AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1447010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1447010 MtrunA17_Chr4g0027671 96.360 467 13 1 1 467 81 543 0.0 932
Msa1447010 MtrunA17_Chr2g0320631 74.573 468 106 5 1 466 82 538 0.0 667
Msa1447010 MtrunA17_Chr1g0179611 65.217 460 150 3 1 460 86 535 0.0 625
Msa1447010 MtrunA17_Chr5g0407121 47.772 404 142 6 1 403 80 415 6.27e-128 378
Msa1447010 MtrunA17_Chr8g0370321 45.011 451 155 8 1 450 80 438 8.10e-126 373
Msa1447010 MtrunA17_Chr3g0139371 30.899 178 92 3 239 402 238 398 2.79e-22 98.6
Msa1447010 MtrunA17_Chr3g0139371 37.000 100 57 3 1 100 116 209 1.44e-11 66.2
Msa1447010 MtrunA17_Chr6g0480541 31.792 173 98 5 237 403 1043 1201 1.35e-20 95.5
Msa1447010 MtrunA17_Chr5g0437131 30.387 181 104 6 237 409 546 712 1.12e-19 92.0
Msa1447010 MtrunA17_Chr8g0369241 31.163 215 95 5 237 408 283 487 1.10e-17 86.3
Msa1447010 MtrunA17_Chr8g0369241 39.175 97 53 3 3 98 183 274 2.31e-13 72.8
Msa1447010 MtrunA17_Chr3g0116701 30.058 173 100 3 239 402 259 419 2.97e-17 83.6
Msa1447010 MtrunA17_Chr3g0116701 38.000 100 56 3 1 100 136 229 6.17e-13 70.5
Msa1447010 MtrunA17_Chr1g0210061 34.254 181 94 6 239 404 757 927 1.90e-16 82.4
Msa1447010 MtrunA17_Chr1g0210061 36.364 99 57 3 1 98 656 749 4.71e-11 65.5
Msa1447010 MtrunA17_Chr4g0058241 29.412 170 99 3 239 399 263 420 1.96e-15 78.2
Msa1447010 MtrunA17_Chr4g0058241 38.000 100 56 3 1 100 140 233 7.04e-13 70.5
Msa1447010 MtrunA17_Chr3g0123491 25.967 181 101 4 239 404 260 422 5.78e-15 76.6
Msa1447010 MtrunA17_Chr3g0123491 33.000 100 61 3 1 100 135 228 7.14e-11 63.9
Msa1447010 MtrunA17_Chr4g0045841 31.068 206 104 10 202 404 172 342 2.85e-13 71.2
Msa1447010 MtrunA17_Chr8g0387401 30.622 209 102 9 202 404 169 340 1.75e-12 68.9
Msa1447010 MtrunA17_Chr2g0287271 32.143 224 116 12 228 441 155 352 4.25e-12 68.2
Msa1447010 MtrunA17_Chr8g0377071 31.609 174 100 5 237 406 522 680 4.50e-12 68.6
Msa1447010 MtrunA17_Chr4g0030231 30.583 206 106 8 202 404 157 328 5.02e-12 67.4
Msa1447010 MtrunA17_Chr4g0065851 32.287 223 117 11 228 441 155 352 5.68e-12 67.8
Msa1447010 MtrunA17_Chr8g0348481 29.756 205 107 8 202 403 154 324 6.41e-12 67.0
Msa1447010 MtrunA17_Chr8g0392811 30.045 223 122 10 228 441 247 444 1.62e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1447010 AT3G53030.1 64.488 459 123 7 1 451 84 510 0.0 578
Msa1447010 AT3G44850.1 66.447 456 139 5 1 453 87 531 0.0 574
Msa1447010 AT5G22840.1 63.377 456 142 7 1 453 87 520 0.0 556
Msa1447010 AT4G35500.1 46.588 425 146 7 1 422 80 426 4.92e-127 376
Msa1447010 AT4G35500.2 46.588 425 146 7 1 422 81 427 2.10e-126 374
Msa1447010 AT2G17530.1 59.659 176 67 1 228 403 245 416 1.48e-73 238
Msa1447010 AT2G17530.1 55.970 134 57 1 1 132 80 213 2.67e-44 161
Msa1447010 AT2G17530.3 59.659 176 67 1 228 403 245 416 1.48e-73 238
Msa1447010 AT2G17530.3 55.970 134 57 1 1 132 80 213 2.67e-44 161
Msa1447010 AT2G17530.2 55.970 134 57 1 1 132 80 213 2.46e-45 162
Msa1447010 AT2G17530.2 61.765 102 35 1 228 329 245 342 7.39e-37 139
Msa1447010 AT1G73450.1 31.818 176 94 5 237 403 986 1144 8.68e-22 99.4
Msa1447010 AT1G73460.2 32.370 173 97 5 237 403 1003 1161 9.29e-22 99.4
Msa1447010 AT1G73460.1 32.370 173 97 5 237 403 1003 1161 9.29e-22 99.4
Msa1447010 AT2G40120.1 33.333 171 100 5 238 405 407 566 2.77e-21 97.4
Msa1447010 AT3G17750.1 30.814 172 101 4 237 403 972 1130 1.44e-19 92.8
Msa1447010 AT4G24740.10 29.944 177 97 5 239 403 57 218 5.21e-19 86.3
Msa1447010 AT4G24740.8 29.944 177 97 5 239 403 57 218 5.21e-19 86.3
Msa1447010 AT3G53570.1 30.168 179 97 5 238 403 281 444 5.49e-19 89.7
Msa1447010 AT3G53570.1 37.000 100 57 3 1 100 157 250 1.54e-12 69.7
Msa1447010 AT3G53570.4 30.168 179 97 5 238 403 281 444 5.49e-19 89.7
Msa1447010 AT3G53570.4 37.000 100 57 3 1 100 157 250 1.54e-12 69.7
Msa1447010 AT3G53570.2 30.168 179 97 5 238 403 281 444 5.49e-19 89.7
Msa1447010 AT3G53570.2 37.000 100 57 3 1 100 157 250 1.54e-12 69.7
Msa1447010 AT3G53570.3 29.348 184 92 5 238 403 267 430 6.18e-19 89.4
Msa1447010 AT3G53570.3 37.000 100 57 3 1 100 143 236 1.97e-12 69.3
Msa1447010 AT3G53570.5 29.348 184 92 5 238 403 267 430 6.18e-19 89.4
