Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441120 | sp|A2RV01|DPH6_DANRE | 57.977 | 257 | 105 | 3 | 1 | 256 | 1 | 255 | 8.01e-99 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441120 | G7KWG3 | 97.027 | 740 | 21 | 1 | 1 | 740 | 1 | 739 | 0.0 | 1481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0622120 | Msa1441120 | 0.815794 | 7.700498e-52 | -8.615850e-47 |
| Msa1304940 | Msa1441120 | 0.805449 | 1.327703e-49 | -8.615850e-47 |
| Msa0342820 | Msa1441120 | 0.941210 | 6.179949e-101 | -8.615850e-47 |
| Msa1128150 | Msa1441120 | 0.984390 | 2.015493e-160 | -8.615850e-47 |
| Msa0526020 | Msa1441120 | 0.812462 | 4.189001e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441120 | MtrunA17_Chr7g0271441 | 97.027 | 740 | 21 | 1 | 1 | 740 | 1 | 739 | 0.0 | 1481 |
| Msa1441120 | MtrunA17_Chr7g0253941 | 63.934 | 61 | 21 | 1 | 661 | 720 | 12 | 72 | 5.12e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441120 | AT3G04480.1 | 58.957 | 748 | 267 | 8 | 1 | 739 | 1 | 717 | 0.0 | 867 |
Find 179 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATTTCTATGCAGAATT+TGG | 0.077906 | tig0029230:-16564 | Msa1441120:CDS |
| GTTCAAAGACATCATGTTAT+TGG | 0.176771 | tig0029230:-14193 | Msa1441120:CDS |
| GATTAATTCATAAAACTAAA+AGG | 0.181260 | tig0029230:+13055 | Msa1441120:intergenic |
| CAACTAGCAGCGTTTGATTT+TGG | 0.194281 | tig0029230:-16236 | Msa1441120:CDS |
| TGCAAATAATAAAGGTAAAA+AGG | 0.214470 | tig0029230:-16030 | Msa1441120:CDS |
| TTCAAAGACATCATGTTATT+GGG | 0.232969 | tig0029230:-14192 | Msa1441120:CDS |
| AACTGCTCCATTCGTGATTT+AGG | 0.239376 | tig0029230:+14008 | Msa1441120:intergenic |
| AACAAGGACATAAAGGAATA+TGG | 0.243697 | tig0029230:+14863 | Msa1441120:intergenic |
| AGTGCAACCACCTTCATCTT+TGG | 0.256669 | tig0029230:+18616 | Msa1441120:intergenic |
| ATCTTGAGCTTGGTTATAAA+AGG | 0.259616 | tig0029230:-18378 | Msa1441120:CDS |
| ACTTCACATGGCTGGTCAAC+TGG | 0.264296 | tig0029230:-15141 | Msa1441120:CDS |
| TTGTTTCTTTGGCGTACTTA+TGG | 0.266450 | tig0029230:-18210 | Msa1441120:CDS |
| TATAATGGCACATAGCTTTC+CGG | 0.268584 | tig0029230:+14118 | Msa1441120:intergenic |
| TCTTTACCCAAGTGCTTTGC+AGG | 0.282813 | tig0029230:+17229 | Msa1441120:intergenic |
| TTCAACATAGTTCCTGTTAC+AGG | 0.283682 | tig0029230:-13356 | Msa1441120:CDS |
| TAGAGCATATGTTGAAGTTT+TGG | 0.286575 | tig0029230:-16054 | Msa1441120:CDS |
| ACTGACATTTGAAGGCTTAC+TGG | 0.289935 | tig0029230:+13464 | Msa1441120:intergenic |
| GAGGTTAGGTCTTGTTTCTT+TGG | 0.294199 | tig0029230:-18221 | Msa1441120:CDS |
| GTGCAACCACCTTCATCTTT+GGG | 0.320368 | tig0029230:+18617 | Msa1441120:intergenic |
| TTTCTTTATAGCAGATTTGC+AGG | 0.320922 | tig0029230:-16294 | Msa1441120:intron |
| TCTGTTACTGCTGTGTGTTC+TGG | 0.321993 | tig0029230:-18292 | Msa1441120:CDS |
| AATGAAGATAGCTGAATTAC+AGG | 0.323338 | tig0029230:-14913 | Msa1441120:CDS |
| CTCATGTCATGCAGAGTTTG+AGG | 0.332427 | tig0029230:-13496 | Msa1441120:intron |
| GCCAAGGTCTGATAAAATTC+CGG | 0.337952 | tig0029230:-13084 | Msa1441120:three_prime_UTR |
| CTTTGCCTGGGAAGATATAA+TGG | 0.342710 | tig0029230:-13937 | Msa1441120:intron |
| CCAAGGTCTGATAAAATTCC+GGG | 0.344911 | tig0029230:-13083 | Msa1441120:three_prime_UTR |
| CATCAAATATGCTGAATGTA+TGG | 0.345363 | tig0029230:-18443 | Msa1441120:CDS |
| TGTAGTGACCTGCGAATTAC+TGG | 0.346328 | tig0029230:-13303 | Msa1441120:CDS |
| CAAGGTAGCTGCCATGGGTT+TGG | 0.353464 | tig0029230:-17254 | Msa1441120:intron |
| GCAGGTCACTACATCATCTA+TGG | 0.353750 | tig0029230:+13313 | Msa1441120:intergenic |
| TTATGTTCTACGACATCAAT+TGG | 0.356178 | tig0029230:+16470 | Msa1441120:intergenic |
| ATTGTCAATCACAAGTGTTC+TGG | 0.360796 | tig0029230:-14096 | Msa1441120:CDS |
| GAGATTTCTATGCAGAATTT+GGG | 0.361430 | tig0029230:-16563 | Msa1441120:CDS |
| AGTCAGCAAAAGAACCTAAA+TGG | 0.364428 | tig0029230:+13153 | Msa1441120:intergenic |
| AAAATGTAATTTATATAGAT+AGG | 0.366053 | tig0029230:-12987 | Msa1441120:three_prime_UTR |
| CTTCGAGATGGTACGCCAAA+TGG | 0.371534 | tig0029230:+16113 | Msa1441120:intergenic |
| TGGAGGCCCTGGGGTTGAAC+TGG | 0.371864 | tig0029230:-15087 | Msa1441120:CDS |
| GAAAGTGTTTGTTCGAGGTT+AGG | 0.378559 | tig0029230:-18235 | Msa1441120:CDS |
| GTATGGGATTGCCATTGTTC+AGG | 0.384335 | tig0029230:-18426 | Msa1441120:CDS |
| ACTTGTGATTGACAATATAA+TGG | 0.390583 | tig0029230:+14103 | Msa1441120:intergenic |
| TAATAGATAACGACTTTGCC+TGG | 0.391497 | tig0029230:-13950 | Msa1441120:CDS |
| ATCTTTGCAGTGGAGGCCCT+GGG | 0.393414 | tig0029230:-15097 | Msa1441120:CDS |
| TTTCAGAAATGTGTGATTCC+CGG | 0.397759 | tig0029230:-14137 | Msa1441120:CDS |
| ATAATGGCACATAGCTTTCC+GGG | 0.398283 | tig0029230:+14119 | Msa1441120:intergenic |
| CAAATAGGATCAAATGGAAT+AGG | 0.400615 | tig0029230:-13186 | Msa1441120:three_prime_UTR |
| AACCGCCCAGCACCTGTAAC+AGG | 0.403060 | tig0029230:+13344 | Msa1441120:intergenic |
| CCCTGGGGTTGAACTGGAAC+AGG | 0.404068 | tig0029230:-15081 | Msa1441120:CDS |
| CTGACATTTGAAGGCTTACT+GGG | 0.405556 | tig0029230:+13465 | Msa1441120:intergenic |
| ATCTGCAATATTCAGATGTA+TGG | 0.405934 | tig0029230:-13029 | Msa1441120:three_prime_UTR |
| ATCCTTGCTCCTCAATGAAA+TGG | 0.408402 | tig0029230:-18176 | Msa1441120:intron |
| AGTTGGGCACCTAGCTGCAT+TGG | 0.410595 | tig0029230:-15984 | Msa1441120:CDS |
| AAATATCAAATAGGATCAAA+TGG | 0.414173 | tig0029230:-13192 | Msa1441120:three_prime_UTR |
| ACACATTCTCCATGTGTTGC+TGG | 0.414372 | tig0029230:-16418 | Msa1441120:CDS |
| GTTGGGCACCTAGCTGCATT+GGG | 0.421020 | tig0029230:-15983 | Msa1441120:CDS |
| ATAGTTCCTGTTACAGGTGC+TGG | 0.423020 | tig0029230:-13350 | Msa1441120:CDS |
| TTGTTCCTGATCTACCAAAA+AGG | 0.423514 | tig0029230:-14845 | Msa1441120:intron |
| GCCTGTTCCAGTTCAACCCC+AGG | 0.425806 | tig0029230:+15080 | Msa1441120:intergenic |
| GGTCGTTGCATCGTAATTGT+TGG | 0.427586 | tig0029230:-18661 | Msa1441120:five_prime_UTR |
| TCAGCTCCACTGACATTTGA+AGG | 0.427589 | tig0029230:+13456 | Msa1441120:intergenic |
| GGAATAAATGTTTGCGGAGA+AGG | 0.429128 | tig0029230:-17035 | Msa1441120:CDS |
| ACACAGGAGAGGTGCCCATT+TGG | 0.429574 | tig0029230:-16128 | Msa1441120:CDS |
| GATCAGGAACAAGGACATAA+AGG | 0.430601 | tig0029230:+14856 | Msa1441120:intergenic |
| GCCTCCACTGCAAAGATTCA+TGG | 0.441436 | tig0029230:+15103 | Msa1441120:intergenic |
| GGTCTTGACCAGATTGCAAA+TGG | 0.443668 | tig0029230:-17688 | Msa1441120:intron |
| TGTAGGAGTCCTTCATCCCT+TGG | 0.460859 | tig0029230:-16645 | Msa1441120:CDS |
| AATCTTTGCAGTGGAGGCCC+TGG | 0.461556 | tig0029230:-15098 | Msa1441120:CDS |
| TGAACAAGATCTTTCCATGA+TGG | 0.463618 | tig0029230:+14211 | Msa1441120:intergenic |
