AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1442870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442870 MtrunA17_Chr3g0128881 97.269 659 13 1 1 654 1 659 0.0 1330
Msa1442870 MtrunA17_Chr3g0128901 89.755 654 53 2 1 654 1 640 0.0 1169
Msa1442870 MtrunA17_Chr5g0432571 53.390 354 157 4 13 360 28 379 3.00e-115 369
Msa1442870 MtrunA17_Chr8g0347181 49.333 375 170 7 5 363 11 381 6.45e-108 359
Msa1442870 MtrunA17_Chr3g0126481 40.934 364 201 7 7 359 4 364 1.53e-86 291
Msa1442870 MtrunA17_Chr3g0128871 73.729 118 19 1 716 821 49 166 3.83e-45 168
Msa1442870 MtrunA17_Chr7g0245121 62.637 91 22 1 728 806 43 133 2.40e-26 112
Msa1442870 MtrunA17_Chr7g0245111 59.341 91 25 1 728 806 44 134 4.25e-25 108
Msa1442870 MtrunA17_Chr1g0188761 48.571 105 42 1 726 818 44 148 1.50e-24 107
Msa1442870 MtrunA17_Chr1g0188751 49.091 110 44 1 722 819 44 153 2.73e-24 106
Msa1442870 MtrunA17_Chr6g0478231 58.140 86 24 1 728 801 58 143 4.62e-23 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442870 AT3G56320.1 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT3G56320.6 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT3G56320.3 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT3G56320.7 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT3G56320.2 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT3G56320.5 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT3G56320.4 47.593 540 258 10 21 546 35 563 4.25e-156 469
Msa1442870 AT2G40520.1 45.203 469 225 8 21 483 28 470 4.17e-129 396
Msa1442870 AT2G40520.4 45.203 469 225 8 21 483 28 470 4.17e-129 396
Msa1442870 AT2G40520.2 45.203 469 225 8 21 483 28 470 4.17e-129 396
Msa1442870 AT2G40520.6 45.203 469 225 8 21 483 28 470 4.17e-129 396
Msa1442870 AT2G40520.3 45.203 469 225 8 21 483 28 470 4.17e-129 396
Msa1442870 AT2G40520.5 45.203 469 225 8 21 483 28 470 4.17e-129 396
Msa1442870 AT3G51620.3 53.846 351 157 3 24 369 32 382 1.20e-116 373
Msa1442870 AT3G51620.2 53.846 351 157 3 24 369 32 382 1.25e-116 374
Msa1442870 AT3G61690.2 48.305 354 168 6 21 363 34 383 2.05e-98 333
Msa1442870 AT3G61690.3 48.305 354 168 6 21 363 34 383 3.14e-98 333
Msa1442870 AT3G61690.1 48.305 354 168 6 21 363 34 383 3.14e-98 333
Msa1442870 AT3G56310.1 61.864 118 33 1 716 821 53 170 4.39e-35 139
Msa1442870 AT3G51620.1 49.020 153 76 2 219 369 169 321 5.89e-35 143
Msa1442870 AT3G51620.1 51.079 139 65 1 24 159 32 170 3.05e-33 137
Msa1442870 AT3G56310.2 61.321 106 29 1 716 821 53 146 6.95e-30 123
Msa1442870 AT5G08380.2 63.953 86 19 1 728 801 46 131 2.29e-27 114
Msa1442870 AT5G08380.1 63.953 86 19 1 728 801 46 131 8.59e-27 114
Msa1442870 AT5G08370.2 61.628 86 21 1 728 801 6 91 2.06e-26 112
Msa1442870 AT5G08370.1 61.628 86 21 1 728 801 32 117 2.85e-26 112

Find 245 sgRNAs with CRISPR-Local

Find 536 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTATGCTCTGCGCTTTC+TGG 0.124072 tig0030216:-13255 Msa1442870:CDS
TTCCCAAACTCAGTTCTTTC+AGG 0.177073 tig0030216:+10893 None:intergenic
GGATGAGGAGCTTTGGTTTA+TGG 0.181696 tig0030216:-14759 Msa1442870:CDS
TAACACTTACCAACAATTTC+TGG 0.199754 tig0030216:+12278 None:intergenic
GTGCGTCTTCCTCACAATTC+CGG 0.233458 tig0030216:+16062 None:intergenic
AACATATGCAGTTGAAATAT+TGG 0.240077 tig0030216:-12538 Msa1442870:CDS
ACTTATGGCCTTGAAGAAAT+AGG 0.248024 tig0030216:-11369 Msa1442870:CDS
TCCTTTCCCATTTCTATTCA+AGG 0.257627 tig0030216:+11701 None:intergenic
AGCAAAACGACATATTAATT+TGG 0.259753 tig0030216:-16245 Msa1442870:five_prime_UTR
AAGAATTATGTCACCATATA+TGG 0.263874 tig0030216:-12323 Msa1442870:CDS
CTTTGTTCCCAATGTCTTAG+AGG 0.266003 tig0030216:+10837 None:intergenic
ATCGAATTGGATTCGCTCTT+AGG 0.267225 tig0030216:-11806 Msa1442870:CDS
AGTGATATTTGATCTGAAAA+TGG 0.269893 tig0030216:+9988 None:intergenic
TGCGTCTTCCTCACAATTCC+GGG 0.285766 tig0030216:+16063 None:intergenic
GAGTCCAGCCATCTGATTAA+AGG 0.288341 tig0030216:+13274 None:intergenic
AGGCTGATTGGAGGTTACTA+TGG 0.289238 tig0030216:-14647 Msa1442870:CDS
TATCAATGAAACAGTTATTA+AGG 0.292822 tig0030216:-9761 Msa1442870:CDS
ATGAACACCTTGAATAGAAA+TGG 0.297585 tig0030216:-11708 Msa1442870:CDS
ATCCCTGAAAGAACTGAGTT+TGG 0.303245 tig0030216:-10896 Msa1442870:CDS
AAGGAGATCCTTAAGCTTCC+AGG 0.314389 tig0030216:-11765 Msa1442870:CDS
CTTTGAGAGCTCAAAGGACT+TGG 0.318106 tig0030216:+11044 None:intergenic
CAAGATGTTAATGTACTTGA+TGG 0.323385 tig0030216:+12056 None:intergenic
AGTTGTATTTGTAGTGTTAT+TGG 0.327211 tig0030216:+16323 None:intergenic
GATGTTCCTATTCCTGCATT+TGG 0.330206 tig0030216:-11663 Msa1442870:CDS
GGGAACAAAGGATCAGAAAA+AGG 0.342380 tig0030216:-10875 Msa1442870:CDS
CATCAAGTACATTAACATCT+TGG 0.350644 tig0030216:-12055 Msa1442870:CDS
GGGAACAAAGGATCGGAAAA+AGG 0.355073 tig0030216:-10824 Msa1442870:CDS
TATTATGAGAGCCGAATTCT+TGG 0.355737 tig0030216:-12582 Msa1442870:CDS
TTCTTTGTCCTGGAAGCTTA+AGG 0.356817 tig0030216:+11757 None:intergenic
GCAGCACTCGGGCTTGAATC+TGG 0.357456 tig0030216:-8401 Msa1442870:CDS
CCAGTACCAAATGCAGGAAT+AGG 0.362227 tig0030216:+11657 None:intergenic
TCTGAAGAGCCTGTCCTTGT+TGG 0.364547 tig0030216:-11630 Msa1442870:CDS
GTTCCTCCACAGCCAACTTA+TGG 0.367868 tig0030216:-11384 Msa1442870:CDS
ATAGGGAAATCGCGAGGAAC+AGG 0.368015 tig0030216:-11351 Msa1442870:CDS
TAAGGCTTGTGGACCATATA+TGG 0.369108 tig0030216:+12310 None:intergenic
TTTGAGGCGATGAAGAATTC+TGG 0.369752 tig0030216:+10953 None:intergenic
GCAGGCAATTTACATCGAAT+TGG 0.370855 tig0030216:-11819 Msa1442870:intron
GTTTGGTGCTCGAAAGCTTA+AGG 0.371049 tig0030216:-11784 Msa1442870:CDS
CTCTATGATACTTCAAACTA+TGG 0.373778 tig0030216:-9967 Msa1442870:CDS
CCTATTCCTGCATTTGGTAC+TGG 0.379307 tig0030216:-11657 Msa1442870:CDS
GCGATTTCCCTATTTCTTCA+AGG 0.381372 tig0030216:+11361 None:intergenic
TAACTGCAGGTATTCGTGTT+TGG 0.384662 tig0030216:-13904 Msa1442870:intron
CTGACAATTAATGGGAGTAT+TGG 0.386485 tig0030216:-16211 Msa1442870:five_prime_UTR
TCCCTGAAAGAACTGAGTTT+GGG 0.388572 tig0030216:-10895 Msa1442870:CDS
TGTTCCAAGTCGGGCATTGC+AGG 0.388800 tig0030216:-10761 Msa1442870:CDS
CTTATGGCCTTGAAGAAATA+GGG 0.389378 tig0030216:-11368 Msa1442870:CDS
TCTCAATGGATGAGGAGCTT+TGG 0.392926 tig0030216:-14766 Msa1442870:CDS
GGAATAGGAACATCAATATC+AGG 0.393746 tig0030216:+11672 None:intergenic
CAATTCCGGGTTCGTGTGTC+GGG 0.393792 tig0030216:+16076 None:intergenic
TGACAATTAATGGGAGTATT+GGG 0.393888 tig0030216:-16210 Msa1442870:five_prime_UTR
GAAACAGTTATTAAGGAAAC+AGG 0.397519 tig0030216:-9754 Msa1442870:intron
ATTGGATTCGCTCTTAGGTT+TGG 0.398308 tig0030216:-11801 Msa1442870:CDS
CAACCTCTCTTGCAAAATTA+CGG 0.400150 tig0030216:-10016 Msa1442870:CDS
AATTTCTGGTAGGGAGGATA+AGG 0.401918 tig0030216:+12292 None:intergenic
TGCTTGCACCACAACAAAAC+TGG 0.406419 tig0030216:-11470 Msa1442870:CDS
CTTTGTTGACACTGCGGCCT+AGG 0.411152 tig0030216:+12010 None:intergenic
TGAAAGTGTTGAAGATGATT+TGG 0.412844 tig0030216:-13821 Msa1442870:CDS
TTTGGCTCTCCCTCCTCAGA+TGG 0.413711 tig0030216:-9923 Msa1442870:CDS
ATCAACTGGGTTGGCCAAGT+TGG 0.413787 tig0030216:-9158 Msa1442870:CDS
TGGTGTAGTAGCGCCTTTAG+AGG 0.414140 tig0030216:+10786 None:intergenic
TTGGCTCTCCCTCCTCAGAT+GGG 0.416248 tig0030216:-9922 Msa1442870:CDS
CATGGTGTGCACCAAGAATT+CGG 0.416862 tig0030216:+12571 None:intergenic
GGCGAAGTCTCGGATGCCTT+TGG 0.417078 tig0030216:+12090 None:intergenic
TGCTCTGCGCTTTCTGGAGC+AGG 0.418440 tig0030216:-13249 Msa1442870:intron
CTTCCACCAGATTACCATTC+CGG 0.418559 tig0030216:-15979 Msa1442870:five_prime_UTR
TTCGCCTCAGAAACAACATT+TGG 0.419282 tig0030216:+14698 None:intergenic
TGTTTCATCCTCTAAGACAT+TGG 0.420260 tig0030216:-10845 Msa1442870:CDS
AATATCTCCATCTGGAAGAT+AGG 0.421218 tig0030216:+13864 None:intergenic
GCTGATGCACTGGTATCAAC+TGG 0.423482 tig0030216:-9172 Msa1442870:CDS
CAAAAGCAATTTACCATGTC+AGG 0.424060 tig0030216:+11318 None:intergenic
GAATTGTGCATAGTACTTCC+CGG 0.426990 tig0030216:+14723 None:intergenic
AACTCGCCGGAATGGTAATC+TGG 0.431804 tig0030216:+15973 None:intergenic
TCAACTGGGTTGGCCAAGTT+GGG 0.433776 tig0030216:-9157 Msa1442870:CDS
GATGGAAATGTCTTACGATC+AGG 0.434606 tig0030216:+8520 None:intergenic
TTGGCATGGACCCTCTTGCA+CGG 0.435377 tig0030216:+11196 None:intergenic
CTCAGGTTGACCAACTTGTC+GGG 0.435786 tig0030216:-12653 Msa1442870:intron
GCTCCACCCATTCTTTGTCC+TGG 0.435917 tig0030216:+11747 None:intergenic
ACTGATTGATATAGACTTTG+TGG 0.442460 tig0030216:-10527 Msa1442870:CDS