Msa1447010 AT3G53570.5 37.000 100 57 3 1 100 143 236 1.97e-12 69.3
Msa1447010 AT4G32660.4 32.386 176 97 5 239 404 123 286 7.40e-19 87.0
Msa1447010 AT4G32660.4 37.000 100 57 3 1 100 1 94 8.00e-13 69.3
Msa1447010 AT4G32660.3 32.386 176 97 5 239 404 227 390 1.44e-18 87.8
Msa1447010 AT4G32660.3 37.000 100 57 3 1 100 105 198 8.83e-13 70.1
Msa1447010 AT4G32660.1 32.386 176 97 5 239 404 235 398 1.48e-18 87.8
Msa1447010 AT4G32660.1 37.000 100 57 3 1 100 113 206 8.68e-13 70.5
Msa1447010 AT5G35980.2 31.963 219 89 6 237 408 265 470 2.24e-18 88.6
Msa1447010 AT5G35980.2 40.000 105 57 3 3 106 166 265 2.23e-15 79.3
Msa1447010 AT5G35980.1 31.963 219 89 6 237 408 265 470 2.35e-18 89.0
Msa1447010 AT5G35980.1 40.000 105 57 3 3 106 166 265 1.40e-15 80.1
Msa1447010 AT5G35980.3 31.963 219 89 6 237 408 230 435 3.23e-18 88.2
Msa1447010 AT5G35980.3 40.000 105 57 3 3 106 131 230 1.55e-15 80.1
Msa1447010 AT4G24740.6 29.944 177 97 5 239 403 160 321 4.66e-18 85.5
Msa1447010 AT4G24740.6 37.391 115 65 4 1 115 37 144 2.63e-14 74.3
Msa1447010 AT4G24740.9 29.944 177 97 5 239 403 160 321 4.66e-18 85.5
Msa1447010 AT4G24740.9 37.391 115 65 4 1 115 37 144 2.63e-14 74.3
Msa1447010 AT4G24740.2 29.944 177 97 5 239 403 160 321 4.66e-18 85.5
Msa1447010 AT4G24740.2 37.391 115 65 4 1 115 37 144 2.63e-14 74.3
Msa1447010 AT4G24740.7 29.944 177 97 5 239 403 225 386 6.95e-18 85.9
Msa1447010 AT4G24740.7 37.391 115 65 4 1 115 102 209 2.96e-14 74.7
Msa1447010 AT4G24740.1 29.944 177 97 5 239 403 263 424 8.61e-18 85.9
Msa1447010 AT4G24740.1 37.391 115 65 4 1 115 140 247 3.26e-14 74.7
Msa1447010 AT3G25840.1 33.333 189 85 8 239 404 764 934 5.44e-17 84.3
Msa1447010 AT3G25840.2 33.333 189 85 8 239 404 502 672 7.04e-17 84.0
Msa1447010 AT3G53640.1 31.148 183 98 6 239 404 470 641 3.35e-16 81.6
Msa1447010 AT1G13350.1 30.220 182 101 5 239 404 589 760 1.21e-15 80.1
Msa1447010 AT1G13350.2 30.220 182 101 5 239 404 616 787 1.94e-15 79.7
Msa1447010 AT1G13350.3 30.220 182 101 5 239 404 662 833 2.32e-15 79.3
Msa1447010 AT4G24740.5 38.462 91 46 1 239 329 160 240 1.18e-14 73.9
Msa1447010 AT4G24740.5 37.391 115 65 4 1 115 37 144 1.37e-14 73.9
Msa1447010 AT4G32660.2 39.048 105 53 3 239 342 235 329 1.44e-14 75.5
Msa1447010 AT4G32660.2 37.000 100 57 3 1 100 113 206 7.83e-13 70.1
Msa1447010 AT4G24740.4 37.391 115 65 4 1 115 140 247 1.90e-14 74.7
Msa1447010 AT4G24740.3 37.391 115 65 4 1 115 140 247 2.46e-14 74.7
Msa1447010 AT4G24740.3 38.462 91 46 1 239 329 263 343 2.98e-14 74.3
Msa1447010 AT5G19010.1 32.407 216 113 10 228 434 155 346 3.16e-13 72.4
Msa1447010 AT3G59790.1 29.384 211 101 10 202 404 177 347 6.14e-13 70.9
Msa1447010 AT3G14720.1 30.556 216 117 8 228 434 155 346 1.87e-12 69.7
Msa1447010 AT4G11330.1 27.519 258 139 11 202 454 160 374 5.11e-12 67.8
Msa1447010 AT3G14720.2 31.019 216 116 8 228 434 155 346 5.38e-12 67.8
Msa1447010 AT3G14720.3 31.019 216 116 8 228 434 155 346 5.38e-12 67.8
Msa1447010 AT1G01560.2 29.268 205 108 9 202 403 157 327 6.93e-12 67.4
Msa1447010 AT4G01370.1 29.756 205 107 9 202 403 160 330 1.76e-11 66.2
Msa1447010 AT2G01450.3 31.222 221 117 11 228 438 146 341 2.62e-11 65.9
Msa1447010 AT2G01450.1 31.222 221 117 11 228 438 146 341 2.62e-11 65.9
Msa1447010 AT2G01450.2 31.222 221 117 11 228 438 146 341 2.62e-11 65.9
Msa1447010 AT2G01450.4 31.222 221 117 11 228 438 146 341 2.62e-11 65.9
Msa1447010 AT3G45640.1 29.808 208 103 9 202 403 155 325 2.96e-11 65.5

Find 107 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCCAAAACAGTAAAAT+TGG 0.157415 tig0031566:+1286 Msa1447010:CDS
TTGGATCACTTCAAGCATTC+AGG 0.225873 tig0031566:+971 Msa1447010:CDS
AACTTTACTCGAAGAGCTAT+TGG 0.245290 tig0031566:-1482 None:intergenic
CATCTATGTTGATGACTTTA+CGG 0.264587 tig0031566:-3781 None:intergenic
AAGTGCAAGCTGGTTGATTT+TGG 0.274103 tig0031566:+1607 Msa1447010:CDS
TTCTTATGACCATCGTTTCC+TGG 0.324044 tig0031566:-1538 None:intergenic
AGGTGTCCTGAGGTTCTTCT+TGG 0.337399 tig0031566:+1685 Msa1447010:CDS
AAGGAAAGTCCAGAGGAATC+TGG 0.359071 tig0031566:+1385 Msa1447010:CDS
GTGAGGAATATATCTATTAA+TGG 0.359774 tig0031566:+3729 Msa1447010:CDS
