGGGCTACCTCTGTCAAAG+TGG | 0.670960 | tig0028916:-32956 | Msa1439970:CDS |
| CGTGTTAGAACTGCTTGTTG+GGG | 0.673137 | tig0028916:-32974 | Msa1439970:CDS |
| TACATACAGAGCTAACACAA+AGG | 0.673898 | tig0028916:-30961 | Msa1439970:CDS |
| TTCATTGTCTGATCCAGACG+GGG | 0.678647 | tig0028916:-32270 | Msa1439970:CDS |
| GAAGGTCCTTCCATATCACA+AGG | 0.679216 | tig0028916:+32302 | None:intergenic |
| GAGAACATCATGTTATGTTG+AGG | 0.681319 | tig0028916:-32246 | Msa1439970:CDS |
| GAGAGCACGTAATTCAGCGG+TGG | 0.682747 | tig0028916:+34252 | None:intergenic |
| ATCGAGAGCACGTAATTCAG+CGG | 0.684133 | tig0028916:+34249 | None:intergenic |
| TGATAACAATGTTAATGACG+AGG | 0.687261 | tig0028916:-33449 | Msa1439970:CDS |
| GTAGTTGTTCCAGCACCAAG+AGG | 0.688597 | tig0028916:+32221 | None:intergenic |
| AGATGTTGGAAACTGACTTG+GGG | 0.689189 | tig0028916:-32484 | Msa1439970:CDS |
| CTTACCCAAAGCGAAAAGGG+GGG | 0.699863 | tig0028916:+30780 | None:intergenic |
| CCAAGATTATGGCATTCATG+GGG | 0.706870 | tig0028916:-32999 | Msa1439970:CDS |
| CAGGTCAAAGCTCATCCCAG+AGG | 0.707800 | tig0028916:-32014 | Msa1439970:CDS |
| GGATTGCAAAGTACTGCTGG+GGG | 0.721700 | tig0028916:-30926 | Msa1439970:CDS |
| AATCATAACAATATACCTGG+GGG | 0.723850 | tig0028916:-31301 | Msa1439970:CDS |
| ATAACCTGAAATATGAACTG+CGG | 0.723985 | tig0028916:+34107 | None:intergenic |
| GCCACCCCATGAAAGCAAAG+GGG | 0.742348 | tig0028916:+32052 | None:intergenic |
| ATGCAATTCGAACAACACTG+AGG | 0.775752 | tig0028916:-34401 | Msa1439970:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTTGTATAATTTAGAT+AGG | - | tig0028916:29033-29052 | Msa1439970:CDS | 10.0% |
| !!! | AGATTTATAATGTTTTTATT+TGG | - | tig0028916:29447-29466 | Msa1439970:intron | 10.0% |
| !! | TATTTCTTAATATATTTGAA+GGG | - | tig0028916:30705-30724 | Msa1439970:intron | 10.0% |
| !! | TAATAATTGATAAAGTAATA+TGG | - | tig0028916:31935-31954 | Msa1439970:CDS | 10.0% |
| !! | TTTCATATATTTCAATTATT+TGG | - | tig0028916:33196-33215 | Msa1439970:intron | 10.0% |
| !! | TTCATATATTTCAATTATTT+GGG | - | tig0028916:33197-33216 | Msa1439970:intron | 10.0% |
| !! | AAAATGATTTATGTTTAGAT+AGG | - | tig0028916:28822-28841 | Msa1439970:intron | 15.0% |
| !! | AAATAAAAACTACAAATTCT+AGG | - | tig0028916:28894-28913 | Msa1439970:intron | 15.0% |
| !! | CATTATTATCATTAAGTTTA+GGG | + | tig0028916:29287-29306 | None:intergenic | 15.0% |
| !! | GTATTTCTTAATATATTTGA+AGG | - | tig0028916:30704-30723 | Msa1439970:intron | 15.0% |
| !! | ATTTCTTAATATATTTGAAG+GGG | - | tig0028916:30706-30725 | Msa1439970:intron | 15.0% |
| !!! | TTTTTCTTTAAGATTCTAAA+TGG | + | tig0028916:30880-30899 | None:intergenic | 15.0% |
| !! | TATAAAAGGGATAAAAAAAA+AGG | + | tig0028916:33314-33333 | None:intergenic | 15.0% |
| !! | CATGTAATAAATCTATAAAA+GGG | + | tig0028916:33327-33346 | None:intergenic | 15.0% |
| !!! | TATTGATTGTATTTTATGTA+CGG | - | tig0028916:33859-33878 | Msa1439970:intron | 15.0% |
| !! | ACATCATGAAGTAAAATATA+CGG | + | tig0028916:28706-28725 | None:intergenic | 20.0% |
| !!! | AACTAACTTTGAAGTAAATT+CGG | + | tig0028916:28796-28815 | None:intergenic | 20.0% |
| !!! | TTAAATACAAGTTTGTTATC+TGG | - | tig0028916:29127-29146 | Msa1439970:intron | 20.0% |
| !! | GCATTATTATCATTAAGTTT+AGG | + | tig0028916:29288-29307 | None:intergenic | 20.0% |
| !! | TATCAAGCAAAAAGATTAAA+CGG | + | tig0028916:29424-29443 | None:intergenic | 20.0% |
| !! | AGTAGTTAAATTTCACAAAT+GGG | + | tig0028916:29590-29609 | None:intergenic | 20.0% |
| !! | TAGTAGTTAAATTTCACAAA+TGG | + | tig0028916:29591-29610 | None:intergenic | 20.0% |
| !! | TACAAAGATTATGTTTGATT+TGG | - | tig0028916:29827-29846 | Msa1439970:CDS | 20.0% |
| !! | TTTCTTAATATATTTGAAGG+GGG | - | tig0028916:30707-30726 | Msa1439970:intron | 20.0% |
| !!! | TTAGTTTTTAAGCCTTTTAA+GGG | + | tig0028916:30938-30957 | None:intergenic | 20.0% |
| !!! | ATTAGTTTTTAAGCCTTTTA+AGG | + | tig0028916:30939-30958 | None:intergenic | 20.0% |
| !! | GTATCTATTCTTGAAAATAT+TGG | - | tig0028916:31060-31079 | Msa1439970:CDS | 20.0% |
| !! | GTATAGAAATTACTATTCAT+TGG | - | tig0028916:31141-31160 | Msa1439970:CDS | 20.0% |
| !! | ATTCATTGGACTAAAATTAT+TGG | - | tig0028916:31155-31174 | Msa1439970:CDS | 20.0% |
| !! | ATAATCATAACAATATACCT+GGG | - | tig0028916:31370-31389 | Msa1439970:CDS | 20.0% |
| !! | AATTATTAATAGTTGCAAAG+TGG | + | tig0028916:31923-31942 | None:intergenic | 20.0% |
| !! | AAAAAAGAAACACAGTTAAA+GGG | + | tig0028916:32230-32249 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAACACAGTTAA+AGG | + | tig0028916:32231-32250 | None:intergenic | 20.0% |
| !! | CACAGAAAATATAGTTTAAA+AGG | + | tig0028916:32364-32383 | None:intergenic | 20.0% |
| !! | AAAAAATTGACATATTGTCT+TGG | - | tig0028916:32598-32617 | Msa1439970:CDS | 20.0% |
| !! | ATGTAATAAAACATTACCAA+GGG | + | tig0028916:33036-33055 | None:intergenic | 20.0% |
| !! | TACATCAAAATTATCATCTT+CGG | - | tig0028916:33051-33070 | Msa1439970:intron | 20.0% |
| !! | ATAAATACAATAACCAACTT+AGG | + | tig0028916:33223-33242 | None:intergenic | 20.0% |
| !! | TAGTACTAGTAAAATAGTAA+CGG | - | tig0028916:33268-33287 | Msa1439970:intron | 20.0% |
| !! | CCATGTAATAAATCTATAAA+AGG | + | tig0028916:33328-33347 | None:intergenic | 20.0% |
| !!! | CCTTTTATAGATTTATTACA+TGG | - | tig0028916:33325-33344 | Msa1439970:intron | 20.0% |
| !!! | TATCTTTGAAATTTGTTATC+AGG | - | tig0028916:33430-33449 | Msa1439970:CDS | 20.0% |
| !!! | TCGTTTTCATTATTGATTTT+GGG | - | tig0028916:33551-33570 | Msa1439970:intron | 20.0% |
| ! | CATTGCATTAACAACTATAT+CGG | + | tig0028916:28511-28530 | None:intergenic | 25.0% |
| ! | GATATAGTTGTTAATGCAAT+GGG | - | tig0028916:28510-28529 | Msa1439970:intron | 25.0% |
| !!! | ATTTCAATAATTTTGACACG+AGG | + | tig0028916:28631-28650 | None:intergenic | 25.0% |
| !! | TATACGGATTACATTATTCA+GGG | + | tig0028916:28690-28709 | None:intergenic | 25.0% |
| !! | ATATACGGATTACATTATTC+AGG | + | tig0028916:28691-28710 | None:intergenic | 25.0% |