ATTATTATTATTCGCACGGC+TGG 0.445515 tig0030216:+11167 None:intergenic
TCCTCCCTACCAGAAATTGT+TGG 0.446497 tig0030216:-12287 Msa1442870:intron
CTCAGACTCTTACTACCTAC+TGG 0.446628 tig0030216:-11224 Msa1442870:intron
TTTCCTGTTCTTTCAAGCAT+TGG 0.448377 tig0030216:-11015 Msa1442870:CDS
ACAATTCCGGGTTCGTGTGT+CGG 0.448580 tig0030216:+16075 None:intergenic
GTTTCATCCTCTAAGACATT+GGG 0.449867 tig0030216:-10844 Msa1442870:CDS
TCCCAAACTCAGTTCTTTCA+GGG 0.453462 tig0030216:+10894 None:intergenic
TGTTGGTTAAGCAAGGAGTA+TGG 0.454180 tig0030216:+14794 None:intergenic
CTCATCATTCATGTCAGTCT+CGG 0.456770 tig0030216:+11071 None:intergenic
GTCCTTCCCATGGACATAAT+CGG 0.457995 tig0030216:+8480 None:intergenic
ATTTAGGGAGAAACTATAAT+CGG 0.460264 tig0030216:-10555 Msa1442870:CDS
CTGATTGATATAGACTTTGT+GGG 0.462623 tig0030216:-10526 Msa1442870:CDS
CGTGTGTCGGGTTGGCGACC+CGG 0.462629 tig0030216:+16088 None:intergenic
GACTTTGTGGGATTAAGTCT+TGG 0.464107 tig0030216:-10514 Msa1442870:CDS
GTCAAGTCAATATCTCCATC+TGG 0.466076 tig0030216:+13856 None:intergenic
GGCTGATTGGAGGTTACTAT+GGG 0.468299 tig0030216:-14646 Msa1442870:CDS
ACTACTACAGCACATTTGAC+TGG 0.470236 tig0030216:-12349 Msa1442870:CDS
TGTAGTGTTATTGGCAGCAA+TGG 0.472585 tig0030216:+16332 None:intergenic
TTTGCCTGCAATGCCCGACT+TGG 0.474276 tig0030216:+10757 None:intergenic
TTGCCAATGCTTGAAAGAAC+AGG 0.474290 tig0030216:+11012 None:intergenic
AATGCCCGACTTGGAACAAC+TGG 0.474339 tig0030216:+10766 None:intergenic
GTTGGCTGTGGAGGAACATT+CGG 0.479529 tig0030216:+11390 None:intergenic
GTGAGGAAGACGCACAGAAT+CGG 0.480119 tig0030216:-16054 Msa1442870:five_prime_UTR
AAAGAGGAGAGCAAGGGGTA+TGG 0.481269 tig0030216:+10455 None:intergenic
TCTCAGGTTGACCAACTTGT+CGG 0.487700 tig0030216:-12654 Msa1442870:intron
TCCGGGTTCGTGTGTCGGGT+TGG 0.489095 tig0030216:+16080 None:intergenic
CCTCAAATATATATCGAGTT+CGG 0.490190 tig0030216:-10937 Msa1442870:CDS
TGTGGGATTAAGTCTTGGTA+AGG 0.490196 tig0030216:-10509 Msa1442870:CDS
TGAACACCTTGAATAGAAAT+GGG 0.494237 tig0030216:-11707 Msa1442870:CDS
TAAGCTTCCAGGACAAAGAA+TGG 0.494792 tig0030216:-11754 Msa1442870:CDS
TACACCAGTTGTTCCAAGTC+GGG 0.500518 tig0030216:-10770 Msa1442870:CDS
TGGCATGGACCCTCTTGCAC+GGG 0.501410 tig0030216:+11197 None:intergenic
GTAGTGTTATTGGCAGCAAT+GGG 0.501601 tig0030216:+16333 None:intergenic
AGATTACCATTCCGGCGAGT+TGG 0.502168 tig0030216:-15971 Msa1442870:five_prime_UTR
GCACTTGCCGATTATGTCCA+TGG 0.503218 tig0030216:-8487 Msa1442870:CDS
TAACCAACAGCTGTTCTCAA+TGG 0.505452 tig0030216:-14780 Msa1442870:CDS
TATCCTTGCAGCTGATGCAC+TGG 0.506012 tig0030216:-9182 Msa1442870:intron
AAATTCACGAGGCGAAGTCT+CGG 0.506262 tig0030216:+12080 None:intergenic
TTCGCACGGCTGGATCTCCT+TGG 0.507327 tig0030216:+11177 None:intergenic
CCGAACTCGATATATATTTG+AGG 0.507941 tig0030216:+10937 None:intergenic
TTTCTGAGGCGAACAGAAAG+AGG 0.508759 tig0030216:-14688 Msa1442870:CDS
TAAACTCTTCCTACAGAAAG+AGG 0.510318 tig0030216:+10439 None:intergenic
ATCTCCTTTAATCAGATGGC+TGG 0.511050 tig0030216:-13278 Msa1442870:CDS
ATGTCTTACGATCAGGGACC+AGG 0.511454 tig0030216:+8527 None:intergenic
TTATGGCTGAAGAGAGGGCC+CGG 0.513461 tig0030216:-14742 Msa1442870:CDS
GGAGACTGTGACAGTTACTA+TGG 0.513710 tig0030216:-11609 Msa1442870:CDS
TGACATCTCCTTTAATCAGA+TGG 0.515391 tig0030216:-13282 Msa1442870:CDS
TACTCGGATGGAGAAGAAGA+TGG 0.516473 tig0030216:-10725 Msa1442870:CDS
AATTGTGCATAGTACTTCCC+GGG 0.517882 tig0030216:+14724 None:intergenic
CGTGATCCAACTCGCCGGAA+TGG 0.518694 tig0030216:+15965 None:intergenic
CAACTGCATATGTTGAGAGC+AGG 0.519594 tig0030216:+12547 None:intergenic
CTGGAATTCATGTTTCCGTA+AGG 0.522101 tig0030216:-8382 None:intergenic
GTATGCAATCTACTTGAAAG+TGG 0.522636 tig0030216:-13790 Msa1442870:CDS
GGTAATCTGGTGGAAGCGGC+CGG 0.523526 tig0030216:+15986 None:intergenic
AAATTGTGGTGATGAGGGAC+TGG 0.525859 tig0030216:+11530 None:intergenic
GGATATGTGCTTTGTTCCAA+AGG 0.526338 tig0030216:-12106 Msa1442870:CDS
CTCTAAGACATTGGGAACAA+AGG 0.528110 tig0030216:-10836 Msa1442870:CDS
TTGGTTTATGGCTGAAGAGA+GGG 0.528132 tig0030216:-14747 Msa1442870:CDS
TCATCATTCATGTCAGTCTC+GGG 0.528603 tig0030216:+11072 None:intergenic
TCAACCAAATGTTGTTTCTG+AGG 0.531314 tig0030216:-14702 Msa1442870:CDS
TTATACTTTGTTTGAAGACA+TGG 0.531505 tig0030216:+12625 None:intergenic
ATTTCTTCAAGGCCATAAGT+TGG 0.531691 tig0030216:+11372 None:intergenic
AGCATCTCATCAATCTGAGC+AGG 0.532090 tig0030216:-10977 Msa1442870:CDS
GCAAGTGCTTTGATTCCTGA+TGG 0.533880 tig0030216:+8502 None:intergenic
TGGCTCTCCCTCCTCAGATG+GGG 0.535062 tig0030216:-9921 Msa1442870:intron
TCAAGGCCATAAGTTGGCTG+TGG 0.535106 tig0030216:+11378 None:intergenic
CTTGGCATATATTCTGATGC+TGG 0.535596 tig0030216:-8452 Msa1442870:CDS
AAAGCATCATGGGCAGCACT+CGG 0.537822 tig0030216:-8413 Msa1442870:CDS
TCACAGTCTCCAACAAGGAC+AGG 0.537823 tig0030216:+11621 None:intergenic
TACTTTCACAAAAGCATCAT+GGG 0.539420 tig0030216:-8423 Msa1442870:CDS
GACGTACACATAACCCAACT+TGG 0.542647 tig0030216:+9144 None:intergenic
GTATAATCTTAGTCAAAGCC+TGG 0.544124 tig0030216:-12608 Msa1442870:CDS
TGGAATTCATGTTTCCGTAA+GGG 0.545353 tig0030216:-8381 None:intergenic
GATCGTAAGACATTTCCATC+AGG 0.548086 tig0030216:-8517 Msa1442870:CDS
AAGCTTCCAGGACAAAGAAT+GGG 0.548125 tig0030216:-11753 Msa1442870:CDS
TACTGGAACGCCCGTGCAAG+AGG 0.549103 tig0030216:-11207 Msa1442870:CDS
GTGCAAGAGGGTCCATGCCA+AGG 0.550294 tig0030216:-11194 Msa1442870:CDS
ACGGCTGGATCTCCTTGGCA+TGG 0.550804 tig0030216:+11182 None:intergenic
CAAGTCCTTTGAGCTCTCAA+AGG 0.550937 tig0030216:-11043 Msa1442870:CDS
GAATGGTAATCTGGTGGAAG+CGG 0.551619 tig0030216:+15982 None:intergenic
TCCGGTGGTTCATCCTCTAA+AGG 0.551979 tig0030216:-10799 Msa1442870:CDS
CTACTTTCACAAAAGCATCA+TGG 0.552246 tig0030216:-8424 Msa1442870:CDS
GCCAACCCGACACACGAACC+CGG 0.552891 tig0030216:-16081 Msa1442870:five_prime_UTR
AGGCCATAAGTTGGCTGTGG+AGG 0.557219 tig0030216:+11381 None:intergenic
AGAACTGAGTTTGGGAACAA+AGG 0.559095 tig0030216:-10887 Msa1442870:CDS
CTACAGAAAGAGGAGAGCAA+GGG 0.560704 tig0030216:+10449 None:intergenic
AAGAATGGGTGGAGCACTTG+AGG 0.561202 tig0030216:-11739 Msa1442870:CDS
AACGGTGGAATCGAGCGTCT+CGG 0.561383 tig0030216:+16031 None:intergenic
GCATCAAATTGTGGTGATGA+GGG 0.561475 tig0030216:+11525 None:intergenic
CCTACAGAAAGAGGAGAGCA+AGG 0.561793 tig0030216:+10448 None:intergenic
CTTACCAACAATTTCTGGTA+GGG 0.561884 tig0030216:+12283 None:intergenic
AGCATCAAATTGTGGTGATG+AGG 0.563396 tig0030216:+11524 None:intergenic
TTGGCATATATTCTGATGCT+GGG 0.564745 tig0030216:-8451 Msa1442870:CDS
ATGGAAATGTCTTACGATCA+GGG 0.566931 tig0030216:+8521 None:intergenic
TTTGGAAGTGTAGGGTGACC+TGG 0.567490 tig0030216:-8545 Msa1442870:intron
GCCTTTAGAGGATGAACCAC+CGG 0.571281 tig0030216:+10798 None:intergenic
GCAAGGGGTATGGAGTCTAA+AGG 0.571557 tig0030216:+10465 None:intergenic
CCATGGGAAGGACTCAAGCT+TGG 0.572955 tig0030216:-8470 Msa1442870:CDS
GCCGCGAAAACGAGTGGGAA+CGG 0.573561 tig0030216:+16013 None:intergenic
TGGTATATGTATTATCATAG+AGG 0.573998 tig0030216:-11450 Msa1442870:CDS
AAGTCGGGCATTGCAGGCAA+AGG 0.574407 tig0030216:-10755 Msa1442870:CDS
ACTTACCAACAATTTCTGGT+AGG 0.575839 tig0030216:+12282 None:intergenic
CTACTACAGCACATTTGACT+GGG 0.576336 tig0030216:-12348 Msa1442870:CDS
GGTAGGGAGGATAAGGCTTG+TGG 0.579729 tig0030216:+12299 None:intergenic
ATCTTCCTTTGAGAGCTCAA+AGG 0.581581 tig0030216:+11038 None:intergenic
GATCACGATTCTGTCTACCT+TGG 0.582371 tig0030216:-15949 Msa1442870:five_prime_UTR
ATCAGTGCGCGGTCCTCTAG+AGG 0.583009 tig0030216:-12487 Msa1442870:intron
TTTGGTTTATGGCTGAAGAG+AGG 0.583512 tig0030216:-14748 Msa1442870:CDS
ACAGCTGTTCTCAATGGATG+AGG 0.584883 tig0030216:-14774 Msa1442870:CDS
AAGCATCATGGGCAGCACTC+GGG 0.586383 tig0030216:-8412 Msa1442870:CDS
GAAACAAACCCCATCTGAGG+AGG 0.589212 tig0030216:+9913 None:intergenic
CAAGAGAAAACAAATAGAAG+AGG 0.591417 tig0030216:-11100 Msa1442870:CDS
GAACAGCTGTTGGTTAAGCA+AGG 0.591655 tig0030216:+14787 None:intergenic
CACTTGCCGATTATGTCCAT+GGG 0.592383 tig0030216:-8486 Msa1442870:CDS
TTTGTTCAGAGGCTGATTGG+AGG 0.592781 tig0030216:-14656 Msa1442870:CDS
AAGACATAACTCACCTCTAG+AGG 0.594984 tig0030216:+12474 None:intergenic
ACCAACAATTTCTGGTAGGG+AGG 0.599391 tig0030216:+12286 None:intergenic
TACAGAAAGAGGAGAGCAAG+GGG 0.599815 tig0030216:+10450 None:intergenic
CGAATTCTTGGTGCACACCA+TGG 0.601306 tig0030216:-12570 Msa1442870:CDS
AGCATATCAGCATCAAATTG+CGG 0.605856 tig0030216:+11489 None:intergenic