ACATCCATGAGTTGCGATTC+TGG 0.361691 tig0031566:+3439 Msa1447010:CDS
AAAATGTGTTGTGAAGCTTT+TGG 0.362109 tig0031566:+952 Msa1447010:CDS
ATCTATGTTGATGACTTTAC+GGG 0.386093 tig0031566:-3780 None:intergenic
GATTTCCTTGGATCCTTTGA+CGG 0.395707 tig0031566:-1208 None:intergenic
ACTTTACTCGAAGAGCTATT+GGG 0.402890 tig0031566:-1481 None:intergenic
GCATTGATGATGGAACTTCT+TGG 0.403191 tig0031566:+3093 Msa1447010:CDS
TGGATCACTTCAAGCATTCA+GGG 0.408279 tig0031566:+972 Msa1447010:CDS
ATATTCAAACAAGGCAATAT+AGG 0.414165 tig0031566:+1665 Msa1447010:CDS
ACAGTGGTGACAACTATGAT+AGG 0.429417 tig0031566:+1794 Msa1447010:CDS
GATAGTCACTATATTTGATA+AGG 0.433753 tig0031566:-1051 None:intergenic
GGACAAGGAAAAGGCCGAGC+AGG 0.434320 tig0031566:+3689 Msa1447010:CDS
ATCTGCTTTGAGCTTGCCAC+TGG 0.441460 tig0031566:+1751 Msa1447010:CDS
TTGGTGTTTGGAAGGATAAG+TGG 0.442157 tig0031566:-1238 None:intergenic
TTCAAGCATTCAGGGCCTAA+TGG 0.442522 tig0031566:+980 Msa1447010:CDS
TTCTTCTCCTGGTTCTTCGT+CGG 0.444681 tig0031566:-1319 None:intergenic
TTGTTACAATTATCCTGCTC+AGG 0.444711 tig0031566:-1424 None:intergenic
AGGAAAGTCCAGAGGAATCT+GGG 0.452844 tig0031566:+1386 Msa1447010:CDS
TCAAAGGATCCAAGGAAATC+AGG 0.454737 tig0031566:+1211 Msa1447010:CDS
AAATGAAGGGAAAGGGTAAG+AGG 0.459156 tig0031566:+1341 Msa1447010:CDS
GAATGCTCATTGATTGCATC+AGG 0.462979 tig0031566:-3648 None:intergenic
TAATGGCGTGCATGTGTGTA+TGG 0.464665 tig0031566:+997 Msa1447010:CDS
CAATCATCCCCAGATTCCTC+TGG 0.469706 tig0031566:-1394 None:intergenic
GAATGAAGTAACACATTCTC+AGG 0.471207 tig0031566:-1175 None:intergenic
TGCCAGCAGCTTCTTTCTCA+TGG 0.472338 tig0031566:-1572 None:intergenic
TTATCCAAAACAGTAAAATT+GGG 0.472361 tig0031566:+1287 Msa1447010:CDS
GATAACTTTCCTACCTTGCT+AGG 0.473221 tig0031566:-3123 None:intergenic
TGTTGATGACTTTACGGGTC+GGG 0.473456 tig0031566:-3775 None:intergenic
TCAGGGTCAAAATCAAGTAT+TGG 0.476440 tig0031566:-3537 None:intergenic
AGTGGAGCACCTGATTTCCT+TGG 0.486223 tig0031566:-1220 None:intergenic
ATAGTCACTATATTTGATAA+GGG 0.487347 tig0031566:-1050 None:intergenic
TTCCTGCAGATTGCACTTGG+TGG 0.488149 tig0031566:+3372 Msa1447010:intron
AATGAAGGGAAAGGGTAAGA+GGG 0.494221 tig0031566:+1342 Msa1447010:CDS
GGATCATCTGGCATTGATGA+TGG 0.496553 tig0031566:+3083 Msa1447010:intron
GAACCAGGAGAAGAAAATGA+AGG 0.498186 tig0031566:+1327 Msa1447010:CDS
GCAAAGGACCACATATCTGC+TGG 0.503873 tig0031566:-1724 None:intergenic
TGGAGATCCGACGAAGAACC+AGG 0.506120 tig0031566:+1312 Msa1447010:CDS
GAGAAGGAAGGACAAGGAAA+AGG 0.507421 tig0031566:+3680 Msa1447010:CDS
CTCAGTGCCTTACCCATCCA+TGG 0.510371 tig0031566:+3577 Msa1447010:CDS
TCGGCCAGAATCGCAACTCA+TGG 0.510515 tig0031566:-3443 None:intergenic
AGCATTCATTTGAAAAGAGA+AGG 0.511517 tig0031566:+3664 Msa1447010:CDS
CAAAACAGTAAAATTGGGAA+TGG 0.514220 tig0031566:+1292 Msa1447010:CDS
TATTTCCTGCAGATTGCACT+TGG 0.517054 tig0031566:+3369 Msa1447010:intron
CAAAATCAAGTATTGGAAGA+AGG 0.523920 tig0031566:-3530 None:intergenic
AAAGGCCGAGCAGGAGTTGG+TGG 0.524206 tig0031566:+3698 Msa1447010:CDS
ATCAACACAGACCACTGAAA+AGG 0.529361 tig0031566:+1507 Msa1447010:CDS
ACTGAAAAGGACCTTGCACC+AGG 0.530605 tig0031566:+1520 Msa1447010:CDS
GGCTCAAGGCTGTGTTGAGA+AGG 0.533237 tig0031566:+1366 Msa1447010:CDS
GAGCAGGAGTTGGTGGAAGT+TGG 0.533978 tig0031566:+3705 Msa1447010:CDS
CACTTATCCATGGATGGGTA+AGG 0.534938 tig0031566:-3584 None:intergenic
GACCATCGTTTCCTGGTGCA+AGG 0.537763 tig0031566:-1531 None:intergenic
GGAAAAGGCCGAGCAGGAGT+TGG 0.538465 tig0031566:+3695 Msa1447010:CDS
GACCTGCACTTATCCATGGA+TGG 0.540258 tig0031566:-3590 None:intergenic
TGATTGTAAAGAACCTGAGC+AGG 0.542237 tig0031566:+1411 Msa1447010:CDS
ACCCATCCATGGATAAGTGC+AGG 0.542820 tig0031566:+3588 Msa1447010:CDS
TTCACTGATTGATCCGTCAA+AGG 0.543734 tig0031566:+1195 Msa1447010:CDS
ATACACACATGCACGCCATT+AGG 0.544060 tig0031566:-995 None:intergenic
AAAACATATCTCTTTAACCA+TGG 0.544485 tig0031566:-1089 None:intergenic
GAGAAGAAAATGAAGGGAAA+GGG 0.549231 tig0031566:+1334 Msa1447010:CDS
AACCAGGAGAAGAAAATGAA+GGG 0.561030 tig0031566:+1328 Msa1447010:CDS
TTCATTTGAAAAGAGAAGGA+AGG 0.562994 tig0031566:+3668 Msa1447010:CDS
GCAGCTTCTTTCTCATGGAA+CGG 0.565762 tig0031566:-1567 None:intergenic
