Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440640 | sp|Q9ZNX6|GSH1_MEDTR | 71.064 | 470 | 80 | 3 | 14 | 483 | 95 | 508 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440640 | A0A411D308 | 72.766 | 470 | 72 | 3 | 14 | 483 | 95 | 508 | 0.0 | 675 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1327490 | Msa1440640 | 0.808338 | 3.252969e-50 | -8.615850e-47 |
| Msa1192850 | Msa1440640 | 0.807369 | 5.228283e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440640 | MtrunA17_Chr8g0386791 | 71.064 | 470 | 80 | 3 | 14 | 483 | 95 | 508 | 0.0 | 665 |
| Msa1440640 | MtrunA17_Chr5g0397471 | 68.056 | 216 | 69 | 0 | 14 | 229 | 99 | 314 | 2.21e-100 | 310 |
| Msa1440640 | MtrunA17_Chr5g0397471 | 66.162 | 198 | 67 | 0 | 286 | 483 | 315 | 512 | 8.99e-92 | 288 |
| Msa1440640 | MtrunA17_Chr5g0397441 | 63.030 | 165 | 61 | 0 | 319 | 483 | 1 | 165 | 3.85e-68 | 215 |
| Msa1440640 | MtrunA17_Chr5g0397431 | 60.656 | 122 | 48 | 0 | 108 | 229 | 1 | 122 | 1.09e-49 | 166 |
| Msa1440640 | MtrunA17_Chr5g0397421 | 75.000 | 88 | 22 | 0 | 14 | 101 | 10 | 97 | 1.51e-43 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440640 | AT4G23100.3 | 66.242 | 471 | 103 | 3 | 13 | 483 | 108 | 522 | 0.0 | 627 |
| Msa1440640 | AT4G23100.1 | 66.242 | 471 | 103 | 3 | 13 | 483 | 108 | 522 | 0.0 | 627 |
| Msa1440640 | AT4G23100.2 | 65.155 | 419 | 90 | 3 | 13 | 431 | 108 | 470 | 0.0 | 548 |
Find 137 sgRNAs with CRISPR-Local
Find 692 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCTAAAGTTGGTTCTTC+TGG | 0.090848 | tig0029096:-7064 | Msa1440640:CDS |
| AATTCTTATTCTACCCAAAA+AGG | 0.169231 | tig0029096:+1484 | None:intergenic |
| TTCGAAGAATTGCTTTATTA+AGG | 0.211451 | tig0029096:-1567 | Msa1440640:exon |
| TATGCGCTTTACCGGCATTT+TGG | 0.216829 | tig0029096:-3574 | Msa1440640:CDS |
| CACTCCAGCTGAGAGGCTTT+TGG | 0.263032 | tig0029096:-1631 | Msa1440640:CDS |
| TGCCTAAAGTTGGTTCTTCT+GGG | 0.295380 | tig0029096:-7063 | Msa1440640:CDS |
| GATCTCTTTACAAAGTGTTT+TGG | 0.300868 | tig0029096:-3261 | Msa1440640:CDS |
| GGAGATCCGGTGGTGGTACC+TGG | 0.303275 | tig0029096:+5689 | None:intergenic |
| CAGAAGTTTATGCGCTTTAC+CGG | 0.314920 | tig0029096:-3582 | Msa1440640:CDS |
| CTCTGGTAGGTTACTGTAAC+TGG | 0.316102 | tig0029096:-2654 | Msa1440640:intron |
| ACTATTTGCTCATACTTCAT+AGG | 0.317372 | tig0029096:+9924 | None:intergenic |
| GGTACTGAACATGAAAAGTT+TGG | 0.346564 | tig0029096:-9969 | Msa1440640:CDS |
| CATTCCAGGTCAGATTAAAA+AGG | 0.353247 | tig0029096:-3640 | Msa1440640:intron |
| TAACATTTGTCTTTCTTCAA+TGG | 0.366008 | tig0029096:+3220 | None:intergenic |
| TTGAAGAAAGACAAATGTTA+AGG | 0.367809 | tig0029096:-3217 | Msa1440640:CDS |
| CTTGGAAAGAAGAGGCTTCA+TGG | 0.367965 | tig0029096:-2115 | Msa1440640:CDS |
| TAAAGCTGTTGCTGAGGAAA+TGG | 0.367989 | tig0029096:-7279 | Msa1440640:CDS |
| AATTACCAACTCTTAATGAT+TGG | 0.370422 | tig0029096:-3796 | Msa1440640:CDS |
| ATGCAAAACTTACTTGATAA+AGG | 0.374051 | tig0029096:+9637 | None:intergenic |
| ATTACCAACTCTTAATGATT+GGG | 0.376584 | tig0029096:-3795 | Msa1440640:CDS |
| GTAACAAACAATCTCCAGTT+TGG | 0.376817 | tig0029096:+5542 | None:intergenic |
| CTTTGAGTCCTGACTTTGGC+TGG | 0.382474 | tig0029096:+7231 | None:intergenic |
| GGAAAGCTTCCTCGTATTCC+TGG | 0.383510 | tig0029096:-3821 | Msa1440640:CDS |
| AAGACAAATGTTAAGGGATA+AGG | 0.386034 | tig0029096:-3210 | Msa1440640:intron |
| TTTATCCCAGCCAAATCTTT+CGG | 0.386381 | tig0029096:+9881 | None:intergenic |
| AATGGCATTGCCGAAAGATT+TGG | 0.387556 | tig0029096:-9891 | Msa1440640:CDS |
| CGTCCTCCTCCTTCCCAAAC+TGG | 0.392379 | tig0029096:-5556 | Msa1440640:CDS |
| GTCAGTTGTGCGCGGAGATC+CGG | 0.395661 | tig0029096:+5676 | None:intergenic |
| GGAAGGAGGAGGACGGCGTT+CGG | 0.407791 | tig0029096:+5564 | None:intergenic |
| TTAAGGTGTATTTAGCTGCT+TGG | 0.412230 | tig0029096:-1550 | Msa1440640:exon |
| GTACAACGGGTGAGAGAGAA+AGG | 0.417597 | tig0029096:+5633 | None:intergenic |
| TGGAATTGTATCATGGAAAG+TGG | 0.417984 | tig0029096:-1611 | Msa1440640:CDS |
| GAGATGCTTGTAGATATATA+TGG | 0.421897 | tig0029096:-1420 | Msa1440640:three_prime_UTR |
| GTTGCTGAGGAAATGGGAAT+TGG | 0.427076 | tig0029096:-7272 | Msa1440640:CDS |
| TTAATATCTAAAGGATGGCT+TGG | 0.437702 | tig0029096:-2133 | Msa1440640:intron |
| GTTCTGAAGCTGACATGATC+AGG | 0.438098 | tig0029096:-6913 | Msa1440640:CDS |
| TTTCATCATAAGTCTGATGC+AGG | 0.446676 | tig0029096:+9670 | None:intergenic |
| TGAAGAAAGACAAATGTTAA+GGG | 0.452429 | tig0029096:-3216 | Msa1440640:CDS |
| GTAGCTGAGGTGGCCAGAAC+AGG | 0.453179 | tig0029096:-2072 | Msa1440640:intron |
| GGTGAGAGAGAAAGGGAGAA+GGG | 0.454723 | tig0029096:+5641 | None:intergenic |
| GGTGGTCAGCTTGAACTTAG+TGG | 0.461442 | tig0029096:-9708 | Msa1440640:CDS |
| CTGTACTGGAATGAGCTTCA+AGG | 0.462322 | tig0029096:-3960 | Msa1440640:intron |
| TAACAAACAATCTCCAGTTT+GGG | 0.467926 | tig0029096:+5543 | None:intergenic |
| CTCCTACTGACAAACCCATT+GGG | 0.471135 | tig0029096:+6728 | None:intergenic |
| TCACAGATGGGAAGCCCAAT+GGG | 0.472526 | tig0029096:-6742 | Msa1440640:CDS |
| AAGAATTGTTTGTAAAACAT+TGG | 0.480062 | tig0029096:-1468 | Msa1440640:three_prime_UTR |
| AAAGCGCATAAACTTCTGAT+AGG | 0.488091 | tig0029096:+3587 | None:intergenic |
| ATAGGTTTCCAGCCAAAGTC+AGG | 0.488357 | tig0029096:-7239 | Msa1440640:CDS |
| TAAACCAACTTGGGTTGGTA+TGG | 0.489219 | tig0029096:-1395 | Msa1440640:three_prime_UTR |
| AGAACATGAGCAGGTACAAC+GGG | 0.489303 | tig0029096:+5620 | None:intergenic |
| AAAAGGCAGCATGCCTGTGC+GGG | 0.490602 | tig0029096:+6583 | None:intergenic |
| ACCCCAGAAGAACCAACTTT+AGG | 0.493141 | tig0029096:+7061 | None:intergenic |
| GCAAATTCACCCTTCACAGA+TGG | 0.493911 | tig0029096:-6755 | Msa1440640:CDS |
| AAAGAATCATCGAAAACAAA+AGG | 0.495048 | tig0029096:+6566 | None:intergenic |
| CAAATTCACCCTTCACAGAT+GGG | 0.509173 | tig0029096:-6754 | Msa1440640:CDS |
| AATTCCAAAAGCCTCTCAGC+TGG | 0.510828 | tig0029096:+1627 | None:intergenic |
| TTCTTACAGGCTGCAAACTT+AGG | 0.511542 | tig0029096:+6876 | None:intergenic |
| GAGAGAGAAAGGGAGAAGGG+TGG | 0.512940 | tig0029096:+5644 | None:intergenic |
| ATTGGGCTTCCCATCTGTGA+AGG | 0.514980 | tig0029096:+6745 | None:intergenic |
| AAAGCTGTTGCTGAGGAAAT+GGG | 0.518116 | tig0029096:-7278 | Msa1440640:CDS |
| CAATCTCCAGTTTGGGAAGG+AGG | 0.521064 | tig0029096:+5550 | None:intergenic |
| TCTCCTACTGACAAACCCAT+TGG | 0.524091 | tig0029096:+6727 | None:intergenic |
| ATGTCTTTGAGTCCTGACTT+TGG | 0.525689 | tig0029096:+7227 | None:intergenic |
| TTCACAGATGGGAAGCCCAA+TGG | 0.532636 | tig0029096:-6743 | Msa1440640:CDS |
| GAGATCCGGTGGTGGTACCT+GGG | 0.533330 | tig0029096:+5690 | None:intergenic |
| GCTGAAGCATGTTGCTGAAG+AGG | 0.534645 | tig0029096:-2604 | Msa1440640:CDS |
| TGGCTGGGATAAAGTAATGG+AGG | 0.540441 | tig0029096:-9871 | Msa1440640:CDS |
| GCCTAAAGTTGGTTCTTCTG+GGG | 0.540984 | tig0029096:-7062 | Msa1440640:CDS |
| AAACTTGAAACAGTCATGGT+TGG | 0.542687 | tig0029096:-6622 | Msa1440640:intron |
| TGGAATAAACCAACTTGGGT+TGG | 0.542951 | tig0029096:-1400 | Msa1440640:three_prime_UTR |
| GGGGCTTCAAAACATATCAC+TGG | 0.548280 | tig0029096:-9736 | Msa1440640:CDS |
| CATTGCCGAAAGATTTGGCT+GGG | 0.550972 | tig0029096:-9886 | Msa1440640:CDS |
| GGGTGAGAGAGAAAGGGAGA+AGG | 0.551805 | tig0029096:+5640 | None:intergenic |
| GGAATTGTATCATGGAAAGT+GGG | 0.552480 | tig0029096:-1610 | Msa1440640:CDS |
| TTTAAATGAAGTAGCTGAGG+TGG | 0.553015 | tig0029096:-2082 | Msa1440640:CDS |
| AACCAGGACATGTACTGTAC+AGG | 0.553592 | tig0029096:-7029 | Msa1440640:intron |
| AATTAGATTCGTGTGCGTGA+GGG | 0.553738 | tig0029096:+5597 | None:intergenic |
| AAAGTTGACAAGACCCGCAC+AGG | 0.555019 | tig0029096:-6596 | Msa1440640:CDS |
| ATATATGGAATAAACCAACT+TGG | 0.556021 | tig0029096:-1405 | Msa1440640:three_prime_UTR |
| CAAATAGTAGAACTGTTGAA+TGG | 0.557203 | tig0029096:-9909 | Msa1440640:CDS |
| AACCTCCCAGGTACCACCAC+CGG | 0.559440 | tig0029096:-5695 | Msa1440640:CDS |
| TTGGGCTTCCCATCTGTGAA+GGG | 0.563474 | tig0029096:+6746 | None:intergenic |
| TTAAGAGTTGGTAATTCACC+AGG | 0.563519 | tig0029096:+3803 | None:intergenic |
| CACCTGTACAGTACATGTCC+TGG | 0.563533 | tig0029096:+7027 | None:intergenic |
| AAAACTACCCTTGGTATCGT+AGG | 0.564207 | tig0029096:+7203 | None:intergenic |
| GCATTGCCGAAAGATTTGGC+TGG | 0.564207 | tig0029096:-9887 | Msa1440640:CDS |
| ACCACCATACCAACCCAAGT+TGG | 0.564801 | tig0029096:+1391 | None:intergenic |
| TTTCTTTCAAGTTTATGTGG+GGG | 0.572612 | tig0029096:-1526 | Msa1440640:three_prime_UTR |
| TTCATCATAAGTCTGATGCA+GGG | 0.572949 | tig0029096:+9671 | None:intergenic |
| ATAGGTTAAAGCTGTTGCTG+AGG | 0.574248 | tig0029096:-7285 | Msa1440640:intron |
| AAATTAGATTCGTGTGCGTG+AGG | 0.578425 | tig0029096:+5596 | None:intergenic |
| GGCTGGGATAAAGTAATGGA+GGG | 0.581391 | tig0029096:-9870 | Msa1440640:CDS |
| TATATGGAATAAACCAACTT+GGG | 0.581735 | tig0029096:-1404 | Msa1440640:three_prime_UTR |
| ATTTGGCTGGGATAAAGTAA+TGG | 0.583217 | tig0029096:-9874 | Msa1440640:CDS |
| TTACCAACTCTTAATGATTG+GGG | 0.584376 | tig0029096:-3794 | Msa1440640:CDS |
| CCGCCACTTACCCAAAATGC+CGG | 0.585206 | tig0029096:+3563 | None:intergenic |
| CAAAAGGCAGCATGCCTGTG+CGG | 0.586460 | tig0029096:+6582 | None:intergenic |
| ATCTCCGCGCACAACTGACA+CGG | 0.590243 | tig0029096:-5672 | Msa1440640:CDS |
| CAAAACATATCACTGGAGGC+AGG | 0.590783 | tig0029096:-9729 | Msa1440640:CDS |
| ACCGCTGGCAGCAACCTCCC+AGG | 0.591014 | tig0029096:-5707 | Msa1440640:intron |
| ATGGAGATGAGAGGTGCTGA+CGG | 0.591982 | tig0029096:-3614 | Msa1440640:CDS |
| CAGTTTGGGAAGGAGGAGGA+CGG | 0.593418 | tig0029096:+5557 | None:intergenic |
| AGCCCAATGGGTTTGTCAGT+AGG | 0.597053 | tig0029096:-6730 | Msa1440640:CDS |