GGGCTGTGCAACGAGCGGCA+TGG 0.606132 tig0030216:+11551 None:intergenic
TCTTGCACGGGCGTTCCAGT+AGG 0.608719 tig0030216:+11209 None:intergenic
AGACATTGGGAACAAAGGAT+CGG 0.609090 tig0030216:-10831 Msa1442870:CDS
TATGGCTGAAGAGAGGGCCC+GGG 0.609268 tig0030216:-14741 Msa1442870:CDS
TGTTGTGTAGATGGAACAGC+TGG 0.612253 tig0030216:-9801 Msa1442870:intron
TCGGCTCTCATAATAGCACC+AGG 0.612477 tig0030216:+12590 None:intergenic
GAGAAATCAGAATGCGATGG+AGG 0.613094 tig0030216:-12168 Msa1442870:CDS
GGAATCGCCGCGAAAACGAG+TGG 0.613218 tig0030216:+16007 None:intergenic
ACTCGGATGGAGAAGAAGAT+GGG 0.613497 tig0030216:-10724 Msa1442870:intron
AGCATATCAGCATCAAATTG+TGG 0.614031 tig0030216:+11516 None:intergenic
TCGCCGGAATGGTAATCTGG+TGG 0.614764 tig0030216:+15976 None:intergenic
AGGCAAAGGAGAAGTGTACT+CGG 0.617423 tig0030216:-10741 Msa1442870:CDS
AAAGGAGAAGTGTACTCGGA+TGG 0.622221 tig0030216:-10737 Msa1442870:CDS
CATCCATTGAGAACAGCTGT+TGG 0.622748 tig0030216:+14777 None:intergenic
CTGATGCACTGGTATCAACT+GGG 0.623273 tig0030216:-9171 Msa1442870:CDS
TGCACTGGTATCAACTGGGT+TGG 0.624516 tig0030216:-9167 Msa1442870:CDS
AGAGAAACAAACCCCATCTG+AGG 0.624528 tig0030216:+9910 None:intergenic
AAACAAACCCCATCTGAGGA+GGG 0.625225 tig0030216:+9914 None:intergenic
CTACACCAGTTGTTCCAAGT+CGG 0.625328 tig0030216:-10771 Msa1442870:CDS
CTTCCAGGACAAAGAATGGG+TGG 0.626874 tig0030216:-11750 Msa1442870:CDS
GCAGAGAAATCAGAATGCGA+TGG 0.627043 tig0030216:-12171 Msa1442870:intron
CATACAACAAATACGTGCGC+AGG 0.630522 tig0030216:-13740 Msa1442870:intron
ACTGGAACGCCCGTGCAAGA+GGG 0.631737 tig0030216:-11206 Msa1442870:CDS
TGCCGATTATGTCCATGGGA+AGG 0.634061 tig0030216:-8482 Msa1442870:CDS
CCAAGCTTGAGTCCTTCCCA+TGG 0.635858 tig0030216:+8470 None:intergenic
AATTGTGGTGATGAGGGACT+GGG 0.637522 tig0030216:+11531 None:intergenic
CACACGAACCCGGAATTGTG+AGG 0.649650 tig0030216:-16071 Msa1442870:five_prime_UTR
ATAGAAATGGGAAAGGACAA+AGG 0.653507 tig0030216:-11695 Msa1442870:CDS
ACCTTGAATAGAAATGGGAA+AGG 0.654152 tig0030216:-11702 Msa1442870:CDS
TAGGGAAATCGCGAGGAACA+GGG 0.654764 tig0030216:-11350 Msa1442870:CDS
GGACTGGGCTGTGCAACGAG+CGG 0.654982 tig0030216:+11546 None:intergenic
AGAATCGTGATCCAACTCGC+CGG 0.658236 tig0030216:+15960 None:intergenic
GGATGAAAGAAAGTCTGACT+CGG 0.660418 tig0030216:+11411 None:intergenic
CAATCTACTTGAAAGTGGAG+AGG 0.661750 tig0030216:-13785 Msa1442870:CDS
AACTGTCACAGTCTCCAACA+AGG 0.665217 tig0030216:+11616 None:intergenic
GACTGTGACAGTTACTATGG+CGG 0.665616 tig0030216:-11606 Msa1442870:CDS
AGGGACTTACATACCTGACA+TGG 0.666188 tig0030216:-11331 Msa1442870:intron
TCATTCATGTCAGTCTCGGG+AGG 0.666680 tig0030216:+11075 None:intergenic
GAATCGCCGCGAAAACGAGT+GGG 0.668176 tig0030216:+16008 None:intergenic
CTAGGCCGCAGTGTCAACAA+AGG 0.669859 tig0030216:-12009 Msa1442870:intron
CTGATTGGAGGTTACTATGG+GGG 0.677599 tig0030216:-14644 Msa1442870:CDS
CATATGTTGAGAGCAGGCCA+TGG 0.683524 tig0030216:+12553 None:intergenic
GCTGATTGGAGGTTACTATG+GGG 0.687909 tig0030216:-14645 Msa1442870:CDS
GCGAAAACGAGTGGGAACGG+TGG 0.691551 tig0030216:+16016 None:intergenic
AATTACCTTTGTTGACACTG+CGG 0.695204 tig0030216:+12004 None:intergenic
GAAGAAATAGGGAAATCGCG+AGG 0.719824 tig0030216:-11357 Msa1442870:CDS
TACTTGATGGAAAATTCACG+AGG 0.737950 tig0030216:+12069 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGAAAAAACAATTTTTT+AGG + tig0030216:8917-8936 None:intergenic 10.0%
!!! AAAACTATTTTTTGTTTATT+TGG - tig0030216:9045-9064 Msa1442870:intron 10.0%
!! ATATAAAACATCAATAAATT+TGG + tig0030216:10700-10719 None:intergenic 10.0%
!! AAAAGATAATATGTTTATTA+CGG + tig0030216:10795-10814 None:intergenic 10.0%
!!! AATAAACATATTATCTTTTA+TGG - tig0030216:10796-10815 Msa1442870:CDS 10.0%
!!! ATAAACATATTATCTTTTAT+GGG - tig0030216:10797-10816 Msa1442870:CDS 10.0%
!!! TTTTTTTTTTATGTAGATTT+AGG - tig0030216:14154-14173 Msa1442870:intron 10.0%
!!! TTTTTTTTTATGTAGATTTA+GGG - tig0030216:14155-14174 Msa1442870:intron 10.0%
!!! TTATTTCTTAAATATATCAA+AGG + tig0030216:15935-15954 None:intergenic 10.0%
!!! TATTTTTTGTTTATTTGGTT+TGG - tig0030216:9050-9069 Msa1442870:intron 15.0%
!!! ACATTTTCCTAAATTATTTT+CGG - tig0030216:9704-9723 Msa1442870:intron 15.0%
!!! ATAATGTTTACATAGTTTTT+TGG - tig0030216:10518-10537 Msa1442870:CDS 15.0%
!! TTTAAATTTCAAAAGCTTTA+AGG - tig0030216:10721-10740 Msa1442870:intron 15.0%
!! TATTATTATTATTATTCGCA+CGG + tig0030216:13565-13584 None:intergenic 15.0%
!! TACATAAAAAAAAAAAAGAG+AGG + tig0030216:14149-14168 None:intergenic 15.0%
!! CAATTTATCAAATAAATTTC+TGG - tig0030216:14848-14867 Msa1442870:five_prime_UTR 15.0%
!! TTTAATGAAATAGGAAAATT+AGG - tig0030216:14875-14894 Msa1442870:intron 15.0%
!!! ATGATTTATTTGAAATGATT+TGG - tig0030216:14901-14920 Msa1442870:intron 15.0%
!! AATAAGTAGAAAACATATTA+TGG + tig0030216:15100-15119 None:intergenic 15.0%
!! AATATTAAAATTGTAACAGT+GGG - tig0030216:15629-15648 Msa1442870:intron 15.0%
!! CAAATATATAAATATAGAAG+AGG + tig0030216:15658-15677 None:intergenic 15.0%
!! AAAAAAACACTGACAATTAA+TGG - tig0030216:8505-8524 Msa1442870:CDS 20.0%
!! AAAAAACACTGACAATTAAT+GGG - tig0030216:8506-8525 Msa1442870:CDS 20.0%
!!! CTTGATTTTATAGATTTGTA+TGG - tig0030216:9283-9302 Msa1442870:intron 20.0%
!! TTGTACGAAATTATAATTCT+AGG - tig0030216:9410-9429 Msa1442870:intron 20.0%
!! AAAAACAAACCAAAACAAAA+TGG + tig0030216:9595-9614 None:intergenic 20.0%
!!! ATATTATATGAGTTGGAAAA+AGG + tig0030216:10361-10380 None:intergenic 20.0%
!! TCACAATTATTTATTTACTC+TGG - tig0030216:10615-10634 Msa1442870:intron 20.0%
!! AAACATCAATAAATTTGGAA+TGG + tig0030216:10695-10714 None:intergenic 20.0%
!!! ATTTTTCATTTGCTGTTTTT+TGG - tig0030216:11101-11120 Msa1442870:CDS 20.0%
!! TCATTTAAAAACAAATTCTC+AGG - tig0030216:12055-12074 Msa1442870:CDS 20.0%
!!! ATTAAAGCATCAATTGATTA+CGG - tig0030216:12750-12769 Msa1442870:intron 20.0%
!!! TATATCATCCTAAATGTTTT+TGG - tig0030216:13468-13487 Msa1442870:intron 20.0%
!! CAATATAGACATTAACTTAT+AGG - tig0030216:14028-14047 Msa1442870:intron 20.0%
!! ATAAAAAAAAAAAAGAGAGG+AGG + tig0030216:14146-14165 None:intergenic 20.0%
!!! CTCTTAAGTTTTAATTTATG+TGG - tig0030216:14367-14386 Msa1442870:intron 20.0%
!! TCAAAGATAAATATTCATAG+AGG + tig0030216:14422-14441 None:intergenic 20.0%
!!! TCTGGTATTTTTAATGAAAT+AGG - tig0030216:14866-14885 Msa1442870:intron 20.0%
!! TATCAATGAAACAGTTATTA+AGG - tig0030216:14964-14983 Msa1442870:intron 20.0%
!!! TGTTTTCTACTTATTTCAAT+AGG - tig0030216:15105-15124 Msa1442870:intron 20.0%
!! AATTTCTATATCAAGTCAAA+AGG + tig0030216:15329-15348 None:intergenic 20.0%
!! AAATGCAAAATAAAATCTTG+AGG - tig0030216:15375-15394 Msa1442870:intron 20.0%
!! AATTTCTTTATGAAGTCAAA+AGG - tig0030216:15411-15430 Msa1442870:intron 20.0%
!! AACATATATATCACTCTTAA+CGG + tig0030216:15446-15465 None:intergenic 20.0%
!!! CACTGTTACAATTTTAATAT+TGG + tig0030216:15630-15649 None:intergenic 20.0%
!! CAATATTAAAATTGTAACAG+TGG - tig0030216:15628-15647 Msa1442870:intron 20.0%
!!! CATATGTTAATGTTATGTTT+TGG - tig0030216:15871-15890 Msa1442870:intron 20.0%
! AGTTGTATTTGTAGTGTTAT+TGG + tig0030216:8405-8424 None:intergenic 25.0%
! AGCAAAACGACATATTAATT+TGG - tig0030216:8480-8499 Msa1442870:CDS 25.0%
!! GAAAGTTTTCGTCAATTAAT+TGG - tig0030216:8537-8556 Msa1442870:intron 25.0%
! TTTACCTCAAAAACCAAAAA+AGG + tig0030216:8808-8827 None:intergenic 25.0%
! ATGAAGTTCTTCAATTGAAT+TGG - tig0030216:9312-9331 Msa1442870:intron 25.0%
!! TTCTTCAATTGAATTGGTTT+AGG - tig0030216:9318-9337 Msa1442870:intron 25.0%
! TCACAGTTACAAAATCATTA+GGG + tig0030216:9361-9380 None:intergenic 25.0%
! ATCACAGTTACAAAATCATT+AGG + tig0030216:9362-9381 None:intergenic 25.0%
!!! ACACATTTTCCATTTTGTTT+TGG - tig0030216:9583-9602 Msa1442870:intron 25.0%
!!! TTTGTAGTGTTATTTAACCT+TGG - tig0030216:9829-9848 Msa1442870:intron 25.0%
!!! GATTGCTGTTTAAAATTGAT+TGG - tig0030216:10252-10271 Msa1442870:intron 25.0%
! CAGTATCATATTATATGAGT+TGG + tig0030216:10368-10387 None:intergenic 25.0%
! AATATGATACTGCACAATAT+CGG - tig0030216:10376-10395 Msa1442870:intron 25.0%
! AAAATTCAGCTACAAAGTTT+AGG + tig0030216:10433-10452 None:intergenic 25.0%
!! CTTTGTAGCTGAATTTTAAA+AGG - tig0030216:10436-10455 Msa1442870:intron 25.0%
! GCTTCAATTGAATAATATTG+AGG - tig0030216:10586-10605 Msa1442870:intron 25.0%
!!! TTTGTTGTATGTCTTTTACT+TGG + tig0030216:10976-10995 None:intergenic 25.0%
! ATTTACATCCTATGTGAAAA+AGG - tig0030216:11227-11246 Msa1442870:intron 25.0%