| TGTGCAGAGTATTTCTAGTT+GGG | 0.464904 | tig0029230:-16000 | Msa1441120:CDS |
| TTTGGATCCTGCAAAGCACT+TGG | 0.464980 | tig0029230:-17236 | Msa1441120:CDS |
| TACCGGCGCTGCTGCTCTAC+CGG | 0.465519 | tig0029230:-18682 | Msa1441120:five_prime_UTR |
| GTGTCGAAAGTGTTTGTTCG+AGG | 0.469835 | tig0029230:-18240 | Msa1441120:CDS |
| AGCTACATGTATCAAACTGT+TGG | 0.472858 | tig0029230:-18478 | Msa1441120:CDS |
| CTTCACATGGCTGGTCAACT+GGG | 0.476586 | tig0029230:-15140 | Msa1441120:CDS |
| TTGTTCAGGAGGAGAATTCA+AGG | 0.480152 | tig0029230:-18412 | Msa1441120:CDS |
| AACAATTACGATGCAACGAC+CGG | 0.480388 | tig0029230:+18663 | Msa1441120:intergenic |
| TTATCAGTAGGCAAAGAATC+AGG | 0.480646 | tig0029230:+14059 | Msa1441120:intergenic |
| TGAAATGCCTCTACTTGAGA+TGG | 0.485639 | tig0029230:-16084 | Msa1441120:CDS |
| TGCGTGTTTACCTGGCTGTA+TGG | 0.486725 | tig0029230:+15960 | Msa1441120:intergenic |
| AATGAAATGCCAAGGGATGA+AGG | 0.487570 | tig0029230:+16636 | Msa1441120:intergenic |
| ATGTGCAGAGTATTTCTAGT+TGG | 0.487963 | tig0029230:-16001 | Msa1441120:CDS |
| TCATCAAAGCATCTTGAGCT+TGG | 0.488713 | tig0029230:-18388 | Msa1441120:CDS |
| ACCATCCTCGACATAAAGAA+TGG | 0.489983 | tig0029230:+14253 | Msa1441120:intergenic |
| CTGTATGGCCCAATGCAGCT+AGG | 0.492717 | tig0029230:+15975 | Msa1441120:intergenic |
| TTCGAGATGGTACGCCAAAT+GGG | 0.497265 | tig0029230:+16114 | Msa1441120:intergenic |
| ATTTCACAAGGTAGCTGCCA+TGG | 0.497566 | tig0029230:-17260 | Msa1441120:intron |
| ATTAATTCATAAAACTAAAA+GGG | 0.499383 | tig0029230:+13056 | Msa1441120:intergenic |
| TTAATGCAACAAATTTGAAA+AGG | 0.500354 | tig0029230:+13234 | Msa1441120:intergenic |
| ACAGGAACTATGTTGAAGAT+TGG | 0.500598 | tig0029230:+13362 | Msa1441120:intergenic |
| AAGGGATGAAGGACTCCTAC+AGG | 0.504490 | tig0029230:+16647 | Msa1441120:intergenic |
| GGGGTTTCAAGCACGAAAGT+TGG | 0.505130 | tig0029230:-14172 | Msa1441120:CDS |
| TATTCATGTCATCGATGTAA+AGG | 0.505177 | tig0029230:+16189 | Msa1441120:intergenic |
| ACAAGGACATAAAGGAATAT+GGG | 0.507989 | tig0029230:+14864 | Msa1441120:intergenic |
| GACCGGTAGAGCAGCAGCGC+CGG | 0.511017 | tig0029230:+18680 | Msa1441120:intergenic |
| TCGCCAAGGCGACGATCTGA+TGG | 0.511188 | tig0029230:+18539 | Msa1441120:intergenic |
| CTCAACTTCCCCAAAGATGA+AGG | 0.516319 | tig0029230:-18626 | Msa1441120:exon |
| TCGTCGACGGAATCATCAAC+TGG | 0.516484 | tig0029230:+18508 | Msa1441120:intergenic |
| GCTACATGTATCAAACTGTT+GGG | 0.517649 | tig0029230:-18477 | Msa1441120:CDS |
| AAGGACTCCTACAGGAGCTA+TGG | 0.519302 | tig0029230:+16655 | Msa1441120:intergenic |
| ACTGATAATGTCAATAATGA+TGG | 0.523248 | tig0029230:-14044 | Msa1441120:CDS |
| ATCAAATATGCTGAATGTAT+GGG | 0.523394 | tig0029230:-18442 | Msa1441120:CDS |
| TCCTACAGGAGCTATGGAAT+CGG | 0.524150 | tig0029230:+16661 | Msa1441120:intergenic |
| TACCATTTCATTGAGGAGCA+AGG | 0.525232 | tig0029230:+18174 | Msa1441120:intergenic |
| CTGCAAAGATTCATGGTAGG+AGG | 0.525537 | tig0029230:+15110 | Msa1441120:intergenic |
| ATAAATGTTTGCGGAGAAGG+AGG | 0.529494 | tig0029230:-17032 | Msa1441120:CDS |
| TTTCACAAGGTAGCTGCCAT+GGG | 0.529657 | tig0029230:-17259 | Msa1441120:intron |
| CTGCATTGGGCCATACAGCC+AGG | 0.530190 | tig0029230:-15970 | Msa1441120:intron |
| TTCTCTACCTAAATCACGAA+TGG | 0.531538 | tig0029230:-14015 | Msa1441120:CDS |
| CGGCCATCAGATCGTCGCCT+TGG | 0.532989 | tig0029230:-18542 | Msa1441120:CDS |
| AAATGTTTGCGGAGAAGGAG+GGG | 0.534898 | tig0029230:-17030 | Msa1441120:CDS |
| ATGATGAAGTGTATTCAATA+CGG | 0.538744 | tig0029230:-18562 | Msa1441120:CDS |
| GTAATCAAGAGGCTTGCATA+AGG | 0.539542 | tig0029230:+16499 | Msa1441120:intergenic |
| CCCATTCTTTATGTCGAGGA+TGG | 0.540339 | tig0029230:-14254 | Msa1441120:CDS |
| AAGGTGGTTGCACTTGTTAG+CGG | 0.540879 | tig0029230:-18607 | Msa1441120:CDS |
| AAACAACAAAAGTGAGATAC+CGG | 0.541190 | tig0029230:-18699 | Msa1441120:five_prime_UTR |
| CAGCTATCTTCATTTGTCTG+AGG | 0.547119 | tig0029230:+14922 | Msa1441120:intergenic |
| TAAAACTAAAAGGGTAGCCC+CGG | 0.547788 | tig0029230:+13065 | Msa1441120:intergenic |
| GGCATTTCATTTAGAAAACA+AGG | 0.548751 | tig0029230:-16624 | Msa1441120:CDS |
| CCATCCTCGACATAAAGAAT+GGG | 0.549132 | tig0029230:+14254 | Msa1441120:intergenic |
| AATAGATAACGACTTTGCCT+GGG | 0.551068 | tig0029230:-13949 | Msa1441120:CDS |
| AACCAATTACCATTTCATTG+AGG | 0.552375 | tig0029230:+18167 | Msa1441120:intergenic |
| CTTGGTTATAAAAGGACTCA+AGG | 0.554072 | tig0029230:-18370 | Msa1441120:CDS |
| TCAATATCGACATCTGCAGT+TGG | 0.554099 | tig0029230:-15017 | Msa1441120:CDS |
| TAAATGTTTGCGGAGAAGGA+GGG | 0.567566 | tig0029230:-17031 | Msa1441120:CDS |
| TTTCTGAGCCAGTAATTCGC+AGG | 0.569535 | tig0029230:+13295 | Msa1441120:intergenic |
| CCTGTTCCAGTTCAACCCCA+GGG | 0.570735 | tig0029230:+15081 | Msa1441120:intergenic |
| TGTAGAAATTGAGACCATCA+TGG | 0.571539 | tig0029230:-14225 | Msa1441120:CDS |
| TAGTTCCTGTTACAGGTGCT+GGG | 0.572397 | tig0029230:-13349 | Msa1441120:CDS |
| TCAAAGACATCATGTTATTG+GGG | 0.575374 | tig0029230:-14191 | Msa1441120:CDS |
| CTAAAATCCATCTCAAGTAG+AGG | 0.575649 | tig0029230:+16077 | Msa1441120:intergenic |
| TCATATGGAATAAATGTTTG+CGG | 0.578050 | tig0029230:-17041 | Msa1441120:CDS |
| AACTTTCTCAAATAAGTCAG+AGG | 0.579904 | tig0029230:-13403 | Msa1441120:CDS |
| TGCAACCACCTTCATCTTTG+GGG | 0.580348 | tig0029230:+18618 | Msa1441120:intergenic |
| AGAACACACAGCAGTAACAG+AGG | 0.585294 | tig0029230:+18294 | Msa1441120:intergenic |
| CTTGCAGGCAACCTTGCATG+AGG | 0.585355 | tig0029230:-15168 | Msa1441120:intron |
| TTGGATCCTGCAAAGCACTT+GGG | 0.586975 | tig0029230:-17235 | Msa1441120:CDS |
| ACCATGAATCTTTGCAGTGG+AGG | 0.594200 | tig0029230:-15104 | Msa1441120:CDS |
| ACTAACCATTATATCTTCCC+AGG | 0.594401 | tig0029230:+13932 | Msa1441120:intergenic |
| TCATTATTGACATTATCAGT+AGG | 0.594528 | tig0029230:+14047 | Msa1441120:intergenic |
| ATCTTGCAACCAGCAACACA+TGG | 0.595357 | tig0029230:+16409 | Msa1441120:intergenic |
| GAGGGTATACTTCACATGGC+TGG | 0.597033 | tig0029230:-15149 | Msa1441120:CDS |
| TGCAAAGATTCATGGTAGGA+GGG | 0.600755 | tig0029230:+15111 | Msa1441120:intergenic |
| TGGGATTGCCATTGTTCAGG+AGG | 0.601863 | tig0029230:-18423 | Msa1441120:CDS |
| AGGAACTTACAATAAAGAGC+GGG | 0.603286 | tig0029230:+16982 | Msa1441120:intergenic |
| TGAATTCTCCTCCTGAACAA+TGG | 0.603435 | tig0029230:+18415 | Msa1441120:intergenic |
| TTCTCAAATAAGTCAGAGGG+AGG | 0.606859 | tig0029230:-13399 | Msa1441120:CDS |
| ATTGGATAAGTGTAATCAAG+AGG | 0.608522 | tig0029230:+16488 | Msa1441120:intergenic |
| ATTTCAACTGTACTTCGAGA+TGG | 0.609688 | tig0029230:+16101 | Msa1441120:intergenic |