| TGAGGGAGTCTACAATGGGT+TGG | 0.598832 | tig0029096:-11891 | None:intergenic |
| GTCTGATGCAGGGTTTCAAG+AGG | 0.601944 | tig0029096:+9681 | None:intergenic |
| TGTGCGCGGAGATCCGGTGG+TGG | 0.601980 | tig0029096:+5682 | None:intergenic |
| AAGGATGGCTTGGAAAGAAG+AGG | 0.604330 | tig0029096:-2123 | Msa1440640:CDS |
| TTCAGCAAACCACCTCGGAA+TGG | 0.604865 | tig0029096:+2621 | None:intergenic |
| TAGCCCCAATCATTAAGAGT+TGG | 0.607903 | tig0029096:+3791 | None:intergenic |
| CTGGGGTTGACGTAATAACC+AGG | 0.610466 | tig0029096:-7045 | Msa1440640:CDS |
| CTGATGCAGGGTTTCAAGAG+GGG | 0.610643 | tig0029096:+9683 | None:intergenic |
| TTTGACCACATTATATCCTG+AGG | 0.610946 | tig0029096:-3765 | Msa1440640:intron |
| CAGGTGTCACTCCAGCTGAG+AGG | 0.611225 | tig0029096:-1638 | Msa1440640:CDS |
| TACAACGGGTGAGAGAGAAA+GGG | 0.611881 | tig0029096:+5634 | None:intergenic |
| TCTGATGCAGGGTTTCAAGA+GGG | 0.613213 | tig0029096:+9682 | None:intergenic |
| TCTCCAGTTTGGGAAGGAGG+AGG | 0.615409 | tig0029096:+5553 | None:intergenic |
| ATGGGTTTGTCAGTAGGAGA+AGG | 0.615561 | tig0029096:-6724 | Msa1440640:intron |
| ACCAACTTGGGTTGGTATGG+TGG | 0.618535 | tig0029096:-1392 | None:intergenic |
| AGGAGGAGGACGGCGTTCGG+CGG | 0.619552 | tig0029096:+5567 | None:intergenic |
| GCGTGAGGGAGAACATGAGC+AGG | 0.631518 | tig0029096:+5611 | None:intergenic |
| AGAGGTTATAAAGCTAGCAA+AGG | 0.634513 | tig0029096:-2586 | Msa1440640:intron |
| AAACAATCTCCAGTTTGGGA+AGG | 0.636726 | tig0029096:+5547 | None:intergenic |
| AAAAGGTATATGGAGATGAG+AGG | 0.637716 | tig0029096:-3623 | Msa1440640:CDS |
| ATCCGGTGGTGGTACCTGGG+AGG | 0.647644 | tig0029096:+5693 | None:intergenic |
| GAGAACATGAGCAGGTACAA+CGG | 0.649781 | tig0029096:+5619 | None:intergenic |
| AAGACATGCCTACGATACCA+AGG | 0.655340 | tig0029096:-7211 | Msa1440640:CDS |
| TTTCTCATAGTCAAACGTGA+TGG | 0.656128 | tig0029096:+11867 | None:intergenic |
| ACAAACCTCAGGATATAATG+TGG | 0.659223 | tig0029096:+3760 | None:intergenic |
| GGTAATTCACCAGGAATACG+AGG | 0.670880 | tig0029096:+3812 | None:intergenic |
| AACATATCACTGGAGGCAGG+TGG | 0.671941 | tig0029096:-9726 | Msa1440640:CDS |
| CATGCTTCAGCAAACCACCT+CGG | 0.684854 | tig0029096:+2616 | None:intergenic |
| GCTTCAAAACATATCACTGG+AGG | 0.685586 | tig0029096:-9733 | Msa1440640:CDS |
| GAGATGAGAGGTGCTGACGG+AGG | 0.690542 | tig0029096:-3611 | Msa1440640:CDS |
| AGACATGCCTACGATACCAA+GGG | 0.695790 | tig0029096:-7210 | Msa1440640:intron |
| GGTCTAAAGACACCATTCCG+AGG | 0.701711 | tig0029096:-2633 | Msa1440640:CDS |
| CTAAAGACACCATTCCGAGG+TGG | 0.706851 | tig0029096:-2630 | Msa1440640:CDS |
| GCGTCCGTGTCAGTTGTGCG+CGG | 0.721678 | tig0029096:+5668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAGAAAAAAAAAAATA+AGG | - | tig0029096:1756-1775 | Msa1440640:intron | 10.0% |
| !!! | TTTCAATAAATCTAATATTT+TGG | + | tig0029096:1881-1900 | None:intergenic | 10.0% |
| !! | TCATTTAACTATTAATTTAA+AGG | - | tig0029096:3118-3137 | Msa1440640:intron | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | tig0029096:3816-3835 | None:intergenic | 10.0% |
| !! | GTCAATATTATTTATATTTA+TGG | + | tig0029096:3882-3901 | None:intergenic | 10.0% |
| !!! | TTATTTTAGTTAACATTAAT+TGG | - | tig0029096:4044-4063 | Msa1440640:intron | 10.0% |
| !!! | TATTTTAGTTAACATTAATT+GGG | - | tig0029096:4045-4064 | Msa1440640:intron | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | tig0029096:5300-5319 | Msa1440640:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | tig0029096:5301-5320 | Msa1440640:intron | 10.0% |
| !! | ATTATATTAATATGTATATG+CGG | + | tig0029096:5525-5544 | None:intergenic | 10.0% |
| !!! | TATTGTATTAAGTAATTTTT+TGG | + | tig0029096:5620-5639 | None:intergenic | 10.0% |
| !! | ACTAAATAATTAATATTTCA+AGG | - | tig0029096:5698-5717 | Msa1440640:CDS | 10.0% |
| !!! | TTTATGTATTCTTTTTATTA+AGG | - | tig0029096:6429-6448 | Msa1440640:intron | 10.0% |
| !!! | TTATGTATTCTTTTTATTAA+GGG | - | tig0029096:6430-6449 | Msa1440640:intron | 10.0% |
| !! | ATGAAATTTAATTAAGAAAA+GGG | - | tig0029096:10255-10274 | Msa1440640:intron | 10.0% |
| !! | TAACTATTAATTTAAAGGTT+TGG | - | tig0029096:3123-3142 | Msa1440640:intron | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | tig0029096:5016-5035 | None:intergenic | 15.0% |
| !!! | TAATAAGATAATAATTTTCC+TGG | + | tig0029096:5349-5368 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | tig0029096:5377-5396 | Msa1440640:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | tig0029096:5415-5434 | None:intergenic | 15.0% |
| !! | AAACTCTTTAAATTATAACT+CGG | + | tig0029096:5453-5472 | None:intergenic | 15.0% |
| !! | TTATATTAATATGTATATGC+GGG | + | tig0029096:5524-5543 | None:intergenic | 15.0% |
| !!! | ATTAAGTAATTTTTTGGTTT+AGG | + | tig0029096:5614-5633 | None:intergenic | 15.0% |
| !!! | TTATAACTGTTTTTTCTTTT+CGG | + | tig0029096:5732-5751 | None:intergenic | 15.0% |
| !! | AAGAAAAAACAGTTATAAAA+TGG | - | tig0029096:5734-5753 | Msa1440640:intron | 15.0% |
| !! | TTAAAAAGAAAATTGAAGAA+GGG | + | tig0029096:5785-5804 | None:intergenic | 15.0% |
| !! | TTTAAAAAGAAAATTGAAGA+AGG | + | tig0029096:5786-5805 | None:intergenic | 15.0% |
| !!! | TATGTATTCTTTTTATTAAG+GGG | - | tig0029096:6431-6450 | Msa1440640:intron | 15.0% |
| !! | AAAAAAAAATTATTGGATTC+AGG | + | tig0029096:7844-7863 | None:intergenic | 15.0% |
| !! | AACACACAAAAAAAAATTAT+TGG | + | tig0029096:7851-7870 | None:intergenic | 15.0% |
| !!! | TAAGAAAATTAGTTTAATCT+GGG | + | tig0029096:7989-8008 | None:intergenic | 15.0% |
| !! | ACATTATATCAATGATTAAT+TGG | + | tig0029096:8982-9001 | None:intergenic | 15.0% |
| !! | ATAACAACAATATTAAAGAT+AGG | + | tig0029096:9344-9363 | None:intergenic | 15.0% |
| !!! | TTTAATATTGTTGTTATCAT+AGG | - | tig0029096:9347-9366 | Msa1440640:intron | 15.0% |
| !! | ACAATAAAATATACATTTGA+TGG | + | tig0029096:9373-9392 | None:intergenic | 15.0% |
| !!! | TGATTATTTTTTGTTTTTGT+AGG | - | tig0029096:9417-9436 | Msa1440640:intron | 15.0% |
| !! | CATGAAATTTAATTAAGAAA+AGG | - | tig0029096:10254-10273 | Msa1440640:intron | 15.0% |
| !! | TGAAATTTAATTAAGAAAAG+GGG | - | tig0029096:10256-10275 | Msa1440640:intron | 15.0% |
| !! | TGTAAATAATTTAAACTTTC+AGG | + | tig0029096:10344-10363 | None:intergenic | 15.0% |
| !! | TTAACTTCATTAATATCTAA+AGG | - | tig0029096:11130-11149 | Msa1440640:intron | 15.0% |
| !!! | TAAAATTTTAGATGGAGTTT+TGG | + | tig0029096:2494-2513 | None:intergenic | 20.0% |
| !!! | GTGTTACTTAAAATTTTAGA+TGG | + | tig0029096:2502-2521 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTCATAAAGTAC+CGG | - | tig0029096:3211-3230 | Msa1440640:CDS | 20.0% |
| !! | TTAAAAATCAAGATACGATA+CGG | - | tig0029096:3737-3756 | Msa1440640:intron | 20.0% |
| !!! | GTTAGAACTTTATTTTGTAA+AGG | - | tig0029096:4506-4525 | Msa1440640:intron | 20.0% |
| !! | CTGTACATATTTAAATTTGT+GGG | + | tig0029096:4963-4982 | None:intergenic | 20.0% |
| !! | ACTGTACATATTTAAATTTG+TGG | + | tig0029096:4964-4983 | None:intergenic | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | tig0029096:4989-5008 | Msa1440640:intron | 20.0% |
| !! | TATATTAATATGTATATGCG+GGG | + | tig0029096:5523-5542 | None:intergenic | 20.0% |
| !!! | TAATTTTTTGGTTTAGGTTT+AGG | + | tig0029096:5608-5627 | None:intergenic | 20.0% |
| !!! | TATAACTGTTTTTTCTTTTC+GGG | + | tig0029096:5731-5750 | None:intergenic | 20.0% |
| !! | TAAAAAGAAAATTGAAGAAG+GGG | + | tig0029096:5784-5803 | None:intergenic | 20.0% |
| !! | CATATCTTAAAGAAATATCT+TGG | + | tig0029096:5936-5955 | None:intergenic | 20.0% |
| !! | GCATTTATATCTGTATTTAT+AGG | - | tig0029096:5969-5988 | Msa1440640:intron | 20.0% |
| !! | AAAAAAAAAAAAACTACCCT+TGG | + | tig0029096:6081-6100 | None:intergenic | 20.0% |
| !! | AAAATATCAATGTTTCTTAC+AGG | + | tig0029096:6412-6431 | None:intergenic | 20.0% |
| !! | TTAATAAATCAAAGTTAGAG+AGG | + | tig0029096:6609-6628 | None:intergenic | 20.0% |
| !!! | TCTCTAACTTTGATTTATTA+AGG | - | tig0029096:6608-6627 | Msa1440640:CDS | 20.0% |
| !!! | AATAACTTAGAGTTTTTCAT+TGG | + | tig0029096:7066-7085 | None:intergenic | 20.0% |
| !! | AATGAAAAATTCAAAGGAAA+AGG | + | tig0029096:7273-7292 | None:intergenic | 20.0% |
| !! | TGAGTTAATGAAAAATTCAA+AGG | + | tig0029096:7279-7298 | None:intergenic | 20.0% |
| !! | TGTCTATTCTTAAACATAAT+TGG | - | tig0029096:7922-7941 | Msa1440640:intron | 20.0% |
| !!! | CTAAGAAAATTAGTTTAATC+TGG | + | tig0029096:7990-8009 | None:intergenic | 20.0% |
| !! | TAAACATTGTGTCTATTATT+AGG | - | tig0029096:8054-8073 | Msa1440640:intron | 20.0% |
| !! | CTAAAAGATATAAGTGTAAT+CGG | - | tig0029096:8219-8238 | Msa1440640:intron | 20.0% |
| !! | AATTGTGATAACAGATTTAT+AGG | - | tig0029096:8878-8897 | Msa1440640:intron | 20.0% |
| !! | TCTATCTTTATAACAACTTA+TGG | - | tig0029096:9807-9826 | Msa1440640:intron | 20.0% |
| !! | GAAGAATATGCAAAAATAAA+AGG | + | tig0029096:9913-9932 | None:intergenic | 20.0% |
| !! | TACAAATGAAAAATATTGCA+AGG | + | tig0029096:10094-10113 | None:intergenic | 20.0% |
| !!! | TCAAAAGAAAAACTATTTCT+GGG | + | tig0029096:10154-10173 | None:intergenic | 20.0% |
| !! | ATCAAAAGAAAAACTATTTC+TGG | + | tig0029096:10155-10174 | None:intergenic | 20.0% |
| !! | CTTAATTAAATTTCATGACA+AGG | + | tig0029096:10251-10270 | None:intergenic | 20.0% |
| !! | AAATAATTTAAACTTTCAGG+TGG | + | tig0029096:10341-10360 | None:intergenic | 20.0% |
| !! | AAGTAAAATTTGAAAGAGTT+CGG | + | tig0029096:10388-10407 | None:intergenic | 20.0% |
| !!! | TCTTTCAAATTTTACTTGTT+AGG | - | tig0029096:10391-10410 | Msa1440640:intron | 20.0% |
| !!! | AAATTGTAAAAGTCTTTTGA+CGG | + | tig0029096:11000-11019 | None:intergenic | 20.0% |