| !! | ACAAAATCAACTTTTGTCAT+CGG | + | tig0028916:28769-28788 | None:intergenic | 25.0% |
| ! | ATAATTTAGATAGGAAAACG+AGG | - | tig0028916:29042-29061 | Msa1439970:CDS | 25.0% |
| ! | TATTATCATTAAGTTTAGGG+TGG | + | tig0028916:29284-29303 | None:intergenic | 25.0% |
| !!! | TATGTTGTTGTTTACATTGA+TGG | - | tig0028916:29349-29368 | Msa1439970:intron | 25.0% |
| ! | TATTCAAATCATAACCGTAA+AGG | - | tig0028916:29384-29403 | Msa1439970:intron | 25.0% |
| ! | TATTAATGATCATGCCTTTA+CGG | + | tig0028916:29401-29420 | None:intergenic | 25.0% |
| ! | ATTTCATTATATCTGAGCTA+TGG | - | tig0028916:29513-29532 | Msa1439970:intron | 25.0% |
| ! | GTAGTTAAATTTCACAAATG+GGG | + | tig0028916:29589-29608 | None:intergenic | 25.0% |
| !! | ACTACTACTGTATACATTTT+TGG | - | tig0028916:29604-29623 | Msa1439970:intron | 25.0% |
| !! | CTACTACTGTATACATTTTT+GGG | - | tig0028916:29605-29624 | Msa1439970:intron | 25.0% |
| ! | AATGTATGAGATGAAAGTTT+AGG | + | tig0028916:29878-29897 | None:intergenic | 25.0% |
| !! | TTTTCTAATGCTTCATGAAA+AGG | - | tig0028916:30018-30037 | Msa1439970:intron | 25.0% |
| !!! | TAGTTTTTAAGCCTTTTAAG+GGG | + | tig0028916:30937-30956 | None:intergenic | 25.0% |
| ! | AATAACGGTTTAAACAAACT+TGG | + | tig0028916:31008-31027 | None:intergenic | 25.0% |
| ! | CATAATCATAACAATATACC+TGG | - | tig0028916:31369-31388 | Msa1439970:CDS | 25.0% |
| ! | TAATCATAACAATATACCTG+GGG | - | tig0028916:31371-31390 | Msa1439970:CDS | 25.0% |
| ! | AAAAAGAAACACAGTTAAAG+GGG | + | tig0028916:32229-32248 | None:intergenic | 25.0% |
| !! | TTCTGGTTATGTTTCTTTAT+AGG | - | tig0028916:32534-32553 | Msa1439970:CDS | 25.0% |
| ! | ATGTTACATATCCAAATAGA+GGG | + | tig0028916:32679-32698 | None:intergenic | 25.0% |
| ! | TTTAGGAACCTTATAAAGAT+GGG | + | tig0028916:32729-32748 | None:intergenic | 25.0% |
| ! | ATTTAGGAACCTTATAAAGA+TGG | + | tig0028916:32730-32749 | None:intergenic | 25.0% |
| !! | TTTATTTGTTCTGAATCTTC+AGG | - | tig0028916:32965-32984 | Msa1439970:CDS | 25.0% |
| ! | GATGTAATAAAACATTACCA+AGG | + | tig0028916:33037-33056 | None:intergenic | 25.0% |
| ! | ACATCAAAATTATCATCTTC+GGG | - | tig0028916:33052-33071 | Msa1439970:intron | 25.0% |
| ! | GAATTACTGCTTCAATAATT+TGG | - | tig0028916:33514-33533 | Msa1439970:intron | 25.0% |
| !!! | CTCGTTTTCATTATTGATTT+TGG | - | tig0028916:33550-33569 | Msa1439970:intron | 25.0% |
| ! | GATAAAAACTTCCAATTAAG+AGG | + | tig0028916:33981-34000 | None:intergenic | 25.0% |
| !! | AGTTTTTATCAACTTCCTAT+TGG | - | tig0028916:33991-34010 | Msa1439970:intron | 25.0% |
| ! | ATTCTTATACTGTACAATGT+AGG | + | tig0028916:34252-34271 | None:intergenic | 25.0% |
| CAAATTGAAGGTTTCAATTC+CGG | - | tig0028916:28477-28496 | Msa1439970:intron | 30.0% | |
| CGATATAGTTGTTAATGCAA+TGG | - | tig0028916:28509-28528 | Msa1439970:intron | 30.0% | |
| ATAACCTGAAATATGAACTG+CGG | + | tig0028916:28569-28588 | None:intergenic | 30.0% | |
| AATGAAACAAGGAATGATTG+TGG | + | tig0028916:28598-28617 | None:intergenic | 30.0% | |
| GATAGAGAGAAAATGAAACA+AGG | + | tig0028916:28609-28628 | None:intergenic | 30.0% | |
| ! | ATACGGATTACATTATTCAG+GGG | + | tig0028916:28689-28708 | None:intergenic | 30.0% |
| ! | CTTCATGATGTGTGTAATTT+TGG | - | tig0028916:28715-28734 | Msa1439970:intron | 30.0% |
| !! | ATTGTTATCATCGATTTGCA+GGG | + | tig0028916:29214-29233 | None:intergenic | 30.0% |
| TGATAACAATGTTAATGACG+AGG | - | tig0028916:29224-29243 | Msa1439970:CDS | 30.0% | |
| GTGTATCATTACATCTATGT+AGG | - | tig0028916:29469-29488 | Msa1439970:intron | 30.0% | |
| !!! | TACATTTTTGGGTCAGTTAT+TGG | - | tig0028916:29616-29635 | Msa1439970:intron | 30.0% |
| !! | TGTATCATTGGCCTTTATTT+GGG | - | tig0028916:29954-29973 | Msa1439970:intron | 30.0% |
| TAACCACAAAACCCAAATAA+AGG | + | tig0028916:29968-29987 | None:intergenic | 30.0% | |
| CTTCATGAAAAGGTTTGAAT+TGG | - | tig0028916:30028-30047 | Msa1439970:intron | 30.0% | |
| ATTCATTCTGATAACACCAA+GGG | - | tig0028916:30137-30156 | Msa1439970:intron | 30.0% | |
| GAGTCTTAAAAGTGATCTAA+AGG | - | tig0028916:30217-30236 | Msa1439970:intron | 30.0% | |
| ACATTTCTGATTCCAATCAA+CGG | - | tig0028916:30300-30319 | Msa1439970:intron | 30.0% | |
| ACCATTCAGATAACAACAAT+AGG | - | tig0028916:30516-30535 | Msa1439970:intron | 30.0% | |
| ! | ACCTATTGTTGTTATCTGAA+TGG | + | tig0028916:30520-30539 | None:intergenic | 30.0% |
| TTCAGATAACAACAATAGGT+TGG | - | tig0028916:30520-30539 | Msa1439970:intron | 30.0% | |
| !! | AGTTTTTAAGCCTTTTAAGG+GGG | + | tig0028916:30936-30955 | None:intergenic | 30.0% |
| ! | AACAAACTTGGTCTGTTTTA+GGG | + | tig0028916:30996-31015 | None:intergenic | 30.0% |
| ! | AAACAAACTTGGTCTGTTTT+AGG | + | tig0028916:30997-31016 | None:intergenic | 30.0% |
| TCAAGAATAGATACTTCTTG+AGG | + | tig0028916:31054-31073 | None:intergenic | 30.0% | |
| AATTCTGCAAATCAATCATG+TGG | - | tig0028916:31098-31117 | Msa1439970:CDS | 30.0% | |
| AAATCAATCATGTGGCATAT+AGG | - | tig0028916:31106-31125 | Msa1439970:CDS | 30.0% | |
| ! | TCTTTTTGACATTACTGCTT+TGG | - | tig0028916:31186-31205 | Msa1439970:CDS | 30.0% |
| GTAAAAATGCAAACTGCTTA+TGG | + | tig0028916:31317-31336 | None:intergenic | 30.0% | |
| ! | AAGCAGTTTGCATTTTTACA+TGG | - | tig0028916:31318-31337 | Msa1439970:CDS | 30.0% |
| ATGTTCTTGTATGTAAGATC+CGG | + | tig0028916:31352-31371 | None:intergenic | 30.0% | |
| AATCATAACAATATACCTGG+GGG | - | tig0028916:31372-31391 | Msa1439970:CDS | 30.0% | |
| AACATACCATTGGTATAGAA+TGG | - | tig0028916:31814-31833 | Msa1439970:intron | 30.0% | |
| ACATACCATTGGTATAGAAT+GGG | - | tig0028916:31815-31834 | Msa1439970:intron | 30.0% | |
| CAACAGTTCTTCTATATCAT+TGG | - | tig0028916:31845-31864 | Msa1439970:intron | 30.0% | |
| AGAAGGATTACCAAATCTAA+TGG | + | tig0028916:32044-32063 | None:intergenic | 30.0% | |
| TGCTTACATTGTAACTAAGA+AGG | + | tig0028916:32061-32080 | None:intergenic | 30.0% | |
| AATGGTTCACAACAAACATT+GGG | + | tig0028916:32176-32195 | None:intergenic | 30.0% | |