!!! TTCACTTTTTCTCTTTTTCT+CGG - tig0030216:11286-11305 Msa1442870:intron 25.0%
!! TTAAACACAATTTTCCAATC+AGG + tig0030216:11316-11335 None:intergenic 25.0%
!! TAAGACTTCCTTTTTATGTT+TGG - tig0030216:11368-11387 Msa1442870:CDS 25.0%
! TATAAACTGTACAAACTAAC+AGG + tig0030216:11598-11617 None:intergenic 25.0%
! TTGTACAGTTTATATAAAGC+AGG - tig0030216:11604-11623 Msa1442870:CDS 25.0%
! AAAAATGAGTCAAAAAAGAC+AGG + tig0030216:11745-11764 None:intergenic 25.0%
!! TTATACTTTGTTTGAAGACA+TGG + tig0030216:12103-12122 None:intergenic 25.0%
! AACATATGCAGTTGAAATAT+TGG - tig0030216:12187-12206 Msa1442870:intron 25.0%
! TGTAAATACAAATGCTGAAA+GGG + tig0030216:12295-12314 None:intergenic 25.0%
! ATGTAAATACAAATGCTGAA+AGG + tig0030216:12296-12315 None:intergenic 25.0%
! AAGAATTATGTCACCATATA+TGG - tig0030216:12402-12421 Msa1442870:intron 25.0%
!! AAATTGTTGGTAAGTGTTAA+TGG - tig0030216:12451-12470 Msa1442870:intron 25.0%
!! AATTGTTGGTAAGTGTTAAT+GGG - tig0030216:12452-12471 Msa1442870:intron 25.0%
! TGGTATATGTATTATCATAG+AGG - tig0030216:13275-13294 Msa1442870:CDS 25.0%
! AGAAACATCCAAAAACATTT+AGG + tig0030216:13479-13498 None:intergenic 25.0%
! ATTTAGGGAGAAACTATAAT+CGG - tig0030216:14170-14189 Msa1442870:intron 25.0%
! ATTTATGTGGTACAATAATG+TGG - tig0030216:14380-14399 Msa1442870:intron 25.0%
! ATATTTATCTTTGACAAGCA+AGG - tig0030216:14428-14447 Msa1442870:intron 25.0%
! TATTTATCTTTGACAAGCAA+GGG - tig0030216:14429-14448 Msa1442870:intron 25.0%
!!! GTGTTTTTATGATACTTATG+TGG - tig0030216:14451-14470 Msa1442870:intron 25.0%
! CCAAAACATAATTGAATCTT+AGG + tig0030216:14537-14556 None:intergenic 25.0%
!! CCTAAGATTCAATTATGTTT+TGG - tig0030216:14534-14553 Msa1442870:intron 25.0%
! AGTGATATTTGATCTGAAAA+TGG + tig0030216:14740-14759 None:intergenic 25.0%
!!! AGTCGTTTTATAAGCTATTA+TGG + tig0030216:15135-15154 None:intergenic 25.0%
! TCTTACTATATAAGTGCTTA+AGG + tig0030216:15216-15235 None:intergenic 25.0%
! TTCTGTGACAAGAAATTTAA+AGG - tig0030216:15714-15733 Msa1442870:intron 25.0%
! GTATATTCAGTGATATCAAA+AGG + tig0030216:15756-15775 None:intergenic 25.0%
! ATATCACTGAATATACTTGA+GGG - tig0030216:15760-15779 Msa1442870:intron 25.0%
! GTTCCTTACTATATTTGATT+TGG - tig0030216:16162-16181 Msa1442870:five_prime_UTR 25.0%
! CTTCCAAATCAAATATAGTA+AGG + tig0030216:16168-16187 None:intergenic 25.0%
!!! TATATTTGATTTGGAAGTGT+AGG - tig0030216:16171-16190 Msa1442870:five_prime_UTR 25.0%
!!! ATATTTGATTTGGAAGTGTA+GGG - tig0030216:16172-16191 Msa1442870:five_prime_UTR 25.0%
!! TGACAATTAATGGGAGTATT+GGG - tig0030216:8515-8534 Msa1442870:CDS 30.0%
! CTGTATTTGTGTAACGTTTT+TGG + tig0030216:8575-8594 None:intergenic 30.0%
!!! TCTCTCTGTTTTTAAGTAAC+CGG - tig0030216:8618-8637 Msa1442870:intron 30.0%
!!! GAAACCTTTTTTGGTTTTTG+AGG - tig0030216:8801-8820 Msa1442870:intron 30.0%
ATTCTTGTGATTGGACTTAA+TGG - tig0030216:8878-8897 Msa1442870:intron 30.0%
TTCTTGTGATTGGACTTAAT+GGG - tig0030216:8879-8898 Msa1442870:intron 30.0%
!! AGCCTTGTTAAATTCACTTT+AGG - tig0030216:9248-9267 Msa1442870:intron 30.0%
! GCCTTGTTAAATTCACTTTA+GGG - tig0030216:9249-9268 Msa1442870:intron 30.0%
ACCCTAAAGTGAATTTAACA+AGG + tig0030216:9253-9272 None:intergenic 30.0%
GTAGACACCGAAAATAATTT+AGG + tig0030216:9714-9733 None:intergenic 30.0%
AGTACTAACAAGGAAATGAA+TGG + tig0030216:9765-9784 None:intergenic 30.0%
!!! TTAACCTTGGTTTGTTGTTT+TGG - tig0030216:9842-9861 Msa1442870:intron 30.0%
AAAACCAAAACAACAAACCA+AGG + tig0030216:9849-9868 None:intergenic 30.0%
!!! GGATTATTGATTTTGTTCAG+AGG - tig0030216:10058-10077 Msa1442870:intron 30.0%
! TTTTAACCTTCGATTGTTGT+AGG - tig0030216:10137-10156 Msa1442870:intron 30.0%
ATAGAAAGCAAAAAGGGAAA+TGG + tig0030216:10286-10305 None:intergenic 30.0%
GGAAACATAGAAAGCAAAAA+GGG + tig0030216:10292-10311 None:intergenic 30.0%
AGGAAACATAGAAAGCAAAA+AGG + tig0030216:10293-10312 None:intergenic 30.0%
!!! AAGGTTTTATTTTCTGCTCA+AGG + tig0030216:10342-10361 None:intergenic 30.0%
TTAAGATTTGCACCTTTACA+AGG + tig0030216:10499-10518 None:intergenic 30.0%
! CATCAATAAATTTGGAATGG+AGG + tig0030216:10692-10711 None:intergenic 30.0%
!! TGATGAGACCAATTTGTTTT+CGG + tig0030216:10749-10768 None:intergenic 30.0%
!! TGAAAGTGTTGAAGATGATT+TGG - tig0030216:10904-10923 Msa1442870:CDS 30.0%
! AATCTTAAACGCTATTTCAG+AGG + tig0030216:11084-11103 None:intergenic 30.0%
! TCCTTTTTATGTTTGGCAAT+TGG - tig0030216:11375-11394 Msa1442870:CDS 30.0%
TCCAATTGCCAAACATAAAA+AGG + tig0030216:11379-11398 None:intergenic 30.0%
AGCTATAGATATTAAGCACA+CGG + tig0030216:11558-11577 None:intergenic 30.0%
ATTGTTGAGTAGAACTAATG+TGG - tig0030216:11633-11652 Msa1442870:CDS 30.0%
ATTATATCTTATGCCGTGTT+AGG - tig0030216:11685-11704 Msa1442870:CDS 30.0%
TAACACTTACCAACAATTTC+TGG + tig0030216:12450-12469 None:intergenic 30.0%
! ATTGTTGGTAAGTGTTAATG+GGG - tig0030216:12453-12472 Msa1442870:intron 30.0%
! AAGAGCTTCTGAAAAATTAC+AGG - tig0030216:12597-12616 Msa1442870:CDS 30.0%
! AGAGCTTCTGAAAAATTACA+GGG - tig0030216:12598-12617 Msa1442870:CDS 30.0%
CAAGATGTTAATGTACTTGA+TGG + tig0030216:12672-12691 None:intergenic 30.0%
CATCAAGTACATTAACATCT+TGG - tig0030216:12670-12689 Msa1442870:intron 30.0%
!!! AGGTTGTTGTCATTTTTTAG+AGG + tig0030216:12698-12717 None:intergenic 30.0%
CTAAAAAATGACAACAACCT+AGG - tig0030216:12698-12717 Msa1442870:intron 30.0%
ATGAACACCTTGAATAGAAA+TGG - tig0030216:13017-13036 Msa1442870:intron 30.0%
TGAACACCTTGAATAGAAAT+GGG - tig0030216:13018-13037 Msa1442870:intron 30.0%
!!! TACATATACCAGTTTTGTTG+TGG + tig0030216:13266-13285 None:intergenic 30.0%
!! CTCTTCTATTTGTTTTCTCT+TGG + tig0030216:13627-13646 None:intergenic 30.0%
CAAGAGAAAACAAATAGAAG+AGG - tig0030216:13625-13644 Msa1442870:intron 30.0%
CCTCAAATATATATCGAGTT+CGG - tig0030216:13788-13807 Msa1442870:CDS 30.0%
ACTGACTATTATCTTCAAGT+TGG + tig0030216:14122-14141 None:intergenic 30.0%
ACTGATTGATATAGACTTTG+TGG - tig0030216:14198-14217 Msa1442870:intron 30.0%
CTGATTGATATAGACTTTGT+GGG - tig0030216:14199-14218 Msa1442870:intron 30.0%
! AAATATTCATAGAGGTGTGA+AGG + tig0030216:14414-14433 None:intergenic 30.0%
! GTAAAATGAAAAGTGCAACA+CGG + tig0030216:14575-14594 None:intergenic 30.0%
!! TGCTTTGAAACTGTTACTAA+TGG - tig0030216:14597-14616 Msa1442870:intron 30.0%
!! GCTTTGAAACTGTTACTAAT+GGG - tig0030216:14598-14617 Msa1442870:intron 30.0%
!!! CAAACACAACAAAAGTGTTT+TGG - tig0030216:14627-14646 Msa1442870:intron 30.0%
CTCTATGATACTTCAAACTA+TGG - tig0030216:14758-14777 Msa1442870:CDS 30.0%
! TTTTCAGCTTAGTAATGGTT+TGG - tig0030216:14784-14803 Msa1442870:CDS 30.0%
GAAACAGTTATTAAGGAAAC+AGG - tig0030216:14971-14990 Msa1442870:intron 30.0%
TAATTAAGCACTTATGGCAT+AGG + tig0030216:15240-15259 None:intergenic 30.0%
TATGCCATAAGTGCTTAATT+AGG - tig0030216:15239-15258 Msa1442870:intron 30.0%
CGGATTGTTATGATGATTAA+TGG - tig0030216:15294-15313 Msa1442870:intron 30.0%
GCATTTGAAAATCTTGATGA+AGG + tig0030216:15361-15380 None:intergenic 30.0%
GCAAAATAAAATCTTGAGGA+AGG - tig0030216:15379-15398 Msa1442870:intron 30.0%
! AACTGAATTACTGATTGCAT+TGG + tig0030216:15471-15490 None:intergenic 30.0%
GATATCACTGAATATACTTG+AGG - tig0030216:15759-15778 Msa1442870:intron 30.0%
!!! AATGTTATGTTTTGGCTAAG+TGG - tig0030216:15879-15898 Msa1442870:intron 30.0%
TGCACTATTCAATTTCTATG+TGG - tig0030216:16075-16094 Msa1442870:five_prime_UTR 30.0%
!! TACTTTCACAAAAGCATCAT+GGG - tig0030216:16302-16321 Msa1442870:five_prime_UTR 30.0%
! CTGACAATTAATGGGAGTAT+TGG - tig0030216:8514-8533 Msa1442870:CDS 35.0%
!!! CTCTCTGTTTTTAAGTAACC+GGG - tig0030216:8619-8638 Msa1442870:intron 35.0%
! TATGAACTTGTGTTGATCAG+AGG - tig0030216:8851-8870 Msa1442870:intron 35.0%
AGAGGCTAAATTCTTGTGAT+TGG - tig0030216:8869-8888 Msa1442870:intron 35.0%
GTTATGTCGTTCTCATTGTT+TGG - tig0030216:8984-9003 Msa1442870:intron 35.0%
!! TGTTTATTTGGTTTGGAGCT+AGG - tig0030216:9057-9076 Msa1442870:intron 35.0%
!! GTTTATTTGGTTTGGAGCTA+GGG - tig0030216:9058-9077 Msa1442870:intron 35.0%
TTACACGAACTCTTGTAGAA+TGG - tig0030216:9455-9474 Msa1442870:intron 35.0%
TACACGAACTCTTGTAGAAT+GGG - tig0030216:9456-9475 Msa1442870:intron 35.0%
TAGGGGTTAATATCAAGGAT+GGG + tig0030216:9520-9539 None:intergenic 35.0%
ATAGGGGTTAATATCAAGGA+TGG + tig0030216:9521-9540 None:intergenic 35.0%
TGAGATAGGGGTTAATATCA+AGG + tig0030216:9525-9544 None:intergenic 35.0%
! AGAGTGATGAAGTACTAACA+AGG + tig0030216:9775-9794 None:intergenic 35.0%