| !!! | CATTGATTATAAATTGACTA+AGG | + | tig0029096:11090-11109 | None:intergenic | 20.0% |
| !! | AAATTAACTAATGCAATCAT+AGG | - | tig0029096:11553-11572 | Msa1440640:intron | 20.0% |
| !! | AAGAATTGTTTGTAAAACAT+TGG | - | tig0029096:11804-11823 | Msa1440640:intron | 20.0% |
| ! | GCTTAAAATCTTAAGACATT+AGG | - | tig0029096:1458-1477 | Msa1440640:three_prime_UTR | 25.0% |
| ! | TTGAAGAAGTTGAATATTAC+TGG | - | tig0029096:1843-1862 | Msa1440640:intron | 25.0% |
| ! | TGAAGAAGTTGAATATTACT+GGG | - | tig0029096:1844-1863 | Msa1440640:intron | 25.0% |
| ! | ATTTCAAATTCCTTCACTTA+TGG | + | tig0029096:1995-2014 | None:intergenic | 25.0% |
| !! | TTAAGACTTTGAAAGAAGAT+AGG | + | tig0029096:2202-2221 | None:intergenic | 25.0% |
| ! | TATCTTCTTTCAAAGTCTTA+AGG | - | tig0029096:2201-2220 | Msa1440640:intron | 25.0% |
| ! | TAGAATGTCGTTATATTTGA+TGG | + | tig0029096:2547-2566 | None:intergenic | 25.0% |
| ! | GTTAATCATGCTTGAATTAA+TGG | + | tig0029096:2603-2622 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCATAAAGTACC+GGG | - | tig0029096:3212-3231 | Msa1440640:CDS | 25.0% |
| ! | AAAAATTATTGGACTCAAAC+AGG | - | tig0029096:3428-3447 | Msa1440640:intron | 25.0% |
| ! | GCAAAAAAAATTACAGTCAA+GGG | + | tig0029096:3493-3512 | None:intergenic | 25.0% |
| ! | TGCAAAAAAAATTACAGTCA+AGG | + | tig0029096:3494-3513 | None:intergenic | 25.0% |
| ! | ATGTGTATATTATGTGAATC+AGG | - | tig0029096:3515-3534 | Msa1440640:intron | 25.0% |
| ! | TGTGTATATTATGTGAATCA+GGG | - | tig0029096:3516-3535 | Msa1440640:intron | 25.0% |
| ! | ATGCAAAACTTACTTGATAA+AGG | + | tig0029096:3638-3657 | None:intergenic | 25.0% |
| !!! | TGAGTATAATGCTTCTTTTT+TGG | + | tig0029096:4015-4034 | None:intergenic | 25.0% |
| !! | TAACATTAATTGGGAAGTAT+TGG | - | tig0029096:4054-4073 | Msa1440640:intron | 25.0% |
| !!! | AACATTAATTGGGAAGTATT+GGG | - | tig0029096:4055-4074 | Msa1440640:intron | 25.0% |
| !!! | TCATTAGTATTTTTTGCGAA+AGG | - | tig0029096:4664-4683 | Msa1440640:intron | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | tig0029096:4994-5013 | Msa1440640:intron | 25.0% |
| ! | TTAAAGAGTTTCTACTGTAT+TGG | - | tig0029096:5462-5481 | Msa1440640:intron | 25.0% |
| ! | ACTAAATGTCAAAAAAGAAG+AGG | + | tig0029096:6116-6135 | None:intergenic | 25.0% |
| !!! | TCTTCTTTTTTGACATTTAG+TGG | - | tig0029096:6115-6134 | Msa1440640:intron | 25.0% |
| ! | AAAAATTACTTGCCTAAAGT+TGG | - | tig0029096:6199-6218 | Msa1440640:intron | 25.0% |
| !! | TCATTGTTGTAAACTTTTAC+AGG | - | tig0029096:6321-6340 | Msa1440640:intron | 25.0% |
| !!! | TGTTTCAAGTTTCAGAAAAT+GGG | + | tig0029096:6642-6661 | None:intergenic | 25.0% |
| ! | AAAGAATCATCGAAAACAAA+AGG | + | tig0029096:6709-6728 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCGATGATTCTTT+CGG | - | tig0029096:6709-6728 | Msa1440640:intron | 25.0% |
| ! | TAAAGAACGTAAAAGAGATT+AGG | - | tig0029096:6858-6877 | Msa1440640:intron | 25.0% |
| ! | AAAGAACGTAAAAGAGATTA+GGG | - | tig0029096:6859-6878 | Msa1440640:intron | 25.0% |
| ! | AATTGCAAAATCATCTCTAA+TGG | + | tig0029096:6981-7000 | None:intergenic | 25.0% |
| !! | AATTGAAGATTTGATGACTT+TGG | + | tig0029096:7123-7142 | None:intergenic | 25.0% |
| ! | AAAATTCAAAGGAAAAGGAT+AGG | + | tig0029096:7268-7287 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTTTAAGTCCAG+GGG | + | tig0029096:7392-7411 | None:intergenic | 25.0% |
| !!! | GTGTATTTTTTTTAAGTCCA+GGG | + | tig0029096:7393-7412 | None:intergenic | 25.0% |
| !! | GTTCATTTTGCAAAATCATA+TGG | + | tig0029096:7422-7441 | None:intergenic | 25.0% |
| !!! | ACAATATCATGATTTGGTTT+AGG | + | tig0029096:7817-7836 | None:intergenic | 25.0% |
| !! | CGATTACACTTATATCTTTT+AGG | + | tig0029096:8221-8240 | None:intergenic | 25.0% |
| !!! | TGTTGATGTTTTGTTGTTAT+AGG | - | tig0029096:8387-8406 | Msa1440640:intron | 25.0% |
| ! | AATTAGAATGCGTAACTAAT+GGG | - | tig0029096:8514-8533 | Msa1440640:intron | 25.0% |
| ! | TCAATAATCATTGTAGAGAT+AGG | + | tig0029096:8642-8661 | None:intergenic | 25.0% |
| ! | TCAATAATGAGAAATAAGTG+TGG | - | tig0029096:8720-8739 | Msa1440640:intron | 25.0% |
| ! | TTTCAAAAACAAAATCTGGA+AGG | - | tig0029096:8846-8865 | Msa1440640:intron | 25.0% |
| ! | ATTACTTTGTATTTAAGCGT+GGG | + | tig0029096:9024-9043 | None:intergenic | 25.0% |
| ! | ACGCTTAAATACAAAGTAAT+GGG | - | tig0029096:9024-9043 | Msa1440640:intron | 25.0% |
| ! | ATTCAGATTTGAATAAATGC+GGG | + | tig0029096:9068-9087 | None:intergenic | 25.0% |
| ! | CATTCAGATTTGAATAAATG+CGG | + | tig0029096:9069-9088 | None:intergenic | 25.0% |
| ! | TTACCTCATGAATATAGTTA+TGG | - | tig0029096:9115-9134 | Msa1440640:intron | 25.0% |
| ! | AATTAACCGTGAAGAATTAT+GGG | + | tig0029096:9180-9199 | None:intergenic | 25.0% |
| ! | AAATTAACCGTGAAGAATTA+TGG | + | tig0029096:9181-9200 | None:intergenic | 25.0% |
| ! | AGTTTGAAAGCAAAATAAGT+GGG | + | tig0029096:9208-9227 | None:intergenic | 25.0% |
| ! | TAGTTTGAAAGCAAAATAAG+TGG | + | tig0029096:9209-9228 | None:intergenic | 25.0% |
| !! | AAAAAACATATTGACTGTAC+TGG | - | tig0029096:9298-9317 | Msa1440640:intron | 25.0% |
| ! | CAACAATATTAAAGATAGGT+GGG | + | tig0029096:9340-9359 | None:intergenic | 25.0% |
| ! | ACAACAATATTAAAGATAGG+TGG | + | tig0029096:9341-9360 | None:intergenic | 25.0% |
| ! | AATTACCAACTCTTAATGAT+TGG | - | tig0029096:9476-9495 | Msa1440640:intron | 25.0% |
| ! | ATTACCAACTCTTAATGATT+GGG | - | tig0029096:9477-9496 | Msa1440640:intron | 25.0% |
| !!! | TATTGGTTTCACAATTTAAC+TGG | - | tig0029096:9538-9557 | Msa1440640:intron | 25.0% |
| !! | AAGATAGATCCTCTAAAAAT+AGG | + | tig0029096:9795-9814 | None:intergenic | 25.0% |
| ! | TTATAACAACTTATGGTCAT+TGG | - | tig0029096:9814-9833 | Msa1440640:intron | 25.0% |
| !! | AAAACATTATTCCTTTTGGA+TGG | + | tig0029096:9840-9859 | None:intergenic | 25.0% |
| !! | ACTGAAAACATTATTCCTTT+TGG | + | tig0029096:9844-9863 | None:intergenic | 25.0% |
| ! | TAACATTTGTCTTTCTTCAA+TGG | + | tig0029096:10055-10074 | None:intergenic | 25.0% |
| ! | TTGAAGAAAGACAAATGTTA+AGG | - | tig0029096:10055-10074 | Msa1440640:intron | 25.0% |
| ! | TGAAGAAAGACAAATGTTAA+GGG | - | tig0029096:10056-10075 | Msa1440640:intron | 25.0% |
| ! | ATTTAATTAAGAAAAGGGGA+AGG | - | tig0029096:10260-10279 | Msa1440640:intron | 25.0% |
| ! | TATTCAATGCCTTAAGATTA+TGG | + | tig0029096:11040-11059 | None:intergenic | 25.0% |
| ! | CTTCATTAATATCTAAAGGA+TGG | - | tig0029096:11134-11153 | Msa1440640:intron | 25.0% |
| !! | ATTTTTAAATGAAGTAGCTG+AGG | - | tig0029096:11187-11206 | Msa1440640:intron | 25.0% |
| ! | TTGAACATTTCATAACAACT+TGG | - | tig0029096:11270-11289 | Msa1440640:intron | 25.0% |
| ! | ATAGTCTCTGACTAAAATAA+GGG | + | tig0029096:11331-11350 | None:intergenic | 25.0% |
| !! | CCAGATAAAATTAACACTTT+TGG | + | tig0029096:11588-11607 | None:intergenic | 25.0% |
| !!! | CCAAAAGTGTTAATTTTATC+TGG | - | tig0029096:11585-11604 | Msa1440640:intron | 25.0% |
| !! | TTCGAAGAATTGCTTTATTA+AGG | - | tig0029096:11705-11724 | Msa1440640:intron | 25.0% |
| !!! | GTTTTCTTTCAAGTTTATGT+GGG | - | tig0029096:11744-11763 | Msa1440640:intron | 25.0% |
| !!! | TTTTCTTTCAAGTTTATGTG+GGG | - | tig0029096:11745-11764 | Msa1440640:intron | 25.0% |
| ! | ATTCTTATTCTACCCAAAAA+GGG | + | tig0029096:11790-11809 | None:intergenic | 25.0% |
| ! | AATTCTTATTCTACCCAAAA+AGG | + | tig0029096:11791-11810 | None:intergenic | 25.0% |
| ! | ATATATGGAATAAACCAACT+TGG | - | tig0029096:11867-11886 | Msa1440640:CDS | 25.0% |
| ! | TATATGGAATAAACCAACTT+GGG | - | tig0029096:11868-11887 | Msa1440640:CDS | 25.0% |
| CATAATAGTCTCACACTTAA+GGG | + | tig0029096:1567-1586 | None:intergenic | 30.0% | |
| ACATAATAGTCTCACACTTA+AGG | + | tig0029096:1568-1587 | None:intergenic | 30.0% | |
| AGACTATTATGTATGTGATC+TGG | - | tig0029096:1576-1595 | Msa1440640:CDS | 30.0% | |
| ACGACATGGTAAAAAAAAGT+GGG | - | tig0029096:1624-1643 | Msa1440640:CDS | 30.0% | |
| TAGGAAACATAATGAATTGC+TGG | - | tig0029096:1804-1823 | Msa1440640:intron | 30.0% | |
| ! | ATGAATTGCTGGTGATTTTA+TGG | - | tig0029096:1815-1834 | Msa1440640:intron | 30.0% |
| CTTCACTTATGGTATTTCAT+GGG | + | tig0029096:1984-2003 | None:intergenic | 30.0% | |
| ! | GAAGGAATTTGAAATGACAA+AGG | - | tig0029096:2000-2019 | Msa1440640:intron | 30.0% |
| ACGAAACAAATCATCACATT+AGG | - | tig0029096:2109-2128 | Msa1440640:CDS | 30.0% | |
| GTGATAATACAATCCATTGT+AGG | + | tig0029096:2142-2161 | None:intergenic | 30.0% | |
| ATCTACTCTTGCATACAATA+CGG | - | tig0029096:2263-2282 | Msa1440640:intron | 30.0% | |
| ACATCTCTCTATTAAGTGTT+AGG | - | tig0029096:2312-2331 | Msa1440640:intron | 30.0% | |
| TTGTATCATTATCACTTGTG+TGG | + | tig0029096:2471-2490 | None:intergenic | 30.0% | |
| ATGTCGTTATATTTGATGGA+GGG | + | tig0029096:2543-2562 | None:intergenic | 30.0% | |
| AATGTCGTTATATTTGATGG+AGG | + | tig0029096:2544-2563 | None:intergenic | 30.0% | |
| TGAATTAATGGTAACTAGCA+TGG | + | tig0029096:2591-2610 | None:intergenic | 30.0% | |
| CATATACACAAACCAGAATT+GGG | - | tig0029096:2688-2707 | Msa1440640:intron | 30.0% | |
| !! | GAATATACCACTTTTGTTTC+AGG | - | tig0029096:2755-2774 | Msa1440640:intron | 30.0% |
| ATTGAAACCTGAAACAAAAG+TGG | + | tig0029096:2765-2784 | None:intergenic | 30.0% | |
| !! | TTTTATTTCGTTGACGCTTT+TGG | - | tig0029096:3031-3050 | Msa1440640:intron | 30.0% |
| CCTAACATATTTGAGTGTAT+CGG | + | tig0029096:3153-3172 | None:intergenic | 30.0% | |
| ACTCAAATATGTTAGGTGTA+CGG | - | tig0029096:3157-3176 | Msa1440640:intron | 30.0% | |
| !!! | TTTGTTTTCATAAAGTACCG+GGG | - | tig0029096:3213-3232 | Msa1440640:CDS | 30.0% |
| TTCATTTGTTCTTGCAGAAT+AGG | - | tig0029096:3282-3301 | Msa1440640:CDS | 30.0% | |
| ACTATTTGCTCATACTTCAT+AGG | + | tig0029096:3351-3370 | None:intergenic | 30.0% | |
