Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1447390 | sp|O82743|AGL19_ARATH | 75.309 | 81 | 20 | 0 | 1 | 81 | 1 | 81 | 3.67e-38 | 129 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1447390 | A0A072UQQ3 | 97.727 | 88 | 2 | 0 | 1 | 88 | 1 | 88 | 5.15e-53 | 173 |
Gene ID | Type | Classification |
---|---|---|
Msa1447390 | TF | MADS-M-type |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1447390 | Msa1451320 | 0.999413 | 1.110589e-309 | -8.615850e-47 |
Msa1225370 | Msa1447390 | 0.809367 | 1.959757e-50 | -8.615850e-47 |
Msa1298260 | Msa1447390 | 0.862731 | 4.117224e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1447390 | MtrunA17_Chr4g0057151 | 97.727 | 88 | 2 | 0 | 1 | 88 | 1 | 88 | 9.91e-57 | 173 |
Msa1447390 | MtrunA17_Chr8g0351041 | 81.081 | 74 | 14 | 0 | 1 | 74 | 1 | 74 | 6.05e-39 | 127 |
Msa1447390 | MtrunA17_Chr8g0351031 | 81.081 | 74 | 14 | 0 | 1 | 74 | 1 | 74 | 1.73e-38 | 127 |
Msa1447390 | MtrunA17_Chr7g0246431 | 68.182 | 88 | 28 | 0 | 1 | 88 | 1 | 88 | 2.58e-38 | 127 |
Msa1447390 | MtrunA17_Chr8g0351051 | 74.286 | 70 | 18 | 0 | 1 | 70 | 1 | 70 | 1.39e-32 | 113 |
Msa1447390 | MtrunA17_Chr3g0097101 | 71.429 | 70 | 20 | 0 | 1 | 70 | 16 | 85 | 2.84e-32 | 112 |
Msa1447390 | MtrunA17_Chr3g0077501 | 71.429 | 70 | 20 | 0 | 1 | 70 | 1 | 70 | 5.04e-32 | 111 |
Msa1447390 | MtrunA17_Chr5g0420091 | 71.831 | 71 | 19 | 1 | 1 | 70 | 1 | 71 | 5.81e-32 | 110 |
Msa1447390 | MtrunA17_Chr3g0122251 | 76.056 | 71 | 16 | 1 | 1 | 70 | 1 | 71 | 6.44e-32 | 111 |
Msa1447390 | MtrunA17_Chr2g0284911 | 59.302 | 86 | 35 | 0 | 3 | 88 | 18 | 103 | 1.28e-31 | 110 |
Msa1447390 | MtrunA17_Chr8g0380021 | 72.059 | 68 | 19 | 0 | 3 | 70 | 19 | 86 | 1.29e-31 | 110 |
Msa1447390 | MtrunA17_Chr7g0220111 | 73.239 | 71 | 18 | 1 | 1 | 70 | 1 | 71 | 2.25e-31 | 110 |
Msa1447390 | MtrunA17_Chr6g0455511 | 73.239 | 71 | 18 | 1 | 1 | 70 | 1 | 71 | 3.69e-31 | 109 |
Msa1447390 | MtrunA17_Chr4g0061671 | 70.423 | 71 | 20 | 1 | 1 | 70 | 1 | 71 | 8.16e-31 | 107 |
Msa1447390 | MtrunA17_Chr2g0279821 | 69.565 | 69 | 21 | 0 | 1 | 69 | 1 | 69 | 3.47e-30 | 106 |
Msa1447390 | MtrunA17_Chr7g0246381 | 75.410 | 61 | 15 | 0 | 1 | 61 | 1 | 61 | 3.93e-29 | 99.4 |
Msa1447390 | MtrunA17_Chr4g0061691 | 70.423 | 71 | 20 | 1 | 1 | 70 | 1 | 71 | 8.06e-29 | 103 |
Msa1447390 | MtrunA17_Chr4g0020221 | 69.565 | 69 | 21 | 0 | 1 | 69 | 1 | 69 | 1.27e-28 | 103 |
Msa1447390 | MtrunA17_Chr1g0204111 | 65.714 | 70 | 24 | 0 | 1 | 70 | 17 | 86 | 1.81e-28 | 102 |
Msa1447390 | MtrunA17_Chr1g0173161 | 75.806 | 62 | 15 | 0 | 1 | 62 | 1 | 62 | 1.88e-28 | 97.8 |
Msa1447390 | MtrunA17_Chr8g0377561 | 77.586 | 58 | 13 | 0 | 1 | 58 | 1 | 58 | 3.08e-28 | 97.8 |
Msa1447390 | MtrunA17_Chr5g0412271 | 63.636 | 77 | 28 | 0 | 1 | 77 | 1 | 77 | 3.51e-28 | 101 |
Msa1447390 | MtrunA17_Chr2g0308251 | 68.116 | 69 | 22 | 0 | 1 | 69 | 1 | 69 | 4.03e-28 | 97.1 |
Msa1447390 | MtrunA17_Chr5g0412461 | 63.636 | 77 | 28 | 0 | 1 | 77 | 1 | 77 | 5.33e-28 | 100 |
Msa1447390 | MtrunA17_Chr8g0366231 | 69.014 | 71 | 21 | 1 | 1 | 70 | 1 | 71 | 6.01e-28 | 100 |
Msa1447390 | MtrunA17_Chr6g0474371 | 66.197 | 71 | 23 | 1 | 1 | 70 | 1 | 71 | 6.27e-28 | 99.8 |
Msa1447390 | MtrunA17_Chr4g0049541 | 60.000 | 75 | 30 | 0 | 1 | 75 | 1 | 75 | 1.08e-26 | 97.4 |
Msa1447390 | MtrunA17_Chr5g0427921 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 2.09e-26 | 92.0 |
Msa1447390 | MtrunA17_Chr5g0427401 | 60.870 | 69 | 27 | 0 | 1 | 69 | 1 | 69 | 2.24e-26 | 96.7 |
Msa1447390 | MtrunA17_Chr3g0142191 | 62.667 | 75 | 26 | 1 | 1 | 73 | 1 | 75 | 3.19e-26 | 96.3 |
Msa1447390 | MtrunA17_Chr7g0220121 | 64.789 | 71 | 24 | 1 | 1 | 70 | 1 | 71 | 3.65e-26 | 96.7 |
Msa1447390 | MtrunA17_Chr5g0420081 | 56.667 | 90 | 35 | 1 | 1 | 86 | 1 | 90 | 9.58e-26 | 95.1 |
Msa1447390 | MtrunA17_Chr5g0411691 | 59.420 | 69 | 28 | 0 | 1 | 69 | 1 | 69 | 1.08e-25 | 95.1 |
Msa1447390 | MtrunA17_Chr4g0049901 | 61.972 | 71 | 27 | 0 | 1 | 71 | 27 | 97 | 1.17e-25 | 95.1 |
Msa1447390 | MtrunA17_Chr3g0125241 | 58.333 | 72 | 28 | 1 | 1 | 70 | 26 | 97 | 1.27e-25 | 94.4 |
Msa1447390 | MtrunA17_Chr4g0018421 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.71e-25 | 92.0 |