| AAATGGTTCACAACAAACAT+TGG | + | tig0028916:32177-32196 | None:intergenic | 30.0% | |
| ATAATTGAACTTCCAGAAGA+GGG | + | tig0028916:32271-32290 | None:intergenic | 30.0% | |
| TGTAAAATAGTCAAGAGTCA+TGG | + | tig0028916:32333-32352 | None:intergenic | 30.0% | |
| !! | TCTCTTGCTTTTACTATTTC+TGG | - | tig0028916:32517-32536 | Msa1439970:CDS | 30.0% |
| AAATACTAACATGTGTCCTA+AGG | - | tig0028916:32558-32577 | Msa1439970:CDS | 30.0% | |
| AATACTAACATGTGTCCTAA+GGG | - | tig0028916:32559-32578 | Msa1439970:CDS | 30.0% | |
| CATGTTACATATCCAAATAG+AGG | + | tig0028916:32680-32699 | None:intergenic | 30.0% | |
| ATATGTAACATGTTCCCTTA+AGG | - | tig0028916:32688-32707 | Msa1439970:intron | 30.0% | |
| AGCTTAGTACTCACAAATTT+AGG | + | tig0028916:32746-32765 | None:intergenic | 30.0% | |
| ! | ATTTTGCAGTGTAAGTTTTG+AGG | - | tig0028916:32803-32822 | Msa1439970:CDS | 30.0% |
| ! | GATAGTTTGAATGATAATGC+AGG | - | tig0028916:33109-33128 | Msa1439970:intron | 30.0% |
| AAATGTTAGACCTTACATCA+TGG | - | tig0028916:33405-33424 | Msa1439970:CDS | 30.0% | |
| CAAAGATATACCATGATGTA+AGG | + | tig0028916:33418-33437 | None:intergenic | 30.0% | |
| !!! | TATTGATTTTGGGTTTGTTC+TGG | - | tig0028916:33561-33580 | Msa1439970:intron | 30.0% |
| ATTAAGAGGCTCTATGTTAT+GGG | + | tig0028916:33967-33986 | None:intergenic | 30.0% | |
| AATTAAGAGGCTCTATGTTA+TGG | + | tig0028916:33968-33987 | None:intergenic | 30.0% | |
| ATAACATAGAGCCTCTTAAT+TGG | - | tig0028916:33967-33986 | Msa1439970:intron | 30.0% | |
| TTATCAACTTCCTATTGGAT+AGG | - | tig0028916:33996-34015 | Msa1439970:intron | 30.0% | |
| ! | GATTGCTAATGATTTGTGAA+AGG | - | tig0028916:34143-34162 | Msa1439970:CDS | 30.0% |
| TGATCAGTATATTGTACACA+CGG | - | tig0028916:34361-34380 | Msa1439970:CDS | 30.0% | |
| ATATTACAGGTATATGGAAG+GGG | + | tig0028916:34403-34422 | None:intergenic | 30.0% | |
| GATATTACAGGTATATGGAA+GGG | + | tig0028916:34404-34423 | None:intergenic | 30.0% | |
| AGATATTACAGGTATATGGA+AGG | + | tig0028916:34405-34424 | None:intergenic | 30.0% | |
| TTCCATATACCTGTAATATC+TGG | - | tig0028916:34404-34423 | Msa1439970:five_prime_UTR | 30.0% | |
| ATCCAGATATTACAGGTATA+TGG | + | tig0028916:34409-34428 | None:intergenic | 30.0% | |
| GTTCTCCATCATATCATCAA+AGG | + | tig0028916:28301-28320 | None:intergenic | 35.0% | |
| TTGGATCATTGTTATCGGAA+TGG | + | tig0028916:28401-28420 | None:intergenic | 35.0% | |
| AATTTGAACATGTTCGCAGA+GGG | + | tig0028916:28463-28482 | None:intergenic | 35.0% | |
| TGCGAACATGTTCAAATTGA+AGG | - | tig0028916:28465-28484 | Msa1439970:intron | 35.0% | |
| AACTATATCGGAAAAAGAGC+CGG | + | tig0028916:28499-28518 | None:intergenic | 35.0% | |
| TAACCTGAAATATGAACTGC+GGG | + | tig0028916:28568-28587 | None:intergenic | 35.0% | |
| GATTACATTATTCAGGGGAA+CGG | + | tig0028916:28684-28703 | None:intergenic | 35.0% | |
| ! | GAAGTGTTTAAGTGCATGTT+TGG | - | tig0028916:28739-28758 | Msa1439970:intron | 35.0% |
| TTATCTGGTGTTTGTGATTC+AGG | - | tig0028916:29142-29161 | Msa1439970:intron | 35.0% | |
| !! | CATTGTTATCATCGATTTGC+AGG | + | tig0028916:29215-29234 | None:intergenic | 35.0% |
| ATTGCCTTGGCATATCTTTA+TGG | - | tig0028916:29255-29274 | Msa1439970:intron | 35.0% | |
| TTGCCTTGGCATATCTTTAT+GGG | - | tig0028916:29256-29275 | Msa1439970:intron | 35.0% | |
| GTAAACAACAACATACCTGA+AGG | + | tig0028916:29344-29363 | None:intergenic | 35.0% | |
| TTCAAACTTCTTGGCTTATC+AGG | - | tig0028916:29538-29557 | Msa1439970:CDS | 35.0% | |
| AACCAAGATTATGGCATTCA+TGG | - | tig0028916:29672-29691 | Msa1439970:CDS | 35.0% | |
| ACCAAGATTATGGCATTCAT+GGG | - | tig0028916:29673-29692 | Msa1439970:CDS | 35.0% | |
| !! | GTGTATCATTGGCCTTTATT+TGG | - | tig0028916:29953-29972 | Msa1439970:intron | 35.0% |
| CATTCATTCTGATAACACCA+AGG | - | tig0028916:30136-30155 | Msa1439970:intron | 35.0% | |
| ! | AAGATGTTGGAAACTGACTT+GGG | - | tig0028916:30188-30207 | Msa1439970:intron | 35.0% |
| AATCTCCAAGCTCAACTAAA+AGG | + | tig0028916:30259-30278 | None:intergenic | 35.0% | |
| CATTTCTGATTCCAATCAAC+GGG | - | tig0028916:30301-30320 | Msa1439970:intron | 35.0% | |
| ! | TGGATTCAAGTTTGGTGAAA+TGG | + | tig0028916:30345-30364 | None:intergenic | 35.0% |
| GACAATGAATTACCCAATGA+AGG | + | tig0028916:30392-30411 | None:intergenic | 35.0% | |
| AATTCATTGTCTGATCCAGA+CGG | - | tig0028916:30401-30420 | Msa1439970:intron | 35.0% | |
| GAGAACATCATGTTATGTTG+AGG | - | tig0028916:30427-30446 | Msa1439970:intron | 35.0% | |
| ! | TTTTCATCGAGTTCTTGTAG+TGG | - | tig0028916:30566-30585 | Msa1439970:intron | 35.0% |
| TTTCATCGAGTTCTTGTAGT+GGG | - | tig0028916:30567-30586 | Msa1439970:intron | 35.0% | |
| TCATCTCTATAGTTTCCTCT+GGG | + | tig0028916:30677-30696 | None:intergenic | 35.0% | |
| TTCATCTCTATAGTTTCCTC+TGG | + | tig0028916:30678-30697 | None:intergenic | 35.0% | |
| AAGCTGTAAATGATGGTCTA+TGG | - | tig0028916:30810-30829 | Msa1439970:CDS | 35.0% | |
| ! | CGAAAAGTGTAACATGTCAT+TGG | + | tig0028916:30967-30986 | None:intergenic | 35.0% |
| !! | ACAAACTTGGTCTGTTTTAG+GGG | + | tig0028916:30995-31014 | None:intergenic | 35.0% |
| !! | GAAAAGTGTTAGGGGAATAA+CGG | + | tig0028916:31023-31042 | None:intergenic | 35.0% |
| !! | AGGAAAACGAAAAGTGTTAG+GGG | + | tig0028916:31031-31050 | None:intergenic | 35.0% |
| !! | GAGGAAAACGAAAAGTGTTA+GGG | + | tig0028916:31032-31051 | None:intergenic | 35.0% |
| AGAATAGATACTTCTTGAGG+AGG | + | tig0028916:31051-31070 | None:intergenic | 35.0% | |
| ! | TTTTTACATGGATCTACCAC+CGG | - | tig0028916:31330-31349 | Msa1439970:CDS | 35.0% |
| TATGTTGCTGAATCTTCTAC+AGG | - | tig0028916:31408-31427 | Msa1439970:CDS | 35.0% | |
| TCTTCTACAGGTGAAAGAAA+TGG | - | tig0028916:31420-31439 | Msa1439970:CDS | 35.0% | |
| !! | ATGTTAGAGGTGCTATTGAT+GGG | - | tig0028916:31466-31485 | Msa1439970:intron | 35.0% |
| TACATACAGAGCTAACACAA+AGG | - | tig0028916:31712-31731 | Msa1439970:intron | 35.0% | |