CGAGGACCTGCACTTATCCA+TGG 0.565971 tig0031566:-3594 None:intergenic
GGAGAAGAAAATGAAGGGAA+AGG 0.568087 tig0031566:+1333 Msa1447010:CDS
TTAGAACCAAGAAGAACCTC+AGG 0.569982 tig0031566:-1691 None:intergenic
TTCCATGAGAAAGAAGCTGC+TGG 0.571340 tig0031566:+1570 Msa1447010:CDS
ACCTGCACTTATCCATGGAT+GGG 0.571534 tig0031566:-3589 None:intergenic
ACTCAACTCCAGCAGATATG+TGG 0.578886 tig0031566:+1716 Msa1447010:CDS
TGTTGATCTTAAGTGCAAGC+TGG 0.579496 tig0031566:+1597 Msa1447010:CDS
AAGGGTAAGAGGGTGGCTCA+AGG 0.581871 tig0031566:+1352 Msa1447010:CDS
AGTGAGGGCTCAAGAGTTCG+AGG 0.586270 tig0031566:-3612 None:intergenic
ATTCTCAAACAAATTGAAGA+GGG 0.586563 tig0031566:+914 Msa1447010:CDS
TCGTGGAGTTCCTCTCTCCA+TGG 0.586905 tig0031566:+1072 Msa1447010:CDS
TCAATAGACATGGTGACTTG+AGG 0.591641 tig0031566:+3415 Msa1447010:CDS
CAGTGGTGACAACTATGATA+GGG 0.596335 tig0031566:+1795 Msa1447010:CDS
CTCAAAGCAGATGCAAGCAA+AGG 0.596681 tig0031566:-1740 None:intergenic
GATTCTCAAACAAATTGAAG+AGG 0.602574 tig0031566:+913 Msa1447010:CDS
TTGATCCGTCAAAGGATCCA+AGG 0.613694 tig0031566:+1203 Msa1447010:CDS
GTAAGGCACTGAGCAGCTGT+TGG 0.614457 tig0031566:-3567 None:intergenic
AACTTCCACCAACTCCTGCT+CGG 0.617085 tig0031566:-3703 None:intergenic
TCTTGGAAAGATGCCTAGCA+AGG 0.623101 tig0031566:+3110 Msa1447010:CDS
GACCTTGCACCAGGAAACGA+TGG 0.630623 tig0031566:+1529 Msa1447010:CDS
ATCAAATATAGTGACTATCG+TGG 0.632403 tig0031566:+1055 Msa1447010:CDS
ATGTTGATGACTTTACGGGT+CGG 0.635713 tig0031566:-3776 None:intergenic
TGACAACTATGATAGGGATG+AGG 0.636106 tig0031566:+1801 Msa1447010:CDS
ATCTCTTTAACCATGGAGAG+AGG 0.638691 tig0031566:-1082 None:intergenic
TGAAAAGAGAAGGAAGGACA+AGG 0.644229 tig0031566:+3674 Msa1447010:CDS
GAAGGGAAAGGGTAAGAGGG+TGG 0.647195 tig0031566:+1345 Msa1447010:CDS
AGGTTGTGTACTAGTCAGTG+AGG 0.667251 tig0031566:-3628 None:intergenic
GGTTGTGTACTAGTCAGTGA+GGG 0.667334 tig0031566:-3627 None:intergenic
GGAAAGTCCAGAGGAATCTG+GGG 0.668122 tig0031566:+1387 Msa1447010:CDS
GGGTGAGAAGATTATCACCA+AGG 0.668408 tig0031566:-1030 None:intergenic
GATAATGTCATTATTAGACA+CGG 0.679067 tig0031566:-1269 None:intergenic
TCACAAATGATATTCAAACA+AGG 0.699139 tig0031566:+1656 Msa1447010:CDS
TGAACAAGATGCAAATGACA+TGG 0.700027 tig0031566:+3500 Msa1447010:CDS
AGTTGGTGGAAGTTGGTGTG+AGG 0.701503 tig0031566:+3712 Msa1447010:CDS
TGTTGAGAAGGAAAGTCCAG+AGG 0.713136 tig0031566:+1378 Msa1447010:CDS
TCATAGTTGTCACCACTGTG+AGG 0.714384 tig0031566:-1790 None:intergenic
AAGGCAATATAGGTGTCCTG+AGG 0.731682 tig0031566:+1675 Msa1447010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAACTTTATATGATAT+GGG - tig0031566:2870-2889 None:intergenic 10.0%
!! AATATAAACTTTATATGATA+TGG - tig0031566:2871-2890 None:intergenic 10.0%
!! TTAAAAAAAACAAAACAATA+GGG + tig0031566:3289-3308 Msa1447010:intron 10.0%
!!! GAAACTTTTAATTAAGTTAA+AGG + tig0031566:2245-2264 Msa1447010:intron 15.0%
!! AAAAAGTAATTTACTAAAGT+CGG - tig0031566:2306-2325 None:intergenic 15.0%
!!! AATTACTTTTTGAAAGAAAA+AGG + tig0031566:2315-2334 Msa1447010:intron 15.0%
!! TATAATTTATAGTTTGACAA+TGG + tig0031566:2455-2474 Msa1447010:intron 15.0%
!! ATAATTTATAGTTTGACAAT+GGG + tig0031566:2456-2475 Msa1447010:intron 15.0%
!!! GAACATTTTGAATTAATAAT+TGG + tig0031566:2814-2833 Msa1447010:intron 15.0%
!!! ATTGTTTTGTTTTTTTTAAG+CGG - tig0031566:3288-3307 None:intergenic 15.0%
!! CTTAAAAAAAACAAAACAAT+AGG + tig0031566:3288-3307 Msa1447010:intron 15.0%
!! ATAGTCACTATATTTGATAA+GGG - tig0031566:1053-1072 None:intergenic 20.0%
!! ATTATCCAAAACAGTAAAAT+TGG + tig0031566:1286-1305 Msa1447010:CDS 20.0%
!! TTATCCAAAACAGTAAAATT+GGG + tig0031566:1287-1306 Msa1447010:CDS 20.0%
!! AATAACCAACCAAAAATTTA+AGG - tig0031566:1982-2001 None:intergenic 20.0%
!!! TACACCTTTTTTAATGATTT+TGG + tig0031566:2187-2206 Msa1447010:intron 20.0%
!!! ACACCTTTTTTAATGATTTT+GGG + tig0031566:2188-2207 Msa1447010:intron 20.0%
!!! ATCCTTTGTATTATTTTACT+AGG - tig0031566:2506-2525 None:intergenic 20.0%
!! AACAGAAAATAGTATGTTTA+GGG - tig0031566:2558-2577 None:intergenic 20.0%
!! AAACAGAAAATAGTATGTTT+AGG - tig0031566:2559-2578 None:intergenic 20.0%
!!! TATTTTATGTAAATCTTGAG+AGG - tig0031566:2898-2917 None:intergenic 20.0%