Msa1447390 | MtrunA17_Chr1g0164791 | 56.944 | 72 | 29 | 1 | 1 | 70 | 1 | 72 | 1.75e-23 | 89.4 |
Msa1447390 | MtrunA17_Chr3g0134451 | 64.286 | 70 | 24 | 1 | 1 | 69 | 1 | 70 | 2.18e-23 | 90.5 |
Msa1447390 | MtrunA17_Chr5g0404951 | 51.250 | 80 | 37 | 1 | 1 | 78 | 1 | 80 | 4.17e-23 | 88.2 |
Msa1447390 | MtrunA17_Chr1g0159661 | 52.778 | 72 | 32 | 1 | 1 | 70 | 1 | 72 | 6.02e-23 | 86.7 |
Msa1447390 | MtrunA17_Chr1g0166611 | 83.333 | 48 | 8 | 0 | 13 | 60 | 17 | 64 | 1.31e-22 | 84.7 |
Msa1447390 | MtrunA17_Chr5g0425191 | 65.517 | 58 | 20 | 0 | 1 | 58 | 1 | 58 | 2.94e-22 | 82.8 |
Msa1447390 | MtrunA17_Chr4g0044071 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 4.94e-22 | 82.4 |
Msa1447390 | MtrunA17_Chr1g0208561 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 4.06e-21 | 83.2 |
Msa1447390 | MtrunA17_Chr2g0325971 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 4.37e-21 | 83.2 |
Msa1447390 | MtrunA17_Chr1g0208581 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 4.76e-21 | 82.8 |
Msa1447390 | MtrunA17_Chr3g0089141 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 5.02e-21 | 82.8 |
Msa1447390 | MtrunA17_Chr2g0292791 | 52.055 | 73 | 35 | 0 | 3 | 75 | 10 | 82 | 8.00e-21 | 82.4 |
Msa1447390 | MtrunA17_Chr3g0099411 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 1.42e-20 | 81.6 |
Msa1447390 | MtrunA17_Chr8g0355091 | 52.055 | 73 | 35 | 0 | 3 | 75 | 10 | 82 | 2.43e-20 | 81.3 |
Msa1447390 | MtrunA17_Chr1g0206721 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 2.56e-20 | 81.3 |
Msa1447390 | MtrunA17_Chr3g0099421 | 52.055 | 73 | 35 | 0 | 3 | 75 | 35 | 107 | 2.62e-20 | 81.6 |
Msa1447390 | MtrunA17_Chr1g0206701 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 5.00e-20 | 80.5 |
Msa1447390 | MtrunA17_Chr1g0187361 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 5.32e-20 | 80.5 |
Msa1447390 | MtrunA17_Chr1g0149391 | 50.000 | 72 | 36 | 0 | 3 | 74 | 10 | 81 | 1.97e-19 | 79.0 |
Msa1447390 | MtrunA17_Chr5g0419601 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 5.92e-19 | 77.8 |
Msa1447390 | MtrunA17_Chr2g0317481 | 52.239 | 67 | 32 | 0 | 3 | 69 | 10 | 76 | 6.79e-19 | 77.4 |
Msa1447390 | MtrunA17_Chr2g0317451 | 52.239 | 67 | 32 | 0 | 3 | 69 | 10 | 76 | 6.79e-19 | 77.4 |
Msa1447390 | MtrunA17_Chr1g0188671 | 52.113 | 71 | 34 | 0 | 3 | 73 | 48 | 118 | 1.60e-18 | 77.0 |
Msa1447390 | MtrunA17_Chr1g0206991 | 47.887 | 71 | 37 | 0 | 3 | 73 | 10 | 80 | 1.68e-18 | 75.5 |
Msa1447390 | MtrunA17_Chr5g0422941 | 47.945 | 73 | 38 | 0 | 3 | 75 | 10 | 82 | 4.77e-18 | 75.1 |
Msa1447390 | MtrunA17_Chr5g0422421 | 49.296 | 71 | 36 | 0 | 3 | 73 | 10 | 80 | 7.49e-18 | 74.7 |
Msa1447390 | MtrunA17_Chr8g0379021 | 49.254 | 67 | 34 | 0 | 3 | 69 | 13 | 79 | 8.47e-18 | 73.6 |
Msa1447390 | MtrunA17_Chr2g0300421 | 49.254 | 67 | 34 | 0 | 3 | 69 | 10 | 76 | 2.30e-17 | 72.4 |
Msa1447390 | MtrunA17_Chr4g0018951 | 54.839 | 62 | 28 | 0 | 15 | 76 | 25 | 86 | 4.14e-17 | 71.2 |
Msa1447390 | MtrunA17_Chr1g0187351 | 52.542 | 59 | 28 | 0 | 11 | 69 | 1 | 59 | 4.89e-17 | 68.6 |
Msa1447390 | MtrunA17_Chr3g0089151 | 44.444 | 81 | 43 | 1 | 2 | 80 | 7 | 87 | 5.01e-17 | 70.5 |
Msa1447390 | MtrunA17_Chr2g0333981 | 49.275 | 69 | 35 | 0 | 1 | 69 | 11 | 79 | 6.63e-17 | 71.2 |
Msa1447390 | MtrunA17_Chr8g0376821 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 8.39e-17 | 70.9 |
Msa1447390 | MtrunA17_Chr8g0357771 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 8.85e-17 | 70.9 |
Msa1447390 | MtrunA17_Chr3g0111841 | 57.627 | 59 | 24 | 1 | 8 | 66 | 2 | 59 | 1.17e-16 | 67.8 |
Msa1447390 | MtrunA17_Chr1g0206691 | 49.231 | 65 | 33 | 0 | 11 | 75 | 1 | 65 | 1.38e-16 | 71.2 |
Msa1447390 | MtrunA17_Chr1g0175611 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 1.87e-16 | 69.7 |
Msa1447390 | MtrunA17_Chr1g0169761 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 2.30e-16 | 69.7 |
Msa1447390 | MtrunA17_Chr2g0300441 | 44.737 | 76 | 42 | 0 | 5 | 80 | 12 | 87 | 2.82e-16 | 70.5 |
Msa1447390 | MtrunA17_Chr1g0180591 | 44.928 | 69 | 38 | 0 | 1 | 69 | 1 | 69 | 2.82e-16 | 69.3 |
Msa1447390 | MtrunA17_Chr4g0052081 | 43.421 | 76 | 43 | 0 | 1 | 76 | 1 | 76 | 3.25e-16 | 69.3 |
Msa1447390 | MtrunA17_Chr4g0074101 | 43.038 | 79 | 45 | 0 | 1 | 79 | 1 | 79 | 3.71e-16 | 69.7 |