| AAAAGTGCATTGCAGAACAT+AGG | 0.614047 | tig0029230:+13428 | Msa1441120:intergenic |
| GTAGCTATCGAGTTCGTCGA+CGG | 0.614965 | tig0029230:+18495 | Msa1441120:intergenic |
| GAAGCCCATTCTTTATGTCG+AGG | 0.615387 | tig0029230:-14258 | Msa1441120:CDS |
| ACTTTCTCAAATAAGTCAGA+GGG | 0.618722 | tig0029230:-13402 | Msa1441120:CDS |
| AACTGGCATCAGATTCGCCA+AGG | 0.621298 | tig0029230:+18525 | Msa1441120:intergenic |
| AATAGTAGCTGTAACTGTGA+AGG | 0.625344 | tig0029230:-17665 | Msa1441120:intron |
| GTGGTTGCACTTGTTAGCGG+CGG | 0.625443 | tig0029230:-18604 | Msa1441120:CDS |
| AGTATATCAGCTGATGTGCA+AGG | 0.626133 | tig0029230:-13267 | Msa1441120:three_prime_UTR |
| GTGAAGTATACCCTCATGCA+AGG | 0.630355 | tig0029230:+15157 | Msa1441120:intergenic |
| AAGATAGCTGAATTACAGGA+AGG | 0.634710 | tig0029230:-14909 | Msa1441120:CDS |
| GTATTGAATACACTTCATCA+TGG | 0.635668 | tig0029230:+18564 | Msa1441120:intergenic |
| GAACACACAGCAGTAACAGA+GGG | 0.635977 | tig0029230:+18295 | Msa1441120:intergenic |
| GCATGAGGGTATACTTCACA+TGG | 0.636722 | tig0029230:-15153 | Msa1441120:CDS |
| TCCGATTCCATAGCTCCTGT+AGG | 0.637048 | tig0029230:-16662 | Msa1441120:CDS |
| CTTTGCAGGATCCAAACCCA+TGG | 0.641084 | tig0029230:+17243 | Msa1441120:intergenic |
| AGTAAGCCTTCAAATGTCAG+TGG | 0.645405 | tig0029230:-13462 | Msa1441120:CDS |
| CCTACCATGAATCTTTGCAG+TGG | 0.651514 | tig0029230:-15107 | Msa1441120:CDS |
| CTATACAATGATCTTCGCCA+AGG | 0.653353 | tig0029230:-13100 | Msa1441120:three_prime_UTR |
| TTGCAGGCAACCTTGCATGA+GGG | 0.657732 | tig0029230:-15167 | Msa1441120:intron |
| CCACTGCAAAGATTCATGGT+AGG | 0.663579 | tig0029230:+15107 | Msa1441120:intergenic |
| TGGTTGCAAGATTCATGCAA+TGG | 0.665299 | tig0029230:-16398 | Msa1441120:intron |
| ATATGTGAAGTTTATAACAC+AGG | 0.670169 | tig0029230:-16144 | Msa1441120:CDS |
| TTCACATGGCTGGTCAACTG+GGG | 0.673143 | tig0029230:-15139 | Msa1441120:CDS |
| TTCCTGTTACAGGTGCTGGG+CGG | 0.686964 | tig0029230:-13346 | Msa1441120:CDS |
| AACTTCCCCAAAGATGAAGG+TGG | 0.687319 | tig0029230:-18623 | Msa1441120:exon |
| TCTGTGTTTGAAGTGCATGA+CGG | 0.689571 | tig0029230:-16539 | Msa1441120:CDS |
| TGAAGTTTATAACACAGGAG+AGG | 0.694284 | tig0029230:-16139 | Msa1441120:CDS |
| TCTTTGCAGTGGAGGCCCTG+GGG | 0.696989 | tig0029230:-15096 | Msa1441120:CDS |
| CAAGGTCTGATAAAATTCCG+GGG | 0.703678 | tig0029230:-13082 | Msa1441120:three_prime_UTR |
| TAGGAACTTACAATAAAGAG+CGG | 0.707100 | tig0029230:+16981 | Msa1441120:intergenic |
| TGACATGAATAAGTTCTCTG+AGG | 0.714323 | tig0029230:-16177 | Msa1441120:CDS |
| ATGCAAGTAAGCATTTAACG+AGG | 0.725793 | tig0029230:+17201 | Msa1441110:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATTAAAAAATA+TGG | + | tig0029230:18427-18446 | Msa1441120:intergenic | 0.0% |
| !! | TAAAAAATACAAAAGAAAAA+TGG | - | tig0029230:17194-17213 | Msa1441120:CDS | 10.0% |
| !! | ATTAATTCATAAAACTAAAA+GGG | + | tig0029230:18582-18601 | Msa1441120:intergenic | 10.0% |
| !! | AAAATGTAATTTATATAGAT+AGG | - | tig0029230:18648-18667 | Msa1441120:five_prime_UTR | 10.0% |
| !!! | TCTTTTTTCAATTTGTATAT+GGG | - | tig0029230:14033-14052 | Msa1441120:CDS | 15.0% |
| !!! | AAGATTTAATGATTATTTTG+AGG | - | tig0029230:15364-15383 | Msa1441120:intron | 15.0% |
| !! | ATCCTTAAATTAAATATGTT+AGG | - | tig0029230:16244-16263 | Msa1441120:CDS | 15.0% |
| !! | TCCTTAAATTAAATATGTTA+GGG | - | tig0029230:16245-16264 | Msa1441120:CDS | 15.0% |
| !! | ACAATATTATCCTTTATTAA+TGG | - | tig0029230:16983-17002 | Msa1441120:intron | 15.0% |
| !! | ATTTATCAAAATATACATAC+CGG | - | tig0029230:17728-17747 | Msa1441120:intron | 15.0% |
| !! | GTAATAATCTTAAGATAAAA+AGG | - | tig0029230:18028-18047 | Msa1441120:intron | 15.0% |
| !! | GATTAATTCATAAAACTAAA+AGG | + | tig0029230:18583-18602 | Msa1441120:intergenic | 15.0% |
| !!! | AAATAATTCTAACTCTGTTT+TGG | - | tig0029230:13926-13945 | Msa1441120:intron | 20.0% |
| !!! | CTCTTTTTTCAATTTGTATA+TGG | - | tig0029230:14032-14051 | Msa1441120:CDS | 20.0% |
| !! | AAAAATAAGATCTCTCTAAA+TGG | + | tig0029230:14103-14122 | Msa1441120:intergenic | 20.0% |
| !! | AGCTATATACTCTTAAAAAT+AGG | - | tig0029230:14194-14213 | Msa1441120:CDS | 20.0% |
| !! | GCTATATACTCTTAAAAATA+GGG | - | tig0029230:14195-14214 | Msa1441120:CDS | 20.0% |
| !!! | TTTTTGTAATTTTGTGTACT+TGG | - | tig0029230:14319-14338 | Msa1441120:intron | 20.0% |
| !!! | TACTTGGATAATTGTTATTT+TGG | - | tig0029230:14335-14354 | Msa1441120:intron | 20.0% |
| !! | AATTCTTTATCTATTTCACA+AGG | - | tig0029230:14363-14382 | Msa1441120:intron | 20.0% |
| !! | TGCAAATAATAAAGGTAAAA+AGG | - | tig0029230:15605-15624 | Msa1441120:intron | 20.0% |
| !! | TATTATTGTGAAAATTGACT+TGG | - | tig0029230:15761-15780 | Msa1441120:intron | 20.0% |
| !!! | ATTATTGTGAAAATTGACTT+GGG | - | tig0029230:15762-15781 | Msa1441120:intron | 20.0% |
| !! | ATTAAAGAAACACAAAGTAA+AGG | + | tig0029230:15845-15864 | Msa1441120:intergenic | 20.0% |
| !!! | TTAATTTGATTAGCTTCATA+TGG | - | tig0029230:15860-15879 | Msa1441120:intron | 20.0% |
| !!! | TAATTTGATTAGCTTCATAT+GGG | - | tig0029230:15861-15880 | Msa1441120:intron | 20.0% |
| !!! | TTGACAAGATTTTAAATCAT+TGG | - | tig0029230:15991-16010 | Msa1441120:CDS | 20.0% |
| !!! | CATATTTAATTTAAGGATGA+AGG | + | tig0029230:16242-16261 | Msa1441120:intergenic | 20.0% |
| !!! | TTCTAAAAATATCACTTTAC+TGG | - | tig0029230:16656-16675 | Msa1441120:CDS | 20.0% |
| !! | TATTGTAAAGTAACTCATAA+AGG | + | tig0029230:16969-16988 | Msa1441120:intergenic | 20.0% |
| !! | ATTATCCTTTATTAATGGTA+TGG | - | tig0029230:16988-17007 | Msa1441120:intron | 20.0% |
| !! | TTATCCTTTATTAATGGTAT+GGG | - | tig0029230:16989-17008 | Msa1441120:intron | 20.0% |
| !! | TCCAAAGTAACTTATAATTT+AGG | - | tig0029230:17132-17151 | Msa1441120:intron | 20.0% |
| !! | TCCTAAATTATAAGTTACTT+TGG | + | tig0029230:17136-17155 | Msa1441120:intergenic | 20.0% |
| !! | AAGTAACTTATAATTTAGGA+CGG | - | tig0029230:17136-17155 | Msa1441120:intron | 20.0% |
| !!! | CAAATATATGTTCTAAACAA+TGG | + | tig0029230:17769-17788 | Msa1441120:intergenic | 20.0% |
| !!! | TCATTTTGAAAACATGAAAT+GGG | + | tig0029230:17811-17830 | Msa1441120:intergenic | 20.0% |
| !!! | ATCATTTTGAAAACATGAAA+TGG | + | tig0029230:17812-17831 | Msa1441120:intergenic | 20.0% |
| !! | AGAATAATAAATTTGATCAC+TGG | + | tig0029230:18054-18073 | Msa1441120:intergenic | 20.0% |
| !! | TTAATGCAACAAATTTGAAA+AGG | + | tig0029230:18404-18423 | Msa1441120:intergenic | 20.0% |
| !! | AAATATCAAATAGGATCAAA+TGG | - | tig0029230:18443-18462 | Msa1441120:CDS | 20.0% |
| !!! | ACTTGGCTTTTAAAAAAAAT+TGG | - | tig0029230:18502-18521 | Msa1441120:CDS | 20.0% |