| CAAATAGTAGAACTGTTGAA+TGG | - | tig0029096:3363-3382 | Msa1440640:intron | 30.0% | |
| ATGGAGGGTGAAAAAATTAT+TGG | - | tig0029096:3417-3436 | Msa1440640:intron | 30.0% | |
| GTGTATATTATGTGAATCAG+GGG | - | tig0029096:3517-3536 | Msa1440640:intron | 30.0% | |
| AAACAAAAGAAACCAGTCAT+AGG | - | tig0029096:3842-3861 | Msa1440640:intron | 30.0% | |
| TGGATATAGTATAGCACTTA+TGG | + | tig0029096:3959-3978 | None:intergenic | 30.0% | |
| AGTGCTATACTATATCCAAA+AGG | - | tig0029096:3961-3980 | Msa1440640:CDS | 30.0% | |
| !! | ACATTAATTGGGAAGTATTG+GGG | - | tig0029096:4056-4075 | Msa1440640:intron | 30.0% |
| TATCGATGCAGGATAATTAT+CGG | - | tig0029096:4083-4102 | Msa1440640:intron | 30.0% | |
| AAAATACCTTTGCATACGAA+TGG | - | tig0029096:4823-4842 | Msa1440640:intron | 30.0% | |
| AAAAATACCCACAATAGGTA+GGG | - | tig0029096:4895-4914 | Msa1440640:intron | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | tig0029096:5096-5115 | Msa1440640:intron | 30.0% | |
| !! | GACTAATTTGCCTTTTTGTT+TGG | + | tig0029096:5109-5128 | None:intergenic | 30.0% |
| GTACAGTAAATGTAAACAAG+AGG | - | tig0029096:5227-5246 | Msa1440640:intron | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | - | tig0029096:5319-5338 | Msa1440640:intron | 30.0% | |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | tig0029096:5328-5347 | None:intergenic | 30.0% |
| AAAATTATAAAGGGATCTCC+AGG | - | tig0029096:5328-5347 | Msa1440640:intron | 30.0% | |
| !!! | TACCGGTGTACAATTTTTTA+GGG | - | tig0029096:5652-5671 | Msa1440640:CDS | 30.0% |
| ATCCCTAAAAAATTGTACAC+CGG | + | tig0029096:5657-5676 | None:intergenic | 30.0% | |
| ! | GAAGCATATTTTCTTGTGAA+GGG | + | tig0029096:5813-5832 | None:intergenic | 30.0% |
| ! | TGAAGCATATTTTCTTGTGA+AGG | + | tig0029096:5814-5833 | None:intergenic | 30.0% |
| !! | CTTAGTTCTGACATAATACA+TGG | - | tig0029096:5870-5889 | Msa1440640:intron | 30.0% |
| ! | GAAATGGGAATTGGATTTTT+GGG | - | tig0029096:6009-6028 | Msa1440640:intron | 30.0% |
| ! | AAATGGGAATTGGATTTTTG+GGG | - | tig0029096:6010-6029 | Msa1440640:intron | 30.0% |
| AAGTTTCAGAAAATGGGATA+AGG | + | tig0029096:6636-6655 | None:intergenic | 30.0% | |
| !! | CTGTTTCAAGTTTCAGAAAA+TGG | + | tig0029096:6643-6662 | None:intergenic | 30.0% |
| ! | TTGTTTTCGATGATTCTTTC+GGG | - | tig0029096:6710-6729 | Msa1440640:intron | 30.0% |
| TCTCTAATGGAAGAAAATCT+GGG | + | tig0029096:6968-6987 | None:intergenic | 30.0% | |
| ATCTCTAATGGAAGAAAATC+TGG | + | tig0029096:6969-6988 | None:intergenic | 30.0% | |
| TTCATTGGATAGAAAGCTTA+AGG | + | tig0029096:7051-7070 | None:intergenic | 30.0% | |
| !! | TTTAAGTTGCCTCTTGAAAT+TGG | - | tig0029096:7092-7111 | Msa1440640:CDS | 30.0% |
| !!! | GTATTTTTTTTAAGTCCAGG+GGG | + | tig0029096:7391-7410 | None:intergenic | 30.0% |
| !!! | CGTGTATTTTTTTTAAGTCC+AGG | + | tig0029096:7394-7413 | None:intergenic | 30.0% |
| AAACAACAGAGAAATGAACT+GGG | + | tig0029096:7473-7492 | None:intergenic | 30.0% | |
| TAACAAACAATCTCCAGTTT+GGG | + | tig0029096:7732-7751 | None:intergenic | 30.0% | |
| !! | ATATCATGATTTGGTTTAGG+AGG | + | tig0029096:7814-7833 | None:intergenic | 30.0% |
| GGTAACACAATATCATGATT+TGG | + | tig0029096:7823-7842 | None:intergenic | 30.0% | |
| !! | GAATAAGCATTTTGATCATG+TGG | - | tig0029096:8076-8095 | Msa1440640:intron | 30.0% |
| ATCATGTGGATCAATTGTTT+GGG | - | tig0029096:8090-8109 | Msa1440640:intron | 30.0% | |
| TGAAACATTTCCAATGCATT+AGG | - | tig0029096:8114-8133 | Msa1440640:intron | 30.0% | |
| GAAACATTTCCAATGCATTA+GGG | - | tig0029096:8115-8134 | Msa1440640:intron | 30.0% | |
| TCTACATGATTCTCTCAATT+TGG | + | tig0029096:8179-8198 | None:intergenic | 30.0% | |
| GCATCATGCAAAATTATTGT+TGG | + | tig0029096:8451-8470 | None:intergenic | 30.0% | |
| ATAGTAGAAAAGAACCATCA+TGG | + | tig0029096:8482-8501 | None:intergenic | 30.0% | |
| GAATTAGAATGCGTAACTAA+TGG | - | tig0029096:8513-8532 | Msa1440640:intron | 30.0% | |
| ATTAGAATGCGTAACTAATG+GGG | - | tig0029096:8515-8534 | Msa1440640:intron | 30.0% | |
| !! | AGATAGGTTCTAAGATTGAA+GGG | + | tig0029096:8626-8645 | None:intergenic | 30.0% |
| TGGCAGGTTATATTTATAGT+TGG | - | tig0029096:8740-8759 | Msa1440640:intron | 30.0% | |
| CACGTTTCAAAAACAAAATC+TGG | - | tig0029096:8842-8861 | Msa1440640:intron | 30.0% | |
| AAAAACAAAATCTGGAAGGA+AGG | - | tig0029096:8850-8869 | Msa1440640:intron | 30.0% | |
| AAAACAAAATCTGGAAGGAA+GGG | - | tig0029096:8851-8870 | Msa1440640:intron | 30.0% | |
| ATAAAGCATGATTTCCCAAA+CGG | + | tig0029096:8959-8978 | None:intergenic | 30.0% | |
| TTACTTTGTATTTAAGCGTG+GGG | + | tig0029096:9023-9042 | None:intergenic | 30.0% | |
| CATTACTTTGTATTTAAGCG+TGG | + | tig0029096:9025-9044 | None:intergenic | 30.0% | |
| CACGCTTAAATACAAAGTAA+TGG | - | tig0029096:9023-9042 | Msa1440640:intron | 30.0% | |
| AGACCATAACTATATTCATG+AGG | + | tig0029096:9121-9140 | None:intergenic | 30.0% | |
| CTTTCAAACTATCTGATTAC+AGG | - | tig0029096:9218-9237 | Msa1440640:intron | 30.0% | |
| !!! | CTCCAATGTTTTTTGTCTTT+CGG | - | tig0029096:9272-9291 | Msa1440640:intron | 30.0% |
| TTCCGAAAGACAAAAAACAT+TGG | + | tig0029096:9277-9296 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGTAGGACTTCT+TGG | - | tig0029096:9426-9445 | Msa1440640:intron | 30.0% |
| TTACCAACTCTTAATGATTG+GGG | - | tig0029096:9478-9497 | Msa1440640:intron | 30.0% | |
| !!! | ATCCTGAGGTTTGTTTTTAT+TGG | - | tig0029096:9521-9540 | Msa1440640:intron | 30.0% |
| AACCAATAAAAACAAACCTC+AGG | + | tig0029096:9526-9545 | None:intergenic | 30.0% | |
| ACACATACATTAAACATTCC+AGG | - | tig0029096:9618-9637 | Msa1440640:intron | 30.0% | |
| ! | TATACCTTTTTAATCTGACC+TGG | + | tig0029096:9639-9658 | None:intergenic | 30.0% |
| ! | GGTCAGATTAAAAAGGTATA+TGG | - | tig0029096:9639-9658 | Msa1440640:intron | 30.0% |
| TATCATGTACAAGTAGTAGA+AGG | + | tig0029096:9735-9754 | None:intergenic | 30.0% | |
| !!! | GTCACAAAACCTATTTTTAG+AGG | - | tig0029096:9783-9802 | Msa1440640:intron | 30.0% |
| TTCTATGAACTCCTTCAATT+TGG | - | tig0029096:9930-9949 | Msa1440640:CDS | 30.0% | |
| AGCTTATGTTACCAAATTGA+AGG | + | tig0029096:9944-9963 | None:intergenic | 30.0% | |
| !!! | TAGTTTTTTCTAATTGTGCC+AGG | - | tig0029096:9969-9988 | Msa1440640:CDS | 30.0% |
| !! | GATCTCTTTACAAAGTGTTT+TGG | - | tig0029096:10011-10030 | Msa1440640:intron | 30.0% |
| AAGACAAATGTTAAGGGATA+AGG | - | tig0029096:10062-10081 | Msa1440640:intron | 30.0% | |
| ! | AGGTGGATTCAAATTCATTT+AGG | + | tig0029096:10324-10343 | None:intergenic | 30.0% |
| TTAGGATCTTGAATTTCTGA+AGG | - | tig0029096:10409-10428 | Msa1440640:intron | 30.0% | |
| TATAAAGCTAGCAAAGGTAA+AGG | - | tig0029096:10692-10711 | Msa1440640:intron | 30.0% | |
| GGATTAATGATTAAGTCTAC+CGG | - | tig0029096:10813-10832 | Msa1440640:intron | 30.0% | |
| GATTAATGATTAAGTCTACC+GGG | - | tig0029096:10814-10833 | Msa1440640:intron | 30.0% | |
| TTAATATCTAAAGGATGGCT+TGG | - | tig0029096:11139-11158 | Msa1440640:intron | 30.0% | |
| CATAGTCTCTGACTAAAATA+AGG | + | tig0029096:11332-11351 | None:intergenic | 30.0% | |
| TTCAATTGAAAGCAGAACAT+TGG | + | tig0029096:11368-11387 | None:intergenic | 30.0% | |
| ! | GCTTTGGTAATATTTAGCAT+TGG | + | tig0029096:11508-11527 | None:intergenic | 30.0% |
| !!! | GGTTTTCTTTCAAGTTTATG+TGG | - | tig0029096:11743-11762 | Msa1440640:intron | 30.0% |
| !! | TTTCTTTCAAGTTTATGTGG+GGG | - | tig0029096:11746-11765 | Msa1440640:intron | 30.0% |
| ! | AATTGTATAAACCCCCTTTT+TGG | - | tig0029096:11774-11793 | Msa1440640:intron | 30.0% |
| ! | ATTGTATAAACCCCCTTTTT+GGG | - | tig0029096:11775-11794 | Msa1440640:intron | 30.0% |
| TTCTTATTCTACCCAAAAAG+GGG | + | tig0029096:11789-11808 | None:intergenic | 30.0% | |
| GAGATGCTTGTAGATATATA+TGG | - | tig0029096:11852-11871 | Msa1440640:intron | 30.0% | |
| TTTCTCATAGTCAAACGTGA+TGG | + | tig0029096:1408-1427 | None:intergenic | 35.0% | |
| ATCTGGTGAGATATCACATA+AGG | - | tig0029096:1593-1612 | Msa1440640:CDS | 35.0% | |
| CACGACATGGTAAAAAAAAG+TGG | - | tig0029096:1623-1642 | Msa1440640:CDS | 35.0% | |
| CATGGTAAAAAAAAGTGGGT+TGG | - | tig0029096:1628-1647 | Msa1440640:CDS | 35.0% | |
| TATTTCATGGGATCTTGCAA+TGG | + | tig0029096:1972-1991 | None:intergenic | 35.0% | |
| CCTTCACTTATGGTATTTCA+TGG | + | tig0029096:1985-2004 | None:intergenic | 35.0% | |
| CCATGAAATACCATAAGTGA+AGG | - | tig0029096:1982-2001 | Msa1440640:intron | 35.0% | |
| ACAAATCATCACATTAGGCT+AGG | - | tig0029096:2114-2133 | Msa1440640:CDS | 35.0% | |
| TGTCGATCTACATCAACTTA+GGG | + | tig0029096:2431-2450 | None:intergenic | 35.0% | |
| TTGTCGATCTACATCAACTT+AGG | + | tig0029096:2432-2451 | None:intergenic | 35.0% | |
| GTTGATGTAGATCGACAATT+TGG | - | tig0029096:2434-2453 | Msa1440640:intron | 35.0% | |
| AGGGAATATTGTGATGTATC+AGG | + | tig0029096:2524-2543 | None:intergenic | 35.0% | |
| !! | CCAATTCTGGTTTGTGTATA+TGG | + | tig0029096:2690-2709 | None:intergenic | 35.0% |
| CCATATACACAAACCAGAAT+TGG | - | tig0029096:2687-2706 | Msa1440640:intron | 35.0% | |
| !! | TTGTTTCAGGTTTCAATAGC+TGG | - | tig0029096:2768-2787 | Msa1440640:intron | 35.0% |
| TTCAATAGCTGGAACTTCTA+CGG | - | tig0029096:2779-2798 | Msa1440640:intron | 35.0% | |
| CCGATACACTCAAATATGTT+AGG | - | tig0029096:3150-3169 | Msa1440640:intron | 35.0% | |
| AAATTAGATATCCAGAACCC+CGG | + | tig0029096:3233-3252 | None:intergenic | 35.0% | |
| ! | GGTACTGAACATGAAAAGTT+TGG | - | tig0029096:3303-3322 | Msa1440640:intron | 35.0% |
| TTTATCCCAGCCAAATCTTT+CGG | + | tig0029096:3394-3413 | None:intergenic | 35.0% | |
| ATTTGGCTGGGATAAAGTAA+TGG | - | tig0029096:3398-3417 | Msa1440640:intron | 35.0% | |
| TTCATCATAAGTCTGATGCA+GGG | + | tig0029096:3604-3623 | None:intergenic | 35.0% | |