Msa1447390 | MtrunA17_Chr1g0175601 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 9.09e-16 | 68.2 |
Msa1447390 | MtrunA17_Chr3g0119901 | 44.776 | 67 | 37 | 0 | 3 | 69 | 10 | 76 | 1.31e-15 | 68.2 |
Msa1447390 | MtrunA17_Chr3g0085241 | 46.269 | 67 | 36 | 0 | 3 | 69 | 42 | 108 | 2.20e-15 | 68.2 |
Msa1447390 | MtrunA17_Chr4g0060841 | 46.479 | 71 | 36 | 1 | 1 | 69 | 1 | 71 | 2.44e-15 | 68.9 |
Msa1447390 | MtrunA17_Chr5g0417661 | 52.830 | 53 | 25 | 0 | 1 | 53 | 56 | 108 | 2.95e-15 | 65.9 |
Msa1447390 | MtrunA17_Chr4g0052061 | 42.029 | 69 | 40 | 0 | 1 | 69 | 1 | 69 | 1.99e-14 | 64.3 |
Msa1447390 | MtrunA17_Chr8g0356071 | 40.580 | 69 | 41 | 0 | 1 | 69 | 1 | 69 | 1.65e-13 | 62.0 |
Msa1447390 | MtrunA17_Chr7g0238991 | 43.478 | 69 | 38 | 1 | 2 | 69 | 20 | 88 | 2.09e-12 | 60.5 |
Msa1447390 | MtrunA17_Chr4g0071601 | 50.909 | 55 | 27 | 0 | 15 | 69 | 25 | 79 | 2.16e-12 | 59.3 |
Msa1447390 | MtrunA17_Chr3g0111831 | 45.161 | 62 | 34 | 0 | 9 | 70 | 11 | 72 | 4.75e-12 | 56.2 |
Msa1447390 | MtrunA17_Chr3g0111931 | 41.429 | 70 | 38 | 1 | 14 | 83 | 2 | 68 | 7.97e-11 | 53.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1447390 | AT4G22950.2 | 75.309 | 81 | 20 | 0 | 1 | 81 | 1 | 81 | 1.04e-39 | 129 |
Msa1447390 | AT4G22950.3 | 75.309 | 81 | 20 | 0 | 1 | 81 | 1 | 81 | 3.73e-39 | 129 |
Msa1447390 | AT4G22950.1 | 75.309 | 81 | 20 | 0 | 1 | 81 | 1 | 81 | 3.73e-39 | 129 |
Msa1447390 | AT4G11880.2 | 72.527 | 91 | 23 | 2 | 1 | 90 | 1 | 90 | 3.98e-39 | 128 |
Msa1447390 | AT4G11880.3 | 72.527 | 91 | 23 | 2 | 1 | 90 | 1 | 90 | 3.98e-39 | 128 |
Msa1447390 | AT4G11880.4 | 72.527 | 91 | 23 | 2 | 1 | 90 | 1 | 90 | 5.50e-39 | 129 |
Msa1447390 | AT4G11880.1 | 72.527 | 91 | 23 | 2 | 1 | 90 | 1 | 90 | 5.50e-39 | 129 |
Msa1447390 | AT2G45660.2 | 69.663 | 89 | 25 | 2 | 1 | 88 | 1 | 88 | 5.69e-38 | 124 |
Msa1447390 | AT2G45660.1 | 69.663 | 89 | 25 | 2 | 1 | 88 | 1 | 88 | 3.48e-37 | 124 |
Msa1447390 | AT5G62165.14 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 2.22e-34 | 114 |
Msa1447390 | AT5G62165.6 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 4.85e-34 | 114 |
Msa1447390 | AT5G62165.9 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 4.85e-34 | 114 |
Msa1447390 | AT5G62165.7 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 4.85e-34 | 114 |
Msa1447390 | AT5G62165.8 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 4.85e-34 | 114 |
Msa1447390 | AT5G62165.13 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 4.85e-34 | 114 |
Msa1447390 | AT5G62165.17 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 6.18e-34 | 114 |
Msa1447390 | AT5G62165.12 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 6.18e-34 | 114 |
Msa1447390 | AT5G62165.11 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 6.18e-34 | 114 |
Msa1447390 | AT2G45650.1 | 65.909 | 88 | 29 | 1 | 1 | 88 | 1 | 87 | 1.78e-33 | 115 |
Msa1447390 | AT5G62165.10 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 2.44e-33 | 114 |
Msa1447390 | AT5G62165.4 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 2.44e-33 | 114 |
Msa1447390 | AT5G62165.3 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 3.49e-33 | 114 |
Msa1447390 | AT5G62165.1 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 3.49e-33 | 114 |
Msa1447390 | AT5G62165.2 | 61.364 | 88 | 34 | 0 | 1 | 88 | 1 | 88 | 3.49e-33 | 114 |
Msa1447390 | AT4G09960.2 | 63.529 | 85 | 30 | 1 | 1 | 85 | 1 | 84 | 5.21e-33 | 114 |
Msa1447390 | AT4G09960.1 | 63.529 | 85 | 30 | 1 | 1 | 85 | 1 | 84 | 7.57e-33 | 114 |
Msa1447390 | AT4G09960.6 | 63.529 | 85 | 30 | 1 | 1 | 85 | 2 | 85 | 7.59e-33 | 114 |
Msa1447390 | AT4G09960.5 | 63.529 | 85 | 30 | 1 | 1 | 85 | 11 | 94 | 8.99e-33 | 114 |
Msa1447390 | AT4G09960.3 | 63.529 | 85 | 30 | 1 | 1 | 85 | 27 | 110 | 2.08e-32 | 113 |
Msa1447390 | AT1G24260.3 | 76.056 | 71 | 16 | 1 | 1 | 70 | 1 | 71 | 5.90e-32 | 111 |
Msa1447390 | AT4G18960.1 | 68.493 | 73 | 23 | 0 | 3 | 75 | 19 | 91 | 7.06e-32 | 112 |
Msa1447390 | AT1G24260.2 | 76.056 | 71 | 16 | 1 | 1 | 70 | 1 | 71 | 8.56e-32 | 111 |
Msa1447390 | AT4G09960.4 | 72.857 | 70 | 19 | 0 | 1 | 70 | 96 | 165 | 8.82e-32 | 113 |