| !!! | CTTGGCTTTTAAAAAAAATT+GGG | - | tig0029230:18503-18522 | Msa1441120:CDS | 20.0% |
| !!! | ATCTCACTTTTGTTGTTTTT+AGG | + | tig0029230:12934-12953 | Msa1125800:intergenic | 25.0% |
| ! | ATGATGAAGTGTATTCAATA+CGG | - | tig0029230:13073-13092 | Msa1441120:three_prime_UTR | 25.0% |
| ! | ATCAAATATGCTGAATGTAT+GGG | - | tig0029230:13193-13212 | Msa1441120:three_prime_UTR | 25.0% |
| !! | GTTTCTCTCATAATTTTTCT+AGG | + | tig0029230:13780-13799 | Msa1441120:intergenic | 25.0% |
| !!! | TTTTTCAATTTGTATATGGG+AGG | - | tig0029230:14036-14055 | Msa1441120:CDS | 25.0% |
| ! | ATTTAGAAGAGTCATATGAT+AGG | + | tig0029230:14074-14093 | Msa1441120:intergenic | 25.0% |
| ! | TAAATGTTGTCCATTGATAT+CGG | + | tig0029230:14151-14170 | Msa1441120:intergenic | 25.0% |
| ! | TATCAATGGACAACATTTAA+AGG | - | tig0029230:14152-14171 | Msa1441120:CDS | 25.0% |
| ! | AATTCCAATGAAAAAGGAAA+TGG | + | tig0029230:14292-14311 | Msa1441120:intergenic | 25.0% |
| ! | AAGTTGAATTCCAATGAAAA+AGG | + | tig0029230:14298-14317 | Msa1441120:intergenic | 25.0% |
| ! | TTATATATACACACAGAGAA+AGG | + | tig0029230:14494-14513 | Msa1441120:intergenic | 25.0% |
| ! | TCATATGGAATAAATGTTTG+CGG | - | tig0029230:14594-14613 | Msa1441120:intron | 25.0% |
| !! | TTTTCCATTTTCCATAAAAC+TGG | - | tig0029230:14739-14758 | Msa1441120:intron | 25.0% |
| !! | TTTCCATTTTCCATAAAACT+GGG | - | tig0029230:14740-14759 | Msa1441120:intron | 25.0% |
| !!! | ATTGAATTTTCAAGATCAGT+AGG | + | tig0029230:14807-14826 | Msa1441120:intergenic | 25.0% |
| ! | AAATATCGATCATAAGTTTG+AGG | + | tig0029230:14854-14873 | Msa1441120:intergenic | 25.0% |
| !! | TTTTCTAAATGAAATGCCAA+GGG | + | tig0029230:15009-15028 | Msa1441120:intergenic | 25.0% |
| ! | TGTCAAAGAACAAAATAATG+TGG | + | tig0029230:15310-15329 | Msa1441120:intergenic | 25.0% |
| ! | ATATGTGAAGTTTATAACAC+AGG | - | tig0029230:15491-15510 | Msa1441120:intron | 25.0% |
| !!! | GTTTTGGTTGCAAATAATAA+AGG | - | tig0029230:15597-15616 | Msa1441120:intron | 25.0% |
| ! | GAAATCAATGCAAAATATTC+TGG | - | tig0029230:15921-15940 | Msa1441120:intron | 25.0% |
| !! | TTTTTCGTACATAACTATCA+AGG | - | tig0029230:16073-16092 | Msa1441120:CDS | 25.0% |
| !! | CAGTGTGTTTAAACTAATTT+TGG | - | tig0029230:16176-16195 | Msa1441120:CDS | 25.0% |
| !!! | AGGAATTGAAGTATCATTTT+GGG | + | tig0029230:16208-16227 | Msa1441120:intergenic | 25.0% |
| !!! | AAGGAATTGAAGTATCATTT+TGG | + | tig0029230:16209-16228 | Msa1441120:intergenic | 25.0% |
| !! | GCCCTAACATATTTAATTTA+AGG | + | tig0029230:16249-16268 | Msa1441120:intergenic | 25.0% |
| ! | ATCTCTAAACCTATACAAAT+GGG | + | tig0029230:16884-16903 | Msa1441120:intergenic | 25.0% |
| ! | AATCTCTAAACCTATACAAA+TGG | + | tig0029230:16885-16904 | Msa1441120:intergenic | 25.0% |
| ! | AGAGAGTAATAAATAGTGAA+GGG | - | tig0029230:17040-17059 | Msa1441120:CDS | 25.0% |
| !! | TAAATAGTGAAGGGTATAAA+AGG | - | tig0029230:17049-17068 | Msa1441120:intron | 25.0% |
| ! | TGTAAAACACCCTATAATTT+GGG | - | tig0029230:17098-17117 | Msa1441120:intron | 25.0% |
| ! | AAACTTTGTCCCAAATTATA+GGG | + | tig0029230:17110-17129 | Msa1441120:intergenic | 25.0% |
| ! | AAAACTTTGTCCCAAATTAT+AGG | + | tig0029230:17111-17130 | Msa1441120:intergenic | 25.0% |
| ! | CAAACATATGTTATGTAATC+TGG | - | tig0029230:17251-17270 | Msa1441120:CDS | 25.0% |
| ! | TCCTCAAAATATTTATGTCA+TGG | - | tig0029230:17293-17312 | Msa1441120:intron | 25.0% |
| !! | ACCATGACATAAATATTTTG+AGG | + | tig0029230:17297-17316 | Msa1441120:intergenic | 25.0% |
| ! | TTCAAAGACATCATGTTATT+GGG | - | tig0029230:17443-17462 | Msa1441120:intron | 25.0% |
| ! | ACTTGTGATTGACAATATAA+TGG | + | tig0029230:17535-17554 | Msa1441120:intergenic | 25.0% |
| ! | TCATTATTGACATTATCAGT+AGG | + | tig0029230:17591-17610 | Msa1441120:intergenic | 25.0% |
| !! | ACTGATAATGTCAATAATGA+TGG | - | tig0029230:17591-17610 | Msa1441120:intron | 25.0% |
| ! | ATGGAGGAATAAAATTAATC+CGG | + | tig0029230:17750-17769 | Msa1441120:intergenic | 25.0% |
| !! | ATATATGTTCTAAACAATGG+AGG | + | tig0029230:17766-17785 | Msa1441120:intergenic | 25.0% |
| !!! | ACATATATTTGTTGTGCATT+CGG | - | tig0029230:17778-17797 | Msa1441120:intron | 25.0% |
| !! | GGATACAAATAATTTGTGTA+TGG | - | tig0029230:17900-17919 | Msa1441120:intron | 25.0% |
| ! | AAAAAGATAAGCAACAGTTT+GGG | + | tig0029230:18685-18704 | Msa1441120:intergenic | 25.0% |
| AAACAACAAAAGTGAGATAC+CGG | - | tig0029230:12936-12955 | Msa1441120:three_prime_UTR | 30.0% | |
| GTATTGAATACACTTCATCA+TGG | + | tig0029230:13074-13093 | Msa1441120:intergenic | 30.0% | |
| CATCAAATATGCTGAATGTA+TGG | - | tig0029230:13192-13211 | Msa1441120:three_prime_UTR | 30.0% | |
| ATCTTGAGCTTGGTTATAAA+AGG | - | tig0029230:13257-13276 | Msa1441120:three_prime_UTR | 30.0% | |
| AACCAATTACCATTTCATTG+AGG | + | tig0029230:13471-13490 | Msa1441120:intergenic | 30.0% | |
| ACAACATTAGAGAGAAAGAT+TGG | - | tig0029230:13617-13636 | Msa1441120:intron | 30.0% | |
| CAACATTAGAGAGAAAGATT+GGG | - | tig0029230:13618-13637 | Msa1441120:intron | 30.0% | |
| ! | TTCCACATCTTTTCTACTAT+AGG | + | tig0029230:13649-13668 | Msa1441120:intergenic | 30.0% |
| ! | AAACTAGGTTTAGTTGGTTT+GGG | - | tig0029230:13667-13686 | Msa1441120:intron | 30.0% |
| ! | ATAGGGTTGCTTTGAATATA+TGG | - | tig0029230:14212-14231 | Msa1441120:CDS | 30.0% |
| !! | GAAACCATTTCCTTTTTCAT+TGG | - | tig0029230:14285-14304 | Msa1441120:intron | 30.0% |
| TGTAGATTGACATTGTTCTA+TGG | - | tig0029230:14527-14546 | Msa1441120:intron | 30.0% | |
| TAGGAACTTACAATAAAGAG+CGG | + | tig0029230:14657-14676 | Msa1441120:intergenic | 30.0% | |
| TTATGGAAAATGGAAAACTG+AGG | + | tig0029230:14736-14755 | Msa1441120:intergenic | 30.0% | |
| CGAATAGATACAGAAGAAAA+CGG | + | tig0029230:14882-14901 | Msa1441120:intergenic | 30.0% | |
| ! | GTTTTCTAAATGAAATGCCA+AGG | + | tig0029230:15010-15029 | Msa1441120:intergenic | 30.0% |
| GGCATTTCATTTAGAAAACA+AGG | - | tig0029230:15011-15030 | Msa1441120:CDS | 30.0% | |
| !! | TGTCTTGTGTTTTTAAAGAG+TGG | + | tig0029230:15044-15063 | Msa1441120:intergenic | 30.0% |
| TGAGATTTCTATGCAGAATT+TGG | - | tig0029230:15071-15090 | Msa1441120:CDS | 30.0% | |
| GAGATTTCTATGCAGAATTT+GGG | - | tig0029230:15072-15091 | Msa1441120:CDS | 30.0% | |
| ATTGGATAAGTGTAATCAAG+AGG | + | tig0029230:15150-15169 | Msa1441120:intergenic | 30.0% | |
| TTATGTTCTACGACATCAAT+TGG | + | tig0029230:15168-15187 | Msa1441120:intergenic | 30.0% | |
| TTTCTTTATAGCAGATTTGC+AGG | - | tig0029230:15341-15360 | Msa1441120:intron | 30.0% | |
| TATTCATGTCATCGATGTAA+AGG | + | tig0029230:15449-15468 | Msa1441120:intergenic | 30.0% | |