!! TAAATTAAAGAGATAGATAC+AGG + tig0031566:2962-2981 Msa1447010:intron 20.0%
!! AAAATTTGAAAAGAATGCAT+TGG + tig0031566:3017-3036 Msa1447010:intron 20.0%
!!! ATGATATCTATTTGTTTTAC+AGG + tig0031566:3062-3081 Msa1447010:intron 20.0%
! ATTCTCAAACAAATTGAAGA+GGG + tig0031566:914-933 Msa1447010:CDS 25.0%
! GATAGTCACTATATTTGATA+AGG - tig0031566:1054-1073 None:intergenic 25.0%
! AAAACATATCTCTTTAACCA+TGG - tig0031566:1092-1111 None:intergenic 25.0%
!! ATATGTTTTCATGTTCTAGT+GGG + tig0031566:1103-1122 Msa1447010:CDS 25.0%
! GATAATGTCATTATTAGACA+CGG - tig0031566:1272-1291 None:intergenic 25.0%
! TCACAAATGATATTCAAACA+AGG + tig0031566:1656-1675 Msa1447010:CDS 25.0%
! ATATTCAAACAAGGCAATAT+AGG + tig0031566:1665-1684 Msa1447010:CDS 25.0%
!! GTGCTATTATTATTTGATGT+TGG + tig0031566:1871-1890 Msa1447010:intron 25.0%
!! CTCTTTTGTCCTTAAATTTT+TGG + tig0031566:1970-1989 Msa1447010:intron 25.0%
!!! TTTGTCCTTAAATTTTTGGT+TGG + tig0031566:1974-1993 Msa1447010:intron 25.0%
!! ATGATTGTAAAAGCATGAAA+AGG - tig0031566:2023-2042 None:intergenic 25.0%
! TAAATCCAAAGTGAAGATAA+AGG + tig0031566:2214-2233 Msa1447010:intron 25.0%
! TTAATTAAGTTAAAGGTTCC+CGG + tig0031566:2252-2271 Msa1447010:intron 25.0%
! AAATATATGCAAAACTGTAC+CGG - tig0031566:2274-2293 None:intergenic 25.0%
! AAAAGGTAAATGCTATACTT+TGG + tig0031566:2332-2351 Msa1447010:intron 25.0%
! AATAATTATATGCCAAGAGA+AGG + tig0031566:2356-2375 Msa1447010:intron 25.0%
! ATAATACAAAGGATTTGTCT+AGG + tig0031566:2512-2531 Msa1447010:intron 25.0%
! ACAGAAAATAGTATGTTTAG+GGG - tig0031566:2557-2576 None:intergenic 25.0%
! GACAAGCATGATAATATTAT+TGG - tig0031566:2592-2611 None:intergenic 25.0%
! AACATAATTTGGCTAAAACA+TGG + tig0031566:2678-2697 Msa1447010:intron 25.0%
! TAAAGATATTCCACAAGAAT+GGG - tig0031566:2997-3016 None:intergenic 25.0%
! TTAAAGATATTCCACAAGAA+TGG - tig0031566:2998-3017 None:intergenic 25.0%
! ATGTCTATTGAAAAAATCTC+GGG - tig0031566:3406-3425 None:intergenic 25.0%
! CATGTCTATTGAAAAAATCT+CGG - tig0031566:3407-3426 None:intergenic 25.0%
!!! TCCATCAGAATCTTTTTTTT+CGG - tig0031566:3465-3484 None:intergenic 25.0%
! GTGAGGAATATATCTATTAA+TGG + tig0031566:3729-3748 Msa1447010:CDS 25.0%
GATTCTCAAACAAATTGAAG+AGG + tig0031566:913-932 Msa1447010:CDS 30.0%
!!! CAACACATTTTTTGTCATCA+GGG - tig0031566:943-962 None:intergenic 30.0%
!!! ACAACACATTTTTTGTCATC+AGG - tig0031566:944-963 None:intergenic 30.0%
! AAAATGTGTTGTGAAGCTTT+TGG + tig0031566:952-971 Msa1447010:CDS 30.0%
! TGTATGGTTTTTGAATTCCT+TGG + tig0031566:1013-1032 Msa1447010:CDS 30.0%
ATCAAATATAGTGACTATCG+TGG + tig0031566:1055-1074 Msa1447010:CDS 30.0%
! GATATGTTTTCATGTTCTAG+TGG + tig0031566:1102-1121 Msa1447010:CDS 30.0%
!!! ACTTATTTTTGGTGTTTGGA+AGG - tig0031566:1249-1268 None:intergenic 30.0%
!! ATTAGACACGGACTTATTTT+TGG - tig0031566:1260-1279 None:intergenic 30.0%
! CATTCCCAATTTTACTGTTT+TGG - tig0031566:1294-1313 None:intergenic 30.0%
CAAAACAGTAAAATTGGGAA+TGG + tig0031566:1292-1311 Msa1447010:CDS 30.0%
!!! TTGATTTTGGTAATGCTTGT+TGG + tig0031566:1620-1639 Msa1447010:CDS 30.0%
TAGTTTCTTAGTACGATACA+GGG - tig0031566:1834-1853 None:intergenic 30.0%
TTTGGACAGAAAATCGTTAA+AGG - tig0031566:2052-2071 None:intergenic 30.0%
!!! CCTTTTTTAATGATTTTGGG+CGG + tig0031566:2191-2210 Msa1447010:intron 30.0%
AATATATGCAAAACTGTACC+GGG - tig0031566:2273-2292 None:intergenic 30.0%
ACAATGGGAGATACTATTAT+GGG + tig0031566:2471-2490 Msa1447010:intron 30.0%
GGCCTAGTAAAATAATACAA+AGG + tig0031566:2501-2520 Msa1447010:intron 30.0%
CAGAAAATAGTATGTTTAGG+GGG - tig0031566:2556-2575 None:intergenic 30.0%
TGGAACTGGAAAACATAATT+TGG + tig0031566:2667-2686 Msa1447010:intron 30.0%
CAAATTCTTGTTGAAACAAC+AGG - tig0031566:2704-2723 None:intergenic 30.0%
TATGTTGAGTCAAAACTTCT+AGG - tig0031566:2944-2963 None:intergenic 30.0%
!!! ATTTGTTTTACAGGATCATC+TGG + tig0031566:3071-3090 Msa1447010:intron 30.0%
! CTGCATTTCATTCTGAAAAT+TGG + tig0031566:3321-3340 Msa1447010:intron 30.0%
!!! CGAGATTTTTTCAATAGACA+TGG + tig0031566:3405-3424 Msa1447010:CDS 30.0%
!! CAAAATCAAGTATTGGAAGA+AGG - tig0031566:3533-3552 None:intergenic 30.0%
AGCATTCATTTGAAAAGAGA+AGG + tig0031566:3664-3683 Msa1447010:CDS 30.0%