!!! GTTGTTTTGGTTTTGTTTGC+AGG - tig0030216:9855-9874 Msa1442870:intron 35.0%
!!! GGATATCTGAGTTTTGAGAT+TGG - tig0030216:9876-9895 Msa1442870:intron 35.0%
!! TCAACCAAATGTTGTTTCTG+AGG - tig0030216:10023-10042 Msa1442870:CDS 35.0%
! TATTTTCTGCTCAAGGTATG+AGG + tig0030216:10335-10354 None:intergenic 35.0%
TACAAAGTTTAGGCTGACAT+GGG + tig0030216:10423-10442 None:intergenic 35.0%
TTTGCACCTTTACAAGGTAT+GGG + tig0030216:10493-10512 None:intergenic 35.0%
ATTTGCACCTTTACAAGGTA+TGG + tig0030216:10494-10513 None:intergenic 35.0%
!! TTAAGGTGCCGAAAACAAAT+TGG - tig0030216:10738-10757 Msa1442870:CDS 35.0%
TCATGTGTATACCATTACAG+TGG - tig0030216:10766-10785 Msa1442870:CDS 35.0%
!! ATCTTTTATGGGTTAACTGC+AGG - tig0030216:10808-10827 Msa1442870:CDS 35.0%
!!! CTGGAAGATAGGTTTTTAGT+GGG + tig0030216:10853-10872 None:intergenic 35.0%
!! TCTGGAAGATAGGTTTTTAG+TGG + tig0030216:10854-10873 None:intergenic 35.0%
CTAAAAACCTATCTTCCAGA+TGG - tig0030216:10854-10873 Msa1442870:CDS 35.0%
AATATCTCCATCTGGAAGAT+AGG + tig0030216:10864-10883 None:intergenic 35.0%
GTATGCAATCTACTTGAAAG+TGG - tig0030216:10935-10954 Msa1442870:CDS 35.0%
! TGTCTTTTACTTGGTACTCA+TGG + tig0030216:10967-10986 None:intergenic 35.0%
!! GAAACACTCCTTTTTCACAT+AGG + tig0030216:11238-11257 None:intergenic 35.0%
! TTTTTCTCGGTTTTCCTGAT+TGG - tig0030216:11299-11318 Msa1442870:intron 35.0%
TGACATCTCCTTTAATCAGA+TGG - tig0030216:11443-11462 Msa1442870:CDS 35.0%
GTAGAACTAATGTGGTTAGT+TGG - tig0030216:11641-11660 Msa1442870:CDS 35.0%
TGTAAATGGGAATCCTAACA+CGG + tig0030216:11701-11720 None:intergenic 35.0%
TAGAAACTGTAGGAATGGAA+GGG + tig0030216:11815-11834 None:intergenic 35.0%
AGTAGTAGAAACTGTAGGAA+TGG + tig0030216:11820-11839 None:intergenic 35.0%
AGTCAAGTAGTAGAAACTGT+AGG + tig0030216:11825-11844 None:intergenic 35.0%
ATTCAGTCAGATTGTTGCAA+TGG - tig0030216:11919-11938 Msa1442870:intron 35.0%
! TGGAAAAAGAGAGCATAAAG+AGG + tig0030216:11979-11998 None:intergenic 35.0%
AAAATGTCCTGCTCATATTC+AGG - tig0030216:12014-12033 Msa1442870:CDS 35.0%
GTATAATCTTAGTCAAAGCC+TGG - tig0030216:12117-12136 Msa1442870:CDS 35.0%
TATTATGAGAGCCGAATTCT+TGG - tig0030216:12143-12162 Msa1442870:CDS 35.0%
!! CTTACCAACAATTTCTGGTA+GGG + tig0030216:12445-12464 None:intergenic 35.0%
!! ACTTACCAACAATTTCTGGT+AGG + tig0030216:12446-12465 None:intergenic 35.0%
TACTTGATGGAAAATTCACG+AGG + tig0030216:12659-12678 None:intergenic 35.0%
AATTACCTTTGTTGACACTG+CGG + tig0030216:12724-12743 None:intergenic 35.0%
! AGATGTGGTTTTCACTAAGT+TGG + tig0030216:12812-12831 None:intergenic 35.0%
GTCACTAGCAATTAAAGATG+TGG + tig0030216:12827-12846 None:intergenic 35.0%
ACCTTGAATAGAAATGGGAA+AGG - tig0030216:13023-13042 Msa1442870:intron 35.0%
TCCTTTCCCATTTCTATTCA+AGG + tig0030216:13027-13046 None:intergenic 35.0%
ATAGAAATGGGAAAGGACAA+AGG - tig0030216:13030-13049 Msa1442870:intron 35.0%
GGAATAGGAACATCAATATC+AGG + tig0030216:13056-13075 None:intergenic 35.0%
AGCATATCAGCATCAAATTG+TGG + tig0030216:13212-13231 None:intergenic 35.0%
AGCATATCAGCATCAAATTG+CGG + tig0030216:13212-13231 None:intergenic 35.0%
ATTTCTTCAAGGCCATAAGT+TGG + tig0030216:13356-13375 None:intergenic 35.0%
! ACTTATGGCCTTGAAGAAAT+AGG - tig0030216:13356-13375 Msa1442870:intron 35.0%
! CTTATGGCCTTGAAGAAATA+GGG - tig0030216:13357-13376 Msa1442870:intron 35.0%
CAAAAGCAATTTACCATGTC+AGG + tig0030216:13410-13429 None:intergenic 35.0%
ATTATTATTATTCGCACGGC+TGG + tig0030216:13561-13580 None:intergenic 35.0%
TTTCCTGTTCTTTCAAGCAT+TGG - tig0030216:13710-13729 Msa1442870:intron 35.0%
CCGAACTCGATATATATTTG+AGG + tig0030216:13791-13810 None:intergenic 35.0%
!! TGTTTCATCCTCTAAGACAT+TGG - tig0030216:13880-13899 Msa1442870:CDS 35.0%
!! GTTTCATCCTCTAAGACATT+GGG - tig0030216:13881-13900 Msa1442870:CDS 35.0%
! AGGCATTTTGTAAGATATCG+AGG - tig0030216:14048-14067 Msa1442870:intron 35.0%
TAAACTCTTCCTACAGAAAG+AGG + tig0030216:14289-14308 None:intergenic 35.0%
!! TCATTTCTGCTTCTAAAGTC+CGG - tig0030216:14309-14328 Msa1442870:intron 35.0%
TATGATACTTATGTGGCAAC+CGG - tig0030216:14458-14477 Msa1442870:intron 35.0%
ATCTTAGGAACTGTCTGAAA+TGG + tig0030216:14522-14541 None:intergenic 35.0%
CAACCTCTCTTGCAAAATTA+CGG - tig0030216:14709-14728 Msa1442870:CDS 35.0%
! TTTCCGTAATTTTGCAAGAG+AGG + tig0030216:14715-14734 None:intergenic 35.0%
!! ATGATTTGGTGTTGTGTAGA+TGG - tig0030216:14915-14934 Msa1442870:intron 35.0%
CGTGAATTAGCTATTAGCAA+AGG + tig0030216:15012-15031 None:intergenic 35.0%
!! ACCTCTTTTGAGAAGTCTTA+TGG - tig0030216:15071-15090 Msa1442870:intron 35.0%
ACCATAAGACTTCTCAAAAG+AGG + tig0030216:15075-15094 None:intergenic 35.0%
ACAGCCTAATTAAGCACTTA+TGG + tig0030216:15246-15265 None:intergenic 35.0%
!! ACGTCAATATAGTACTGATC+TGG - tig0030216:15599-15618 Msa1442870:intron 35.0%
TGTCTATCCTGACTTTCAAT+TGG - tig0030216:15826-15845 Msa1442870:intron 35.0%
ATGGAAATGTCTTACGATCA+GGG + tig0030216:16207-16226 None:intergenic 35.0%
TTGGCATATATTCTGATGCT+GGG - tig0030216:16274-16293 Msa1442870:five_prime_UTR 35.0%
!! CTACTTTCACAAAAGCATCA+TGG - tig0030216:16301-16320 Msa1442870:five_prime_UTR 35.0%
! GTAGTGTTATTGGCAGCAAT+GGG + tig0030216:8395-8414 None:intergenic 40.0%
! TGTAGTGTTATTGGCAGCAA+TGG + tig0030216:8396-8415 None:intergenic 40.0%
!!! ACCTTGGCTGAAACCTTTTT+TGG - tig0030216:8792-8811 Msa1442870:intron 40.0%
ACCAAAAAAGGTTTCAGCCA+AGG + tig0030216:8796-8815 None:intergenic 40.0%
TACAAAACAGGTATAGGCAC+AGG + tig0030216:9176-9195 None:intergenic 40.0%
TCCAGCTACAAAACAGGTAT+AGG + tig0030216:9182-9201 None:intergenic 40.0%
TATTTCCAGAACAAACACGC+TGG + tig0030216:9496-9515 None:intergenic 40.0%
!! TGTGTCGGTTCAGTGTTAAA+TGG - tig0030216:9665-9684 Msa1442870:intron 40.0%
!! TCAGTGTTGATGTCAGTGTT+TGG - tig0030216:9736-9755 Msa1442870:intron 40.0%
!!! AGTTTTGAGATTGGCAGCAA+TGG - tig0030216:9885-9904 Msa1442870:intron 40.0%
!!! GTTTTGAGATTGGCAGCAAT+GGG - tig0030216:9886-9905 Msa1442870:intron 40.0%
! TGTTGGTTAAGCAAGGAGTA+TGG + tig0030216:9934-9953 None:intergenic 40.0%
TAACCAACAGCTGTTCTCAA+TGG - tig0030216:9945-9964 Msa1442870:CDS 40.0%
! TTTGGTTTATGGCTGAAGAG+AGG - tig0030216:9977-9996 Msa1442870:CDS 40.0%
TTGGTTTATGGCTGAAGAGA+GGG - tig0030216:9978-9997 Msa1442870:CDS 40.0%
AATTGTGCATAGTACTTCCC+GGG + tig0030216:10004-10023 None:intergenic 40.0%
GAATTGTGCATAGTACTTCC+CGG + tig0030216:10005-10024 None:intergenic 40.0%
TTCGCCTCAGAAACAACATT+TGG + tig0030216:10030-10049 None:intergenic 40.0%
! GATTTTGTTCAGAGGCTGAT+TGG - tig0030216:10066-10085 Msa1442870:intron 40.0%
!! GTAGGAGTGGGTTATGTATT+TGG - tig0030216:10155-10174 Msa1442870:intron 40.0%
! CAAAGTTGCTTTCTTTCCCA+TGG - tig0030216:10195-10214 Msa1442870:intron 40.0%
TGCTTTCTTTCCCATGGATT+TGG - tig0030216:10201-10220 Msa1442870:intron 40.0%
! TTCTTTCCCATGGATTTGGT+TGG - tig0030216:10205-10224 Msa1442870:intron 40.0%
! TCTTTCCCATGGATTTGGTT+GGG - tig0030216:10206-10225 Msa1442870:intron 40.0%
AAACACCCAACCAAATCCAT+GGG + tig0030216:10214-10233 None:intergenic 40.0%
AAAACACCCAACCAAATCCA+TGG + tig0030216:10215-10234 None:intergenic 40.0%
TGACATGGGACAATATTTGC+TGG + tig0030216:10409-10428 None:intergenic 40.0%
CTACAAAGTTTAGGCTGACA+TGG + tig0030216:10424-10443 None:intergenic 40.0%
TATTACGGACACCACTGTAA+TGG + tig0030216:10780-10799 None:intergenic 40.0%
TAACTGCAGGTATTCGTGTT+TGG - tig0030216:10821-10840 Msa1442870:CDS 40.0%
GTCAAGTCAATATCTCCATC+TGG + tig0030216:10872-10891 None:intergenic 40.0%
CAATCTACTTGAAAGTGGAG+AGG - tig0030216:10940-10959 Msa1442870:CDS 40.0%
AAGTAAAGCGATAACTGCAG+TGG + tig0030216:11260-11279 None:intergenic 40.0%
ATCTCCTTTAATCAGATGGC+TGG - tig0030216:11447-11466 Msa1442870:CDS 40.0%
ACAAACTAACAGGAACACGA+GGG + tig0030216:11588-11607 None:intergenic 40.0%
TACAAACTAACAGGAACACG+AGG + tig0030216:11589-11608 None:intergenic 40.0%
AGAAACTGTAGGAATGGAAG+GGG + tig0030216:11814-11833 None:intergenic 40.0%
GTAGAAACTGTAGGAATGGA+AGG + tig0030216:11816-11835 None:intergenic 40.0%
GCAACAATCTGACTGAATAG+AGG + tig0030216:11917-11936 None:intergenic 40.0%
! TGTTTTCATTCATCAGTGCG+CGG - tig0030216:12227-12246 Msa1442870:intron 40.0%
AAGACATAACTCACCTCTAG+AGG + tig0030216:12254-12273 None:intergenic 40.0%
ACTACTACAGCACATTTGAC+TGG - tig0030216:12376-12395 Msa1442870:intron 40.0%
CTACTACAGCACATTTGACT+GGG - tig0030216:12377-12396 Msa1442870:intron 40.0%
TAAGGCTTGTGGACCATATA+TGG + tig0030216:12418-12437 None:intergenic 40.0%
!! AATTTCTGGTAGGGAGGATA+AGG + tig0030216:12436-12455 None:intergenic 40.0%