| ! | TAGAGCATATGTTGAAGTTT+TGG | - | tig0029230:15581-15600 | Msa1441120:intron | 30.0% |
| CACAATAATATCAATGAAGC+AGG | + | tig0029230:15751-15770 | Msa1441120:intergenic | 30.0% | |
| TATGGGAACAGTTTATTCTT+TGG | - | tig0029230:15878-15897 | Msa1441120:intron | 30.0% | |
| ! | AACAGTTTATTCTTTGGAAG+TGG | - | tig0029230:15884-15903 | Msa1441120:intron | 30.0% |
| ! | ACAGTTTATTCTTTGGAAGT+GGG | - | tig0029230:15885-15904 | Msa1441120:intron | 30.0% |
| !! | GGAATTGAAGTATCATTTTG+GGG | + | tig0029230:16207-16226 | Msa1441120:intergenic | 30.0% |
| AGTGAAGTTCACTAAGTTTA+GGG | - | tig0029230:16337-16356 | Msa1441120:intron | 30.0% | |
| ATCCAATTTCAAATGCTATC+TGG | - | tig0029230:16413-16432 | Msa1441120:CDS | 30.0% | |
| ! | TACCAGATAGCATTTGAAAT+TGG | + | tig0029230:16418-16437 | Msa1441120:intergenic | 30.0% |
| AATGAAGATAGCTGAATTAC+AGG | - | tig0029230:16722-16741 | Msa1441120:intron | 30.0% | |
| ACAAGGACATAAAGGAATAT+GGG | + | tig0029230:16774-16793 | Msa1441120:intergenic | 30.0% | |
| AACAAGGACATAAAGGAATA+TGG | + | tig0029230:16775-16794 | Msa1441120:intergenic | 30.0% | |
| !! | AAGAAACTAGAGTACCTTTT+TGG | + | tig0029230:16807-16826 | Msa1441120:intergenic | 30.0% |
| TCACACTCTTAAAATAGCAA+AGG | + | tig0029230:16945-16964 | Msa1441120:intergenic | 30.0% | |
| CTTTCCCATACCATTAATAA+AGG | + | tig0029230:16996-17015 | Msa1441120:intergenic | 30.0% | |
| GAGAGAGTAATAAATAGTGA+AGG | - | tig0029230:17039-17058 | Msa1441120:CDS | 30.0% | |
| CTGTAAAACACCCTATAATT+TGG | - | tig0029230:17097-17116 | Msa1441120:intron | 30.0% | |
| ! | TAACTTATAATTTAGGACGG+AGG | - | tig0029230:17139-17158 | Msa1441120:intron | 30.0% |
| ! | AACTTATAATTTAGGACGGA+GGG | - | tig0029230:17140-17159 | Msa1441120:intron | 30.0% |
| TCAAATCACATAAACCAAAG+AGG | + | tig0029230:17223-17242 | Msa1441120:intergenic | 30.0% | |
| ! | ATGGTTGCTAACAATTGTTT+TGG | - | tig0029230:17312-17331 | Msa1441120:intron | 30.0% |
| ! | TGGTTGCTAACAATTGTTTT+GGG | - | tig0029230:17313-17332 | Msa1441120:intron | 30.0% |
| GTTCAAAGACATCATGTTAT+TGG | - | tig0029230:17442-17461 | Msa1441120:intron | 30.0% | |
| TCAAAGACATCATGTTATTG+GGG | - | tig0029230:17444-17463 | Msa1441120:intron | 30.0% | |
| ! | ACTTTCTTCCTCAATCATTT+TGG | - | tig0029230:17862-17881 | Msa1441120:intron | 30.0% |
| ! | CTTTCTTCCTCAATCATTTT+GGG | - | tig0029230:17863-17882 | Msa1441120:intron | 30.0% |
| ! | TTTCTTCCTCAATCATTTTG+GGG | - | tig0029230:17864-17883 | Msa1441120:intron | 30.0% |
| TAAATTGTCCGAGAAAGATT+AGG | + | tig0029230:18102-18121 | Msa1441120:intergenic | 30.0% | |
| AACTTTCTCAAATAAGTCAG+AGG | - | tig0029230:18232-18251 | Msa1441120:CDS | 30.0% | |
| ACTTTCTCAAATAAGTCAGA+GGG | - | tig0029230:18233-18252 | Msa1441120:CDS | 30.0% | |
| CAAATAGGATCAAATGGAAT+AGG | - | tig0029230:18449-18468 | Msa1441120:CDS | 30.0% | |
| !!! | TAGGTTTTATTCAGCCATTT+AGG | - | tig0029230:18468-18487 | Msa1441120:CDS | 30.0% |
| ATCTGCAATATTCAGATGTA+TGG | - | tig0029230:18606-18625 | Msa1441120:CDS | 30.0% | |
| CAAAAAGATAAGCAACAGTT+TGG | + | tig0029230:18686-18705 | Msa1441120:intergenic | 30.0% | |
| !! | CAAACTGTTGCTTATCTTTT+TGG | - | tig0029230:18684-18703 | Msa1441120:five_prime_UTR | 30.0% |
| AGCTACATGTATCAAACTGT+TGG | - | tig0029230:13157-13176 | Msa1441120:three_prime_UTR | 35.0% | |
| GCTACATGTATCAAACTGTT+GGG | - | tig0029230:13158-13177 | Msa1441120:three_prime_UTR | 35.0% | |
| CTTGGTTATAAAAGGACTCA+AGG | - | tig0029230:13265-13284 | Msa1441120:three_prime_UTR | 35.0% | |
| ! | TTTTGTTACGCCAAGTCAAA+AGG | - | tig0029230:13311-13330 | Msa1441120:CDS | 35.0% |
| ! | TTGTTTCTTTGGCGTACTTA+TGG | - | tig0029230:13425-13444 | Msa1441120:CDS | 35.0% |
| CTCCTCAATGAAATGGTAAT+TGG | - | tig0029230:13466-13485 | Msa1441120:CDS | 35.0% | |
| TTCACGAATTAAGCTTGATG+AGG | - | tig0029230:13545-13564 | Msa1441120:intron | 35.0% | |
| CACCTATAGTAGAAAAGATG+TGG | - | tig0029230:13644-13663 | Msa1441120:intron | 35.0% | |
| GTAGAAAAGATGTGGAAACT+AGG | - | tig0029230:13652-13671 | Msa1441120:intron | 35.0% | |
| ATGTGGAAACTAGGTTTAGT+TGG | - | tig0029230:13661-13680 | Msa1441120:intron | 35.0% | |
| GAAACTAGGTTTAGTTGGTT+TGG | - | tig0029230:13666-13685 | Msa1441120:intron | 35.0% | |
| ! | AAGTCTTATACCACTGATTG+GGG | + | tig0029230:13877-13896 | Msa1441120:intergenic | 35.0% |
| ! | CAAGTCTTATACCACTGATT+GGG | + | tig0029230:13878-13897 | Msa1441120:intergenic | 35.0% |
| CTACTATTCCATTTGCAATC+TGG | + | tig0029230:13958-13977 | Msa1441120:intergenic | 35.0% | |
| AATAGTAGCTGTAACTGTGA+AGG | - | tig0029230:13970-13989 | Msa1441120:CDS | 35.0% | |
| GAGTCATATGATAGGAACAT+AGG | + | tig0029230:14066-14085 | Msa1441120:intergenic | 35.0% | |
| ATAGCTGCATTAGCATATCA+TGG | + | tig0029230:14180-14199 | Msa1441120:intergenic | 35.0% | |
| ATGCAAGTAAGCATTTAACG+AGG | + | tig0029230:14437-14456 | Msa1441120:intergenic | 35.0% | |
| ATATACACACAGAGAAAGGA+AGG | + | tig0029230:14490-14509 | Msa1441120:intergenic | 35.0% | |
| ! | TCTGTGTAACTCTTTTTGAC+AGG | - | tig0029230:14571-14590 | Msa1441120:intron | 35.0% |
| ! | ACTCTTTTTGACAGGTCATA+TGG | - | tig0029230:14579-14598 | Msa1441120:intron | 35.0% |
| AGGAACTTACAATAAAGAGC+GGG | + | tig0029230:14656-14675 | Msa1441120:intergenic | 35.0% | |
| ! | GTAAATTGAGCCCAGTTTTA+TGG | + | tig0029230:14753-14772 | Msa1441120:intergenic | 35.0% |
| TGACATGAATAAGTTCTCTG+AGG | - | tig0029230:15458-15477 | Msa1441120:intron | 35.0% | |
| TGAAGTTTATAACACAGGAG+AGG | - | tig0029230:15496-15515 | Msa1441120:intron | 35.0% | |
| ATTTCAACTGTACTTCGAGA+TGG | + | tig0029230:15537-15556 | Msa1441120:intergenic | 35.0% | |
| CTAAAATCCATCTCAAGTAG+AGG | + | tig0029230:15561-15580 | Msa1441120:intergenic | 35.0% | |
| !! | ATGTGCAGAGTATTTCTAGT+TGG | - | tig0029230:15634-15653 | Msa1441120:intron | 35.0% |
| !! | TGTGCAGAGTATTTCTAGTT+GGG | - | tig0029230:15635-15654 | Msa1441120:intron | 35.0% |
| !! | CTGTCGATTCAAGTTGATTT+AGG | - | tig0029230:15814-15833 | Msa1441120:intron | 35.0% |
| AATGCAAAATATTCTGGCAC+TGG | - | tig0029230:15927-15946 | Msa1441120:intron | 35.0% | |
| GAAACTGACATGATACTGTT+TGG | + | tig0029230:15954-15973 | Msa1441120:intergenic | 35.0% | |
| GGATGAAGGAATGAAATACA+AGG | + | tig0029230:16228-16247 | Msa1441120:intergenic | 35.0% | |
| !! | TATGTTAGGGCATTGTAACT+AGG | - | tig0029230:16258-16277 | Msa1441120:CDS | 35.0% |
| ! | AGTTGGGGTGTTCTTATTAA+AGG | - | tig0029230:16281-16300 | Msa1441120:CDS | 35.0% |
| CAGTGAAGTTCACTAAGTTT+AGG | - | tig0029230:16336-16355 | Msa1441120:intron | 35.0% | |