| ACATACAGAGCTAACACAAA+GGG | - | tig0028916:31713-31732 | Msa1439970:intron | 35.0% | |
| AACACAAAGGGAACAAGAAA+TGG | - | tig0028916:31725-31744 | Msa1439970:intron | 35.0% | |
| ACACAAAGGGAACAAGAAAT+GGG | - | tig0028916:31726-31745 | Msa1439970:intron | 35.0% | |
| TGGTGTCTCTAACAATTGTA+CGG | + | tig0028916:31793-31812 | None:intergenic | 35.0% | |
| TCTATACCAATGGTATGTTC+TGG | + | tig0028916:31813-31832 | None:intergenic | 35.0% | |
| ATTCTCCCATTCTATACCAA+TGG | + | tig0028916:31823-31842 | None:intergenic | 35.0% | |
| ATGGTTCACAACAAACATTG+GGG | + | tig0028916:32175-32194 | None:intergenic | 35.0% | |
| TAATTGAACTTCCAGAAGAG+GGG | + | tig0028916:32270-32289 | None:intergenic | 35.0% | |
| GATAATTGAACTTCCAGAAG+AGG | + | tig0028916:32272-32291 | None:intergenic | 35.0% | |
| TGGAAGTTCAATTATCTGCT+TGG | - | tig0028916:32276-32295 | Msa1439970:CDS | 35.0% | |
| ATGCATTCAGGAAATAGCAA+TGG | + | tig0028916:32402-32421 | None:intergenic | 35.0% | |
| !! | ATTGCTATTTCCTGAATGCA+TGG | - | tig0028916:32401-32420 | Msa1439970:CDS | 35.0% |
| TTGACATATTGTCTTGGAAG+TGG | - | tig0028916:32604-32623 | Msa1439970:CDS | 35.0% | |
| CAAGACTATATCCCTCTATT+TGG | - | tig0028916:32665-32684 | Msa1439970:intron | 35.0% | |
| CTTGCTAACAAGTTCCTTAA+GGG | + | tig0028916:32705-32724 | None:intergenic | 35.0% | |
| TCTTGCTAACAAGTTCCTTA+AGG | + | tig0028916:32706-32725 | None:intergenic | 35.0% | |
| TAGCAAGACCCATCTTTATA+AGG | - | tig0028916:32718-32737 | Msa1439970:intron | 35.0% | |
| !!! | TTTTCTATGCTGGTTCTTTG+TGG | - | tig0028916:32871-32890 | Msa1439970:intron | 35.0% |
| TCAATTATTTGGGCCTAAGT+TGG | - | tig0028916:33207-33226 | Msa1439970:intron | 35.0% | |
| !! | GTTCGGAAGCTTTAAACAAA+CGG | - | tig0028916:33629-33648 | Msa1439970:intron | 35.0% |
| !! | TTCGGAAGCTTTAAACAAAC+GGG | - | tig0028916:33630-33649 | Msa1439970:intron | 35.0% |
| CTTGCTGATCTTCTACAAAA+TGG | - | tig0028916:33714-33733 | Msa1439970:intron | 35.0% | |
| CACTACAGCAATAACTCTTA+GGG | + | tig0028916:33742-33761 | None:intergenic | 35.0% | |
| ! | GCAGCTTGTTTGAATTAAAC+AGG | - | tig0028916:33761-33780 | Msa1439970:intron | 35.0% |
| CGAGTTCCACTTAAATAAGA+CGG | + | tig0028916:34026-34045 | None:intergenic | 35.0% | |
| TGTGTACATCCAGATATTAC+AGG | + | tig0028916:34416-34435 | None:intergenic | 35.0% | |
| ATGCAATTCGAACAACACTG+AGG | - | tig0028916:28272-28291 | Msa1439970:three_prime_UTR | 40.0% | |
| GAGGGTTGTTTGGATATTGA+GGG | + | tig0028916:28323-28342 | None:intergenic | 40.0% | |
| TTATCGGAATGGTGAGATGA+TGG | + | tig0028916:28390-28409 | None:intergenic | 40.0% | |
| GGTGGTTGGATCATTGTTAT+CGG | + | tig0028916:28406-28425 | None:intergenic | 40.0% | |
| CAATTTGAACATGTTCGCAG+AGG | + | tig0028916:28464-28483 | None:intergenic | 40.0% | |
| TGATTCAGGAACATGCTTCA+TGG | - | tig0028916:29156-29175 | Msa1439970:intron | 40.0% | |
| GTTCCCATAAAGATATGCCA+AGG | + | tig0028916:29262-29281 | None:intergenic | 40.0% | |
| GCTATGGACTTCAAACTTCT+TGG | - | tig0028916:29529-29548 | Msa1439970:CDS | 40.0% | |
| GACTGTTTACTAGGTGTTTG+CGG | - | tig0028916:29647-29666 | Msa1439970:intron | 40.0% | |
| TTTGCGGAGAACCAAGATTA+TGG | - | tig0028916:29663-29682 | Msa1439970:CDS | 40.0% | |
| CCAAGATTATGGCATTCATG+GGG | - | tig0028916:29674-29693 | Msa1439970:CDS | 40.0% | |
| AACCAAGTGCTTGCTTCATT+TGG | - | tig0028916:29770-29789 | Msa1439970:intron | 40.0% | |
| !! | CTTGCTTCATTTGGTGGTTT+TGG | - | tig0028916:29779-29798 | Msa1439970:intron | 40.0% |
| TACTGACCTCTAATGATCTG+TGG | - | tig0028916:29906-29925 | Msa1439970:intron | 40.0% | |
| AGAAGCGGTAAGTGTATCAT+TGG | - | tig0028916:29942-29961 | Msa1439970:intron | 40.0% | |
| !! | TGGCCTTTATTTGGGTTTTG+TGG | - | tig0028916:29962-29981 | Msa1439970:intron | 40.0% |
| AAGATTGAACATCCTGCACA+TGG | - | tig0028916:30086-30105 | Msa1439970:intron | 40.0% | |
| TCTGATAACACCAAGGGAAA+AGG | - | tig0028916:30143-30162 | Msa1439970:intron | 40.0% | |
| ! | ATCAGCTATACCTTTTCCCT+TGG | + | tig0028916:30156-30175 | None:intergenic | 40.0% |
| ! | AAGGGAAAAGGTATAGCTGA+TGG | - | tig0028916:30155-30174 | Msa1439970:intron | 40.0% |
| CAAGATGTTGGAAACTGACT+TGG | - | tig0028916:30187-30206 | Msa1439970:intron | 40.0% | |
| !! | AGATGTTGGAAACTGACTTG+GGG | - | tig0028916:30189-30208 | Msa1439970:intron | 40.0% |
| CCAAGCTCAACTAAAAGGTT+AGG | + | tig0028916:30254-30273 | None:intergenic | 40.0% | |
| !! | CCTAACCTTTTAGTTGAGCT+TGG | - | tig0028916:30251-30270 | Msa1439970:intron | 40.0% |
| ! | GGATACGATGGATTCAAGTT+TGG | + | tig0028916:30353-30372 | None:intergenic | 40.0% |
| TCCATCGTATCCTTGTGATA+TGG | - | tig0028916:30361-30380 | Msa1439970:intron | 40.0% | |
| TCCATATCACAAGGATACGA+TGG | + | tig0028916:30365-30384 | None:intergenic | 40.0% | |
| TCGTATCCTTGTGATATGGA+AGG | - | tig0028916:30365-30384 | Msa1439970:intron | 40.0% | |
| TGATATGGAAGGACCTTCAT+TGG | - | tig0028916:30376-30395 | Msa1439970:intron | 40.0% | |
| GATATGGAAGGACCTTCATT+GGG | - | tig0028916:30377-30396 | Msa1439970:intron | 40.0% | |
| ATTCATTGTCTGATCCAGAC+GGG | - | tig0028916:30402-30421 | Msa1439970:intron | 40.0% | |
| GTTGTTATCTGAATGGTAGC+AGG | + | tig0028916:30513-30532 | None:intergenic | 40.0% | |
| ! | TGACCTGTTTTCTGCCTATA+TGG | + | tig0028916:30646-30665 | None:intergenic | 40.0% |
| AGAAAGCAGCTTGAAGAGAT+AGG | - | tig0028916:30776-30795 | Msa1439970:intron | 40.0% | |
| CCATCATTTACAGCTTTGCA+AGG | + | tig0028916:30806-30825 | None:intergenic | 40.0% | |
| CCTTGCAAAGCTGTAAATGA+TGG | - | tig0028916:30803-30822 | Msa1439970:CDS | 40.0% | |
| ! | CTTTCGTTTTCCCCCTTAAA+AGG | - | tig0028916:30923-30942 | Msa1439970:CDS | 40.0% |
| !! | GGAGGAAAACGAAAAGTGTT+AGG | + | tig0028916:31033-31052 | None:intergenic | 40.0% |
| GGCATATAGGTCACAATACT+TGG | - | tig0028916:31119-31138 | Msa1439970:CDS | 40.0% | |
| TTCAGATGCTTCTTAGTCAG+AGG | - | tig0028916:31229-31248 | Msa1439970:CDS | 40.0% | |