Msa1447390 | AT1G24260.1 | 76.056 | 71 | 16 | 1 | 1 | 70 | 1 | 71 | 9.12e-32 | 111 |
Msa1447390 | AT3G58780.1 | 59.302 | 86 | 35 | 0 | 3 | 88 | 18 | 103 | 1.12e-31 | 111 |
Msa1447390 | AT3G58780.5 | 59.302 | 86 | 35 | 0 | 3 | 88 | 24 | 109 | 1.21e-31 | 111 |
Msa1447390 | AT3G58780.4 | 59.302 | 86 | 35 | 0 | 3 | 88 | 18 | 103 | 1.62e-31 | 111 |
Msa1447390 | AT2G42830.2 | 59.302 | 86 | 35 | 0 | 3 | 88 | 18 | 103 | 1.65e-31 | 110 |
Msa1447390 | AT2G42830.1 | 59.302 | 86 | 35 | 0 | 3 | 88 | 18 | 103 | 1.83e-31 | 110 |
Msa1447390 | AT5G15800.1 | 73.239 | 71 | 18 | 1 | 1 | 70 | 1 | 71 | 4.07e-31 | 109 |
Msa1447390 | AT5G15800.2 | 73.239 | 71 | 18 | 1 | 1 | 70 | 1 | 71 | 6.96e-31 | 109 |
Msa1447390 | AT3G02310.2 | 73.239 | 71 | 18 | 1 | 1 | 70 | 1 | 71 | 8.02e-31 | 107 |
Msa1447390 | AT3G02310.1 | 73.239 | 71 | 18 | 1 | 1 | 70 | 1 | 71 | 9.10e-31 | 108 |
Msa1447390 | AT2G03710.3 | 68.056 | 72 | 21 | 1 | 1 | 70 | 1 | 72 | 2.03e-30 | 106 |
Msa1447390 | AT3G57230.2 | 68.116 | 69 | 22 | 0 | 1 | 69 | 1 | 69 | 3.95e-30 | 104 |
Msa1447390 | AT2G03710.1 | 68.056 | 72 | 21 | 1 | 1 | 70 | 1 | 72 | 7.61e-30 | 106 |
Msa1447390 | AT2G03710.2 | 68.056 | 72 | 21 | 1 | 1 | 70 | 1 | 72 | 7.86e-30 | 106 |
Msa1447390 | AT3G61120.1 | 71.014 | 69 | 20 | 0 | 1 | 69 | 1 | 69 | 1.42e-29 | 105 |
Msa1447390 | AT3G57230.1 | 68.116 | 69 | 22 | 0 | 1 | 69 | 1 | 69 | 2.25e-29 | 105 |
Msa1447390 | AT3G57230.4 | 68.116 | 69 | 22 | 0 | 1 | 69 | 1 | 69 | 2.25e-29 | 105 |
Msa1447390 | AT5G13790.2 | 59.302 | 86 | 35 | 0 | 1 | 86 | 1 | 86 | 1.05e-28 | 103 |
Msa1447390 | AT5G60910.1 | 71.429 | 70 | 19 | 1 | 1 | 69 | 1 | 70 | 1.68e-28 | 102 |
Msa1447390 | AT5G51860.2 | 66.667 | 69 | 23 | 0 | 1 | 69 | 1 | 69 | 1.93e-28 | 101 |
Msa1447390 | AT5G51860.1 | 66.667 | 69 | 23 | 0 | 1 | 69 | 1 | 69 | 2.51e-28 | 101 |
Msa1447390 | AT1G69120.2 | 69.014 | 71 | 21 | 1 | 1 | 70 | 1 | 71 | 3.26e-28 | 102 |
Msa1447390 | AT5G13790.1 | 69.565 | 69 | 21 | 0 | 1 | 69 | 1 | 69 | 3.76e-28 | 102 |
Msa1447390 | AT5G51870.2 | 65.217 | 69 | 24 | 0 | 1 | 69 | 1 | 69 | 4.91e-28 | 99.8 |
Msa1447390 | AT1G69120.1 | 69.014 | 71 | 21 | 1 | 1 | 70 | 1 | 71 | 6.68e-28 | 101 |
Msa1447390 | AT3G57390.3 | 65.217 | 69 | 24 | 0 | 1 | 69 | 1 | 69 | 9.33e-28 | 100 |
Msa1447390 | AT5G51870.5 | 65.217 | 69 | 24 | 0 | 1 | 69 | 24 | 92 | 1.02e-27 | 99.8 |
Msa1447390 | AT5G51870.1 | 65.217 | 69 | 24 | 0 | 1 | 69 | 1 | 69 | 1.22e-27 | 99.8 |
Msa1447390 | AT2G22540.3 | 63.158 | 76 | 28 | 0 | 1 | 76 | 1 | 76 | 1.63e-27 | 100 |
Msa1447390 | AT2G22540.1 | 63.158 | 76 | 28 | 0 | 1 | 76 | 1 | 76 | 1.63e-27 | 100 |
Msa1447390 | AT5G51870.4 | 65.217 | 69 | 24 | 0 | 1 | 69 | 1 | 69 | 1.75e-27 | 99.8 |
Msa1447390 | AT3G57390.1 | 65.217 | 69 | 24 | 0 | 1 | 69 | 1 | 69 | 1.77e-27 | 100 |
Msa1447390 | AT3G58780.3 | 74.576 | 59 | 15 | 0 | 3 | 61 | 18 | 76 | 2.23e-27 | 100 |
Msa1447390 | AT5G51870.3 | 65.217 | 69 | 24 | 0 | 1 | 69 | 11 | 79 | 2.35e-27 | 99.8 |
Msa1447390 | AT4G37940.3 | 62.319 | 69 | 26 | 0 | 1 | 69 | 1 | 69 | 3.46e-27 | 97.8 |
Msa1447390 | AT3G58780.2 | 74.138 | 58 | 15 | 0 | 3 | 60 | 18 | 75 | 3.68e-27 | 99.4 |
Msa1447390 | AT1G26310.1 | 70.423 | 71 | 20 | 1 | 1 | 70 | 1 | 71 | 4.03e-27 | 99.8 |
Msa1447390 | AT4G37940.4 | 62.319 | 69 | 26 | 0 | 1 | 69 | 1 | 69 | 4.59e-27 | 98.6 |
Msa1447390 | AT4G37940.1 | 62.319 | 69 | 26 | 0 | 1 | 69 | 1 | 69 | 6.12e-27 | 98.6 |
Msa1447390 | AT2G14210.1 | 63.158 | 76 | 26 | 2 | 1 | 75 | 1 | 75 | 1.92e-26 | 97.4 |
Msa1447390 | AT2G14210.2 | 63.158 | 76 | 26 | 2 | 1 | 75 | 1 | 75 | 2.28e-26 | 97.4 |
Msa1447390 | AT3G30260.1 | 64.789 | 71 | 24 | 1 | 1 | 70 | 1 | 71 | 9.30e-26 | 95.9 |
Msa1447390 | AT3G54340.1 | 61.111 | 72 | 26 | 1 | 1 | 70 | 1 | 72 | 1.28e-25 | 95.1 |
Msa1447390 | AT2G22630.1 | 60.870 | 69 | 27 | 0 | 1 | 69 | 1 | 69 | 1.70e-25 | 94.7 |
Msa1447390 | AT2G22630.2 | 60.870 | 69 | 27 | 0 | 1 | 69 | 1 | 69 | 1.70e-25 | 94.7 |
Msa1447390 | AT4G24540.1 | 63.768 | 69 | 25 | 0 | 1 | 69 | 1 | 69 | 5.05e-25 | 93.6 |
Msa1447390 | AT5G10140.4 | 62.857 | 70 | 25 | 1 | 1 | 69 | 1 | 70 | 3.34e-24 | 90.5 |
Msa1447390 | AT5G10140.2 | 62.857 | 70 | 25 | 1 | 1 | 69 | 1 | 70 | 3.59e-24 | 89.7 |