! GGATATGTGCTTTGTTCCAA+AGG - tig0030216:12619-12638 Msa1442870:CDS 40.0%
ATTCGATGTAAATTGCCTGC+AGG + tig0030216:12906-12925 None:intergenic 40.0%
GCAGGCAATTTACATCGAAT+TGG - tig0030216:12906-12925 Msa1442870:intron 40.0%
ATCGAATTGGATTCGCTCTT+AGG - tig0030216:12919-12938 Msa1442870:intron 40.0%
ATTGGATTCGCTCTTAGGTT+TGG - tig0030216:12924-12943 Msa1442870:intron 40.0%
TTCTTTGTCCTGGAAGCTTA+AGG + tig0030216:12971-12990 None:intergenic 40.0%
TAAGCTTCCAGGACAAAGAA+TGG - tig0030216:12971-12990 Msa1442870:intron 40.0%
AAGCTTCCAGGACAAAGAAT+GGG - tig0030216:12972-12991 Msa1442870:intron 40.0%
GATGTTCCTATTCCTGCATT+TGG - tig0030216:13062-13081 Msa1442870:intron 40.0%
! GATTTTCCAGTACCAAATGC+AGG + tig0030216:13077-13096 None:intergenic 40.0%
! GCATCAAATTGTGGTGATGA+GGG + tig0030216:13203-13222 None:intergenic 40.0%
! AGCATCAAATTGTGGTGATG+AGG + tig0030216:13204-13223 None:intergenic 40.0%
GGATGAAAGAAAGTCTGACT+CGG + tig0030216:13317-13336 None:intergenic 40.0%
TCATCATTCATGTCAGTCTC+GGG + tig0030216:13656-13675 None:intergenic 40.0%
CTCATCATTCATGTCAGTCT+CGG + tig0030216:13657-13676 None:intergenic 40.0%
! ATCTTCCTTTGAGAGCTCAA+AGG + tig0030216:13690-13709 None:intergenic 40.0%
TTGCCAATGCTTGAAAGAAC+AGG + tig0030216:13716-13735 None:intergenic 40.0%
! TTTGAGGCGATGAAGAATTC+TGG + tig0030216:13775-13794 None:intergenic 40.0%
ATCCCTGAAAGAACTGAGTT+TGG - tig0030216:13829-13848 Msa1442870:CDS 40.0%
TCCCTGAAAGAACTGAGTTT+GGG - tig0030216:13830-13849 Msa1442870:CDS 40.0%
TCCCAAACTCAGTTCTTTCA+GGG + tig0030216:13834-13853 None:intergenic 40.0%
TTCCCAAACTCAGTTCTTTC+AGG + tig0030216:13835-13854 None:intergenic 40.0%
AGAACTGAGTTTGGGAACAA+AGG - tig0030216:13838-13857 Msa1442870:CDS 40.0%
GGGAACAAAGGATCAGAAAA+AGG - tig0030216:13850-13869 Msa1442870:CDS 40.0%
CTTTGTTCCCAATGTCTTAG+AGG + tig0030216:13891-13910 None:intergenic 40.0%
!! CTCTAAGACATTGGGAACAA+AGG - tig0030216:13889-13908 Msa1442870:CDS 40.0%
AGACATTGGGAACAAAGGAT+CGG - tig0030216:13894-13913 Msa1442870:CDS 40.0%
AAGGATCGGAAAAAGGATTC+CGG - tig0030216:13908-13927 Msa1442870:intron 40.0%
!! AGTGTTGTGCTTTTTACTGC+AGG - tig0030216:14080-14099 Msa1442870:intron 40.0%
GACTTTGTGGGATTAAGTCT+TGG - tig0030216:14211-14230 Msa1442870:intron 40.0%
TGTGGGATTAAGTCTTGGTA+AGG - tig0030216:14216-14235 Msa1442870:intron 40.0%
CCAATGTACAACAACATCAC+CGG + tig0030216:14331-14350 None:intergenic 40.0%
! CTTGTTTCTCAATGACTTGC+CGG + tig0030216:14480-14499 None:intergenic 40.0%
CCTTTGTACTTCCTCTGTTT+CGG - tig0030216:14669-14688 Msa1442870:CDS 40.0%
!! GGCGTTTTTCAGCTTAGTAA+TGG - tig0030216:14779-14798 Msa1442870:CDS 40.0%
GTATGCACTAAGACACTGTT+TGG + tig0030216:15273-15292 None:intergenic 40.0%
ACAGTGTCTTAGTGCATACA+CGG - tig0030216:15274-15293 Msa1442870:intron 40.0%
TCCTGACTTTCAATTGGATG+AGG - tig0030216:15832-15851 Msa1442870:intron 40.0%
TCCTCATCCAATTGAAAGTC+AGG + tig0030216:15836-15855 None:intergenic 40.0%
CAAAAAACACACCAGCACAT+CGG + tig0030216:15997-16016 None:intergenic 40.0%
GATGGAAATGTCTTACGATC+AGG + tig0030216:16208-16227 None:intergenic 40.0%
GATCGTAAGACATTTCCATC+AGG - tig0030216:16208-16227 Msa1442870:five_prime_UTR 40.0%
CTTGGCATATATTCTGATGC+TGG - tig0030216:16273-16292 Msa1442870:five_prime_UTR 40.0%
GAATGGTAATCTGGTGGAAG+CGG + tig0030216:8746-8765 None:intergenic 45.0%
CTTCCACCAGATTACCATTC+CGG - tig0030216:8746-8765 Msa1442870:intron 45.0%
GATCACGATTCTGTCTACCT+TGG - tig0030216:8776-8795 Msa1442870:intron 45.0%
! GCCTATACCTGTTTTGTAGC+TGG - tig0030216:9178-9197 Msa1442870:intron 45.0%
ACAACTTGAGTGAGGTTGTG+AGG + tig0030216:9557-9576 None:intergenic 45.0%
GTATGCTCACAACTTGAGTG+AGG + tig0030216:9565-9584 None:intergenic 45.0%
ACAAATTCGAGCTGAAGGGT+TGG + tig0030216:9630-9649 None:intergenic 45.0%
GGACACAAATTCGAGCTGAA+GGG + tig0030216:9634-9653 None:intergenic 45.0%
CTTCAGCTCGAATTTGTGTC+CGG - tig0030216:9633-9652 Msa1442870:intron 45.0%
AACACTGAACCGACACAAGT+AGG + tig0030216:9662-9681 None:intergenic 45.0%
! GAACAGCTGTTGGTTAAGCA+AGG + tig0030216:9941-9960 None:intergenic 45.0%
CATCCATTGAGAACAGCTGT+TGG + tig0030216:9951-9970 None:intergenic 45.0%
ACAGCTGTTCTCAATGGATG+AGG - tig0030216:9951-9970 Msa1442870:CDS 45.0%
TCTCAATGGATGAGGAGCTT+TGG - tig0030216:9959-9978 Msa1442870:CDS 45.0%
! GGATGAGGAGCTTTGGTTTA+TGG - tig0030216:9966-9985 Msa1442870:CDS 45.0%
!! TTTCTGAGGCGAACAGAAAG+AGG - tig0030216:10037-10056 Msa1442870:intron 45.0%
TTTGTTCAGAGGCTGATTGG+AGG - tig0030216:10069-10088 Msa1442870:intron 45.0%
AGGCTGATTGGAGGTTACTA+TGG - tig0030216:10078-10097 Msa1442870:intron 45.0%
GGCTGATTGGAGGTTACTAT+GGG - tig0030216:10079-10098 Msa1442870:intron 45.0%
GCTGATTGGAGGTTACTATG+GGG - tig0030216:10080-10099 Msa1442870:intron 45.0%
CTGATTGGAGGTTACTATGG+GGG - tig0030216:10081-10100 Msa1442870:intron 45.0%
ACCTTCGATTGTTGTAGGAG+TGG - tig0030216:10142-10161 Msa1442870:intron 45.0%
CCTTCGATTGTTGTAGGAGT+GGG - tig0030216:10143-10162 Msa1442870:intron 45.0%
GAAGTGCATGGTGTAAAGGA+AGG + tig0030216:10313-10332 None:intergenic 45.0%
! TGAGGAAGTGCATGGTGTAA+AGG + tig0030216:10317-10336 None:intergenic 45.0%
! TCAAGGTATGAGGAAGTGCA+TGG + tig0030216:10325-10344 None:intergenic 45.0%
CACCTTTACAAGGTATGGGA+GGG + tig0030216:10489-10508 None:intergenic 45.0%
CATACAACAAATACGTGCGC+AGG - tig0030216:10985-11004 Msa1442870:CDS 45.0%
ATGTTTGGCAATTGGACTGC+AGG - tig0030216:11383-11402 Msa1442870:CDS 45.0%
GAGTCCAGCCATCTGATTAA+AGG + tig0030216:11454-11473 None:intergenic 45.0%
AGCAAAGCCTGAATATGAGC+AGG + tig0030216:12024-12043 None:intergenic 45.0%
!! TCTCAGGTTGACCAACTTGT+CGG - tig0030216:12071-12090 Msa1442870:CDS 45.0%
! CATGGTTTTTCCCGACAAGT+TGG + tig0030216:12085-12104 None:intergenic 45.0%
CATGGTGTGCACCAAGAATT+CGG + tig0030216:12157-12176 None:intergenic 45.0%
CAACTGCATATGTTGAGAGC+AGG + tig0030216:12181-12200 None:intergenic 45.0%
ACCTGCTAGTAGCAGTAGTT+CGG + tig0030216:12339-12358 None:intergenic 45.0%
!! GCAGGTGCTGTACAGATTTT+TGG - tig0030216:12353-12372 Msa1442870:CDS 45.0%
TCCTCCCTACCAGAAATTGT+TGG - tig0030216:12438-12457 Msa1442870:intron 45.0%
!! ACCAACAATTTCTGGTAGGG+AGG + tig0030216:12442-12461 None:intergenic 45.0%
AATGGGGCTGCATAAGTCAT+TGG - tig0030216:12469-12488 Msa1442870:intron 45.0%
GCAGAGAAATCAGAATGCGA+TGG - tig0030216:12554-12573 Msa1442870:CDS 45.0%
GAGAAATCAGAATGCGATGG+AGG - tig0030216:12557-12576 Msa1442870:CDS 45.0%
AAATTCACGAGGCGAAGTCT+CGG + tig0030216:12648-12667 None:intergenic 45.0%
TTGCTAGTGACAAATGCGTC+TGG - tig0030216:12836-12855 Msa1442870:intron 45.0%
TGCTAGTGACAAATGCGTCT+GGG - tig0030216:12837-12856 Msa1442870:intron 45.0%
! ACCTTTTACCTTTGTCCTGC+AGG - tig0030216:12888-12907 Msa1442870:intron 45.0%
GTAAATTGCCTGCAGGACAA+AGG + tig0030216:12899-12918 None:intergenic 45.0%
!! GTTTGGTGCTCGAAAGCTTA+AGG - tig0030216:12941-12960 Msa1442870:intron 45.0%
AAGGAGATCCTTAAGCTTCC+AGG - tig0030216:12960-12979 Msa1442870:intron 45.0%
CCAGTACCAAATGCAGGAAT+AGG + tig0030216:13071-13090 None:intergenic 45.0%
CCTATTCCTGCATTTGGTAC+TGG - tig0030216:13068-13087 Msa1442870:intron 45.0%
AACTGTCACAGTCTCCAACA+AGG + tig0030216:13112-13131 None:intergenic 45.0%
GGAGACTGTGACAGTTACTA+TGG - tig0030216:13116-13135 Msa1442870:intron 45.0%
GACTGTGACAGTTACTATGG+CGG - tig0030216:13119-13138 Msa1442870:intron 45.0%
! AATTGTGGTGATGAGGGACT+GGG + tig0030216:13197-13216 None:intergenic 45.0%
! AAATTGTGGTGATGAGGGAC+TGG + tig0030216:13198-13217 None:intergenic 45.0%
TGCTTGCACCACAACAAAAC+TGG - tig0030216:13255-13274 Msa1442870:CDS 45.0%
AGGGACTTACATACCTGACA+TGG - tig0030216:13394-13413 Msa1442870:intron 45.0%
CTCAGACTCTTACTACCTAC+TGG - tig0030216:13501-13520 Msa1442870:intron 45.0%
! CTTTGAGAGCTCAAAGGACT+TGG + tig0030216:13684-13703 None:intergenic 45.0%
CAAGTCCTTTGAGCTCTCAA+AGG - tig0030216:13682-13701 Msa1442870:intron 45.0%
AGCATCTCATCAATCTGAGC+AGG - tig0030216:13748-13767 Msa1442870:CDS 45.0%
GGGAACAAAGGATCGGAAAA+AGG - tig0030216:13901-13920 Msa1442870:intron 45.0%
CTACACCAGTTGTTCCAAGT+CGG - tig0030216:13954-13973 Msa1442870:intron 45.0%
TACACCAGTTGTTCCAAGTC+GGG - tig0030216:13955-13974 Msa1442870:intron 45.0%
! AGGCAAAGGAGAAGTGTACT+CGG - tig0030216:13984-14003 Msa1442870:intron 45.0%
! AAAGGAGAAGTGTACTCGGA+TGG - tig0030216:13988-14007 Msa1442870:intron 45.0%
TACTCGGATGGAGAAGAAGA+TGG - tig0030216:14000-14019 Msa1442870:intron 45.0%