| TCAGATGCTTCTTAGTCAGA+GGG | - | tig0028916:31230-31249 | Msa1439970:CDS | 40.0% | |
| TTCTTGTATGTAAGATCCGG+TGG | + | tig0028916:31349-31368 | None:intergenic | 40.0% | |
| ! | ATGGCTCTTTTAGACCTGTA+CGG | - | tig0028916:31439-31458 | Msa1439970:CDS | 40.0% |
| !! | CATGTTAGAGGTGCTATTGA+TGG | - | tig0028916:31465-31484 | Msa1439970:intron | 40.0% |
| CAGGAACAAATGTAGTTCCA+CGG | + | tig0028916:31506-31525 | None:intergenic | 40.0% | |
| AACTACATTTGTTCCTGCAG+CGG | - | tig0028916:31509-31528 | Msa1439970:intron | 40.0% | |
| GAAAAGACAAATCGTGTAGG+AGG | + | tig0028916:31540-31559 | None:intergenic | 40.0% | |
| CGAGAAAAGACAAATCGTGT+AGG | + | tig0028916:31543-31562 | None:intergenic | 40.0% | |
| ACGTGCTTCTGAATCATCAT+TGG | + | tig0028916:31610-31629 | None:intergenic | 40.0% | |
| !! | GATGGATTGACAGCTTTAGT+CGG | - | tig0028916:31657-31676 | Msa1439970:intron | 40.0% |
| ! | ATGGATTGACAGCTTTAGTC+GGG | - | tig0028916:31658-31677 | Msa1439970:intron | 40.0% |
| GGTGTCTCTAACAATTGTAC+GGG | + | tig0028916:31792-31811 | None:intergenic | 40.0% | |
| TGACTTACCCAAAGCGAAAA+GGG | + | tig0028916:31899-31918 | None:intergenic | 40.0% | |
| TTGCTAGTTATCTTGTGAGC+TGG | - | tig0028916:31968-31987 | Msa1439970:CDS | 40.0% | |
| !! | TGTAGTGGGTCCATTAGATT+TGG | - | tig0028916:32031-32050 | Msa1439970:CDS | 40.0% |
| GAGCGACAAGTAGAGAAAAA+TGG | + | tig0028916:32194-32213 | None:intergenic | 40.0% | |
| ACAGTTAAAGGGGAACAAGA+GGG | + | tig0028916:32219-32238 | None:intergenic | 40.0% | |
| TGAGAACTTACACACTCTCT+TGG | - | tig0028916:32300-32319 | Msa1439970:CDS | 40.0% | |
| TTACACACTCTCTTGGAAGA+TGG | - | tig0028916:32307-32326 | Msa1439970:CDS | 40.0% | |
| ACCTGCCTTACAATTCAAGT+GGG | - | tig0028916:32427-32446 | Msa1439970:CDS | 40.0% | |
| CGAATCCCACTTGAATTGTA+AGG | + | tig0028916:32435-32454 | None:intergenic | 40.0% | |
| ATTCCTTGACATTTGCCCTT+AGG | + | tig0028916:32577-32596 | None:intergenic | 40.0% | |
| !!! | TAAGTTTTGAGGAAGTGCAC+AGG | - | tig0028916:32814-32833 | Msa1439970:intron | 40.0% |
| ! | TCTCCAGAAGTTTTCTATGC+TGG | - | tig0028916:32861-32880 | Msa1439970:intron | 40.0% |
| GAACCAGCATAGAAAACTTC+TGG | + | tig0028916:32867-32886 | None:intergenic | 40.0% | |
| TAAGACGATCTTGACTGTCT+TGG | - | tig0028916:32931-32950 | Msa1439970:intron | 40.0% | |
| GAATCTTCAGGTCAGTATTC+AGG | - | tig0028916:32977-32996 | Msa1439970:CDS | 40.0% | |
| ! | TTTTAATGATGAAGACCCCC+AGG | - | tig0028916:33001-33020 | Msa1439970:CDS | 40.0% |
| TTTAATGATGAAGACCCCCA+GGG | - | tig0028916:33002-33021 | Msa1439970:CDS | 40.0% | |
| AAAAAAAAAGGTCGCTTGCG+TGG | + | tig0028916:33302-33321 | None:intergenic | 40.0% | |
| ! | AAGAGGGAAATGTTGGTGTT+CGG | - | tig0028916:33612-33631 | Msa1439970:intron | 40.0% |
| CTTCTACCTAAAGCTCCTAA+AGG | - | tig0028916:33657-33676 | Msa1439970:intron | 40.0% | |
| TACCTAAAGCTCCTAAAGGA+TGG | - | tig0028916:33661-33680 | Msa1439970:intron | 40.0% | |
| ACCTAAAGCTCCTAAAGGAT+GGG | - | tig0028916:33662-33681 | Msa1439970:intron | 40.0% | |
| GCACTACAGCAATAACTCTT+AGG | + | tig0028916:33743-33762 | None:intergenic | 40.0% | |
| ACAGTATAGTAGTGAGTGTG+TGG | + | tig0028916:33835-33854 | None:intergenic | 40.0% | |
| !! | GAGTAGGTCTCATGTTTTGA+TGG | + | tig0028916:33885-33904 | None:intergenic | 40.0% |
| ATCCAGTTATTGTCACGAGT+AGG | + | tig0028916:33901-33920 | None:intergenic | 40.0% | |
| ! | TTTCTTTTGCCCACTCTTGT+AGG | - | tig0028916:34207-34226 | Msa1439970:CDS | 40.0% |
| TAGGAGATGAACGATGGTTA+AGG | - | tig0028916:34226-34245 | Msa1439970:CDS | 40.0% | |
| CAATTATACGAGACTTGCCG+TGG | - | tig0028916:28184-28203 | Msa1439970:three_prime_UTR | 45.0% | |
| TACATTCGCACCACTTTCCA+CGG | + | tig0028916:28204-28223 | None:intergenic | 45.0% | |
| ! | GGCTGCCTTTGATGATATGA+TGG | - | tig0028916:28293-28312 | Msa1439970:three_prime_UTR | 45.0% |
| GGAGGGTTGTTTGGATATTG+AGG | + | tig0028916:28324-28343 | None:intergenic | 45.0% | |
| ! | ATCGAGAGCACGTAATTCAG+CGG | + | tig0028916:28427-28446 | None:intergenic | 45.0% |
| GAGACGATGAAGGTGATAAG+TGG | + | tig0028916:28538-28557 | None:intergenic | 45.0% | |
| TGAAATATGAACTGCGGGAG+AGG | + | tig0028916:28563-28582 | None:intergenic | 45.0% | |
| TCTCCCGCAGTTCATATTTC+AGG | - | tig0028916:28562-28581 | Msa1439970:intron | 45.0% | |
| ACATACCTGAAGGTCGAGAA+AGG | + | tig0028916:29334-29353 | None:intergenic | 45.0% | |
| AATGGGGCTATACAAGCATC+TGG | + | tig0028916:29573-29592 | None:intergenic | 45.0% | |
| ! | TGGGTCAGTTATTGGTTGTG+TGG | - | tig0028916:29624-29643 | Msa1439970:intron | 45.0% |
| ! | GGGTCAGTTATTGGTTGTGT+GGG | - | tig0028916:29625-29644 | Msa1439970:intron | 45.0% |
| GTTGTGTGGGACTGTTTACT+AGG | - | tig0028916:29638-29657 | Msa1439970:intron | 45.0% | |
| CCCCATGAATGCCATAATCT+TGG | + | tig0028916:29677-29696 | None:intergenic | 45.0% | |
| AGCGTGTTAGAACTGCTTGT+TGG | - | tig0028916:29697-29716 | Msa1439970:intron | 45.0% | |
| GCGTGTTAGAACTGCTTGTT+GGG | - | tig0028916:29698-29717 | Msa1439970:intron | 45.0% | |
| ! | CGTGTTAGAACTGCTTGTTG+GGG | - | tig0028916:29699-29718 | Msa1439970:intron | 45.0% |
| TGGAGTTGAGAGAGGTAACA+AGG | - | tig0028916:29745-29764 | Msa1439970:intron | 45.0% | |
| CACCAAATGAAGCAAGCACT+TGG | + | tig0028916:29775-29794 | None:intergenic | 45.0% | |
| CAAGTGCTTGCTTCATTTGG+TGG | - | tig0028916:29773-29792 | Msa1439970:intron | 45.0% | |
| ! | TGGCAACATTCACTTGTTGC+AGG | - | tig0028916:29847-29866 | Msa1439970:CDS | 45.0% |
| GGGTATCCACAGATCATTAG+AGG | + | tig0028916:29915-29934 | None:intergenic | 45.0% | |
| ACTTACCGCTTCTCTTCACA+GGG | + | tig0028916:29935-29954 | None:intergenic | 45.0% | |
| !! | ATTGGCTTTCCACACATTCC+TGG | - | tig0028916:30046-30065 | Msa1439970:intron | 45.0% |
| !! | CACTTTTTGCCAGGAATGTG+TGG | + | tig0028916:30058-30077 | None:intergenic | 45.0% |
| TGGCTGCACTAACAAGATGT+TGG | - | tig0028916:30175-30194 | Msa1439970:intron | 45.0% | |
| GTTGAGCTTGGAGATTCAGA+AGG | - | tig0028916:30263-30282 | Msa1439970:intron | 45.0% | |