Msa1447390 | AT5G10140.1 | 62.857 | 70 | 25 | 1 | 1 | 69 | 1 | 70 | 4.00e-24 | 90.5 |
Msa1447390 | AT5G10140.3 | 62.857 | 70 | 25 | 1 | 1 | 69 | 1 | 70 | 6.92e-24 | 89.7 |
Msa1447390 | AT1G71692.1 | 58.571 | 70 | 28 | 1 | 1 | 69 | 1 | 70 | 1.35e-23 | 89.4 |
Msa1447390 | AT5G20240.2 | 55.556 | 72 | 30 | 1 | 1 | 70 | 1 | 72 | 1.61e-23 | 87.8 |
Msa1447390 | AT5G23260.3 | 59.155 | 71 | 27 | 1 | 1 | 69 | 1 | 71 | 2.01e-23 | 89.7 |
Msa1447390 | AT5G23260.2 | 59.155 | 71 | 27 | 1 | 1 | 69 | 1 | 71 | 2.55e-23 | 89.7 |
Msa1447390 | AT5G23260.1 | 59.155 | 71 | 27 | 1 | 1 | 69 | 17 | 87 | 3.21e-23 | 89.7 |
Msa1447390 | AT5G23260.4 | 59.155 | 71 | 27 | 1 | 1 | 69 | 17 | 87 | 3.52e-23 | 89.7 |
Msa1447390 | AT5G65070.4 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 4.90e-23 | 86.3 |
Msa1447390 | AT5G20240.1 | 55.556 | 72 | 30 | 1 | 1 | 70 | 1 | 72 | 6.99e-23 | 87.4 |
Msa1447390 | AT5G65070.1 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 9.36e-23 | 87.0 |
Msa1447390 | AT5G65070.5 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 1.87e-22 | 86.7 |
Msa1447390 | AT5G65070.2 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 2.07e-22 | 87.0 |
Msa1447390 | AT2G22540.2 | 56.579 | 76 | 28 | 1 | 1 | 76 | 1 | 71 | 3.52e-22 | 86.3 |
Msa1447390 | AT5G65050.2 | 53.521 | 71 | 32 | 1 | 1 | 70 | 1 | 71 | 4.02e-21 | 82.4 |
Msa1447390 | AT5G65070.3 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 6.15e-21 | 83.2 |
Msa1447390 | AT5G65050.1 | 53.521 | 71 | 32 | 1 | 1 | 70 | 1 | 71 | 6.26e-21 | 82.0 |
Msa1447390 | AT5G65050.5 | 53.521 | 71 | 32 | 1 | 1 | 70 | 1 | 71 | 6.83e-21 | 82.0 |
Msa1447390 | AT5G65050.3 | 53.521 | 71 | 32 | 1 | 1 | 70 | 1 | 71 | 7.57e-21 | 82.0 |
Msa1447390 | AT5G65080.3 | 53.521 | 71 | 32 | 1 | 1 | 70 | 8 | 78 | 1.03e-19 | 79.0 |
Msa1447390 | AT5G65060.3 | 46.512 | 86 | 41 | 2 | 1 | 81 | 1 | 86 | 1.18e-19 | 79.0 |
Msa1447390 | AT5G65060.2 | 50.704 | 71 | 34 | 1 | 1 | 70 | 1 | 71 | 1.32e-19 | 78.6 |
Msa1447390 | AT5G65060.1 | 50.704 | 71 | 34 | 1 | 1 | 70 | 1 | 71 | 1.55e-19 | 78.6 |
Msa1447390 | AT1G01530.1 | 50.704 | 71 | 35 | 0 | 3 | 73 | 8 | 78 | 2.53e-19 | 79.0 |
Msa1447390 | AT4G36590.1 | 56.716 | 67 | 29 | 0 | 3 | 69 | 8 | 74 | 3.27e-19 | 79.0 |
Msa1447390 | AT1G31140.1 | 51.389 | 72 | 33 | 1 | 1 | 70 | 1 | 72 | 9.80e-19 | 77.0 |
Msa1447390 | AT1G31140.2 | 51.389 | 72 | 33 | 1 | 1 | 70 | 1 | 72 | 1.04e-18 | 77.0 |
Msa1447390 | AT5G65080.2 | 61.017 | 59 | 23 | 0 | 1 | 59 | 8 | 66 | 1.43e-18 | 76.3 |
Msa1447390 | AT1G77950.3 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.94e-18 | 77.0 |
Msa1447390 | AT1G77950.2 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.94e-18 | 77.0 |
Msa1447390 | AT1G77950.1 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.94e-18 | 77.0 |
Msa1447390 | AT1G77950.4 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.94e-18 | 77.0 |
Msa1447390 | AT1G77980.1 | 57.143 | 70 | 29 | 1 | 1 | 69 | 1 | 70 | 2.77e-18 | 77.4 |
Msa1447390 | AT1G22130.1 | 60.606 | 66 | 26 | 0 | 1 | 66 | 1 | 66 | 2.77e-18 | 77.4 |
Msa1447390 | AT4G37435.1 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 7.27e-18 | 73.9 |
Msa1447390 | AT1G77080.5 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 8.51e-18 | 73.6 |
Msa1447390 | AT1G77080.11 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 8.76e-18 | 73.6 |
Msa1447390 | AT2G24840.1 | 52.239 | 67 | 32 | 0 | 3 | 69 | 64 | 130 | 1.12e-17 | 75.1 |
Msa1447390 | AT1G77080.4 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 1.36e-17 | 73.6 |
Msa1447390 | AT1G77080.8 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 3.43e-17 | 73.2 |
Msa1447390 | AT1G65360.1 | 45.070 | 71 | 39 | 0 | 3 | 73 | 8 | 78 | 7.51e-17 | 72.4 |
Msa1447390 | AT2G34440.1 | 40.230 | 87 | 49 | 1 | 1 | 87 | 1 | 84 | 9.51e-17 | 70.9 |
Msa1447390 | AT5G60440.1 | 50.746 | 67 | 33 | 0 | 3 | 69 | 8 | 74 | 1.26e-16 | 72.8 |
Msa1447390 | AT3G66656.1 | 45.714 | 70 | 38 | 0 | 1 | 70 | 1 | 70 | 3.36e-16 | 69.7 |
Msa1447390 | AT1G18750.3 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 5.84e-16 | 71.2 |
Msa1447390 | AT1G18750.1 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 6.27e-16 | 71.2 |