| TTTCATCATAAGTCTGATGC+AGG | + | tig0029096:3605-3624 | None:intergenic | 35.0% | |
| ! | AACACTAGCAATGTTCCTTT+TGG | + | tig0029096:3979-3998 | None:intergenic | 35.0% |
| GATACTCTCCTGATATGTAT+CGG | - | tig0029096:4175-4194 | Msa1440640:intron | 35.0% | |
| ATACTCTCCTGATATGTATC+GGG | - | tig0029096:4176-4195 | Msa1440640:intron | 35.0% | |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | - | tig0029096:4234-4253 | Msa1440640:intron | 35.0% |
| !!! | GTCATCCATTTTGAAGTATC+GGG | - | tig0029096:4235-4254 | Msa1440640:intron | 35.0% |
| TTTGTCCCGATACTTCAAAA+TGG | + | tig0029096:4243-4262 | None:intergenic | 35.0% | |
| ! | CAAAAGACCGAAGGAATTTT+TGG | - | tig0029096:4453-4472 | Msa1440640:intron | 35.0% |
| TCCTCTACCAAAAATTCCTT+CGG | + | tig0029096:4463-4482 | None:intergenic | 35.0% | |
| ! | CAAAAGACCGAAGGAATTTT+TGG | - | tig0029096:4453-4472 | Msa1440640:intron | 35.0% |
| TCCTCTACCAAAAATTCCTT+CGG | + | tig0029096:4463-4482 | None:intergenic | 35.0% | |
| ACTCTGTGAATACTTGGATT+TGG | + | tig0029096:4730-4749 | None:intergenic | 35.0% | |
| !! | ACCTATTGTGGGTATTTTTG+CGG | + | tig0029096:4894-4913 | None:intergenic | 35.0% |
| CAAAAATACCCACAATAGGT+AGG | - | tig0029096:4894-4913 | Msa1440640:intron | 35.0% | |
| ! | AGTTTTACCCTACCTATTGT+GGG | + | tig0029096:4905-4924 | None:intergenic | 35.0% |
| AGGGTAAAACTCATCTTTCA+TGG | - | tig0029096:4914-4933 | Msa1440640:intron | 35.0% | |
| GGGTAAAACTCATCTTTCAT+GGG | - | tig0029096:4915-4934 | Msa1440640:intron | 35.0% | |
| AAACTCATCTTTCATGGGTT+TGG | - | tig0029096:4920-4939 | Msa1440640:intron | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | tig0029096:5183-5202 | Msa1440640:intron | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | - | tig0029096:5318-5337 | Msa1440640:intron | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+TGG | - | tig0029096:5387-5406 | Msa1440640:intron | 35.0% |
| ! | TTTTTACATTGGCCCAAGTT+GGG | - | tig0029096:5388-5407 | Msa1440640:intron | 35.0% |
| CTAAAAAATTGTACACCGGT+AGG | + | tig0029096:5653-5672 | None:intergenic | 35.0% | |
| !!! | CTACCGGTGTACAATTTTTT+AGG | - | tig0029096:5651-5670 | Msa1440640:CDS | 35.0% |
| ! | GGAAATGGGAATTGGATTTT+TGG | - | tig0029096:6008-6027 | Msa1440640:intron | 35.0% |
| TGTTATCTGACTTTGTGTTG+TGG | - | tig0029096:6153-6172 | Msa1440640:intron | 35.0% | |
| ! | TCTGAAACTTGAAACAGTCA+TGG | - | tig0029096:6646-6665 | Msa1440640:intron | 35.0% |
| AAACTTGAAACAGTCATGGT+TGG | - | tig0029096:6650-6669 | Msa1440640:intron | 35.0% | |
| AATTGCAACTGAGATCAATG+AGG | - | tig0029096:6794-6813 | Msa1440640:intron | 35.0% | |
| AATCTGGGTGTTTAATTCCT+CGG | + | tig0029096:6953-6972 | None:intergenic | 35.0% | |
| GATAGAAAGCTTAAGGTCTA+TGG | + | tig0029096:7044-7063 | None:intergenic | 35.0% | |
| TCAAGAGGCAACTTAAAGAT+TGG | + | tig0029096:7089-7108 | None:intergenic | 35.0% | |
| ! | TGAAGATTTGATGACTTTGG+AGG | + | tig0029096:7120-7139 | None:intergenic | 35.0% |
| !! | TATAGGCATTGAAGGAATCT+TGG | + | tig0029096:7172-7191 | None:intergenic | 35.0% |
| !! | GGAATTCTTATAGGCATTGA+AGG | + | tig0029096:7180-7199 | None:intergenic | 35.0% |
| AATGCCTATAAGAATTCCCT+TGG | - | tig0029096:7182-7201 | Msa1440640:intron | 35.0% | |
| GAAACCAAGGGAATTCTTAT+AGG | + | tig0029096:7189-7208 | None:intergenic | 35.0% | |
| AAATCCTCTATATTTCCCCT+TGG | - | tig0029096:7230-7249 | Msa1440640:CDS | 35.0% | |
| AAGAACCTATATTGTACCCA+GGG | - | tig0029096:7330-7349 | Msa1440640:intron | 35.0% | |
| ! | ATTTTGCAAAATGAACCTCC+TGG | - | tig0029096:7426-7445 | Msa1440640:intron | 35.0% |
| TGCAAAAGAATTATTCCAGG+AGG | + | tig0029096:7444-7463 | None:intergenic | 35.0% | |
| GAAACAACAGAGAAATGAAC+TGG | + | tig0029096:7474-7493 | None:intergenic | 35.0% | |
| AAAGATGAATGAGGTAGTAG+AGG | + | tig0029096:7539-7558 | None:intergenic | 35.0% | |
| GTAACAAACAATCTCCAGTT+TGG | + | tig0029096:7733-7752 | None:intergenic | 35.0% | |
| GATCATGTGGATCAATTGTT+TGG | - | tig0029096:8089-8108 | Msa1440640:intron | 35.0% | |
| ATTTCCAATGCATTAGGGTT+GGG | - | tig0029096:8120-8139 | Msa1440640:intron | 35.0% | |
| CATGTAAAGCAAACAGAATG+TGG | + | tig0029096:8323-8342 | None:intergenic | 35.0% | |
| TTGGATTCTTGCTCATTTGA+TGG | + | tig0029096:8432-8451 | None:intergenic | 35.0% | |
| !! | GAGATAGGTTCTAAGATTGA+AGG | + | tig0029096:8627-8646 | None:intergenic | 35.0% |
| TAATGAGAAATAAGTGTGGC+AGG | - | tig0029096:8724-8743 | Msa1440640:intron | 35.0% | |
| TGAAGAATTATGGGATGAGA+GGG | + | tig0029096:9171-9190 | None:intergenic | 35.0% | |
| TCTCATCCCATAATTCTTCA+CGG | - | tig0029096:9171-9190 | Msa1440640:intron | 35.0% | |
| !! | TTAAGAGTTGGTAATTCACC+AGG | + | tig0029096:9472-9491 | None:intergenic | 35.0% |
| TTTGACCACATTATATCCTG+AGG | - | tig0029096:9507-9526 | Msa1440640:intron | 35.0% | |
| ACAAACCTCAGGATATAATG+TGG | + | tig0029096:9515-9534 | None:intergenic | 35.0% | |
| TGGTTTCACAATTTAACTGG+TGG | - | tig0029096:9541-9560 | Msa1440640:intron | 35.0% | |
| CATTCCAGGTCAGATTAAAA+AGG | - | tig0029096:9632-9651 | Msa1440640:intron | 35.0% | |
| ! | AAAAGGTATATGGAGATGAG+AGG | - | tig0029096:9649-9668 | Msa1440640:intron | 35.0% |
| AAAGCGCATAAACTTCTGAT+AGG | + | tig0029096:9688-9707 | None:intergenic | 35.0% | |
| !! | TAGGTTTTGTGACTTTCTCA+AGG | + | tig0029096:9776-9795 | None:intergenic | 35.0% |
| ! | TTTTTCTAATTGTGCCAGGT+AGG | - | tig0029096:9973-9992 | Msa1440640:CDS | 35.0% |
| ! | TTTTCTAATTGTGCCAGGTA+GGG | - | tig0029096:9974-9993 | Msa1440640:CDS | 35.0% |
| ! | TTTTGGATTTGACTGCAGAT+TGG | - | tig0029096:10028-10047 | Msa1440640:intron | 35.0% |
| AGCTCATATGGATTTCTATG+CGG | + | tig0029096:10193-10212 | None:intergenic | 35.0% | |
| TCATTTAGGCAAAGTGATCA+AGG | + | tig0029096:10310-10329 | None:intergenic | 35.0% | |
| ! | ATTTGAAACCTGTCTAGATG+AGG | - | tig0029096:10441-10460 | Msa1440640:intron | 35.0% |
| ACATATTTCCTCATCTAGAC+AGG | + | tig0029096:10452-10471 | None:intergenic | 35.0% | |
| AGAGAGAGAGTGACTAAATA+AGG | + | tig0029096:10476-10495 | None:intergenic | 35.0% | |
| ! | ATTGACAACTGAAGTATCTC+TGG | - | tig0029096:10601-10620 | Msa1440640:intron | 35.0% |
| AGAGGTTATAAAGCTAGCAA+AGG | - | tig0029096:10686-10705 | Msa1440640:intron | 35.0% | |
| TTACTATCAATGTTGCCAAG+AGG | - | tig0029096:10738-10757 | Msa1440640:intron | 35.0% | |
| TATATACCAATCGATCCTCT+TGG | + | tig0029096:10756-10775 | None:intergenic | 35.0% | |
| CTTAATCATTAATCCGTCGT+TGG | + | tig0029096:10808-10827 | None:intergenic | 35.0% | |
| TTTGATCCATTATCCGTTGT+TGG | + | tig0029096:10842-10861 | None:intergenic | 35.0% | |
| TGATCCATTATCACTATACC+TGG | - | tig0029096:10876-10895 | Msa1440640:intron | 35.0% | |
| TCATCCAGGTATAGTGATAA+TGG | + | tig0029096:10883-10902 | None:intergenic | 35.0% | |
| AGTTAGGTTATATGGAGGAT+CGG | + | tig0029096:10913-10932 | None:intergenic | 35.0% | |
| ATCCTCCATATAACCTAACT+AGG | - | tig0029096:10913-10932 | Msa1440640:intron | 35.0% | |
| TCCTCCATATAACCTAACTA+GGG | - | tig0029096:10914-10933 | Msa1440640:intron | 35.0% | |
| AGATCCCTAGTTAGGTTATA+TGG | + | tig0029096:10921-10940 | None:intergenic | 35.0% | |
| ATGGTATAAGATCCCTAGTT+AGG | + | tig0029096:10929-10948 | None:intergenic | 35.0% | |
| ! | AGGGATCTTATACCATGTTT+TGG | - | tig0029096:10933-10952 | Msa1440640:intron | 35.0% |
| ! | GGGATCTTATACCATGTTTT+GGG | - | tig0029096:10934-10953 | Msa1440640:intron | 35.0% |
| ! | GGATCTTATACCATGTTTTG+GGG | - | tig0029096:10935-10954 | Msa1440640:intron | 35.0% |
| TAAGATTATGGATGGAGATG+TGG | + | tig0029096:11028-11047 | None:intergenic | 35.0% | |
| CATCTCCATCCATAATCTTA+AGG | - | tig0029096:11028-11047 | Msa1440640:intron | 35.0% | |
| CAATGCCTTAAGATTATGGA+TGG | + | tig0029096:11036-11055 | None:intergenic | 35.0% | |
| TTTAAATGAAGTAGCTGAGG+TGG | - | tig0029096:11190-11209 | Msa1440640:intron | 35.0% | |
| AAAAATCCCATTACCTGTTC+TGG | + | tig0029096:11216-11235 | None:intergenic | 35.0% | |
| TGAACTATCGTCTATCTAGT+AGG | - | tig0029096:11305-11324 | Msa1440640:intron | 35.0% | |
| ATTACCAAAGCAATACTGTG+AGG | - | tig0029096:11517-11536 | Msa1440640:intron | 35.0% | |
| !! | CTAATACTTTTTGTGTTGCC+AGG | - | tig0029096:11615-11634 | Msa1440640:intron | 35.0% |
| !!! | AGGCTTTTGGAATTGTATCA+TGG | - | tig0029096:11654-11673 | Msa1440640:intron | 35.0% |
| TGGAATTGTATCATGGAAAG+TGG | - | tig0029096:11661-11680 | Msa1440640:intron | 35.0% | |
| GGAATTGTATCATGGAAAGT+GGG | - | tig0029096:11662-11681 | Msa1440640:intron | 35.0% | |
| TTAAGGTGTATTTAGCTGCT+TGG | - | tig0029096:11722-11741 | Msa1440640:intron | 35.0% | |
| TCTTATTCTACCCAAAAAGG+GGG | + | tig0029096:11788-11807 | None:intergenic | 35.0% | |
| TGTGATGACAATCTCACTTG+TGG | + | tig0029096:1433-1452 | None:intergenic | 40.0% | |
| !! | GGTAAAAAAAAGTGGGTTGG+CGG | - | tig0029096:1631-1650 | Msa1440640:CDS | 40.0% |
| !! | CGTTTTATTCGTGAGAGCAT+AGG | - | tig0029096:1785-1804 | Msa1440640:intron | 40.0% |
| ATTAGGCTAGGATCCTACAA+TGG | - | tig0029096:2126-2145 | Msa1440640:intron | 40.0% | |
| TACGGTACACTCGTAAATTG+AGG | - | tig0029096:2797-2816 | Msa1440640:intron | 40.0% | |
| ACTCGTAAATTGAGGTGTAC+TGG | - | tig0029096:2805-2824 | Msa1440640:intron | 40.0% | |
| AATGGCATTGCCGAAAGATT+TGG | - | tig0029096:3381-3400 | Msa1440640:intron | 40.0% | |
| GCTTCAAAACATATCACTGG+AGG | - | tig0029096:3539-3558 | Msa1440640:intron | 40.0% | |
| AAACAAAAAGCTGTGAAGCC+CGG | - | tig0029096:3676-3695 | Msa1440640:intron | 40.0% | |
| TATCGATGCAGTATCGTATC+CGG | + | tig0029096:3698-3717 | None:intergenic | 40.0% | |
| ! | GCACTTATGGTGCTCTTTTT+GGG | + | tig0029096:3946-3965 | None:intergenic | 40.0% |