TTCATTTGAAAAGAGAAGGA+AGG + tig0031566:3668-3687 Msa1447010:CDS 30.0%
GAATGAAGTAACACATTCTC+AGG - tig0031566:1178-1197 None:intergenic 35.0%
!!! ACGGACTTATTTTTGGTGTT+TGG - tig0031566:1253-1272 None:intergenic 35.0%
AACCAGGAGAAGAAAATGAA+GGG + tig0031566:1328-1347 Msa1447010:CDS 35.0%
GAGAAGAAAATGAAGGGAAA+GGG + tig0031566:1334-1353 Msa1447010:CDS 35.0%
TTGTTACAATTATCCTGCTC+AGG - tig0031566:1427-1446 None:intergenic 35.0%
! GTTTTCAACAGATTCTACAC+TGG - tig0031566:1458-1477 None:intergenic 35.0%
ACTTTACTCGAAGAGCTATT+GGG - tig0031566:1484-1503 None:intergenic 35.0%
AACTTTACTCGAAGAGCTAT+TGG - tig0031566:1485-1504 None:intergenic 35.0%
ATCAAAAAGAACATCACCAG+TGG - tig0031566:1770-1789 None:intergenic 35.0%
AGTTTCTTAGTACGATACAG+GGG - tig0031566:1833-1852 None:intergenic 35.0%
GTAGTTTCTTAGTACGATAC+AGG - tig0031566:1835-1854 None:intergenic 35.0%
!!! CATGCACTTTTTTCACAGTT+TGG - tig0031566:2070-2089 None:intergenic 35.0%
! TTAAAAAAGGTGTATGCTGC+TGG - tig0031566:2181-2200 None:intergenic 35.0%
CCGCCCAAAATCATTAAAAA+AGG - tig0031566:2194-2213 None:intergenic 35.0%
CAGATCCTTTATCTTCACTT+TGG - tig0031566:2222-2241 None:intergenic 35.0%
GACAATGGGAGATACTATTA+TGG + tig0031566:2470-2489 Msa1447010:intron 35.0%
CAATGGGAGATACTATTATG+GGG + tig0031566:2472-2491 Msa1447010:intron 35.0%
GATACTATTATGGGGTTCTA+AGG + tig0031566:2480-2499 Msa1447010:intron 35.0%
!! CGATTCTAAGATCATCAACA+GGG - tig0031566:2761-2780 None:intergenic 35.0%
!! TCGATTCTAAGATCATCAAC+AGG - tig0031566:2762-2781 None:intergenic 35.0%
!! TGTTGATGATCTTAGAATCG+AGG + tig0031566:2761-2780 Msa1447010:intron 35.0%
TCATTTATCAATCCAGTGAG+AGG - tig0031566:3046-3065 None:intergenic 35.0%
TGAAAAAATCTCGGGAATAG+CGG - tig0031566:3398-3417 None:intergenic 35.0%
GCCGAAAAAAAAGATTCTGA+TGG + tig0031566:3461-3480 Msa1447010:CDS 35.0%
TGAACAAGATGCAAATGACA+TGG + tig0031566:3500-3519 Msa1447010:CDS 35.0%
TCAGGGTCAAAATCAAGTAT+TGG - tig0031566:3540-3559 None:intergenic 35.0%
!! TTGATTTTGACCCTGAAAAG+AGG + tig0031566:3544-3563 Msa1447010:CDS 35.0%
TTGGATCACTTCAAGCATTC+AGG + tig0031566:971-990 Msa1447010:CDS 40.0%
TGGATCACTTCAAGCATTCA+GGG + tig0031566:972-991 Msa1447010:CDS 40.0%
ATCTCTTTAACCATGGAGAG+AGG - tig0031566:1085-1104 None:intergenic 40.0%
!!! TTTTCATGTTCTAGTGGGCT+TGG + tig0031566:1108-1127 Msa1447010:CDS 40.0%
! TTCACTGATTGATCCGTCAA+AGG + tig0031566:1195-1214 Msa1447010:CDS 40.0%
GATTTCCTTGGATCCTTTGA+CGG - tig0031566:1211-1230 None:intergenic 40.0%
TCAAAGGATCCAAGGAAATC+AGG + tig0031566:1211-1230 Msa1447010:CDS 40.0%
! TTGGTGTTTGGAAGGATAAG+TGG - tig0031566:1241-1260 None:intergenic 40.0%
GAACCAGGAGAAGAAAATGA+AGG + tig0031566:1327-1346 Msa1447010:CDS 40.0%
! TTCCCTTCATTTTCTTCTCC+TGG - tig0031566:1333-1352 None:intergenic 40.0%
GGAGAAGAAAATGAAGGGAA+AGG + tig0031566:1333-1352 Msa1447010:CDS 40.0%
AAATGAAGGGAAAGGGTAAG+AGG + tig0031566:1341-1360 Msa1447010:CDS 40.0%
AATGAAGGGAAAGGGTAAGA+GGG + tig0031566:1342-1361 Msa1447010:CDS 40.0%
TGATTGTAAAGAACCTGAGC+AGG + tig0031566:1411-1430 Msa1447010:CDS 40.0%
ATCAACACAGACCACTGAAA+AGG + tig0031566:1507-1526 Msa1447010:CDS 40.0%
TTCTTATGACCATCGTTTCC+TGG - tig0031566:1541-1560 None:intergenic 40.0%
TGTTGATCTTAAGTGCAAGC+TGG + tig0031566:1597-1616 Msa1447010:CDS 40.0%
!! AAGTGCAAGCTGGTTGATTT+TGG + tig0031566:1607-1626 Msa1447010:CDS 40.0%
TTAGAACCAAGAAGAACCTC+AGG - tig0031566:1694-1713 None:intergenic 40.0%
! GTTCTTTTTGATCCTCACAG+TGG + tig0031566:1778-1797 Msa1447010:CDS 40.0%
ACAGTGGTGACAACTATGAT+AGG + tig0031566:1794-1813 Msa1447010:CDS 40.0%
CAGTGGTGACAACTATGATA+GGG + tig0031566:1795-1814 Msa1447010:CDS 40.0%
TGACAACTATGATAGGGATG+AGG + tig0031566:1801-1820 Msa1447010:CDS 40.0%
! TGAGTGTTTTCTGAACAGAG+TGG + tig0031566:1944-1963 Msa1447010:intron 40.0%
ATTATATGCCAAGAGAAGGC+TGG + tig0031566:2360-2379 Msa1447010:intron 40.0%
TTATATGCCAAGAGAAGGCT+GGG + tig0031566:2361-2380 Msa1447010:intron 40.0%
TCTCCTTTGTGCTTAGCATT+TGG + tig0031566:2647-2666 Msa1447010:intron 40.0%
GTTCCAAATGCTAAGCACAA+AGG - tig0031566:2653-2672 None:intergenic 40.0%
! TTGTGCTTAGCATTTGGAAC+TGG + tig0031566:2653-2672 Msa1447010:intron 40.0%