ACTCGGATGGAGAAGAAGAT+GGG - tig0030216:14001-14020 Msa1442870:intron 45.0%
TACAGAAAGAGGAGAGCAAG+GGG + tig0030216:14278-14297 None:intergenic 45.0%
CTACAGAAAGAGGAGAGCAA+GGG + tig0030216:14279-14298 None:intergenic 45.0%
CCGGTGATGTTGTTGTACAT+TGG - tig0030216:14328-14347 Msa1442870:intron 45.0%
! CCGAAACAGAGGAAGTACAA+AGG + tig0030216:14672-14691 None:intergenic 45.0%
!! TCTTGCTGTTACCGAAACAG+AGG + tig0030216:14683-14702 None:intergenic 45.0%
AAACAAACCCCATCTGAGGA+GGG + tig0030216:14814-14833 None:intergenic 45.0%
AGAGAAACAAACCCCATCTG+AGG + tig0030216:14818-14837 None:intergenic 45.0%
TGTTGTGTAGATGGAACAGC+TGG - tig0030216:14924-14943 Msa1442870:intron 45.0%
! CTGATGCACTGGTATCAACT+GGG - tig0030216:15554-15573 Msa1442870:intron 45.0%
GACGTACACATAACCCAACT+TGG + tig0030216:15584-15603 None:intergenic 45.0%
TACAATGTGCAGACGATTGC+TGG - tig0030216:15689-15708 Msa1442870:intron 45.0%
ACTTTATGCATCCGATGTGC+TGG - tig0030216:15983-16002 Msa1442870:five_prime_UTR 45.0%
GCAAGTGCTTTGATTCCTGA+TGG + tig0030216:16226-16245 None:intergenic 45.0%
! CACTTGCCGATTATGTCCAT+GGG - tig0030216:16239-16258 Msa1442870:five_prime_UTR 45.0%
GTCCTTCCCATGGACATAAT+CGG + tig0030216:16248-16267 None:intergenic 45.0%
!! TATAAAAATTTAATGTAAAT+GGG + tig0030216:11714-11733 None:intergenic 5.0%
!! ATATAAAAATTTAATGTAAA+TGG + tig0030216:11715-11734 None:intergenic 5.0%
!!! ATTTTTTTAAAAAAATTCAA+TGG + tig0030216:11999-12018 None:intergenic 5.0%
ACAATTCCGGGTTCGTGTGT+CGG + tig0030216:8653-8672 None:intergenic 50.0%
TGCGTCTTCCTCACAATTCC+GGG + tig0030216:8665-8684 None:intergenic 50.0%
GTGCGTCTTCCTCACAATTC+CGG + tig0030216:8666-8685 None:intergenic 50.0%
GTGAGGAAGACGCACAGAAT+CGG - tig0030216:8671-8690 Msa1442870:intron 50.0%
AACTCGCCGGAATGGTAATC+TGG + tig0030216:8755-8774 None:intergenic 50.0%
AGATTACCATTCCGGCGAGT+TGG - tig0030216:8754-8773 Msa1442870:intron 50.0%
AGAATCGTGATCCAACTCGC+CGG + tig0030216:8768-8787 None:intergenic 50.0%
! TGGTTTGGAGCTAGGGTTTC+TGG - tig0030216:9065-9084 Msa1442870:intron 50.0%
CAGCAGTCCAGCTACAAAAC+AGG + tig0030216:9188-9207 None:intergenic 50.0%
! CTGTTTTGTAGCTGGACTGC+TGG - tig0030216:9186-9205 Msa1442870:intron 50.0%
GTGATCCAGCGTGTTTGTTC+TGG - tig0030216:9488-9507 Msa1442870:intron 50.0%
AGGTGGAGCAACTGAGATAG+GGG + tig0030216:9537-9556 None:intergenic 50.0%
GAGGTGGAGCAACTGAGATA+GGG + tig0030216:9538-9557 None:intergenic 50.0%
TGAGGTGGAGCAACTGAGAT+AGG + tig0030216:9539-9558 None:intergenic 50.0%
ACTTGAGTGAGGTTGTGAGG+TGG + tig0030216:9554-9573 None:intergenic 50.0%
CGGACACAAATTCGAGCTGA+AGG + tig0030216:9635-9654 None:intergenic 50.0%
AACCGACACAAGTAGGACAC+CGG + tig0030216:9655-9674 None:intergenic 50.0%
CCCACTCCTACAACAATCGA+AGG + tig0030216:10146-10165 None:intergenic 50.0%
CTTTACAAGGTATGGGAGGG+AGG + tig0030216:10486-10505 None:intergenic 50.0%
CTCCCTCCCATACCTTGTAA+AGG - tig0030216:10484-10503 Msa1442870:CDS 50.0%
GCACCTTTACAAGGTATGGG+AGG + tig0030216:10490-10509 None:intergenic 50.0%
TGGCAATTGGACTGCAGGTA+AGG - tig0030216:11388-11407 Msa1442870:CDS 50.0%
GGCAATTGGACTGCAGGTAA+GGG - tig0030216:11389-11408 Msa1442870:CDS 50.0%
ACTCTATGCTCTGCGCTTTC+TGG - tig0030216:11470-11489 Msa1442870:CDS 50.0%
TGTAGGAATGGAAGGGGAAG+GGG + tig0030216:11808-11827 None:intergenic 50.0%
CTGTAGGAATGGAAGGGGAA+GGG + tig0030216:11809-11828 None:intergenic 50.0%
ACTGTAGGAATGGAAGGGGA+AGG + tig0030216:11810-11829 None:intergenic 50.0%
!! CTCAGGTTGACCAACTTGTC+GGG - tig0030216:12072-12091 Msa1442870:CDS 50.0%
TCGGCTCTCATAATAGCACC+AGG + tig0030216:12138-12157 None:intergenic 50.0%
! CGAATTCTTGGTGCACACCA+TGG - tig0030216:12155-12174 Msa1442870:CDS 50.0%
CATATGTTGAGAGCAGGCCA+TGG + tig0030216:12175-12194 None:intergenic 50.0%
TGCTAGTAGCAGTAGTTCGG+TGG + tig0030216:12336-12355 None:intergenic 50.0%
ACCGAACTACTGCTACTAGC+AGG - tig0030216:12335-12354 Msa1442870:CDS 50.0%
!! CGACAAGCAGGTTGGTATCA+AGG + tig0030216:12535-12554 None:intergenic 50.0%
TTTCTCTGCGACAAGCAGGT+TGG + tig0030216:12543-12562 None:intergenic 50.0%
CTGATTTCTCTGCGACAAGC+AGG + tig0030216:12547-12566 None:intergenic 50.0%
GCCTGCAGGACAAAGGTAAA+AGG + tig0030216:12892-12911 None:intergenic 50.0%
CTTCCAGGACAAAGAATGGG+TGG - tig0030216:12975-12994 Msa1442870:intron 50.0%
! AAGAATGGGTGGAGCACTTG+AGG - tig0030216:12986-13005 Msa1442870:intron 50.0%
TCTGAAGAGCCTGTCCTTGT+TGG - tig0030216:13095-13114 Msa1442870:intron 50.0%
TCACAGTCTCCAACAAGGAC+AGG + tig0030216:13107-13126 None:intergenic 50.0%
GTTGGCTGTGGAGGAACATT+CGG + tig0030216:13338-13357 None:intergenic 50.0%
GTTCCTCCACAGCCAACTTA+TGG - tig0030216:13341-13360 Msa1442870:intron 50.0%
! TCAAGGCCATAAGTTGGCTG+TGG + tig0030216:13350-13369 None:intergenic 50.0%
TCATTCATGTCAGTCTCGGG+AGG + tig0030216:13653-13672 None:intergenic 50.0%
GATCGGAAAAAGGATTCCGG+TGG - tig0030216:13911-13930 Msa1442870:intron 50.0%
TCCGGTGGTTCATCCTCTAA+AGG - tig0030216:13926-13945 Msa1442870:intron 50.0%
! GCCTTTAGAGGATGAACCAC+CGG + tig0030216:13930-13949 None:intergenic 50.0%
TGGTGTAGTAGCGCCTTTAG+AGG + tig0030216:13942-13961 None:intergenic 50.0%
!! AATGCCCGACTTGGAACAAC+TGG + tig0030216:13962-13981 None:intergenic 50.0%
! GCAAGGGGTATGGAGTCTAA+AGG + tig0030216:14263-14282 None:intergenic 50.0%
AAAGAGGAGAGCAAGGGGTA+TGG + tig0030216:14273-14292 None:intergenic 50.0%
CCTACAGAAAGAGGAGAGCA+AGG + tig0030216:14280-14299 None:intergenic 50.0%
CCTTGCTCTCCTCTTTCTGT+AGG - tig0030216:14277-14296 Msa1442870:intron 50.0%
GAAACAAACCCCATCTGAGG+AGG + tig0030216:14815-14834 None:intergenic 50.0%
TATCCTTGCAGCTGATGCAC+TGG - tig0030216:15543-15562 Msa1442870:intron 50.0%
ATACCAGTGCATCAGCTGCA+AGG + tig0030216:15549-15568 None:intergenic 50.0%
! GCTGATGCACTGGTATCAAC+TGG - tig0030216:15553-15572 Msa1442870:intron 50.0%
! TGCACTGGTATCAACTGGGT+TGG - tig0030216:15558-15577 Msa1442870:intron 50.0%
!! ATCAACTGGGTTGGCCAAGT+TGG - tig0030216:15567-15586 Msa1442870:intron 50.0%
!! TCAACTGGGTTGGCCAAGTT+GGG - tig0030216:15568-15587 Msa1442870:intron 50.0%
! TTTGGAAGTGTAGGGTGACC+TGG - tig0030216:16180-16199 Msa1442870:five_prime_UTR 50.0%
ATGTCTTACGATCAGGGACC+AGG + tig0030216:16201-16220 None:intergenic 50.0%
! GCACTTGCCGATTATGTCCA+TGG - tig0030216:16238-16257 Msa1442870:five_prime_UTR 50.0%
! TGCCGATTATGTCCATGGGA+AGG - tig0030216:16243-16262 Msa1442870:five_prime_UTR 50.0%
! AAAGCATCATGGGCAGCACT+CGG - tig0030216:16312-16331 Msa1442870:five_prime_UTR 50.0%
CAATTCCGGGTTCGTGTGTC+GGG + tig0030216:8652-8671 None:intergenic 55.0%
CACACGAACCCGGAATTGTG+AGG - tig0030216:8654-8673 Msa1442870:intron 55.0%
AACGGTGGAATCGAGCGTCT+CGG + tig0030216:8697-8716 None:intergenic 55.0%
! ACCGTTCCCACTCGTTTTCG+CGG - tig0030216:8711-8730 Msa1442870:intron 55.0%
GAATCGCCGCGAAAACGAGT+GGG + tig0030216:8720-8739 None:intergenic 55.0%
! ACTCGTTTTCGCGGCGATTC+CGG - tig0030216:8720-8739 Msa1442870:intron 55.0%
TCGCCGGAATGGTAATCTGG+TGG + tig0030216:8752-8771 None:intergenic 55.0%
GTCCGGTGTCCTACTTGTGT+CGG - tig0030216:9650-9669 Msa1442870:intron 55.0%
TTATGGCTGAAGAGAGGGCC+CGG - tig0030216:9983-10002 Msa1442870:CDS 55.0%
TGGAGGTTACTATGGGGGAG+AGG - tig0030216:10086-10105 Msa1442870:intron 55.0%
TACAAGGTATGGGAGGGAGG+TGG + tig0030216:10483-10502 None:intergenic 55.0%
GGTAGGGAGGATAAGGCTTG+TGG + tig0030216:12429-12448 None:intergenic 55.0%
CTTTGTTGACACTGCGGCCT+AGG + tig0030216:12718-12737 None:intergenic 55.0%
CTAGGCCGCAGTGTCAACAA+AGG - tig0030216:12716-12735 Msa1442870:intron 55.0%
GTGACAAATGCGTCTGGGCT+TGG - tig0030216:12842-12861 Msa1442870:intron 55.0%
GCTCCACCCATTCTTTGTCC+TGG + tig0030216:12981-13000 None:intergenic 55.0%
! AGGCCATAAGTTGGCTGTGG+AGG + tig0030216:13347-13366 None:intergenic 55.0%
TTGGCATGGACCCTCTTGCA+CGG + tig0030216:13532-13551 None:intergenic 55.0%
! TGTTCCAAGTCGGGCATTGC+AGG - tig0030216:13964-13983 Msa1442870:intron 55.0%
TTTGCCTGCAATGCCCGACT+TGG + tig0030216:13971-13990 None:intergenic 55.0%
! AAGTCGGGCATTGCAGGCAA+AGG - tig0030216:13970-13989 Msa1442870:intron 55.0%
!! TTTGGCTCTCCCTCCTCAGA+TGG - tig0030216:14802-14821 Msa1442870:CDS 55.0%
! TTGGCTCTCCCTCCTCAGAT+GGG - tig0030216:14803-14822 Msa1442870:CDS 55.0%
CCAAGCTTGAGTCCTTCCCA+TGG + tig0030216:16258-16277 None:intergenic 55.0%
CCATGGGAAGGACTCAAGCT+TGG - tig0030216:16255-16274 Msa1442870:five_prime_UTR 55.0%
AAGCATCATGGGCAGCACTC+GGG - tig0030216:16313-16332 Msa1442870:five_prime_UTR 55.0%