| ! | AGCACTTATGGTGCTCTTTT+TGG | + | tig0029096:3947-3966 | None:intergenic | 40.0% |
| GATACTCTCCTGATACGAAT+CGG | - | tig0029096:4105-4124 | Msa1440640:intron | 40.0% | |
| ATACTCTCCTGATACGAATC+GGG | - | tig0029096:4106-4125 | Msa1440640:intron | 40.0% | |
| ! | TGATACGAATCGGGAAGTAT+CGG | - | tig0029096:4115-4134 | Msa1440640:intron | 40.0% |
| ACACTTCGTGAACTTGTGAA+GGG | + | tig0029096:4356-4375 | None:intergenic | 40.0% | |
| AACACTTCGTGAACTTGTGA+AGG | + | tig0029096:4357-4376 | None:intergenic | 40.0% | |
| GTATCATCTCAAAAGACCGA+AGG | - | tig0029096:4444-4463 | Msa1440640:intron | 40.0% | |
| !!! | ACCGAAGGAATTTTTGGTAG+AGG | - | tig0029096:4459-4478 | Msa1440640:intron | 40.0% |
| AGAGGAAATCCATTCCCTTT+AGG | - | tig0029096:4477-4496 | Msa1440640:intron | 40.0% | |
| GTTCTAACCACTGTCCTAAA+GGG | + | tig0029096:4494-4513 | None:intergenic | 40.0% | |
| ! | AGTTCTAACCACTGTCCTAA+AGG | + | tig0029096:4495-4514 | None:intergenic | 40.0% |
| GTATCATCTCAAAAGACCGA+AGG | - | tig0029096:4444-4463 | Msa1440640:intron | 40.0% | |
| !!! | ACCGAAGGAATTTTTGGTAG+AGG | - | tig0029096:4459-4478 | Msa1440640:intron | 40.0% |
| AGAGGAAATCCATTCCCTTT+AGG | - | tig0029096:4477-4496 | Msa1440640:intron | 40.0% | |
| GTTCTAACCACTGTCCTAAA+GGG | + | tig0029096:4494-4513 | None:intergenic | 40.0% | |
| ! | AGTTCTAACCACTGTCCTAA+AGG | + | tig0029096:4495-4514 | None:intergenic | 40.0% |
| TGCTCTACTCTGTGAATACT+TGG | + | tig0029096:4736-4755 | None:intergenic | 40.0% | |
| TTCAATTGCCATCACACAAC+CGG | + | tig0029096:4853-4872 | None:intergenic | 40.0% | |
| !! | CCTATTGTGGGTATTTTTGC+GGG | + | tig0029096:4893-4912 | None:intergenic | 40.0% |
| ! | GAGTTTTACCCTACCTATTG+TGG | + | tig0029096:4906-4925 | None:intergenic | 40.0% |
| CTAATTTACGTTGAGTCCCA+AGG | + | tig0029096:5161-5180 | None:intergenic | 40.0% | |
| ! | GAGTTTCTACTGTATTGGCA+CGG | - | tig0029096:5467-5486 | Msa1440640:intron | 40.0% |
| ! | AGTTTCTACTGTATTGGCAC+GGG | - | tig0029096:5468-5487 | Msa1440640:intron | 40.0% |
| ATATGTATATGCGGGGTTGT+GGG | + | tig0029096:5516-5535 | None:intergenic | 40.0% | |
| AATATGTATATGCGGGGTTG+TGG | + | tig0029096:5517-5536 | None:intergenic | 40.0% | |
| ATAGGTTAAAGCTGTTGCTG+AGG | - | tig0029096:5987-6006 | Msa1440640:intron | 40.0% | |
| TAAAGCTGTTGCTGAGGAAA+TGG | - | tig0029096:5993-6012 | Msa1440640:intron | 40.0% | |
| AAAGCTGTTGCTGAGGAAAT+GGG | - | tig0029096:5994-6013 | Msa1440640:intron | 40.0% | |
| !! | GGAATTGGATTTTTGGGGAT+AGG | - | tig0029096:6015-6034 | Msa1440640:intron | 40.0% |
| ATGTCTTTGAGTCCTGACTT+TGG | + | tig0029096:6048-6067 | None:intergenic | 40.0% | |
| AAAACTACCCTTGGTATCGT+AGG | + | tig0029096:6072-6091 | None:intergenic | 40.0% | |
| ! | TTGCCTAAAGTTGGTTCTTC+TGG | - | tig0029096:6208-6227 | Msa1440640:intron | 40.0% |
| ! | TGCCTAAAGTTGGTTCTTCT+GGG | - | tig0029096:6209-6228 | Msa1440640:intron | 40.0% |
| TTCTTACAGGCTGCAAACTT+AGG | + | tig0029096:6399-6418 | None:intergenic | 40.0% | |
| GCTGTTGCTATCTGTTATGA+AGG | + | tig0029096:6490-6509 | None:intergenic | 40.0% | |
| CAAATTCACCCTTCACAGAT+GGG | - | tig0029096:6518-6537 | Msa1440640:intron | 40.0% | |
| ! | GTAGGAGAAGGTACATGAAA+TGG | - | tig0029096:6560-6579 | Msa1440640:intron | 40.0% |
| AGGGAAAAGAGATATGACAC+CGG | - | tig0029096:6878-6897 | Msa1440640:intron | 40.0% | |
| ATATGACACCGGATTTACAG+TGG | - | tig0029096:6889-6908 | Msa1440640:CDS | 40.0% | |
| !! | AGTGGATTAAGCTCATAGCA+AGG | + | tig0029096:6929-6948 | None:intergenic | 40.0% |
| ATCTGGGTGTTTAATTCCTC+GGG | + | tig0029096:6952-6971 | None:intergenic | 40.0% | |
| AGAAAGCTTAAGGTCTATGG+TGG | + | tig0029096:7041-7060 | None:intergenic | 40.0% | |
| TTGGAGGATCCAATTTCAAG+AGG | + | tig0029096:7104-7123 | None:intergenic | 40.0% | |
| TCTTGGTGAAGATGTATCGT+GGG | + | tig0029096:7155-7174 | None:intergenic | 40.0% | |
| ATCTTGGTGAAGATGTATCG+TGG | + | tig0029096:7156-7175 | None:intergenic | 40.0% | |
| TAAGAATTCCCTTGGTTTCG+TGG | - | tig0029096:7190-7209 | Msa1440640:intron | 40.0% | |
| TCAAAGTTCCACGAAACCAA+GGG | + | tig0029096:7201-7220 | None:intergenic | 40.0% | |
| ATCAAAGTTCCACGAAACCA+AGG | + | tig0029096:7202-7221 | None:intergenic | 40.0% | |
| ! | TAGGATCTTTTCTCCTCCAA+GGG | + | tig0029096:7249-7268 | None:intergenic | 40.0% |
| ! | ATAGGATCTTTTCTCCTCCA+AGG | + | tig0029096:7250-7269 | None:intergenic | 40.0% |
| CAAGAACCTATATTGTACCC+AGG | - | tig0029096:7329-7348 | Msa1440640:intron | 40.0% | |
| AGAACCTATATTGTACCCAG+GGG | - | tig0029096:7331-7350 | Msa1440640:intron | 40.0% | |
| GGGTGCAAAAGAATTATTCC+AGG | + | tig0029096:7447-7466 | None:intergenic | 40.0% | |
| AAGTGAGAATGACAGAGAGA+AGG | + | tig0029096:7496-7515 | None:intergenic | 40.0% | |
| GGTTAGAGGAAAGATGAATG+AGG | + | tig0029096:7548-7567 | None:intergenic | 40.0% | |
| AATTAGATTCGTGTGCGTGA+GGG | + | tig0029096:7678-7697 | None:intergenic | 40.0% | |
| AAATTAGATTCGTGTGCGTG+AGG | + | tig0029096:7679-7698 | None:intergenic | 40.0% | |
| AAACAATCTCCAGTTTGGGA+AGG | + | tig0029096:7728-7747 | None:intergenic | 40.0% | |
| !! | GAAAATGCAGCTTTGAAGCT+TGG | + | tig0029096:7899-7918 | None:intergenic | 40.0% |
| CATTTCCAATGCATTAGGGT+TGG | - | tig0029096:8119-8138 | Msa1440640:intron | 40.0% | |
| AAGAACCATCATGGTTGTTG+TGG | + | tig0029096:8473-8492 | None:intergenic | 40.0% | |
| ! | AGATTGAAGGGTACAATCAG+TGG | + | tig0029096:8614-8633 | None:intergenic | 40.0% |
| ! | CTTGACGCTTTGCGTTTTTA+GGG | + | tig0029096:8908-8927 | None:intergenic | 40.0% |
| ! | ACTTGACGCTTTGCGTTTTT+AGG | + | tig0029096:8909-8928 | None:intergenic | 40.0% |
| TTTCAGCGAATGAAACCGTT+TGG | - | tig0029096:8941-8960 | Msa1440640:intron | 40.0% | |
| TTCAGCGAATGAAACCGTTT+GGG | - | tig0029096:8942-8961 | Msa1440640:intron | 40.0% | |
| AAAGATCATGCTCACAAGAG+AGG | + | tig0029096:9147-9166 | None:intergenic | 40.0% | |
| GTGAAGAATTATGGGATGAG+AGG | + | tig0029096:9172-9191 | None:intergenic | 40.0% | |
| ! | TTTTTGTAGGACTTCTTGGC+AGG | - | tig0029096:9430-9449 | Msa1440640:intron | 40.0% |
| TAGCCCCAATCATTAAGAGT+TGG | + | tig0029096:9484-9503 | None:intergenic | 40.0% | |
| CAGAAGTTTATGCGCTTTAC+CGG | - | tig0029096:9690-9709 | Msa1440640:CDS | 40.0% | |
| CCTAGCTTACTTAAGCTTCT+GGG | + | tig0029096:10125-10144 | None:intergenic | 40.0% | |
| ACCTAGCTTACTTAAGCTTC+TGG | + | tig0029096:10126-10145 | None:intergenic | 40.0% | |
| TGGATTTCTATGCGGAATGT+TGG | + | tig0029096:10185-10204 | None:intergenic | 40.0% | |
| ATCCATATGAGCTTGAAGCA+TGG | - | tig0029096:10200-10219 | Msa1440640:intron | 40.0% | |
| TCCATATGAGCTTGAAGCAT+GGG | - | tig0029096:10201-10220 | Msa1440640:intron | 40.0% | |
| AAGGTACAACAGACACATTG+GGG | + | tig0029096:10232-10251 | None:intergenic | 40.0% | |
| CAAGGTACAACAGACACATT+GGG | + | tig0029096:10233-10252 | None:intergenic | 40.0% | |
| ACAAGGTACAACAGACACAT+TGG | + | tig0029096:10234-10253 | None:intergenic | 40.0% | |
| ! | ACAACTGAAGTATCTCTGGT+AGG | - | tig0029096:10605-10624 | Msa1440640:intron | 40.0% |
| TCCCTAGTTAGGTTATATGG+AGG | + | tig0029096:10918-10937 | None:intergenic | 40.0% | |
| TACTCCTCACAGTATTGCTT+TGG | + | tig0029096:11524-11543 | None:intergenic | 40.0% | |
| TGGAATAAACCAACTTGGGT+TGG | - | tig0029096:11872-11891 | Msa1440640:CDS | 40.0% | |
| ATAAGGTCAGAGACACGACA+TGG | - | tig0029096:1610-1629 | Msa1440640:CDS | 45.0% | |
| ACACAAACCAGAATTGGGTG+TGG | - | tig0029096:2693-2712 | Msa1440640:intron | 45.0% | |
| GTTTCATCCACACCCAATTC+TGG | + | tig0029096:2703-2722 | None:intergenic | 45.0% | |
| AAACTCTCTGCACGTGTTGA+AGG | + | tig0029096:3192-3211 | None:intergenic | 45.0% | |
| !! | TTCATAAAGTACCGGGGTTC+TGG | - | tig0029096:3219-3238 | Msa1440640:CDS | 45.0% |
| CATTGCCGAAAGATTTGGCT+GGG | - | tig0029096:3386-3405 | Msa1440640:intron | 45.0% | |
| TGGCTGGGATAAAGTAATGG+AGG | - | tig0029096:3401-3420 | Msa1440640:intron | 45.0% | |
| ! | GGCTGGGATAAAGTAATGGA+GGG | - | tig0029096:3402-3421 | Msa1440640:intron | 45.0% |
| GGGGCTTCAAAACATATCAC+TGG | - | tig0029096:3536-3555 | Msa1440640:intron | 45.0% | |
| CAAAACATATCACTGGAGGC+AGG | - | tig0029096:3543-3562 | Msa1440640:intron | 45.0% | |
| TCTGATGCAGGGTTTCAAGA+GGG | + | tig0029096:3593-3612 | None:intergenic | 45.0% | |
| ATCGATGCAGTATCGTATCC+GGG | + | tig0029096:3697-3716 | None:intergenic | 45.0% | |
| !! | TAATTGGGAAGTATTGGGGC+AGG | - | tig0029096:4060-4079 | Msa1440640:intron | 45.0% |
| ! | GATACTTCCCGATTCGTATC+AGG | + | tig0029096:4116-4135 | None:intergenic | 45.0% |
| ATACCTGCCCGATACATATC+AGG | + | tig0029096:4186-4205 | None:intergenic | 45.0% | |
| GATATGTATCGGGCAGGTAT+CGG | - | tig0029096:4186-4205 | Msa1440640:intron | 45.0% | |
| !! | ATCCATTCCCTTTAGGACAG+TGG | - | tig0029096:4484-4503 | Msa1440640:intron | 45.0% |
| AACCACTGTCCTAAAGGGAA+TGG | + | tig0029096:4489-4508 | None:intergenic | 45.0% | |
| !! | ATCCATTCCCTTTAGGACAG+TGG | - | tig0029096:4484-4503 | Msa1440640:intron | 45.0% |
| AACCACTGTCCTAAAGGGAA+TGG | + | tig0029096:4489-4508 | None:intergenic | 45.0% | |
| TTTGCATACGAATGGAGACC+CGG | - | tig0029096:4831-4850 | Msa1440640:intron | 45.0% | |
| TCAATTGCCATCACACAACC+GGG | + | tig0029096:4852-4871 | None:intergenic | 45.0% | |
| CAATTGAATCCAGACCCGAT+GGG | - | tig0029096:4865-4884 | Msa1440640:intron | 45.0% | |
| !! | TATTTTTGCGGGTACCCATC+GGG | + | tig0029096:4882-4901 | None:intergenic | 45.0% |
| !! | GTATTTTTGCGGGTACCCAT+CGG | + | tig0029096:4883-4902 | None:intergenic | 45.0% |
| CCCGCAAAAATACCCACAAT+AGG | - | tig0029096:4890-4909 | Msa1440640:intron | 45.0% | |
| CATCTTTCATGGGTTTGGAC+CGG | - | tig0029096:4925-4944 | Msa1440640:intron | 45.0% | |