ATGATATGGGCTTCAAGTCT+CGG - tig0031566:2857-2876 None:intergenic 40.0%
!! GCATTGATGATGGAACTTCT+TGG + tig0031566:3093-3112 Msa1447010:CDS 40.0%
GATAACTTTCCTACCTTGCT+AGG - tig0031566:3126-3145 None:intergenic 40.0%
TATTTCCTGCAGATTGCACT+TGG + tig0031566:3369-3388 Msa1447010:intron 40.0%
TCAATAGACATGGTGACTTG+AGG + tig0031566:3415-3434 Msa1447010:CDS 40.0%
! GAATGCTCATTGATTGCATC+AGG - tig0031566:3651-3670 None:intergenic 40.0%
TGAAAAGAGAAGGAAGGACA+AGG + tig0031566:3674-3693 Msa1447010:CDS 40.0%
!! ATGTTGATGACTTTACGGGT+CGG - tig0031566:3779-3798 None:intergenic 40.0%
TTCAAGCATTCAGGGCCTAA+TGG + tig0031566:980-999 Msa1447010:CDS 45.0%
ATACACACATGCACGCCATT+AGG - tig0031566:998-1017 None:intergenic 45.0%
TAATGGCGTGCATGTGTGTA+TGG + tig0031566:997-1016 Msa1447010:CDS 45.0%
GGGTGAGAAGATTATCACCA+AGG - tig0031566:1033-1052 None:intergenic 45.0%
TTGATCCGTCAAAGGATCCA+AGG + tig0031566:1203-1222 Msa1447010:CDS 45.0%
! TTCTTCTCCTGGTTCTTCGT+CGG - tig0031566:1322-1341 None:intergenic 45.0%
TGTTGAGAAGGAAAGTCCAG+AGG + tig0031566:1378-1397 Msa1447010:CDS 45.0%
AAGGAAAGTCCAGAGGAATC+TGG + tig0031566:1385-1404 Msa1447010:CDS 45.0%
AGGAAAGTCCAGAGGAATCT+GGG + tig0031566:1386-1405 Msa1447010:CDS 45.0%
GCAGCTTCTTTCTCATGGAA+CGG - tig0031566:1570-1589 None:intergenic 45.0%
TTCCATGAGAAAGAAGCTGC+TGG + tig0031566:1570-1589 Msa1447010:CDS 45.0%
AAGGCAATATAGGTGTCCTG+AGG + tig0031566:1675-1694 Msa1447010:CDS 45.0%
ACTCAACTCCAGCAGATATG+TGG + tig0031566:1716-1735 Msa1447010:CDS 45.0%
CTCAAAGCAGATGCAAGCAA+AGG - tig0031566:1743-1762 None:intergenic 45.0%
TCATAGTTGTCACCACTGTG+AGG - tig0031566:1793-1812 None:intergenic 45.0%
! GTGAAAAAAGTGCATGCTGC+TGG + tig0031566:2074-2093 Msa1447010:intron 45.0%
TGCTGGTACTCGATCAAAGT+TGG + tig0031566:2091-2110 Msa1447010:intron 45.0%
TGTTCGACTCAATTGAGCAG+CGG - tig0031566:2153-2172 None:intergenic 45.0%
! AAAAGGTGTATGCTGCTGGT+TGG - tig0031566:2177-2196 None:intergenic 45.0%
GTCAAAGCTTCCCATTCTTG+TGG + tig0031566:2984-3003 Msa1447010:intron 45.0%
!! GGATCATCTGGCATTGATGA+TGG + tig0031566:3083-3102 Msa1447010:intron 45.0%
TCTTGGAAAGATGCCTAGCA+AGG + tig0031566:3110-3129 Msa1447010:CDS 45.0%
GGTAGGAAAGTTATCTGCTC+TGG + tig0031566:3131-3150 Msa1447010:intron 45.0%
AGGAAAGTTATCTGCTCTGG+TGG + tig0031566:3134-3153 Msa1447010:intron 45.0%
ACATCCATGAGTTGCGATTC+TGG + tig0031566:3439-3458 Msa1447010:CDS 45.0%
CACTTATCCATGGATGGGTA+AGG - tig0031566:3587-3606 None:intergenic 45.0%
ACCTGCACTTATCCATGGAT+GGG - tig0031566:3592-3611 None:intergenic 45.0%
GGTTGTGTACTAGTCAGTGA+GGG - tig0031566:3630-3649 None:intergenic 45.0%
AGGTTGTGTACTAGTCAGTG+AGG - tig0031566:3631-3650 None:intergenic 45.0%
GAGAAGGAAGGACAAGGAAA+AGG + tig0031566:3680-3699 Msa1447010:CDS 45.0%
!!! CGGGAGTTTTTGAGTGACAT+AGG - tig0031566:3759-3778 None:intergenic 45.0%
!! TGTTGATGACTTTACGGGTC+GGG - tig0031566:3778-3797 None:intergenic 45.0%
! AGTGGAGCACCTGATTTCCT+TGG - tig0031566:1223-1242 None:intergenic 50.0%
GGAAAGTCCAGAGGAATCTG+GGG + tig0031566:1387-1406 Msa1447010:CDS 50.0%
CAATCATCCCCAGATTCCTC+TGG - tig0031566:1397-1416 None:intergenic 50.0%
! TGGTGCAAGGTCCTTTTCAG+TGG - tig0031566:1521-1540 None:intergenic 50.0%
ACTGAAAAGGACCTTGCACC+AGG + tig0031566:1520-1539 Msa1447010:CDS 50.0%
TGCCAGCAGCTTCTTTCTCA+TGG - tig0031566:1575-1594 None:intergenic 50.0%
AGGTGTCCTGAGGTTCTTCT+TGG + tig0031566:1685-1704 Msa1447010:CDS 50.0%
GCAAAGGACCACATATCTGC+TGG - tig0031566:1727-1746 None:intergenic 50.0%
! ATCTGCTTTGAGCTTGCCAC+TGG + tig0031566:1751-1770 Msa1447010:CDS 50.0%
TATCTCACCCAGCCTTCTCT+TGG - tig0031566:2371-2390 None:intergenic 50.0%
!! ATGCATTGGCTTCCTCTCAC+TGG + tig0031566:3031-3050 Msa1447010:intron 50.0%
GGAAAGATGCCTAGCAAGGT+AGG + tig0031566:3114-3133 Msa1447010:intron 50.0%
TTCCTGCAGATTGCACTTGG+TGG + tig0031566:3372-3391 Msa1447010:intron 50.0%
!! CAGCTGTTGGCCTCTTTTCA+GGG - tig0031566:3557-3576 None:intergenic 50.0%
ACCCATCCATGGATAAGTGC+AGG + tig0031566:3588-3607 Msa1447010:CDS 50.0%
GACCTGCACTTATCCATGGA+TGG - tig0031566:3593-3612 None:intergenic 50.0%
AACTTCCACCAACTCCTGCT+CGG - tig0031566:3706-3725 None:intergenic 50.0%
!! AGTTGGTGGAAGTTGGTGTG+AGG + tig0031566:3712-3731 Msa1447010:CDS 50.0%