| ACTAAAAAACAGTGAAGCAG+TGG | - | tig0029230:16578-16597 | Msa1441120:CDS | 35.0% | |
| AAGATAGCTGAATTACAGGA+AGG | - | tig0029230:16726-16745 | Msa1441120:intron | 35.0% | |
| !! | TTTTTGGTAGATCAGGAACA+AGG | + | tig0029230:16791-16810 | Msa1441120:intergenic | 35.0% |
| TTGTTCCTGATCTACCAAAA+AGG | - | tig0029230:16790-16809 | Msa1441120:intron | 35.0% | |
| CTTGACGAATTGCATATCAA+TGG | + | tig0029230:16857-16876 | Msa1441120:intergenic | 35.0% | |
| TGATATGCAATTCGTCAAGA+AGG | - | tig0029230:16858-16877 | Msa1441120:intron | 35.0% | |
| AAGAAAAATGGACACCTCTT+TGG | - | tig0029230:17206-17225 | Msa1441120:CDS | 35.0% | |
| TTGGGTGAATATATGTGTGA+TGG | - | tig0029230:17331-17350 | Msa1441120:intron | 35.0% | |
| TGTAGAAATTGAGACCATCA+TGG | - | tig0029230:17410-17429 | Msa1441120:intron | 35.0% | |
| TGAACAAGATCTTTCCATGA+TGG | + | tig0029230:17427-17446 | Msa1441120:intergenic | 35.0% | |
| TTTCAGAAATGTGTGATTCC+CGG | - | tig0029230:17498-17517 | Msa1441120:intron | 35.0% | |
| TATAATGGCACATAGCTTTC+CGG | + | tig0029230:17520-17539 | Msa1441120:intergenic | 35.0% | |
| ATTGTCAATCACAAGTGTTC+TGG | - | tig0029230:17539-17558 | Msa1441120:intron | 35.0% | |
| TTATCAGTAGGCAAAGAATC+AGG | + | tig0029230:17579-17598 | Msa1441120:intergenic | 35.0% | |
| TTCTCTACCTAAATCACGAA+TGG | - | tig0029230:17620-17639 | Msa1441120:intron | 35.0% | |
| TAATAGATAACGACTTTGCC+TGG | - | tig0029230:17685-17704 | Msa1441120:intron | 35.0% | |
| AATAGATAACGACTTTGCCT+GGG | - | tig0029230:17686-17705 | Msa1441120:intron | 35.0% | |
| ACTAACCATTATATCTTCCC+AGG | + | tig0029230:17706-17725 | Msa1441120:intergenic | 35.0% | |
| TTTGAAGGCAAAAGAACATG+AGG | + | tig0029230:17928-17947 | Msa1441120:intergenic | 35.0% | |
| ! | CATGTTCTTTTGCCTTCAAA+AGG | - | tig0029230:17928-17947 | Msa1441120:intron | 35.0% |
| !!! | AAAAGGCATCCATGCATTTT+TGG | - | tig0029230:17945-17964 | Msa1441120:intron | 35.0% |
| !!! | AAAGGCATCCATGCATTTTT+GGG | - | tig0029230:17946-17965 | Msa1441120:intron | 35.0% |
| AGGAAGATGGAGTACAATAT+AGG | - | tig0029230:17978-17997 | Msa1441120:intron | 35.0% | |
| AGGACCATACAAAACAAACA+GGG | + | tig0029230:18082-18101 | Msa1441120:intergenic | 35.0% | |
| TAGGACCATACAAAACAAAC+AGG | + | tig0029230:18083-18102 | Msa1441120:intergenic | 35.0% | |
| TGTATGGTCCTAATCTTTCT+CGG | - | tig0029230:18091-18110 | Msa1441120:intron | 35.0% | |
| ! | AAAAGTGCATTGCAGAACAT+AGG | + | tig0029230:18210-18229 | Msa1441120:intergenic | 35.0% |
| ACAGGAACTATGTTGAAGAT+TGG | + | tig0029230:18276-18295 | Msa1441120:intergenic | 35.0% | |
| TTCAACATAGTTCCTGTTAC+AGG | - | tig0029230:18279-18298 | Msa1441120:CDS | 35.0% | |
| AGTCAGCAAAAGAACCTAAA+TGG | + | tig0029230:18485-18504 | Msa1441120:intergenic | 35.0% | |
| !! | TTTAGGTTCTTTTGCTGACT+TGG | - | tig0029230:18485-18504 | Msa1441120:CDS | 35.0% |
| AACAATTACGATGCAACGAC+CGG | + | tig0029230:12975-12994 | Msa1441120:intergenic | 40.0% | |
| TGAATTCTCCTCCTGAACAA+TGG | + | tig0029230:13223-13242 | Msa1441120:intergenic | 40.0% | |
| TTGTTCAGGAGGAGAATTCA+AGG | - | tig0029230:13223-13242 | Msa1441120:three_prime_UTR | 40.0% | |
| ! | TCATCAAAGCATCTTGAGCT+TGG | - | tig0029230:13247-13266 | Msa1441120:three_prime_UTR | 40.0% |
| !! | GAAAGTGTTTGTTCGAGGTT+AGG | - | tig0029230:13400-13419 | Msa1441120:CDS | 40.0% |
| !! | GAGGTTAGGTCTTGTTTCTT+TGG | - | tig0029230:13414-13433 | Msa1441120:CDS | 40.0% |
| ATCCTTGCTCCTCAATGAAA+TGG | - | tig0029230:13459-13478 | Msa1441120:CDS | 40.0% | |
| TACCATTTCATTGAGGAGCA+AGG | + | tig0029230:13464-13483 | Msa1441120:intergenic | 40.0% | |
| ! | GACCTGTACATTTTGTAGCA+AGG | - | tig0029230:13703-13722 | Msa1441120:intron | 40.0% |
| CTCCTTGCTACAAAATGTAC+AGG | + | tig0029230:13708-13727 | Msa1441120:intergenic | 40.0% | |
| ! | CCAAGTCTTATACCACTGAT+TGG | + | tig0029230:13879-13898 | Msa1441120:intergenic | 40.0% |
| CCAATCAGTGGTATAAGACT+TGG | - | tig0029230:13876-13895 | Msa1441120:intron | 40.0% | |
| ! | TTGTCCATTGATATCGGTTG+AGG | + | tig0029230:14145-14164 | Msa1441120:intergenic | 40.0% |
| GGAATAAATGTTTGCGGAGA+AGG | - | tig0029230:14600-14619 | Msa1441120:intron | 40.0% | |
| ATAAATGTTTGCGGAGAAGG+AGG | - | tig0029230:14603-14622 | Msa1441120:intron | 40.0% | |
| TAAATGTTTGCGGAGAAGGA+GGG | - | tig0029230:14604-14623 | Msa1441120:intron | 40.0% | |
| TTGTAAGTTCCTACCACCAT+TGG | - | tig0029230:14664-14683 | Msa1441120:intron | 40.0% | |
| TTCTCAGTTAACCACACCAA+TGG | + | tig0029230:14683-14702 | Msa1441120:intergenic | 40.0% | |
| !! | GAGCCCAGTTTTATGGAAAA+TGG | + | tig0029230:14746-14765 | Msa1441120:intergenic | 40.0% |
| GATCAGTAGGAACACATAAC+AGG | + | tig0029230:14794-14813 | Msa1441120:intergenic | 40.0% | |
| AATGAAATGCCAAGGGATGA+AGG | + | tig0029230:15002-15021 | Msa1441120:intergenic | 40.0% | |
| ! | TCTGTGTTTGAAGTGCATGA+CGG | - | tig0029230:15096-15115 | Msa1441120:CDS | 40.0% |
| GTAATCAAGAGGCTTGCATA+AGG | + | tig0029230:15139-15158 | Msa1441120:intergenic | 40.0% | |
| TGGTTGCAAGATTCATGCAA+TGG | - | tig0029230:15237-15256 | Msa1441120:intron | 40.0% | |
| !! | CAACTAGCAGCGTTTGATTT+TGG | - | tig0029230:15399-15418 | Msa1441120:intron | 40.0% |
| TGAAATGCCTCTACTTGAGA+TGG | - | tig0029230:15551-15570 | Msa1441120:intron | 40.0% | |
| !! | AAATTGACTTGGGACATCGT+TGG | - | tig0029230:15772-15791 | Msa1441120:intron | 40.0% |
| ! | TGGGGTGTTCTTATTAAAGG+AGG | - | tig0029230:16284-16303 | Msa1441120:CDS | 40.0% |
| !! | TCTAATGCTTCTTGACTTGC+AGG | - | tig0029230:16452-16471 | Msa1441120:CDS | 40.0% |
| TGCAAAGATTCATGGTAGGA+GGG | + | tig0029230:16527-16546 | Msa1441120:intergenic | 40.0% | |
| TCAATATCGACATCTGCAGT+TGG | - | tig0029230:16618-16637 | Msa1441120:CDS | 40.0% | |
| CAGCTATCTTCATTTGTCTG+AGG | + | tig0029230:16716-16735 | Msa1441120:intergenic | 40.0% | |
| GATCAGGAACAAGGACATAA+AGG | + | tig0029230:16782-16801 | Msa1441120:intergenic | 40.0% | |
| !! | GAGTACCTTTTTGGTAGATC+AGG | + | tig0029230:16798-16817 | Msa1441120:intergenic | 40.0% |
| TCAAGAAGGCCCATTTGTAT+AGG | - | tig0029230:16872-16891 | Msa1441120:intron | 40.0% | |
| CTTCACTTCAACATATGCTC+TGG | + | tig0029230:17361-17380 | Msa1441120:intergenic | 40.0% | |
| CCATCCTCGACATAAAGAAT+GGG | + | tig0029230:17384-17403 | Msa1441120:intergenic | 40.0% | |
| ACCATCCTCGACATAAAGAA+TGG | + | tig0029230:17385-17404 | Msa1441120:intergenic | 40.0% | |
| ATAATGGCACATAGCTTTCC+GGG | + | tig0029230:17519-17538 | Msa1441120:intergenic | 40.0% | |
| AACTGCTCCATTCGTGATTT+AGG | + | tig0029230:17630-17649 | Msa1441120:intergenic | 40.0% | |
| CTTTGCCTGGGAAGATATAA+TGG | - | tig0029230:17698-17717 | Msa1441120:intron | 40.0% | |