Msa1447390 | AT1G18750.4 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 8.24e-16 | 70.9 |
Msa1447390 | AT1G77080.12 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 1.97e-15 | 67.0 |
Msa1447390 | AT3G04100.1 | 39.189 | 74 | 45 | 0 | 5 | 78 | 17 | 90 | 3.29e-15 | 67.8 |
Msa1447390 | AT2G03060.3 | 56.604 | 53 | 23 | 0 | 1 | 53 | 1 | 53 | 3.83e-15 | 68.9 |
Msa1447390 | AT2G03060.7 | 56.604 | 53 | 23 | 0 | 1 | 53 | 1 | 53 | 3.83e-15 | 68.9 |
Msa1447390 | AT2G03060.1 | 56.604 | 53 | 23 | 0 | 1 | 53 | 1 | 53 | 3.83e-15 | 68.9 |
Msa1447390 | AT2G03060.2 | 56.604 | 53 | 23 | 0 | 1 | 53 | 1 | 53 | 4.11e-15 | 68.9 |
Msa1447390 | AT1G77080.2 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 4.73e-15 | 67.0 |
Msa1447390 | AT1G72350.1 | 43.750 | 80 | 43 | 1 | 3 | 82 | 44 | 121 | 5.08e-15 | 67.4 |
Msa1447390 | AT1G29962.1 | 47.692 | 65 | 34 | 0 | 5 | 69 | 11 | 75 | 6.55e-15 | 66.2 |
Msa1447390 | AT1G28460.1 | 49.231 | 65 | 33 | 0 | 5 | 69 | 11 | 75 | 8.29e-15 | 66.2 |
Msa1447390 | AT1G47760.1 | 44.286 | 70 | 39 | 0 | 1 | 70 | 1 | 70 | 5.55e-14 | 63.9 |
Msa1447390 | AT1G28450.1 | 46.154 | 65 | 35 | 0 | 5 | 69 | 11 | 75 | 3.31e-13 | 62.0 |
Msa1447390 | AT1G69540.2 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 8.42e-12 | 59.7 |
Msa1447390 | AT2G26320.1 | 45.070 | 71 | 37 | 1 | 1 | 69 | 17 | 87 | 1.49e-11 | 56.2 |
Msa1447390 | AT1G69540.1 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 1.85e-11 | 58.5 |
Find 32 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGCTTATTATTCATCAAAA+TGG | 0.252811 | tig0031748:-6924 | Msa1447390:exon |
CTGACAAATAATTAATATTC+TGG | 0.288192 | tig0031748:+7095 | None:intergenic |
AAGAAATGGACTGCTTAAAA+AGG | 0.324915 | tig0031748:-6834 | Msa1447390:CDS |
CAGAATATTAATTATTTGTC+AGG | 0.350759 | tig0031748:-7094 | Msa1447390:intron |
AAGATAATACCTTGACATCT+AGG | 0.389908 | tig0031748:-7274 | None:intergenic |
ACTTTCTCAAAGAGAAGAAA+TGG | 0.422858 | tig0031748:-6848 | Msa1447390:CDS |
AAATTAAACATACCTTGAAC+TGG | 0.446342 | tig0031748:+6733 | None:intergenic |
CGAGATATGAACTCTCTTTG+AGG | 0.457521 | tig0031748:+6951 | None:intergenic |
TCTATGAGTTCTCCAGTTCA+AGG | 0.460917 | tig0031748:-6745 | Msa1447390:intron |
GAAACAGTGGAACGCTATCA+AGG | 0.469619 | tig0031748:-2593 | Msa1447390:CDS |
GGTAGGTTACATAGGGTGGA+TGG | 0.469866 | tig0031748:-7253 | Msa1447390:five_prime_UTR |
ACTCACTGCAATCAATCAAC+TGG | 0.471886 | tig0031748:-7227 | Msa1447390:five_prime_UTR |
CTCATCGTCTTCTCTACCAC+TGG | 0.481417 | tig0031748:-6773 | Msa1447390:CDS |
TCAAGGGAAAGTTAAGGAAC+TGG | 0.481701 | tig0031748:-2576 | Msa1447390:CDS |
GTAGGTTACATAGGGTGGAT+GGG | 0.503921 | tig0031748:-7252 | Msa1447390:five_prime_UTR |
GAGATATGAACTCTCTTTGA+GGG | 0.517551 | tig0031748:+6952 | None:intergenic |
AATATTCTGGAAGAAAAGAA+TGG | 0.523738 | tig0031748:+7108 | None:intergenic |
GACATCTAGGTAGGTTACAT+AGG | 0.523759 | tig0031748:-7261 | Msa1447390:five_prime_UTR |
TAGGTTACATAGGGTGGATG+GGG | 0.548295 | tig0031748:-7251 | Msa1447390:five_prime_UTR |
ACGCTATCAAGGGAAAGTTA+AGG | 0.569325 | tig0031748:-2582 | Msa1447390:CDS |
ACATCTAGGTAGGTTACATA+GGG | 0.570043 | tig0031748:-7260 | Msa1447390:five_prime_UTR |
TCTAGGTAGGTTACATAGGG+TGG | 0.600786 | tig0031748:-7257 | Msa1447390:five_prime_UTR |
TAATACCTTGACATCTAGGT+AGG | 0.603612 | tig0031748:-7270 | None:intergenic |
GAACTGGCTCTCAGCACCAA+AGG | 0.605749 | tig0031748:-2560 | Msa1447390:CDS |
ACAAAGCACTGAAAGTTCAA+AGG | 0.613392 | tig0031748:+6811 | None:intergenic |
AAACAGTGGAACGCTATCAA+GGG | 0.614255 | tig0031748:-2592 | Msa1447390:CDS |
TTATTCATCAAAATGGTGAG+AGG | 0.636658 | tig0031748:-6917 | Msa1447390:exon |
CTTCAGTATAAGCGAAACAG+TGG | 0.637167 | tig0031748:-2606 | Msa1447390:intron |
TCATCGTCTTCTCTACCACT+GGG | 0.652904 | tig0031748:-6772 | Msa1447390:CDS |
AGATATGAACTCTCTTTGAG+GGG | 0.683636 | tig0031748:+6953 | None:intergenic |
AGGAATCCAAGAAAATACAC+AGG | 0.687928 | tig0031748:-2540 | Msa1447390:CDS |
GAACTCATAGAGTTTCCCAG+TGG | 0.782754 | tig0031748:+6757 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTTTAATTTAAATT+TGG | - | tig0031748:5377-5396 | Msa1447390:intron | 0.0% |
!! | AAATAAAAATAAAACTGATT+TGG | - | tig0031748:3334-3353 | Msa1447390:intron | 10.0% |