TCGTGGAGTTCCTCTCTCCA+TGG + tig0031566:1072-1091 Msa1447010:CDS 55.0%
TGGAGATCCGACGAAGAACC+AGG + tig0031566:1312-1331 Msa1447010:CDS 55.0%
GAAGGGAAAGGGTAAGAGGG+TGG + tig0031566:1345-1364 Msa1447010:CDS 55.0%
AAGGGTAAGAGGGTGGCTCA+AGG + tig0031566:1352-1371 Msa1447010:CDS 55.0%
GGCTCAAGGCTGTGTTGAGA+AGG + tig0031566:1366-1385 Msa1447010:CDS 55.0%
GACCTTGCACCAGGAAACGA+TGG + tig0031566:1529-1548 Msa1447010:CDS 55.0%
GACCATCGTTTCCTGGTGCA+AGG - tig0031566:1534-1553 None:intergenic 55.0%
CGATCAAAGTTGGCTGCTGC+TGG + tig0031566:2101-2120 Msa1447010:intron 55.0%
ACTGCTGGGAGCTGTAGAGA+CGG - tig0031566:2129-2148 None:intergenic 55.0%
AATTGAGCAGCGGCACTGCT+GGG - tig0031566:2143-2162 None:intergenic 55.0%
TCGGCCAGAATCGCAACTCA+TGG - tig0031566:3446-3465 None:intergenic 55.0%
!! GCAGCTGTTGGCCTCTTTTC+AGG - tig0031566:3558-3577 None:intergenic 55.0%
!! GTAAGGCACTGAGCAGCTGT+TGG - tig0031566:3570-3589 None:intergenic 55.0%
CTCAGTGCCTTACCCATCCA+TGG + tig0031566:3577-3596 Msa1447010:CDS 55.0%
CGAGGACCTGCACTTATCCA+TGG - tig0031566:3597-3616 None:intergenic 55.0%
AGTGAGGGCTCAAGAGTTCG+AGG - tig0031566:3615-3634 None:intergenic 55.0%
!! GAGCAGGAGTTGGTGGAAGT+TGG + tig0031566:3705-3724 Msa1447010:CDS 55.0%
CAATTGAGCAGCGGCACTGC+TGG - tig0031566:2144-2163 None:intergenic 60.0%
GGCCACCAAGTGCAATCTGC+AGG - tig0031566:3377-3396 None:intergenic 60.0%
GGACAAGGAAAAGGCCGAGC+AGG + tig0031566:3689-3708 Msa1447010:CDS 60.0%
GGAAAAGGCCGAGCAGGAGT+TGG + tig0031566:3695-3714 Msa1447010:CDS 60.0%
AAAGGCCGAGCAGGAGTTGG+TGG + tig0031566:3698-3717 Msa1447010:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0031566 gene 899 3800 899 ID=Msa1447010;Name=Msa1447010
tig0031566 mRNA 899 3800 899 ID=Msa1447010-mRNA-1;Parent=Msa1447010;Name=Msa1447010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|467
tig0031566 exon 899 1834 899 ID=Msa1447010-mRNA-1:exon:15702;Parent=Msa1447010-mRNA-1
tig0031566 exon 3084 3131 3084 ID=Msa1447010-mRNA-1:exon:15703;Parent=Msa1447010-mRNA-1
tig0031566 exon 3381 3800 3381 ID=Msa1447010-mRNA-1:exon:15704;Parent=Msa1447010-mRNA-1
tig0031566 CDS 899 1834 899 ID=Msa1447010-mRNA-1:cds;Parent=Msa1447010-mRNA-1
tig0031566 CDS 3084 3131 3084 ID=Msa1447010-mRNA-1:cds;Parent=Msa1447010-mRNA-1
tig0031566 CDS 3381 3800 3381 ID=Msa1447010-mRNA-1:cds;Parent=Msa1447010-mRNA-1
Gene Sequence

>Msa1447010

ATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGACAAAAAATGTGTTGTGAAGCTTTTGGATCACTTCAAGCATTCAGGGCCTAATGGCGTGCATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTCTCCATGGTTAAAGAGATATGTTTTCATGTTCTAGTGGGCTTGGATTACTTGCATCGTGAGCTATCTGTCATACACACTGATTTGAAGCCTGAGAATGTGTTACTTCATTCACTGATTGATCCGTCAAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAAAATAAGTCCGTGTCTAATAATGACATTATCCAAAACAGTAAAATTGGGAATGGAGATCCGACGAAGAACCAGGAGAAGAAAATGAAGGGAAAGGGTAAGAGGGTGGCTCAAGGCTGTGTTGAGAAGGAAAGTCCAGAGGAATCTGGGGATGATTGTAAAGAACCTGAGCAGGATAATTGTAACAATGTGAAATCCAGTGTAGAATCTGTTGAAAACAAACCCAATAGCTCTTCGAGTAAAGTTGAATCAACACAGACCACTGAAAAGGACCTTGCACCAGGAAACGATGGTCATAAGAAAAGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCAGATATGTGGTCCTTTGCTTGCATCTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGCAAGTTCCCCTGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACATGGTGACTTGAGGCACATCCATGAGTTGCGATTCTGGCCGAAAAAAAAGATTCTGATGGAGAAGTATAGTTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTACCCATCCATGGATAAGTGCAGGTCCTCGAACTCTTGAGCCCTCACTGACTAGTACACAACCTGATGCAATCAATGAGCATTCATTTGAAAAGAGAAGGAAGGACAAGGAAAAGGCCGAGCAGGAGTTGGTGGAAGTTGGTGTGAGGAATATATCTATTAATGGATCTCCTATGTCACTCAAAAACTCCCGACCCGTAAAGTCATCAACATAG
Protein sequence

>Msa1447010

MDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGVHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHVLVGLDYLHRELSVIHTDLKPENVLLHSLIDPSKDPRKSGAPLILPNTKNKSVSNNDIIQNSKIGNGDPTKNQEKKMKGKGKRVAQGCVEKESPEESGDDCKEPEQDNCNNVKSSVESVENKPNSSSSKVESTQTTEKDLAPGNDGHKKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEASSPDHLALMMELLGKMPSKIALGGRYSRDFFNRHGDLRHIHELRFWPKKKILMEKYSFSEQDANDMADFLLPILDFDPEKRPTAAQCLTHPWISAGPRTLEPSLTSTQPDAINEHSFEKRRKDKEKAEQELVEVGVRNISINGSPMSLKNSRPVKSST*