| !! | TTCCTCAATCATTTTGGGGA+GGG | - | tig0029230:17868-17887 | Msa1441120:intron | 40.0% |
| !! | TTTTGGGGAGGGAGATATTA+TGG | - | tig0029230:17879-17898 | Msa1441120:intron | 40.0% |
| ! | AATGCATGGATGCCTTTTGA+AGG | + | tig0029230:17943-17962 | Msa1441120:intergenic | 40.0% |
| TACTCCATCTTCCTTTACTC+AGG | + | tig0029230:17972-17991 | Msa1441120:intergenic | 40.0% | |
| GGACCATACAAAACAAACAG+GGG | + | tig0029230:18081-18100 | Msa1441120:intergenic | 40.0% | |
| CTGACATTTGAAGGCTTACT+GGG | + | tig0029230:18173-18192 | Msa1441120:intergenic | 40.0% | |
| ACTGACATTTGAAGGCTTAC+TGG | + | tig0029230:18174-18193 | Msa1441120:intergenic | 40.0% | |
| AGTAAGCCTTCAAATGTCAG+TGG | - | tig0029230:18173-18192 | Msa1441120:intron | 40.0% | |
| TTCTCAAATAAGTCAGAGGG+AGG | - | tig0029230:18236-18255 | Msa1441120:CDS | 40.0% | |
| AGTATATCAGCTGATGTGCA+AGG | - | tig0029230:18368-18387 | Msa1441120:CDS | 40.0% | |
| CTATACAATGATCTTCGCCA+AGG | - | tig0029230:18535-18554 | Msa1441120:CDS | 40.0% | |
| GCCAAGGTCTGATAAAATTC+CGG | - | tig0029230:18551-18570 | Msa1441120:CDS | 40.0% | |
| CCAAGGTCTGATAAAATTCC+GGG | - | tig0029230:18552-18571 | Msa1441120:CDS | 40.0% | |
| CAAGGTCTGATAAAATTCCG+GGG | - | tig0029230:18553-18572 | Msa1441120:CDS | 40.0% | |
| TAAAACTAAAAGGGTAGCCC+CGG | + | tig0029230:18573-18592 | Msa1441120:intergenic | 40.0% | |
| GGTCGTTGCATCGTAATTGT+TGG | - | tig0029230:12974-12993 | Msa1441120:three_prime_UTR | 45.0% | |
| CTCAACTTCCCCAAAGATGA+AGG | - | tig0029230:13009-13028 | Msa1441120:three_prime_UTR | 45.0% | |
| AACTTCCCCAAAGATGAAGG+TGG | - | tig0029230:13012-13031 | Msa1441120:three_prime_UTR | 45.0% | |
| TGCAACCACCTTCATCTTTG+GGG | + | tig0029230:13020-13039 | Msa1441120:intergenic | 45.0% | |
| GTGCAACCACCTTCATCTTT+GGG | + | tig0029230:13021-13040 | Msa1441120:intergenic | 45.0% | |
| AGTGCAACCACCTTCATCTT+TGG | + | tig0029230:13022-13041 | Msa1441120:intergenic | 45.0% | |
| ! | AAGGTGGTTGCACTTGTTAG+CGG | - | tig0029230:13028-13047 | Msa1441120:three_prime_UTR | 45.0% |
| GTATGGGATTGCCATTGTTC+AGG | - | tig0029230:13209-13228 | Msa1441120:three_prime_UTR | 45.0% | |
| !! | AGGGAATCTGCCTTTTGACT+TGG | + | tig0029230:13324-13343 | Msa1441120:intergenic | 45.0% |
| GAACACACAGCAGTAACAGA+GGG | + | tig0029230:13343-13362 | Msa1441120:intergenic | 45.0% | |
| AGAACACACAGCAGTAACAG+AGG | + | tig0029230:13344-13363 | Msa1441120:intergenic | 45.0% | |
| TCTGTTACTGCTGTGTGTTC+TGG | - | tig0029230:13343-13362 | Msa1441120:CDS | 45.0% | |
| !! | GTGTCGAAAGTGTTTGTTCG+AGG | - | tig0029230:13395-13414 | Msa1441120:CDS | 45.0% |
| GCTTGATGAGGATGTTGTGT+TGG | - | tig0029230:13557-13576 | Msa1441120:intron | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | tig0029230:13565-13584 | Msa1441120:intron | 45.0% | |
| ! | AGCAAGGAGCGTAAATCAGA+TGG | - | tig0029230:13719-13738 | Msa1441120:intron | 45.0% |
| TTCCTCTGTCTCTAGTGATC+TGG | + | tig0029230:13755-13774 | Msa1441120:intergenic | 45.0% | |
| GGTCTTGACCAGATTGCAAA+TGG | - | tig0029230:13947-13966 | Msa1441120:CDS | 45.0% | |
| AGCTCCTCAACCGATATCAA+TGG | - | tig0029230:14138-14157 | Msa1441120:CDS | 45.0% | |
| ATTTCACAAGGTAGCTGCCA+TGG | - | tig0029230:14375-14394 | Msa1441120:intron | 45.0% | |
| TTTCACAAGGTAGCTGCCAT+GGG | - | tig0029230:14376-14395 | Msa1441120:intron | 45.0% | |
| ! | TTTGGATCCTGCAAAGCACT+TGG | - | tig0029230:14399-14418 | Msa1441120:intron | 45.0% |
| ! | TTGGATCCTGCAAAGCACTT+GGG | - | tig0029230:14400-14419 | Msa1441120:intron | 45.0% |
| TCTTTACCCAAGTGCTTTGC+AGG | + | tig0029230:14409-14428 | Msa1441120:intergenic | 45.0% | |
| AAATGTTTGCGGAGAAGGAG+GGG | - | tig0029230:14605-14624 | Msa1441120:intron | 45.0% | |
| TTAACCACACCAATGGTGGT+AGG | + | tig0029230:14676-14695 | Msa1441120:intergenic | 45.0% | |
| TCAGTTAACCACACCAATGG+TGG | + | tig0029230:14680-14699 | Msa1441120:intergenic | 45.0% | |
| TCCTACAGGAGCTATGGAAT+CGG | + | tig0029230:14977-14996 | Msa1441120:intergenic | 45.0% | |
| ACACATTCTCCATGTGTTGC+TGG | - | tig0029230:15217-15236 | Msa1441120:intron | 45.0% | |
| ATCTTGCAACCAGCAACACA+TGG | + | tig0029230:15229-15248 | Msa1441120:intergenic | 45.0% | |
| !! | TAGCAGCGTTTGATTTTGGC+TGG | - | tig0029230:15403-15422 | Msa1441120:intron | 45.0% |
| !!! | AGCAGCGTTTGATTTTGGCT+GGG | - | tig0029230:15404-15423 | Msa1441120:intron | 45.0% |
| TTCGAGATGGTACGCCAAAT+GGG | + | tig0029230:15524-15543 | Msa1441120:intergenic | 45.0% | |
| !! | AGGGCATTGTAACTAGGAGT+TGG | - | tig0029230:16264-16283 | Msa1441120:CDS | 45.0% |
| ! | GGGCATTGTAACTAGGAGTT+GGG | - | tig0029230:16265-16284 | Msa1441120:CDS | 45.0% |
| GGCATTGTAACTAGGAGTTG+GGG | - | tig0029230:16266-16285 | Msa1441120:CDS | 45.0% | |
| GTGAAGTATACCCTCATGCA+AGG | + | tig0029230:16481-16500 | Msa1441120:intergenic | 45.0% | |
| ! | GCATGAGGGTATACTTCACA+TGG | - | tig0029230:16482-16501 | Msa1441120:CDS | 45.0% |
| CTGCAAAGATTCATGGTAGG+AGG | + | tig0029230:16528-16547 | Msa1441120:intergenic | 45.0% | |
| CCACTGCAAAGATTCATGGT+AGG | + | tig0029230:16531-16550 | Msa1441120:intergenic | 45.0% | |
| CCTACCATGAATCTTTGCAG+TGG | - | tig0029230:16528-16547 | Msa1441120:CDS | 45.0% | |
| ACCATGAATCTTTGCAGTGG+AGG | - | tig0029230:16531-16550 | Msa1441120:CDS | 45.0% | |
| GAAGCCCATTCTTTATGTCG+AGG | - | tig0029230:17377-17396 | Msa1441120:intron | 45.0% | |
| CCCATTCTTTATGTCGAGGA+TGG | - | tig0029230:17381-17400 | Msa1441120:intron | 45.0% | |
| !! | CTTCCTCAATCATTTTGGGG+AGG | - | tig0029230:17867-17886 | Msa1441120:intron | 45.0% |
| TACTCAGGCCCAAAAATGCA+TGG | + | tig0029230:17957-17976 | Msa1441120:intergenic | 45.0% | |
| !! | GCATTTTTGGGCCTGAGTAA+AGG | - | tig0029230:17958-17977 | Msa1441120:intron | 45.0% |
| !!! | CTGCCCCTGTTTGTTTTGTA+TGG | - | tig0029230:18075-18094 | Msa1441120:intron | 45.0% |
| CTCATGTCATGCAGAGTTTG+AGG | - | tig0029230:18139-18158 | Msa1441120:intron | 45.0% | |
| TCAGCTCCACTGACATTTGA+AGG | + | tig0029230:18182-18201 | Msa1441120:intergenic | 45.0% | |
| ATAGTTCCTGTTACAGGTGC+TGG | - | tig0029230:18285-18304 | Msa1441120:CDS | 45.0% | |
| TAGTTCCTGTTACAGGTGCT+GGG | - | tig0029230:18286-18305 | Msa1441120:CDS | 45.0% | |
| GCAGGTCACTACATCATCTA+TGG | + | tig0029230:18325-18344 | Msa1441120:intergenic | 45.0% | |
| TGTAGTGACCTGCGAATTAC+TGG | - | tig0029230:18332-18351 | Msa1441120:CDS | 45.0% | |
| TTTCTGAGCCAGTAATTCGC+AGG | + | tig0029230:18343-18362 | Msa1441120:intergenic | 45.0% | |
| ! | CCCGGAATTTTATCAGACCT+TGG | + | tig0029230:18555-18574 | Msa1441120:intergenic | 45.0% |