!! | CAATTATAATATAAGTATAT+GGG | + | tig0031748:4052-4071 | None:intergenic | 10.0% |
!! | TCAATTATAATATAAGTATA+TGG | + | tig0031748:4053-4072 | None:intergenic | 10.0% |
!! | AAACAATATATTAAAATGTT+AGG | + | tig0031748:5627-5646 | None:intergenic | 10.0% |
!! | TTATATAATAAAAAAGATCA+AGG | - | tig0031748:6187-6206 | Msa1447390:intron | 10.0% |
!!! | ACTATATTTTTTTTTTTTTG+AGG | + | tig0031748:6366-6385 | None:intergenic | 10.0% |
!! | TTTGTTAAATACTATAAAAT+CGG | + | tig0031748:6406-6425 | None:intergenic | 10.0% |
!! | ATTATATTATAAACTAGAAT+TGG | + | tig0031748:6510-6529 | None:intergenic | 10.0% |
!! | CAAAAAATAAAATTTAACAT+TGG | + | tig0031748:6909-6928 | None:intergenic | 10.0% |
!!! | AATTATAATATTTTGGAAAG+AGG | + | tig0031748:4079-4098 | None:intergenic | 15.0% |
!! | TTAAAGTAATATCAAAATCT+TGG | - | tig0031748:4440-4459 | Msa1447390:intron | 15.0% |
!! | TAAAGTAATATCAAAATCTT+GGG | - | tig0031748:4441-4460 | Msa1447390:intron | 15.0% |
!! | CAGAATTATATATAATTTAC+CGG | + | tig0031748:4664-4683 | None:intergenic | 15.0% |
!! | AAAAAATAGTAGATTGTAAT+TGG | - | tig0031748:5400-5419 | Msa1447390:intron | 15.0% |
!! | AAAAATAGTAGATTGTAATT+GGG | - | tig0031748:5401-5420 | Msa1447390:intron | 15.0% |
!!! | TATATTTTAATATAGTCTTC+AGG | + | tig0031748:5751-5770 | None:intergenic | 15.0% |
!! | CTGACAAATAATTAATATTC+TGG | + | tig0031748:2704-2723 | None:intergenic | 20.0% |
!! | CAGAATATTAATTATTTGTC+AGG | - | tig0031748:2702-2721 | Msa1447390:intron | 20.0% |
!! | AAGAGTGAATAATTAACATA+AGG | - | tig0031748:3415-3434 | Msa1447390:intron | 20.0% |
!! | AGAGTGAATAATTAACATAA+GGG | - | tig0031748:3416-3435 | Msa1447390:intron | 20.0% |
!! | TAATTAACATAAGGGTTTAA+TGG | - | tig0031748:3424-3443 | Msa1447390:intron | 20.0% |
!! | GATTAAATATCTTGCTAATT+AGG | - | tig0031748:3517-3536 | Msa1447390:intron | 20.0% |
!!! | CTTTTCCTATTTTTAATTTG+TGG | - | tig0031748:3609-3628 | Msa1447390:intron | 20.0% |
!! | TGAATCCACAAATTAAAAAT+AGG | + | tig0031748:3617-3636 | None:intergenic | 20.0% |
!! | TTGTATCATATTCTAAACTT+TGG | + | tig0031748:3650-3669 | None:intergenic | 20.0% |
!!! | TTGAATCAAACTTTTAGTAT+AGG | - | tig0031748:3704-3723 | Msa1447390:intron | 20.0% |
!! | TAATATAAGTATATGGGTTT+AGG | + | tig0031748:4046-4065 | None:intergenic | 20.0% |
!!! | GGTTGTCAATTATAATATTT+TGG | + | tig0031748:4086-4105 | None:intergenic | 20.0% |
!! | TATTATAATTGACAACCAAT+TGG | - | tig0031748:4089-4108 | Msa1447390:intron | 20.0% |
!! | ATTATAATTGACAACCAATT+GGG | - | tig0031748:4090-4109 | Msa1447390:intron | 20.0% |
!! | AAAATAGTACTAGTAATATC+TGG | + | tig0031748:4159-4178 | None:intergenic | 20.0% |
!! | AAAAACTATTTAAACCAACA+AGG | + | tig0031748:4271-4290 | None:intergenic | 20.0% |
!! | AAAGTAATATCAAAATCTTG+GGG | - | tig0031748:4442-4461 | Msa1447390:intron | 20.0% |
!!! | AATAGTTCTAATATTCGATT+TGG | + | tig0031748:4802-4821 | None:intergenic | 20.0% |
!!! | ACATATTATCTAGTAACTTT+TGG | + | tig0031748:6058-6077 | None:intergenic | 20.0% |
!! | AAAAGTTACTAGATAATATG+TGG | - | tig0031748:6057-6076 | Msa1447390:intron | 20.0% |
!!! | TTTTTTTTTGAGGTAGATAT+TGG | + | tig0031748:6356-6375 | None:intergenic | 20.0% |
!! | AATGTGTAGAAAAATTATCT+AGG | - | tig0031748:6537-6556 | Msa1447390:intron | 20.0% |
!! | GTTTAAATTACTGAAATGTT+AGG | - | tig0031748:6567-6586 | Msa1447390:intron | 20.0% |
!!! | CCTATTTTTTTAAATAGTGA+AGG | + | tig0031748:6749-6768 | None:intergenic | 20.0% |
!! | CCTTCACTATTTAAAAAAAT+AGG | - | tig0031748:6746-6765 | Msa1447390:CDS | 20.0% |
!! | TATATTATTATGGATCAGTT+TGG | + | tig0031748:6980-6999 | None:intergenic | 20.0% |
!! | ATAATAGCAAAACTTTTGCT+AGG | - | tig0031748:2631-2650 | Msa1447390:intron | 25.0% |
!! | TAATAGCAAAACTTTTGCTA+GGG | - | tig0031748:2632-2651 | Msa1447390:intron | 25.0% |
!! | AATATTCTGGAAGAAAAGAA+TGG | + | tig0031748:2691-2710 | None:intergenic | 25.0% |
!! | TTGTTTTCCAAAATAGAAAG+TGG | + | tig0031748:2749-2768 | None:intergenic | 25.0% |
!! | TTTGGAAAACAACATAGTTT+TGG | - | tig0031748:2757-2776 | Msa1447390:intron | 25.0% |
! | GTGCTTATTATTCATCAAAA+TGG | - | tig0031748:2872-2891 | Msa1447390:intron | 25.0% |
! | AAATTAAACATACCTTGAAC+TGG | + | tig0031748:3066-3085 | None:intergenic | 25.0% |