| ATCTTTCATGGGTTTGGACC+GGG | - | tig0029096:4926-4945 | Msa1440640:intron | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | + | tig0029096:5136-5155 | None:intergenic | 45.0% | |
| AATTACGTTGCAGCGAACCT+TGG | - | tig0029096:5141-5160 | Msa1440640:intron | 45.0% | |
| ATTACGTTGCAGCGAACCTT+GGG | - | tig0029096:5142-5161 | Msa1440640:intron | 45.0% | |
| AATTTGTCCGGTCCCAACTT+GGG | + | tig0029096:5403-5422 | None:intergenic | 45.0% | |
| AAATTTGTCCGGTCCCAACT+TGG | + | tig0029096:5404-5423 | None:intergenic | 45.0% | |
| ! | TACTGTATTGGCACGGGTAA+GGG | - | tig0029096:5474-5493 | Msa1440640:intron | 45.0% |
| CAATAACCGCTTCATCCTAC+CGG | - | tig0029096:5635-5654 | Msa1440640:CDS | 45.0% | |
| GTTGCTGAGGAAATGGGAAT+TGG | - | tig0029096:6000-6019 | Msa1440640:intron | 45.0% | |
| ATAGGTTTCCAGCCAAAGTC+AGG | - | tig0029096:6033-6052 | Msa1440640:intron | 45.0% | |
| AAGACATGCCTACGATACCA+AGG | - | tig0029096:6061-6080 | Msa1440640:intron | 45.0% | |
| AGACATGCCTACGATACCAA+GGG | - | tig0029096:6062-6081 | Msa1440640:intron | 45.0% | |
| ! | GCCTAAAGTTGGTTCTTCTG+GGG | - | tig0029096:6210-6229 | Msa1440640:intron | 45.0% |
| ACCCCAGAAGAACCAACTTT+AGG | + | tig0029096:6214-6233 | None:intergenic | 45.0% | |
| AACCAGGACATGTACTGTAC+AGG | - | tig0029096:6243-6262 | Msa1440640:intron | 45.0% | |
| CATGTACTGTACAGGTGAGT+CGG | - | tig0029096:6251-6270 | Msa1440640:intron | 45.0% | |
| ATGTACTGTACAGGTGAGTC+GGG | - | tig0029096:6252-6271 | Msa1440640:intron | 45.0% | |
| !! | GTTCTGAAGCTGACATGATC+AGG | - | tig0029096:6359-6378 | Msa1440640:intron | 45.0% |
| GCAAATTCACCCTTCACAGA+TGG | - | tig0029096:6517-6536 | Msa1440640:intron | 45.0% | |
| CTCCTACTGACAAACCCATT+GGG | + | tig0029096:6547-6566 | None:intergenic | 45.0% | |
| TCTCCTACTGACAAACCCAT+TGG | + | tig0029096:6548-6567 | None:intergenic | 45.0% | |
| ATGGGTTTGTCAGTAGGAGA+AGG | - | tig0029096:6548-6567 | Msa1440640:intron | 45.0% | |
| ACACCGGATTTACAGTGGTT+CGG | - | tig0029096:6894-6913 | Msa1440640:CDS | 45.0% | |
| TCCTCTATATTTCCCCTTGG+AGG | - | tig0029096:7233-7252 | Msa1440640:CDS | 45.0% | |
| TCCTCCAAGGGGAAATATAG+AGG | + | tig0029096:7237-7256 | None:intergenic | 45.0% | |
| ! | AGGATCTTTTCTCCTCCAAG+GGG | + | tig0029096:7248-7267 | None:intergenic | 45.0% |
| CAGAGAAATGAACTGGGTCA+GGG | + | tig0029096:7467-7486 | None:intergenic | 45.0% | |
| ACAGAGAAATGAACTGGGTC+AGG | + | tig0029096:7468-7487 | None:intergenic | 45.0% | |
| TTCATCTTTCCTCTAACCGC+TGG | - | tig0029096:7550-7569 | Msa1440640:intron | 45.0% | |
| TACAACGGGTGAGAGAGAAA+GGG | + | tig0029096:7641-7660 | None:intergenic | 45.0% | |
| AGAACATGAGCAGGTACAAC+GGG | + | tig0029096:7655-7674 | None:intergenic | 45.0% | |
| GAGAACATGAGCAGGTACAA+CGG | + | tig0029096:7656-7675 | None:intergenic | 45.0% | |
| TGATGCCACAACAACCATGA+TGG | - | tig0029096:8465-8484 | Msa1440640:intron | 45.0% | |
| GCGTAACTAATGGGGATCAA+TGG | - | tig0029096:8523-8542 | Msa1440640:intron | 45.0% | |
| CTGTACTGGAATGAGCTTCA+AGG | - | tig0029096:9312-9331 | Msa1440640:intron | 45.0% | |
| GGTAATTCACCAGGAATACG+AGG | + | tig0029096:9463-9482 | None:intergenic | 45.0% | |
| ! | TATGCGCTTTACCGGCATTT+TGG | - | tig0029096:9698-9717 | Msa1440640:CDS | 45.0% |
| ! | ATGCGCTTTACCGGCATTTT+GGG | - | tig0029096:9699-9718 | Msa1440640:CDS | 45.0% |
| !! | TTACCGGCATTTTGGGTAAG+TGG | - | tig0029096:9706-9725 | Msa1440640:CDS | 45.0% |
| ATGGTCATTGGCCATCCAAA+AGG | - | tig0029096:9826-9845 | Msa1440640:intron | 45.0% | |
| CATCGTACAATAACCCTACC+TGG | + | tig0029096:9990-10009 | None:intergenic | 45.0% | |
| CCCAGAAGCTTAAGTAAGCT+AGG | - | tig0029096:10122-10141 | Msa1440640:intron | 45.0% | |
| AAAGGGGAAGGAGATAACTG+AGG | - | tig0029096:10272-10291 | Msa1440640:intron | 45.0% | |
| CTCTGGTAGGTTACTGTAAC+TGG | - | tig0029096:10618-10637 | Msa1440640:intron | 45.0% | |
| ATGTTGCCAAGAGGATCGAT+TGG | - | tig0029096:10747-10766 | Msa1440640:intron | 45.0% | |
| !!! | ATACCATGTTTTGGGGAGTC+TGG | - | tig0029096:10942-10961 | Msa1440640:intron | 45.0% |
| TTTCCAGACTCCCCAAAACA+TGG | + | tig0029096:10948-10967 | None:intergenic | 45.0% | |
| ! | AAGGATGGCTTGGAAAGAAG+AGG | - | tig0029096:11149-11168 | Msa1440640:intron | 45.0% |
| CTTGGAAAGAAGAGGCTTCA+TGG | - | tig0029096:11157-11176 | Msa1440640:intron | 45.0% | |
| AATTCCAAAAGCCTCTCAGC+TGG | + | tig0029096:11648-11667 | None:intergenic | 45.0% | |
| !! | CTTTCAAGTTTATGTGGGGG+AGG | - | tig0029096:11749-11768 | Msa1440640:intron | 45.0% |
| !! | AAAAAATAAAATTTAATCTT+CGG | - | tig0029096:4153-4172 | Msa1440640:intron | 5.0% |
| !!! | AATAATATTTCTTTTTAATT+AGG | - | tig0029096:4295-4314 | Msa1440640:intron | 5.0% |
| GTTGGCGGCAGTTTCATAGA+GGG | - | tig0029096:1646-1665 | Msa1440640:intron | 50.0% | |
| TTGGCGGCAGTTTCATAGAG+GGG | - | tig0029096:1647-1666 | Msa1440640:intron | 50.0% | |
| TCGAGAGTTGTTCTTGGTGG+TGG | + | tig0029096:2355-2374 | None:intergenic | 50.0% | |
| GGATCGAGAGTTGTTCTTGG+TGG | + | tig0029096:2358-2377 | None:intergenic | 50.0% | |
| GCATTGCCGAAAGATTTGGC+TGG | - | tig0029096:3385-3404 | Msa1440640:intron | 50.0% | |
| AACATATCACTGGAGGCAGG+TGG | - | tig0029096:3546-3565 | Msa1440640:intron | 50.0% | |
| GGTGGTCAGCTTGAACTTAG+TGG | - | tig0029096:3564-3583 | Msa1440640:intron | 50.0% | |
| CTGATGCAGGGTTTCAAGAG+GGG | + | tig0029096:3592-3611 | None:intergenic | 50.0% | |
| GTCTGATGCAGGGTTTCAAG+AGG | + | tig0029096:3594-3613 | None:intergenic | 50.0% | |
| ATGTGCTACGAGCCTATGAC+TGG | + | tig0029096:3857-3876 | None:intergenic | 50.0% | |
| TCTCCTGATATGTATCGGGC+AGG | - | tig0029096:4180-4199 | Msa1440640:intron | 50.0% | |
| GGGTCTCCATTCGTATGCAA+AGG | + | tig0029096:4832-4851 | None:intergenic | 50.0% | |
| GCAATTGAATCCAGACCCGA+TGG | - | tig0029096:4864-4883 | Msa1440640:intron | 50.0% | |
| TTGTGGGTATTACCCAGACC+CGG | + | tig0029096:4947-4966 | None:intergenic | 50.0% | |
| ! | CTACTGTATTGGCACGGGTA+AGG | - | tig0029096:5473-5492 | Msa1440640:intron | 50.0% |
| TGTACACCGGTAGGATGAAG+CGG | + | tig0029096:5644-5663 | None:intergenic | 50.0% | |
| CTTTGAGTCCTGACTTTGGC+TGG | + | tig0029096:6044-6063 | None:intergenic | 50.0% | |
| CTGACTTTGTGTTGTGGCTC+AGG | - | tig0029096:6159-6178 | Msa1440640:intron | 50.0% | |
| CTGGGGTTGACGTAATAACC+AGG | - | tig0029096:6227-6246 | Msa1440640:intron | 50.0% | |
| CACCTGTACAGTACATGTCC+TGG | + | tig0029096:6248-6267 | None:intergenic | 50.0% | |
| TTGGGCTTCCCATCTGTGAA+GGG | + | tig0029096:6529-6548 | None:intergenic | 50.0% | |
| ATTGGGCTTCCCATCTGTGA+AGG | + | tig0029096:6530-6549 | None:intergenic | 50.0% | |
| TTCACAGATGGGAAGCCCAA+TGG | - | tig0029096:6529-6548 | Msa1440640:intron | 50.0% | |
| TCACAGATGGGAAGCCCAAT+GGG | - | tig0029096:6530-6549 | Msa1440640:intron | 50.0% | |
| ! | AGCCCAATGGGTTTGTCAGT+AGG | - | tig0029096:6542-6561 | Msa1440640:intron | 50.0% |
| ATGAGCTTAATCCACTCCCG+AGG | - | tig0029096:6933-6952 | Msa1440640:intron | 50.0% | |
| GGTGTTTAATTCCTCGGGAG+TGG | + | tig0029096:6947-6966 | None:intergenic | 50.0% | |
| ACCTATATTGTACCCAGGGG+CGG | - | tig0029096:7334-7353 | Msa1440640:intron | 50.0% | |
| GGTGAGAGAGAAAGGGAGAA+GGG | + | tig0029096:7634-7653 | None:intergenic | 50.0% | |
| GTACAACGGGTGAGAGAGAA+AGG | + | tig0029096:7642-7661 | None:intergenic | 50.0% | |
| CAATCTCCAGTTTGGGAAGG+AGG | + | tig0029096:7725-7744 | None:intergenic | 50.0% | |
| CAGACCCAACCCTAATGCAT+TGG | + | tig0029096:8127-8146 | None:intergenic | 50.0% | |
| GGAAAGCTTCCTCGTATTCC+TGG | - | tig0029096:9451-9470 | Msa1440640:intron | 50.0% | |
| !! | ATGGAGATGAGAGGTGCTGA+CGG | - | tig0029096:9658-9677 | Msa1440640:CDS | 50.0% |
| GCCCATGCTTCAAGCTCATA+TGG | + | tig0029096:10205-10224 | None:intergenic | 50.0% | |
| GGCAAAGTGATCAAGGCAAG+AGG | + | tig0029096:10303-10322 | None:intergenic | 50.0% | |
| GGTCTAAAGACACCATTCCG+AGG | - | tig0029096:10639-10658 | Msa1440640:intron | 50.0% | |
| CTAAAGACACCATTCCGAGG+TGG | - | tig0029096:10642-10661 | Msa1440640:intron | 50.0% | |
| TTCAGCAAACCACCTCGGAA+TGG | + | tig0029096:10654-10673 | None:intergenic | 50.0% | |
| CATGCTTCAGCAAACCACCT+CGG | + | tig0029096:10659-10678 | None:intergenic | 50.0% | |
| GCTGAAGCATGTTGCTGAAG+AGG | - | tig0029096:10668-10687 | Msa1440640:intron | 50.0% | |
| !! | CATTAATCCGTCGTTGGCTC+CGG | + | tig0029096:10802-10821 | None:intergenic | 50.0% |
| !! | CATTATCCGTTGTTGGCTCC+CGG | + | tig0029096:10835-10854 | None:intergenic | 50.0% |
| GGATCGGAAGTAGATCATCC+AGG | + | tig0029096:10897-10916 | None:intergenic | 50.0% | |
| AGGTGGCCAGAACAGGTAAT+GGG | - | tig0029096:11207-11226 | Msa1440640:intron | 50.0% | |
| GGTTGGCGGCAGTTTCATAG+AGG | - | tig0029096:1645-1664 | Msa1440640:intron | 55.0% | |
| GGGGGATCGAGAGTTGTTCT+TGG | + | tig0029096:2361-2380 | None:intergenic | 55.0% | |
| ACATCCGGGTTCGACGTTGT+GGG | + | tig0029096:2381-2400 | None:intergenic | 55.0% | |
| CCAACGGTGGTATCACATCC+GGG | + | tig0029096:2395-2414 | None:intergenic | 55.0% | |
| CCCAACGGTGGTATCACATC+CGG | + | tig0029096:2396-2415 | None:intergenic | 55.0% | |
| CCGGATGTGATACCACCGTT+GGG | - | tig0029096:2393-2412 | Msa1440640:intron | 55.0% | |
| TACCACCGTTGGGCTTTCTG+TGG | - | tig0029096:2403-2422 | Msa1440640:intron | 55.0% | |
| ACCACCGTTGGGCTTTCTGT+GGG | - | tig0029096:2404-2423 | Msa1440640:intron | 55.0% | |
| ACGACATTCTAGCCCGTGCT+TGG | - | tig0029096:2556-2575 | Msa1440640:intron | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | - | tig0029096:2561-2580 | Msa1440640:intron | 55.0% | |
| !! | ATTGGGGCAGGTATCGATGC+AGG | - | tig0029096:4072-4091 | Msa1440640:intron | 55.0% |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | tig0029096:4202-4221 | Msa1440640:intron | 55.0% |