| !! | TAATTAAAAAAATATCAAAT+AGG | - | tig0029230:18434-18453 | Msa1441120:CDS | 5.0% |
| AACTGGCATCAGATTCGCCA+AGG | + | tig0029230:13113-13132 | Msa1441120:intergenic | 50.0% | |
| TCGTCGACGGAATCATCAAC+TGG | + | tig0029230:13130-13149 | Msa1441120:intergenic | 50.0% | |
| GTAGCTATCGAGTTCGTCGA+CGG | + | tig0029230:13143-13162 | Msa1441120:intergenic | 50.0% | |
| TGGGATTGCCATTGTTCAGG+AGG | - | tig0029230:13212-13231 | Msa1441120:three_prime_UTR | 50.0% | |
| ACTGATTGGGGTCAGCTACA+AGG | + | tig0029230:13865-13884 | Msa1441120:intergenic | 50.0% | |
| TTGTAGCTGACCCCAATCAG+TGG | - | tig0029230:13864-13883 | Msa1441120:intron | 50.0% | |
| CTTTGCAGGATCCAAACCCA+TGG | + | tig0029230:14395-14414 | Msa1441120:intergenic | 50.0% | |
| AGTTCCTACCACCATTGGTG+TGG | - | tig0029230:14669-14688 | Msa1441120:intron | 50.0% | |
| TCCGATTCCATAGCTCCTGT+AGG | - | tig0029230:14973-14992 | Msa1441120:CDS | 50.0% | |
| AAGGACTCCTACAGGAGCTA+TGG | + | tig0029230:14983-15002 | Msa1441120:intergenic | 50.0% | |
| AAGGGATGAAGGACTCCTAC+AGG | + | tig0029230:14991-15010 | Msa1441120:intergenic | 50.0% | |
| TGTAGGAGTCCTTCATCCCT+TGG | - | tig0029230:14990-15009 | Msa1441120:CDS | 50.0% | |
| CTTCGAGATGGTACGCCAAA+TGG | + | tig0029230:15525-15544 | Msa1441120:intergenic | 50.0% | |
| TGCGTGTTTACCTGGCTGTA+TGG | + | tig0029230:15678-15697 | Msa1441120:intergenic | 50.0% | |
| TTGCAGGCAACCTTGCATGA+GGG | - | tig0029230:16468-16487 | Msa1441120:CDS | 50.0% | |
| ! | GAGGGTATACTTCACATGGC+TGG | - | tig0029230:16486-16505 | Msa1441120:CDS | 50.0% |
| ! | ACTTCACATGGCTGGTCAAC+TGG | - | tig0029230:16494-16513 | Msa1441120:CDS | 50.0% |
| ! | CTTCACATGGCTGGTCAACT+GGG | - | tig0029230:16495-16514 | Msa1441120:CDS | 50.0% |
| ! | TTCACATGGCTGGTCAACTG+GGG | - | tig0029230:16496-16515 | Msa1441120:CDS | 50.0% |
| GCCTCCACTGCAAAGATTCA+TGG | + | tig0029230:16535-16554 | Msa1441120:intergenic | 50.0% | |
| GGGGTTTCAAGCACGAAAGT+TGG | - | tig0029230:17463-17482 | Msa1441120:intron | 50.0% | |
| CTCCCTCCCCAAAATGATTG+AGG | + | tig0029230:17873-17892 | Msa1441120:intergenic | 50.0% | |
| TGGGCCTGAGTAAAGGAAGA+TGG | - | tig0029230:17965-17984 | Msa1441120:intron | 50.0% | |
| ! | GTGGTTGCACTTGTTAGCGG+CGG | - | tig0029230:13031-13050 | Msa1441120:three_prime_UTR | 55.0% |
| CGCCAGATCACTAGAGACAG+AGG | - | tig0029230:13750-13769 | Msa1441120:intron | 55.0% | |
| CAAGGTAGCTGCCATGGGTT+TGG | - | tig0029230:14381-14400 | Msa1441120:intron | 55.0% | |
| !! | ACACAGGAGAGGTGCCCATT+TGG | - | tig0029230:15507-15526 | Msa1441120:intron | 55.0% |
| AGTTGGGCACCTAGCTGCAT+TGG | - | tig0029230:15651-15670 | Msa1441120:intron | 55.0% | |
| GTTGGGCACCTAGCTGCATT+GGG | - | tig0029230:15652-15671 | Msa1441120:intron | 55.0% | |
| CTGTATGGCCCAATGCAGCT+AGG | + | tig0029230:15663-15682 | Msa1441120:intergenic | 55.0% | |
| GCTAGCAGTGCGTGTTTACC+TGG | + | tig0029230:15686-15705 | Msa1441120:intergenic | 55.0% | |
| CTTGCAGGCAACCTTGCATG+AGG | - | tig0029230:16467-16486 | Msa1441120:CDS | 55.0% | |
| AATCTTTGCAGTGGAGGCCC+TGG | - | tig0029230:16537-16556 | Msa1441120:CDS | 55.0% | |
| ATCTTTGCAGTGGAGGCCCT+GGG | - | tig0029230:16538-16557 | Msa1441120:CDS | 55.0% | |
| CCTGTTCCAGTTCAACCCCA+GGG | + | tig0029230:16557-16576 | Msa1441120:intergenic | 55.0% | |
| !! | TTCCTGTTACAGGTGCTGGG+CGG | - | tig0029230:18289-18308 | Msa1441120:CDS | 55.0% |
| TCGCCAAGGCGACGATCTGA+TGG | + | tig0029230:13099-13118 | Msa1441120:intergenic | 60.0% | |
| CTGCATTGGGCCATACAGCC+AGG | - | tig0029230:15665-15684 | Msa1441120:intron | 60.0% | |
| TCTTTGCAGTGGAGGCCCTG+GGG | - | tig0029230:16539-16558 | Msa1441120:CDS | 60.0% | |
| CCCTGGGGTTGAACTGGAAC+AGG | - | tig0029230:16554-16573 | Msa1441120:CDS | 60.0% | |
| GCCTGTTCCAGTTCAACCCC+AGG | + | tig0029230:16558-16577 | Msa1441120:intergenic | 60.0% | |
| AACCGCCCAGCACCTGTAAC+AGG | + | tig0029230:18294-18313 | Msa1441120:intergenic | 60.0% | |
| TACCGGCGCTGCTGCTCTAC+CGG | - | tig0029230:12953-12972 | Msa1441120:three_prime_UTR | 65.0% | |
| CGGCCATCAGATCGTCGCCT+TGG | - | tig0029230:13093-13112 | Msa1441120:three_prime_UTR | 65.0% | |
| TGGAGGCCCTGGGGTTGAAC+TGG | - | tig0029230:16548-16567 | Msa1441120:CDS | 65.0% | |
| GACCGGTAGAGCAGCAGCGC+CGG | + | tig0029230:12958-12977 | Msa1441120:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029230 | gene | 12925 | 18732 | 12925 | ID=Msa1441120;Name=Msa1441120 |
| tig0029230 | mRNA | 12925 | 18732 | 12925 | ID=Msa1441120-mRNA-1;Parent=Msa1441120;Name=Msa1441120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=100|1|1|1|1|1|9|364|740 |
| tig0029230 | exon | 12925 | 13504 | 12925 | ID=Msa1441120-mRNA-1:exon:12645;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 13938 | 14295 | 13938 | ID=Msa1441120-mRNA-1:exon:12644;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 14846 | 15183 | 14846 | ID=Msa1441120-mRNA-1:exon:12643;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 15971 | 16305 | 15971 | ID=Msa1441120-mRNA-1:exon:12642;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 16399 | 16729 | 16399 | ID=Msa1441120-mRNA-1:exon:12641;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 16992 | 17064 | 16992 | ID=Msa1441120-mRNA-1:exon:12640;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 17190 | 17272 | 17190 | ID=Msa1441120-mRNA-1:exon:12639;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 17666 | 17698 | 17666 | ID=Msa1441120-mRNA-1:exon:12638;Parent=Msa1441120-mRNA-1 |
| tig0029230 | exon | 18177 | 18732 | 18177 | ID=Msa1441120-mRNA-1:exon:12637;Parent=Msa1441120-mRNA-1 |
| tig0029230 | five_prime_UTR | 18633 | 18732 | 18633 | ID=Msa1441120-mRNA-1:five_prime_utr;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 18177 | 18632 | 18177 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 17666 | 17698 | 17666 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 17190 | 17272 | 17190 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 16992 | 17064 | 16992 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 16399 | 16729 | 16399 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 15971 | 16305 | 15971 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 14846 | 15183 | 14846 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 13938 | 14295 | 13938 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | CDS | 13289 | 13504 | 13289 | ID=Msa1441120-mRNA-1:cds;Parent=Msa1441120-mRNA-1 |
| tig0029230 | three_prime_UTR | 12925 | 13288 | 12925 | ID=Msa1441120-mRNA-1:three_prime_utr;Parent=Msa1441120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