GCGAAAACGAGTGGGAACGG+TGG + tig0030216:8712-8731 None:intergenic 60.0%
GCCGCGAAAACGAGTGGGAA+CGG + tig0030216:8715-8734 None:intergenic 60.0%
GGAATCGCCGCGAAAACGAG+TGG + tig0030216:8721-8740 None:intergenic 60.0%
GGTAATCTGGTGGAAGCGGC+CGG + tig0030216:8742-8761 None:intergenic 60.0%
CGTGATCCAACTCGCCGGAA+TGG + tig0030216:8763-8782 None:intergenic 60.0%
TATGGCTGAAGAGAGGGCCC+GGG - tig0030216:9984-10003 Msa1442870:CDS 60.0%
TATGGGAGGGAGGTGGTTGG+GGG + tig0030216:10476-10495 None:intergenic 60.0%
GTATGGGAGGGAGGTGGTTG+GGG + tig0030216:10477-10496 None:intergenic 60.0%
GGTATGGGAGGGAGGTGGTT+GGG + tig0030216:10478-10497 None:intergenic 60.0%
AGGTATGGGAGGGAGGTGGT+TGG + tig0030216:10479-10498 None:intergenic 60.0%
!! TGCTCTGCGCTTTCTGGAGC+AGG - tig0030216:11476-11495 Msa1442870:CDS 60.0%
ATCAGTGCGCGGTCCTCTAG+AGG - tig0030216:12238-12257 Msa1442870:intron 60.0%
GGCGAAGTCTCGGATGCCTT+TGG + tig0030216:12638-12657 None:intergenic 60.0%
TCTTGCACGGGCGTTCCAGT+AGG + tig0030216:13519-13538 None:intergenic 60.0%
TACTGGAACGCCCGTGCAAG+AGG - tig0030216:13518-13537 Msa1442870:intron 60.0%
ACTGGAACGCCCGTGCAAGA+GGG - tig0030216:13519-13538 Msa1442870:intron 60.0%
TGGCATGGACCCTCTTGCAC+GGG + tig0030216:13531-13550 None:intergenic 60.0%
GTGCAAGAGGGTCCATGCCA+AGG - tig0030216:13531-13550 Msa1442870:intron 60.0%
ACGGCTGGATCTCCTTGGCA+TGG + tig0030216:13546-13565 None:intergenic 60.0%
TTCGCACGGCTGGATCTCCT+TGG + tig0030216:13551-13570 None:intergenic 60.0%
TGGCTCTCCCTCCTCAGATG+GGG - tig0030216:14804-14823 Msa1442870:CDS 60.0%
GCAGCACTCGGGCTTGAATC+TGG - tig0030216:16324-16343 Msa1442870:five_prime_UTR 60.0%
GCCAACCCGACACACGAACC+CGG - tig0030216:8644-8663 Msa1442870:intron 65.0%
TCCGGGTTCGTGTGTCGGGT+TGG + tig0030216:8648-8667 None:intergenic 65.0%
GGGAGGTGGTTGGGGGCTTT+AGG + tig0030216:10469-10488 None:intergenic 65.0%
GGACTGGGCTGTGCAACGAG+CGG + tig0030216:13182-13201 None:intergenic 65.0%
!! CGTGTGTCGGGTTGGCGACC+CGG + tig0030216:8640-8659 None:intergenic 70.0%
GGGCTGTGCAACGAGCGGCA+TGG + tig0030216:13177-13196 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0030216 gene 8384 16363 8384 ID=Msa1442870;Name=Msa1442870
tig0030216 mRNA 8384 16363 8384 ID=Msa1442870-mRNA-1;Parent=Msa1442870;Name=Msa1442870-mRNA-1;_AED=0.30;_eAED=0.33;_QI=466|0.61|0.57|0.92|0.92|0.85|14|0|833
tig0030216 exon 8384 8554 8384 ID=Msa1442870-mRNA-1:exon:13578;Parent=Msa1442870-mRNA-1
tig0030216 exon 9138 9193 9138 ID=Msa1442870-mRNA-1:exon:13577;Parent=Msa1442870-mRNA-1
tig0030216 exon 9755 9813 9755 ID=Msa1442870-mRNA-1:exon:13576;Parent=Msa1442870-mRNA-1
tig0030216 exon 9922 10049 9922 ID=Msa1442870-mRNA-1:exon:13575;Parent=Msa1442870-mRNA-1
tig0030216 exon 10453 10577 10453 ID=Msa1442870-mRNA-1:exon:13574;Parent=Msa1442870-mRNA-1
tig0030216 exon 10725 11241 10725 ID=Msa1442870-mRNA-1:exon:13573;Parent=Msa1442870-mRNA-1
tig0030216 exon 11332 11837 11332 ID=Msa1442870-mRNA-1:exon:13572;Parent=Msa1442870-mRNA-1
tig0030216 exon 12010 12189 12010 ID=Msa1442870-mRNA-1:exon:13571;Parent=Msa1442870-mRNA-1
tig0030216 exon 12288 12390 12288 ID=Msa1442870-mRNA-1:exon:13570;Parent=Msa1442870-mRNA-1
tig0030216 exon 12488 12670 12488 ID=Msa1442870-mRNA-1:exon:13569;Parent=Msa1442870-mRNA-1
tig0030216 exon 13250 13342 13250 ID=Msa1442870-mRNA-1:exon:13568;Parent=Msa1442870-mRNA-1
tig0030216 exon 13741 13917 13741 ID=Msa1442870-mRNA-1:exon:13567;Parent=Msa1442870-mRNA-1
tig0030216 exon 14640 14870 14640 ID=Msa1442870-mRNA-1:exon:13566;Parent=Msa1442870-mRNA-1
tig0030216 exon 15925 16363 15925 ID=Msa1442870-mRNA-1:exon:13565;Parent=Msa1442870-mRNA-1
tig0030216 five_prime_UTR 15925 16363 15925 ID=Msa1442870-mRNA-1:five_prime_utr;Parent=Msa1442870-mRNA-1
tig0030216 five_prime_UTR 14844 14870 14844 ID=Msa1442870-mRNA-1:five_prime_utr;Parent=Msa1442870-mRNA-1
tig0030216 CDS 14640 14843 14640 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 13741 13917 13741 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 13250 13342 13250 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 12488 12670 12488 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 12288 12390 12288 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 12010 12189 12010 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 11332 11837 11332 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 10725 11241 10725 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 10453 10577 10453 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 9922 10049 9922 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 9755 9813 9755 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 9138 9193 9138 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
tig0030216 CDS 8384 8554 8384 ID=Msa1442870-mRNA-1:cds;Parent=Msa1442870-mRNA-1
Gene Sequence

>Msa1442870

ATGGGTACTATACAACAAAATGTGTTACCATACTCCTTGCTTAACCAACAGCTGTTCTCAATGGATGAGGAGCTTTGGTTTATGGCTGAAGAGAGGGCCCGGGAAGTACTATGCACAATTCAACCAAATGTTGTTTCTGAGGCGAACAGAAAGAGGATTATTGATTTTGTTCAGAGGCTGATTGGAGGTTACTATGGGGGAGAGGTATTCGTGTTTGGATCAGTCCCACTAAAAACCTATCTTCCAGATGGAGATATTGACTTGACAGTTCTCAGTCATGAAAGTGTTGAAGATGATTTGGTACAAGCTGTATGCAATCTACTTGAAAGTGGAGAGGACCATGAGTACCAAGTAAAAGACATACAACAAATACGTGCGCAGGTAAGGGTTGTCAAATGCACAGTGAAAAATATTGCAGTTGACATCTCCTTTAATCAGATGGCTGGACTCTATGCTCTGCGCTTTCTGGAGCAGGTTGACCAACTTGTCGGGAAAAACCATGTCTTCAAACAAAGTATAATCTTAGTCAAAGCCTGGTGCTATTATGAGAGCCGAATTCTTGGTGCACACCATGGCCTGCTCTCAACATATGCAGTTGAAATATTGGTTTTATATATTATCAACTGTTTTCATTCATCAGTGCGCGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGACTGGGAGAAGAATTATGTCACCATATATGGTCCACAAGCCTTATCCTCCCTACCAGAAATTGTTGAGAAATCAGAATGCGATGGAGGTGAGTTCTTGCTCAGTAAAGAGCTTCTGAAAAATTACAGGGATATGTGCTTTGTTCCAAAGGCATCCGAGACTTCGCCTCGTGAATTTTCCATCAAGTACATTAACATCTTGGATCCTCTAAAAAATGACAACAACCTAGGCCGCAGTGTCAACAAAGGCAATTTACATCGAATTGGATTCGCTCTTAGGTTTGGTGCTCGAAAGCTTAAGGAGATCCTTAAGCTTCCAGGACAAAGAATGGGTGGAGCACTTGAGGTGTTTTTCATGAACACCTTGAATAGAAATGGGAAAGGACAAAGGCCTGATATTGATGTTCCTATTCCTGCATTTGGTACTGGAAAATCTGAAGAGCCTGTCCTTGTTGGAGACTGTGACAGTTACTATGGCGGCTTAAAATACGTTCAGTTGTATCGTAACTATGCCATGCCGCTCGTTGCACAGCCCAGTCCCTCATCACCACAATTTGATGCTGATATGCTTGCACCGCAATTTGATGCTGATATGCTTGCACCACAACAAAACTGGTATATGTATTATCATAGAGGTGCTGATTTATATGTGCCGAGTCAGACTTTCTTTCATCCGAATGTTCCTCCACAGCCAACTTATGGCCTTGAAGAAATAGGGAAATCGCGAGGAACAGGGACTTACATACCTGACATGACTCTTACTACCTACTGGAACGCCCGTGCAAGAGGGTCCATGCCAAGGAGATCCAGCCGTGCGAATAATAATAATAATAACAACAACAACAACAACAATAATAATAATAATGCTTCATCCAAGAGAAAACAAATAGAAGAGGTTCCTCCCGAGACTGACATGAATGATGAGAATTCCAAGTCCTTTGAGCTCTCAAAGGAAGATTTTCCTGTTCTTTCAAGCATTGGCAACAGCAGTTTGTCAGCATCTCATCAATCTGAGCAGGACCAGAATTCTTCATCGCCTCAAATATATATCGAGTTCGGAACTTACAGTGTCTCAAAATCCCTGAAAGAACTGAGTTTGGGAACAAAGGATCAGAAAAAGGATTCTTGTGTTTCATCCTCTAAGACATTGGGAACAAAGGATCGGAAAAAGGATTCCGGTGGTTCATCCTCTAAAGGCGCTACTACACCAGTTGTTCCAAGTCGGGCATTGCAGGCAAAGGAGAAGTGTACTCGGATGGAGAAGAAGATGGATTTAGGGAGAAACTATAATCGGTTGCTACTGATTGATATAGACTTTGTGGGATTAAGTCTTGGTAAGGATGTTTACAAGTTTTGTTCTGCCTTTAGACTCCATACCCCTTGCTCTCCTCTTTCTCAAGAGTTGTACAACCTCTCTTGCAAAATTACGGAAAATCCATTTTCAGATCAAATATCACTCTATGATACTTCAAACTATGGCGTTTTTCAGCTTAGTAATGGTTTGGCTCTCCCTCCTCAGATGGGATGGAACAGCTGGAACTTCTTTGCATGCAATATCAATGAAACAGTTATTAAGGAAACAGCTGATGCACTGGTATCAACTGGGTTGGCCAAGTTGGGTTATGTGTACGTCAATATAGGTGACCTGGTCCCTGATCGTAAGACATTTCCATCAGGAATCAAAGCACTTGCCGATTATGTCCATGGGAAGGACTCAAGCTTGGCATATATTCTGATGCTGGGTAGACTACTTTCACAAAAGCATCATGGGCAGCACTCGGGCTTGAATCTGGAATTCATGTTTCCGTAA
Protein sequence

>Msa1442870

MGTIQQNVLPYSLLNQQLFSMDEELWFMAEERAREVLCTIQPNVVSEANRKRIIDFVQRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLSHESVEDDLVQAVCNLLESGEDHEYQVKDIQQIRAQVRVVKCTVKNIAVDISFNQMAGLYALRFLEQVDQLVGKNHVFKQSIILVKAWCYYESRILGAHHGLLSTYAVEILVLYIINCFHSSVRGPLEVLYRFLDYYSTFDWEKNYVTIYGPQALSSLPEIVEKSECDGGEFLLSKELLKNYRDMCFVPKASETSPREFSIKYINILDPLKNDNNLGRSVNKGNLHRIGFALRFGARKLKEILKLPGQRMGGALEVFFMNTLNRNGKGQRPDIDVPIPAFGTGKSEEPVLVGDCDSYYGGLKYVQLYRNYAMPLVAQPSPSSPQFDADMLAPQFDADMLAPQQNWYMYYHRGADLYVPSQTFFHPNVPPQPTYGLEEIGKSRGTGTYIPDMTLTTYWNARARGSMPRRSSRANNNNNNNNNNNNNNNNASSKRKQIEEVPPETDMNDENSKSFELSKEDFPVLSSIGNSSLSASHQSEQDQNSSSPQIYIEFGTYSVSKSLKELSLGTKDQKKDSCVSSSKTLGTKDRKKDSGGSSSKGATTPVVPSRALQAKEKCTRMEKKMDLGRNYNRLLLIDIDFVGLSLGKDVYKFCSAFRLHTPCSPLSQELYNLSCKITENPFSDQISLYDTSNYGVFQLSNGLALPPQMGWNSWNFFACNINETVIKETADALVSTGLAKLGYVYVNIGDLVPDRKTFPSGIKALADYVHGKDSSLAYILMLGRLLSQKHHGQHSGLNLEFMFP*