| ! | AGCAAGTTGAACCCGTTGAT+TGG | + | tig0028916:30315-30334 | None:intergenic | 45.0% |
| GAAGGTCCTTCCATATCACA+AGG | + | tig0028916:30374-30393 | None:intergenic | 45.0% | |
| TTCATTGTCTGATCCAGACG+GGG | - | tig0028916:30403-30422 | Msa1439970:intron | 45.0% | |
| ! | TGTTATGTTGAGGTGCCTCT+TGG | - | tig0028916:30437-30456 | Msa1439970:intron | 45.0% |
| !! | ACTACTGGAGTGGGTATTGA+AGG | - | tig0028916:30470-30489 | Msa1439970:intron | 45.0% |
| !! | CTACTGGAGTGGGTATTGAA+GGG | - | tig0028916:30471-30490 | Msa1439970:intron | 45.0% |
| TCCAGTGAATGGGGAAGATA+TGG | - | tig0028916:30596-30615 | Msa1439970:intron | 45.0% | |
| TCCATATCTTCCCCATTCAC+TGG | + | tig0028916:30600-30619 | None:intergenic | 45.0% | |
| ATGGAACCCCTTTGCTTTCA+TGG | - | tig0028916:30615-30634 | Msa1439970:intron | 45.0% | |
| TGGAACCCCTTTGCTTTCAT+GGG | - | tig0028916:30616-30635 | Msa1439970:intron | 45.0% | |
| TGGCCATATAGGCAGAAAAC+AGG | - | tig0028916:30640-30659 | Msa1439970:intron | 45.0% | |
| AAATGATGGTCTATGGCTGC+AGG | - | tig0028916:30817-30836 | Msa1439970:CDS | 45.0% | |
| CATAACAATATACCTGGGGG+TGG | - | tig0028916:31375-31394 | Msa1439970:CDS | 45.0% | |
| TATATATTTCCACCACCCCC+AGG | + | tig0028916:31390-31409 | None:intergenic | 45.0% | |
| ! | TGGCTCTTTTAGACCTGTAC+GGG | - | tig0028916:31440-31459 | Msa1439970:CDS | 45.0% |
| !! | ATTGATGGGCTTGCAGGTAT+TGG | - | tig0028916:31480-31499 | Msa1439970:intron | 45.0% |
| !! | GTCTTTTCTCGTGTGCCATT+TGG | - | tig0028916:31552-31571 | Msa1439970:intron | 45.0% |
| TTTCTGTTGCCAACGCCAAA+TGG | + | tig0028916:31570-31589 | None:intergenic | 45.0% | |
| TTGTTCCATAATTCCCTCCC+TGG | + | tig0028916:31689-31708 | None:intergenic | 45.0% | |
| !! | ATGGGATTGCAAAGTACTGC+TGG | - | tig0028916:31744-31763 | Msa1439970:intron | 45.0% |
| !! | TGGGATTGCAAAGTACTGCT+GGG | - | tig0028916:31745-31764 | Msa1439970:intron | 45.0% |
| GAGACACCAGAACATACCAT+TGG | - | tig0028916:31804-31823 | Msa1439970:intron | 45.0% | |
| AAAGGGGGGAAATGGCTTAA+AGG | + | tig0028916:31882-31901 | None:intergenic | 45.0% | |
| ! | ATTTCCCCCCTTTTCGCTTT+GGG | - | tig0028916:31889-31908 | Msa1439970:CDS | 45.0% |
| ACTTACCCAAAGCGAAAAGG+GGG | + | tig0028916:31897-31916 | None:intergenic | 45.0% | |
| GACTTACCCAAAGCGAAAAG+GGG | + | tig0028916:31898-31917 | None:intergenic | 45.0% | |
| CTGACTTACCCAAAGCGAAA+AGG | + | tig0028916:31900-31919 | None:intergenic | 45.0% | |
| ACTACAAGCTTCTAGTGTGG+TGG | + | tig0028916:32017-32036 | None:intergenic | 45.0% | |
| ACCACACTAGAAGCTTGTAG+TGG | - | tig0028916:32016-32035 | Msa1439970:CDS | 45.0% | |
| CCACACTAGAAGCTTGTAGT+GGG | - | tig0028916:32017-32036 | Msa1439970:CDS | 45.0% | |
| CACAGTTAAAGGGGAACAAG+AGG | + | tig0028916:32220-32239 | None:intergenic | 45.0% | |
| TTGAATCATCTCCCCTCTTC+TGG | - | tig0028916:32256-32275 | Msa1439970:CDS | 45.0% | |
| CACCTGCCTTACAATTCAAG+TGG | - | tig0028916:32426-32445 | Msa1439970:CDS | 45.0% | |
| TCCCACTTGAATTGTAAGGC+AGG | + | tig0028916:32431-32450 | None:intergenic | 45.0% | |
| TGTCCTAAGGGCAAATGTCA+AGG | - | tig0028916:32571-32590 | Msa1439970:CDS | 45.0% | |
| !! | CTATGCTGGTTCTTTGTGGA+AGG | - | tig0028916:32875-32894 | Msa1439970:intron | 45.0% |
| ! | CAGGATTGTTTCTTCACCGT+CGG | - | tig0028916:33128-33147 | Msa1439970:intron | 45.0% |
| ! | ATTGTTTCTTCACCGTCGGA+AGG | - | tig0028916:33132-33151 | Msa1439970:intron | 45.0% |
| CAGAGATAACTGATGTGCAC+AGG | - | tig0028916:33155-33174 | Msa1439970:CDS | 45.0% | |
| GATAACTGATGTGCACAGGA+AGG | - | tig0028916:33159-33178 | Msa1439970:CDS | 45.0% | |
| !! | GTATGTTGACTCGCGTGAAA+AGG | - | tig0028916:33460-33479 | Msa1439970:CDS | 45.0% |
| CCAACATTTCCCTCTTGGAT+GGG | + | tig0028916:33608-33627 | None:intergenic | 45.0% | |
| ACCAACATTTCCCTCTTGGA+TGG | + | tig0028916:33609-33628 | None:intergenic | 45.0% | |
| GAACACCAACATTTCCCTCT+TGG | + | tig0028916:33613-33632 | None:intergenic | 45.0% | |
| CCTAAAGCTCCTAAAGGATG+GGG | - | tig0028916:33663-33682 | Msa1439970:intron | 45.0% | |
| GACCTACTCGTGACAATAAC+TGG | - | tig0028916:33896-33915 | Msa1439970:intron | 45.0% | |
| !! | GGAGCACCGTCTTATTTAAG+TGG | - | tig0028916:34017-34036 | Msa1439970:intron | 45.0% |
| CGTTCATCTCCTACAAGAGT+GGG | + | tig0028916:34219-34238 | None:intergenic | 45.0% | |
| TCGTTCATCTCCTACAAGAG+TGG | + | tig0028916:34220-34239 | None:intergenic | 45.0% | |
| CTCTTGTAGGAGATGAACGA+TGG | - | tig0028916:34220-34239 | Msa1439970:CDS | 45.0% | |
| ! | TTTATTCCATGCATCGACGC+AGG | + | tig0028916:34496-34515 | None:intergenic | 45.0% |
| ! | AGATGATGGCTGCTTGGGAA+TGG | + | tig0028916:28376-28395 | None:intergenic | 50.0% |
| ! | TGGTGAGATGATGGCTGCTT+GGG | + | tig0028916:28381-28400 | None:intergenic | 50.0% |
| ! | ATGGTGAGATGATGGCTGCT+TGG | + | tig0028916:28382-28401 | None:intergenic | 50.0% |
| TATTCAGGGGAACGGAAGAG+TGG | + | tig0028916:28676-28695 | None:intergenic | 50.0% | |
| CGAGGCTATTGCAATTGCCT+TGG | - | tig0028916:29242-29261 | Msa1439970:intron | 50.0% | |
| CTGAAGGTCGAGAAAGGAAG+CGG | + | tig0028916:29328-29347 | None:intergenic | 50.0% | |
| GGATACCCTGTGAAGAGAAG+CGG | - | tig0028916:29927-29946 | Msa1439970:intron | 50.0% | |
| CACTTACCGCTTCTCTTCAC+AGG | + | tig0028916:29936-29955 | None:intergenic | 50.0% | |
| !! | TGCAGTGAGCACTTTTTGCC+AGG | + | tig0028916:30067-30086 | None:intergenic | 50.0% |
| CATCCTGCACATGGAATTCC+TGG | - | tig0028916:30095-30114 | Msa1439970:intron | 50.0% | |
| GAACCAGGAATTCCATGTGC+AGG | + | tig0028916:30101-30120 | None:intergenic | 50.0% | |
| !! | GGAATTCCTGGTTCTGAGTC+TGG | - | tig0028916:30107-30126 | Msa1439970:intron | 50.0% |
| GTAGTTGTTCCAGCACCAAG+AGG | + | tig0028916:30455-30474 | None:intergenic | 50.0% | |
| !! | CTTGGTGCTGGAACAACTAC+TGG | - | tig0028916:30455-30474 | Msa1439970:intron | 50.0% |
| TGCTGGAACAACTACTGGAG+TGG | - | tig0028916:30460-30479 | Msa1439970:intron | 50.0% | |