| TATCGGTGCAGGATACGCAG+GGG | - | tig0029096:4203-4222 | Msa1440640:intron | 55.0% | |
| ATGGAGACCCGGTTGTGTGA+TGG | - | tig0029096:4842-4861 | Msa1440640:intron | 55.0% | |
| ! | ACATTGGCCCAAGTTGGGAC+CGG | - | tig0029096:5393-5412 | Msa1440640:intron | 55.0% |
| ATATGCGGGGTTGTGGGACT+GGG | + | tig0029096:5510-5529 | None:intergenic | 55.0% | |
| TATATGCGGGGTTGTGGGAC+TGG | + | tig0029096:5511-5530 | None:intergenic | 55.0% | |
| GCGCCGAACCACTGTAAATC+CGG | + | tig0029096:6900-6919 | None:intergenic | 55.0% | |
| TCCGCCCCTGGGTACAATAT+AGG | + | tig0029096:7338-7357 | None:intergenic | 55.0% | |
| GCGGAGCTACATGCAACTGA+GGG | - | tig0029096:7353-7372 | Msa1440640:intron | 55.0% | |
| CGGAGCTACATGCAACTGAG+GGG | - | tig0029096:7354-7373 | Msa1440640:intron | 55.0% | |
| ATCTCCGCGCACAACTGACA+CGG | - | tig0029096:7600-7619 | Msa1440640:intron | 55.0% | |
| GAGAGAGAAAGGGAGAAGGG+TGG | + | tig0029096:7631-7650 | None:intergenic | 55.0% | |
| GGGTGAGAGAGAAAGGGAGA+AGG | + | tig0029096:7635-7654 | None:intergenic | 55.0% | |
| CAGTTTGGGAAGGAGGAGGA+CGG | + | tig0029096:7718-7737 | None:intergenic | 55.0% | |
| TCTCCAGTTTGGGAAGGAGG+AGG | + | tig0029096:7722-7741 | None:intergenic | 55.0% | |
| AAGTTTGAACCCCCTGACCC+AGG | - | tig0029096:8576-8595 | Msa1440640:intron | 55.0% | |
| GTACAATCAGTGGCGTTGCC+AGG | + | tig0029096:8604-8623 | None:intergenic | 55.0% | |
| CCGCCACTTACCCAAAATGC+CGG | + | tig0029096:9712-9731 | None:intergenic | 55.0% | |
| !! | CCGGCATTTTGGGTAAGTGG+CGG | - | tig0029096:9709-9728 | Msa1440640:CDS | 55.0% |
| AGTCTACCGGGAGCCAACAA+CGG | - | tig0029096:10826-10845 | Msa1440640:intron | 55.0% | |
| CGGGAGCCAACAACGGATAA+TGG | - | tig0029096:10833-10852 | Msa1440640:intron | 55.0% | |
| GAGGTGGCCAGAACAGGTAA+TGG | - | tig0029096:11206-11225 | Msa1440640:intron | 55.0% | |
| ! | CACTCCAGCTGAGAGGCTTT+TGG | - | tig0029096:11641-11660 | Msa1440640:intron | 55.0% |
| ATCCCCCACAACGTCGAACC+CGG | - | tig0029096:2374-2393 | Msa1440640:intron | 60.0% | |
| ATCCGGGTTCGACGTTGTGG+GGG | + | tig0029096:2379-2398 | None:intergenic | 60.0% | |
| CATCCGGGTTCGACGTTGTG+GGG | + | tig0029096:2380-2399 | None:intergenic | 60.0% | |
| CACATCCGGGTTCGACGTTG+TGG | + | tig0029096:2382-2401 | None:intergenic | 60.0% | |
| CCCGGATGTGATACCACCGT+TGG | - | tig0029096:2392-2411 | Msa1440640:intron | 60.0% | |
| TCCCACAGAAAGCCCAACGG+TGG | + | tig0029096:2408-2427 | None:intergenic | 60.0% | |
| GGGTCCCACAGAAAGCCCAA+CGG | + | tig0029096:2411-2430 | None:intergenic | 60.0% | |
| TTCTAGCCCGTGCTTGGCAC+GGG | - | tig0029096:2562-2581 | Msa1440640:intron | 60.0% | |
| ATGGACACCCGTGCCAAGCA+CGG | + | tig0029096:2572-2591 | None:intergenic | 60.0% | |
| !! | TATCGGGCAGGTATCGGTGC+AGG | - | tig0029096:4192-4211 | Msa1440640:intron | 60.0% |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | tig0029096:4201-4220 | Msa1440640:intron | 60.0% |
| TCATGGGTTTGGACCGGGTC+TGG | - | tig0029096:4931-4950 | Msa1440640:intron | 60.0% | |
| CATGGGTTTGGACCGGGTCT+GGG | - | tig0029096:4932-4951 | Msa1440640:intron | 60.0% | |
| TTGCATGTAGCTCCGCCCCT+GGG | + | tig0029096:7349-7368 | None:intergenic | 60.0% | |
| GGCGGAGCTACATGCAACTG+AGG | - | tig0029096:7352-7371 | Msa1440640:intron | 60.0% | |
| GGGGATTCAAGTGAACCCCC+TGG | - | tig0029096:7373-7392 | Msa1440640:intron | 60.0% | |
| AGGTTGCTGCCAGCGGTTAG+AGG | + | tig0029096:7562-7581 | None:intergenic | 60.0% | |
| AACCTCCCAGGTACCACCAC+CGG | - | tig0029096:7577-7596 | Msa1440640:intron | 60.0% | |
| ! | GAGATCCGGTGGTGGTACCT+GGG | + | tig0029096:7585-7604 | None:intergenic | 60.0% |
| GTCAGTTGTGCGCGGAGATC+CGG | + | tig0029096:7599-7618 | None:intergenic | 60.0% | |
| GCGTGAGGGAGAACATGAGC+AGG | + | tig0029096:7664-7683 | None:intergenic | 60.0% | |
| CGTCCTCCTCCTTCCCAAAC+TGG | - | tig0029096:7716-7735 | Msa1440640:intron | 60.0% | |
| TTGCCAGGAACCTGGGTCAG+GGG | + | tig0029096:8589-8608 | None:intergenic | 60.0% | |
| GTTGCCAGGAACCTGGGTCA+GGG | + | tig0029096:8590-8609 | None:intergenic | 60.0% | |
| AGTGGCGTTGCCAGGAACCT+GGG | + | tig0029096:8596-8615 | None:intergenic | 60.0% | |
| !! | GAGATGAGAGGTGCTGACGG+AGG | - | tig0029096:9661-9680 | Msa1440640:CDS | 60.0% |
| GTAGCTGAGGTGGCCAGAAC+AGG | - | tig0029096:11200-11219 | Msa1440640:intron | 60.0% | |
| CTCTCAGCTGGAGTGACACC+TGG | + | tig0029096:11636-11655 | None:intergenic | 60.0% | |
| !! | CAGGTGTCACTCCAGCTGAG+AGG | - | tig0029096:11634-11653 | Msa1440640:intron | 60.0% |
| TGGACACCCGTGCCAAGCAC+GGG | + | tig0029096:2571-2590 | None:intergenic | 65.0% | |
| TTGCGGGTACCCATCGGGTC+TGG | + | tig0029096:4877-4896 | None:intergenic | 65.0% | |
| GTTGCATGTAGCTCCGCCCC+TGG | + | tig0029096:7350-7369 | None:intergenic | 65.0% | |
| ACCTGGGAGGTTGCTGCCAG+CGG | + | tig0029096:7569-7588 | None:intergenic | 65.0% | |
| ! | ATCCGGTGGTGGTACCTGGG+AGG | + | tig0029096:7582-7601 | None:intergenic | 65.0% |
| ! | GGAGATCCGGTGGTGGTACC+TGG | + | tig0029096:7586-7605 | None:intergenic | 65.0% |
| AGTTGTGCGCGGAGATCCGG+TGG | + | tig0029096:7596-7615 | None:intergenic | 65.0% | |
| GCGTCCGTGTCAGTTGTGCG+CGG | + | tig0029096:7607-7626 | None:intergenic | 65.0% | |
| GGAAGGAGGAGGACGGCGTT+CGG | + | tig0029096:7711-7730 | None:intergenic | 65.0% | |
| AACCCCCTGACCCAGGTTCC+TGG | - | tig0029096:8583-8602 | Msa1440640:intron | 65.0% | |
| TGCCAGGAACCTGGGTCAGG+GGG | + | tig0029096:8588-8607 | None:intergenic | 65.0% | |
| CGTTGCCAGGAACCTGGGTC+AGG | + | tig0029096:8591-8610 | None:intergenic | 65.0% | |
| CAGTGGCGTTGCCAGGAACC+TGG | + | tig0029096:8597-8616 | None:intergenic | 65.0% | |
| TTGAGAGTCCCGCAGAGCGC+CGG | - | tig0029096:10780-10799 | Msa1440640:intron | 65.0% | |
| ACCGCTGGCAGCAACCTCCC+AGG | - | tig0029096:7565-7584 | Msa1440640:intron | 70.0% | |
| TGTGCGCGGAGATCCGGTGG+TGG | + | tig0029096:7593-7612 | None:intergenic | 70.0% | |
| AGGAGGAGGACGGCGTTCGG+CGG | + | tig0029096:7708-7727 | None:intergenic | 70.0% | |
| !! | TCGTTGGCTCCGGCGCTCTG+CGG | + | tig0029096:10792-10811 | None:intergenic | 70.0% |
| !! | CAGAGCGCCGGAGCCAACGA+CGG | - | tig0029096:10792-10811 | Msa1440640:intron | 70.0% |
| !! | CGTTGGCTCCGGCGCTCTGC+GGG | + | tig0029096:10791-10810 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029096 | gene | 1395 | 11899 | 1395 | ID=Msa1440640;Name=Msa1440640 |
| tig0029096 | mRNA | 1395 | 11899 | 1395 | ID=Msa1440640-mRNA-1;Parent=Msa1440640;Name=Msa1440640-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.66|0.62|0.87|1|1|16|174|483 |
| tig0029096 | exon | 1395 | 1657 | 1395 | ID=Msa1440640-mRNA-1:exon:12376;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 2073 | 2142 | 2073 | ID=Msa1440640-mRNA-1:exon:12375;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 2587 | 2667 | 2587 | ID=Msa1440640-mRNA-1:exon:12374;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 3211 | 3303 | 3211 | ID=Msa1440640-mRNA-1:exon:12373;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 3574 | 3654 | 3574 | ID=Msa1440640-mRNA-1:exon:12372;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 3766 | 3855 | 3766 | ID=Msa1440640-mRNA-1:exon:12371;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 3961 | 4054 | 3961 | ID=Msa1440640-mRNA-1:exon:12370;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 5551 | 5718 | 5551 | ID=Msa1440640-mRNA-1:exon:12369;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 6563 | 6631 | 6563 | ID=Msa1440640-mRNA-1:exon:12368;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 6725 | 6795 | 6725 | ID=Msa1440640-mRNA-1:exon:12367;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 6883 | 6951 | 6883 | ID=Msa1440640-mRNA-1:exon:12366;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 7030 | 7113 | 7030 | ID=Msa1440640-mRNA-1:exon:12365;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 7211 | 7303 | 7211 | ID=Msa1440640-mRNA-1:exon:12364;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 9650 | 9757 | 9650 | ID=Msa1440640-mRNA-1:exon:12363;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 9845 | 9995 | 9845 | ID=Msa1440640-mRNA-1:exon:12362;Parent=Msa1440640-mRNA-1 |
| tig0029096 | exon | 11859 | 11899 | 11859 | ID=Msa1440640-mRNA-1:exon:12361;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 11859 | 11899 | 11859 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 9845 | 9995 | 9845 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 9650 | 9757 | 9650 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 7211 | 7303 | 7211 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 7030 | 7113 | 7030 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 6883 | 6951 | 6883 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 6725 | 6795 | 6725 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 6563 | 6631 | 6563 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 5551 | 5718 | 5551 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 3961 | 4054 | 3961 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 3766 | 3855 | 3766 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 3574 | 3654 | 3574 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 3211 | 3303 | 3211 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 2587 | 2667 | 2587 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 2073 | 2142 | 2073 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | CDS | 1569 | 1657 | 1569 | ID=Msa1440640-mRNA-1:cds;Parent=Msa1440640-mRNA-1 |
| tig0029096 | three_prime_UTR | 1395 | 1568 | 1395 | ID=Msa1440640-mRNA-1:three_prime_utr;Parent=Msa1440640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