| GCTGGAACAACTACTGGAGT+GGG | - | tig0028916:30461-30480 | Msa1439970:intron | 50.0% | |
| ! | ATTGAAGGGCCTTCTGAGGA+AGG | - | tig0028916:30485-30504 | Msa1439970:intron | 50.0% |
| TAGCAGGATCCTTCCTCAGA+AGG | + | tig0028916:30497-30516 | None:intergenic | 50.0% | |
| TGGGCTCACTTCCAGTGAAT+GGG | - | tig0028916:30586-30605 | Msa1439970:intron | 50.0% | |
| GGAACCCCTTTGCTTTCATG+GGG | - | tig0028916:30617-30636 | Msa1439970:intron | 50.0% | |
| CTTTCATGGGGTGGCCATAT+AGG | - | tig0028916:30629-30648 | Msa1439970:intron | 50.0% | |
| AACAATATACCTGGGGGTGG+TGG | - | tig0028916:31378-31397 | Msa1439970:CDS | 50.0% | |
| CCTCTAACATGTACCCGTAC+AGG | + | tig0028916:31456-31475 | None:intergenic | 50.0% | |
| CCTGTACGGGTACATGTTAG+AGG | - | tig0028916:31453-31472 | Msa1439970:intron | 50.0% | |
| ! | CATCATTGGCTGCAGACTGA+GGG | + | tig0028916:31596-31615 | None:intergenic | 50.0% |
| ! | TCATCATTGGCTGCAGACTG+AGG | + | tig0028916:31597-31616 | None:intergenic | 50.0% |
| ! | GAAGCACGTGCTGATCACAA+TGG | - | tig0028916:31621-31640 | Msa1439970:intron | 50.0% |
| GATCACAATGGAGACCTGTC+TGG | - | tig0028916:31633-31652 | Msa1439970:intron | 50.0% | |
| AATGGAGACCTGTCTGGAGA+TGG | - | tig0028916:31639-31658 | Msa1439970:intron | 50.0% | |
| CTGTCAATCCATCTCCAGAC+AGG | + | tig0028916:31650-31669 | None:intergenic | 50.0% | |
| CTTAGCCAGGGAGGGAATTA+TGG | - | tig0028916:31681-31700 | Msa1439970:intron | 50.0% | |
| !! | GGGATTGCAAAGTACTGCTG+GGG | - | tig0028916:31746-31765 | Msa1439970:intron | 50.0% |
| !! | GGATTGCAAAGTACTGCTGG+GGG | - | tig0028916:31747-31766 | Msa1439970:intron | 50.0% |
| CAAAGCGAAAAGGGGGGAAA+TGG | + | tig0028916:31890-31909 | None:intergenic | 50.0% | |
| ! | CATTTCCCCCCTTTTCGCTT+TGG | - | tig0028916:31888-31907 | Msa1439970:CDS | 50.0% |
| CTTACCCAAAGCGAAAAGGG+GGG | + | tig0028916:31896-31915 | None:intergenic | 50.0% | |
| CCCACTACAAGCTTCTAGTG+TGG | + | tig0028916:32020-32039 | None:intergenic | 50.0% | |
| GTTAAAGGGGAACAAGAGGG+AGG | + | tig0028916:32216-32235 | None:intergenic | 50.0% | |
| ! | TTTGAGGAAGTGCACAGGCT+TGG | - | tig0028916:32819-32838 | Msa1439970:intron | 50.0% |
| ! | CTTCTGGAGAATGCTTGACC+TGG | + | tig0028916:32851-32870 | None:intergenic | 50.0% |
| CAGTTATCTCTGCCTTCCGA+CGG | + | tig0028916:33147-33166 | None:intergenic | 50.0% | |
| AAAGGTGACTGCACGGTATC+AGG | - | tig0028916:33478-33497 | Msa1439970:CDS | 50.0% | |
| !! | AGTTGACTTGCCCATCCAAG+AGG | - | tig0028916:33595-33614 | Msa1439970:intron | 50.0% |
| !! | GTTGACTTGCCCATCCAAGA+GGG | - | tig0028916:33596-33615 | Msa1439970:intron | 50.0% |
| CCCATCCAAGAGGGAAATGT+TGG | - | tig0028916:33605-33624 | Msa1439970:intron | 50.0% | |
| ! | CCCCATCCTTTAGGAGCTTT+AGG | + | tig0028916:33666-33685 | None:intergenic | 50.0% |
| AAGCTCCTAAAGGATGGGGT+TGG | - | tig0028916:33667-33686 | Msa1439970:intron | 50.0% | |
| AGACGGTGCTCCTATCCAAT+AGG | + | tig0028916:34009-34028 | None:intergenic | 50.0% | |
| ! | TACACACGGCCAGTTTGCTT+TGG | - | tig0028916:34375-34394 | Msa1439970:exon | 50.0% |
| ACGAGACTTGCCGTGGAAAG+TGG | - | tig0028916:28191-28210 | Msa1439970:three_prime_UTR | 55.0% | |
| GGTGAAGGAGGAGGGTTGTT+TGG | + | tig0028916:28333-28352 | None:intergenic | 55.0% | |
| GGTGATAGGGTGAAGGAGGA+GGG | + | tig0028916:28341-28360 | None:intergenic | 55.0% | |
| TGGTGATAGGGTGAAGGAGG+AGG | + | tig0028916:28342-28361 | None:intergenic | 55.0% | |
| !! | CGTTGGTGATAGGGTGAAGG+AGG | + | tig0028916:28345-28364 | None:intergenic | 55.0% |
| !! | CTGCGTTGGTGATAGGGTGA+AGG | + | tig0028916:28348-28367 | None:intergenic | 55.0% |
| !! | GAAGCGCTGCGTTGGTGATA+GGG | + | tig0028916:28354-28373 | None:intergenic | 55.0% |
| GCACGTAATTCAGCGGTGGT+TGG | + | tig0028916:28420-28439 | None:intergenic | 55.0% | |
| ! | GAGAGCACGTAATTCAGCGG+TGG | + | tig0028916:28424-28443 | None:intergenic | 55.0% |
| GGGAGAGGATGAGACGATGA+AGG | + | tig0028916:28548-28567 | None:intergenic | 55.0% | |
| GGAACATGCTTCATGGTCCC+TGG | - | tig0028916:29163-29182 | Msa1439970:intron | 55.0% | |
| !! | GCAGCACTGGCTTCTTTCCA+GGG | + | tig0028916:29183-29202 | None:intergenic | 55.0% |
| !! | AGCAGCACTGGCTTCTTTCC+AGG | + | tig0028916:29184-29203 | None:intergenic | 55.0% |
| CAGGGTCACAATAGCAGCAC+TGG | + | tig0028916:29196-29215 | None:intergenic | 55.0% | |
| CGCTTCCTTTCTCGACCTTC+AGG | - | tig0028916:29326-29345 | Msa1439970:intron | 55.0% | |
| TGGGGCTACCTCTGTCAAAG+TGG | - | tig0028916:29717-29736 | Msa1439970:intron | 55.0% | |
| GGCTACCTCTGTCAAAGTGG+CGG | - | tig0028916:29720-29739 | Msa1439970:intron | 55.0% | |
| CCAGTTCCAGACTCAGAACC+AGG | + | tig0028916:30116-30135 | None:intergenic | 55.0% | |
| !! | CCTGGTTCTGAGTCTGGAAC+TGG | - | tig0028916:30113-30132 | Msa1439970:intron | 55.0% |
| CATGATGTTCTCACCCCGTC+TGG | + | tig0028916:30419-30438 | None:intergenic | 55.0% | |
| !! | GGGTATTGAAGGGCCTTCTG+AGG | - | tig0028916:30481-30500 | Msa1439970:intron | 55.0% |
| GTGGGCTCACTTCCAGTGAA+TGG | - | tig0028916:30585-30604 | Msa1439970:intron | 55.0% | |
| GGGCTCACTTCCAGTGAATG+GGG | - | tig0028916:30587-30606 | Msa1439970:intron | 55.0% | |
| ACCCCTTTGCTTTCATGGGG+TGG | - | tig0028916:30620-30639 | Msa1439970:intron | 55.0% | |
| GCCACCCCATGAAAGCAAAG+GGG | + | tig0028916:30624-30643 | None:intergenic | 55.0% | |
| GGCCACCCCATGAAAGCAAA+GGG | + | tig0028916:30625-30644 | None:intergenic | 55.0% | |
| TGGCCACCCCATGAAAGCAA+AGG | + | tig0028916:30626-30645 | None:intergenic | 55.0% | |
| CAGGTCAAAGCTCATCCCAG+AGG | - | tig0028916:30659-30678 | Msa1439970:intron | 55.0% | |
| GATGGTCTATGGCTGCAGGT+TGG | - | tig0028916:30821-30840 | Msa1439970:CDS | 55.0% | |
| !! | GGTGCTATTGATGGGCTTGC+AGG | - | tig0028916:31474-31493 | Msa1439970:intron | 55.0% |
| !! | TCTCGTGTGCCATTTGGCGT+TGG | - | tig0028916:31558-31577 | Msa1439970:intron | 55.0% |
| ! | AGCTTTAGTCGGGCTTAGCC+AGG | - | tig0028916:31668-31687 | Msa1439970:intron | 55.0% |
| GCTTTAGTCGGGCTTAGCCA+GGG | - | tig0028916:31669-31688 | Msa1439970:intron | 55.0% | |
| ! | GTGTGGTGGAAGAGTGAGCT+GGG | + | tig0028916:32003-32022 | None:intergenic | 55.0% |
| ! | AGTGTGGTGGAAGAGTGAGC+TGG | + | tig0028916:32004-32023 | None:intergenic | 55.0% |
| GGCAGGTGTTCCATGCATTC+AGG | + | tig0028916:32414-32433 | None:intergenic | 55.0% | |
| !! | GAAGTGCACAGGCTTGGTGA+TGG | - | tig0028916:32825-32844 | Msa1439970:intron | 55.0% |
| ATGATGAAGACCCCCAGGGA+CGG | - | tig0028916:33006-33025 | Msa1439970:CDS | 55.0% | |
| AGGTCGCTTGCGTGGTAGTA+AGG | + | tig0028916:33294-33313 | None:intergenic | 55.0% | |
| CGCGTGAAAAGGTGACTGCA+CGG | - | tig0028916:33471-33490 | Msa1439970:CDS | 55.0% | |
| GTTCGCCAACCCCATCCTTT+AGG | + | tig0028916:33675-33694 | None:intergenic | 55.0% | |
| ! | CTATGACCTGCGTCGATGCA+TGG | - | tig0028916:34487-34506 | Msa1439970:five_prime_UTR | 55.0% |
| !! | GGAAGCGCTGCGTTGGTGAT+AGG | + | tig0028916:28355-28374 | None:intergenic | 60.0% |
| !! | TGGGAATGGAAGCGCTGCGT+TGG | + | tig0028916:28362-28381 | None:intergenic | 60.0% |
| CATGTTCGCAGAGGGAAGCG+AGG | + | tig0028916:28455-28474 | None:intergenic | 60.0% | |
| CGAGAAAGGAAGCGGCAGCA+AGG | + | tig0028916:29320-29339 | None:intergenic | 60.0% | |
| ! | CCATGCCGCCACTTTGACAG+AGG | + | tig0028916:29728-29747 | None:intergenic | 60.0% |
| CCTCTGTCAAAGTGGCGGCA+TGG | - | tig0028916:29725-29744 | Msa1439970:intron | 60.0% | |
| TGGCGGCATGGAGTTGAGAG+AGG | - | tig0028916:29737-29756 | Msa1439970:intron | 60.0% | |
| ! | GTTGAGGTGCCTCTTGGTGC+TGG | - | tig0028916:30443-30462 | Msa1439970:intron | 60.0% |
| TTAGTCGGGCTTAGCCAGGG+AGG | - | tig0028916:31672-31691 | Msa1439970:intron | 60.0% | |
| TAGTCGGGCTTAGCCAGGGA+GGG | - | tig0028916:31673-31692 | Msa1439970:intron | 60.0% | |
| ! | ACTGCTGGGGGTGCAAGTAC+TGG | - | tig0028916:31759-31778 | Msa1439970:intron | 60.0% |
| !! | GAAGGGGCGCCAAAGCAAAC+TGG | + | tig0028916:34387-34406 | None:intergenic | 60.0% |
| !! | GGGCTTGCAGGTATTGGCCG+TGG | - | tig0028916:31486-31505 | Msa1439970:intron | 65.0% |
| GTAGGAGGTGAAGCCGCTGC+AGG | + | tig0028916:31525-31544 | None:intergenic | 65.0% | |
| !! | GCTGGGGGTGCAAGTACTGG+TGG | - | tig0028916:31762-31781 | Msa1439970:intron | 65.0% |
| !! | GCACAGGCTTGGTGATGGCC+AGG | - | tig0028916:32830-32849 | Msa1439970:intron | 65.0% |
| ! | ACCAAGGGTGCGCCGTCCCT+GGG | + | tig0028916:33021-33040 | None:intergenic | 70.0% |
| ! | TACCAAGGGTGCGCCGTCCC+TGG | + | tig0028916:33022-33041 | None:intergenic | 70.0% |
| ! | CAAGGGTGCGCCGTCCCTGG+GGG | + | tig0028916:33019-33038 | None:intergenic | 75.0% |
| ! | CCAAGGGTGCGCCGTCCCTG+GGG | + | tig0028916:33020-33039 | None:intergenic | 75.0% |
| ! | CCCCAGGGACGGCGCACCCT+TGG | - | tig0028916:33017-33036 | Msa1439970:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028916 | gene | 28164 | 34531 | 28164 | ID=Msa1439970;Name=Msa1439970 |
| tig0028916 | mRNA | 28164 | 34531 | 28164 | ID=Msa1439970-mRNA-1;Parent=Msa1439970;Name=Msa1439970-mRNA-1;_AED=0.11;_eAED=0.11;_QI=145|1|1|1|0.91|0.84|13|312|864 |
| tig0028916 | exon | 28164 | 28466 | 28164 | ID=Msa1439970-mRNA-1:exon:12046;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 28913 | 29098 | 28913 | ID=Msa1439970-mRNA-1:exon:12045;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 29196 | 29243 | 29196 | ID=Msa1439970-mRNA-1:exon:12044;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 29515 | 29564 | 29515 | ID=Msa1439970-mRNA-1:exon:12043;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 29657 | 29708 | 29657 | ID=Msa1439970-mRNA-1:exon:12042;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 29799 | 29883 | 29799 | ID=Msa1439970-mRNA-1:exon:12041;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 30785 | 31461 | 30785 | ID=Msa1439970-mRNA-1:exon:12040;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 31857 | 32655 | 31857 | ID=Msa1439970-mRNA-1:exon:12039;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 32747 | 32826 | 32747 | ID=Msa1439970-mRNA-1:exon:12038;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 32937 | 33035 | 32937 | ID=Msa1439970-mRNA-1:exon:12037;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 33136 | 33204 | 33136 | ID=Msa1439970-mRNA-1:exon:12036;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 33348 | 33531 | 33348 | ID=Msa1439970-mRNA-1:exon:12035;Parent=Msa1439970-mRNA-1 |
| tig0028916 | exon | 34112 | 34531 | 34112 | ID=Msa1439970-mRNA-1:exon:12034;Parent=Msa1439970-mRNA-1 |
| tig0028916 | five_prime_UTR | 34387 | 34531 | 34387 | ID=Msa1439970-mRNA-1:five_prime_utr;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 34112 | 34386 | 34112 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 33348 | 33531 | 33348 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 33136 | 33204 | 33136 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 32937 | 33035 | 32937 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 32747 | 32826 | 32747 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 31857 | 32655 | 31857 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 30785 | 31461 | 30785 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 29799 | 29883 | 29799 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 29657 | 29708 | 29657 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 29515 | 29564 | 29515 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 29196 | 29243 | 29196 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | CDS | 28922 | 29098 | 28922 | ID=Msa1439970-mRNA-1:cds;Parent=Msa1439970-mRNA-1 |
| tig0028916 | three_prime_UTR | 28913 | 28921 | 28913 | ID=Msa1439970-mRNA-1:three_prime_utr;Parent=Msa1439970-mRNA-1 |
| tig0028916 | three_prime_UTR | 28164 | 28466 | 28164 | ID=Msa1439970-mRNA-1:three_prime_utr;Parent=Msa1439970-mRNA-1 |
| Gene Sequence |
| Protein sequence |