!!! | TAATTTTGAGAACCCTTTTA+TGG | - | tig0031748:3194-3213 | Msa1447390:intron | 25.0% |
!! | CAATGATCTTTTCCATAAAA+GGG | + | tig0031748:3209-3228 | None:intergenic | 25.0% |
!! | TCAATGATCTTTTCCATAAA+AGG | + | tig0031748:3210-3229 | None:intergenic | 25.0% |
!!! | TTAATGGATTATAGCATCAA+AGG | - | tig0031748:3440-3459 | Msa1447390:intron | 25.0% |
!!! | TTAATGGATTATAGCATCAA+AGG | - | tig0031748:3440-3459 | Msa1447390:intron | 25.0% |
! | TAAATATCTTGCTAATTAGG+TGG | - | tig0031748:3520-3539 | Msa1447390:intron | 25.0% |
! | AAATATCTTGCTAATTAGGT+GGG | - | tig0031748:3521-3540 | Msa1447390:intron | 25.0% |
! | ATTATAACTGTACTTTCTAG+AGG | + | tig0031748:3827-3846 | None:intergenic | 25.0% |
!! | AATGCAGTTTTCTTGATTAT+AGG | - | tig0031748:3876-3895 | Msa1447390:intron | 25.0% |
! | CAAATGCAATACATGTATTA+TGG | + | tig0031748:3927-3946 | None:intergenic | 25.0% |
! | TGAATATGGGTTTAGATTTA+GGG | + | tig0031748:4016-4035 | None:intergenic | 25.0% |
! | TTAATCTAAAGAATCCCAAT+TGG | + | tig0031748:4107-4126 | None:intergenic | 25.0% |
!!! | CTTAAAGTTTTTTTTGGTAG+TGG | - | tig0031748:4338-4357 | Msa1447390:intron | 25.0% |
! | ACAAATGCATAAAATATGCA+AGG | + | tig0031748:4382-4401 | None:intergenic | 25.0% |
! | TTTGATATTACTTTAAGCGA+GGG | + | tig0031748:4436-4455 | None:intergenic | 25.0% |
!! | TTTTGATATTACTTTAAGCG+AGG | + | tig0031748:4437-4456 | None:intergenic | 25.0% |
! | TTATGCATTGAAAATATCCT+GGG | - | tig0031748:4465-4484 | Msa1447390:intron | 25.0% |
! | TTGTATTTGTCAAACAATTG+TGG | - | tig0031748:4499-4518 | Msa1447390:intron | 25.0% |
! | TAGTAGTTACATATAAGAAC+TGG | - | tig0031748:4536-4555 | Msa1447390:intron | 25.0% |
! | ACAAACCCATTATAAAAGTT+CGG | + | tig0031748:4620-4639 | None:intergenic | 25.0% |
! | TAAACCGAATTTAATTGAAC+CGG | - | tig0031748:4642-4661 | Msa1447390:intron | 25.0% |
!!! | TTTACCGGTTCAATTAAATT+CGG | + | tig0031748:4649-4668 | None:intergenic | 25.0% |
!! | ATACATTTTGCCTTATGTAA+AGG | + | tig0031748:4710-4729 | None:intergenic | 25.0% |
!!! | TTCTAATATTCGATTTGGTA+GGG | + | tig0031748:4797-4816 | None:intergenic | 25.0% |
!!! | TTGTCCAAGTTCAATTTTTT+CGG | - | tig0031748:4901-4920 | Msa1447390:intron | 25.0% |
!!! | GCTATTTGTTTTTGTAACTA+GGG | + | tig0031748:4967-4986 | None:intergenic | 25.0% |
!!! | TGCTATTTGTTTTTGTAACT+AGG | + | tig0031748:4968-4987 | None:intergenic | 25.0% |
!! | AGAAATACCTTTCTTTTGTT+TGG | - | tig0031748:5109-5128 | Msa1447390:intron | 25.0% |
!! | TGTTTGGATTGACTTATTTA+CGG | - | tig0031748:5125-5144 | Msa1447390:intron | 25.0% |
! | CAATTGTTTGTCAAACTATT+CGG | - | tig0031748:5151-5170 | Msa1447390:intron | 25.0% |
!!! | ATAAGTTGTTTTCGTAAACT+TGG | + | tig0031748:5177-5196 | None:intergenic | 25.0% |
!!! | TAAGTTCTTTTTAGTAGTAG+AGG | - | tig0031748:5205-5224 | Msa1447390:intron | 25.0% |
!! | AATCATGAGTTAACTACTTT+TGG | + | tig0031748:5559-5578 | None:intergenic | 25.0% |
!! | GTGTGAATAAGTTGAAAATT+AGG | - | tig0031748:5671-5690 | Msa1447390:intron | 25.0% |
! | ATAATATGTGGAGATTTAGT+AGG | - | tig0031748:6069-6088 | Msa1447390:intron | 25.0% |
!!! | TATGCCATAGACTTATTTTT+AGG | - | tig0031748:6228-6247 | Msa1447390:intron | 25.0% |
!! | TGTCAAACTTTTAATGATGT+TGG | + | tig0031748:6264-6283 | None:intergenic | 25.0% |
! | AATCGGATCTTAAATGATAT+TGG | + | tig0031748:6389-6408 | None:intergenic | 25.0% |
!! | AATGAGTTTTCTTAATGCAT+TGG | - | tig0031748:6808-6827 | Msa1447390:CDS | 25.0% |
!!! | TCTTAATGCATTGGTTAAAA+AGG | - | tig0031748:6817-6836 | Msa1447390:CDS | 25.0% |
! | TCCATAATAATATATGCTGA+TGG | - | tig0031748:6986-7005 | Msa1447390:five_prime_UTR | 25.0% |
! | CCATAATAATATATGCTGAT+GGG | - | tig0031748:6987-7006 | Msa1447390:five_prime_UTR | 25.0% |
!!! | AATCCTTTTAATTTGTAGCT+CGG | - | tig0031748:7027-7046 | Msa1447390:intron | 25.0% |
AAAAATAAGAAAGAGCAGAG+GGG | + | tig0031748:2603-2622 | None:intergenic | 30.0% | |
GAAAAATAAGAAAGAGCAGA+GGG | + | tig0031748:2604-2623 | None:intergenic | 30.0% | |
AGAAAAATAAGAAAGAGCAG+AGG | + | tig0031748:2605-2624 | None:intergenic | 30.0% | |
AATGAGATCTAGTTAACCAA+AGG | + | tig0031748:2798-2817 | None:intergenic | 30.0% | |
TTATTCATCAAAATGGTGAG+AGG | - | tig0031748:2879-2898 | Msa1447390:intron | 30.0% | |
! | ATTTTCGATGCGTTTCATTT+GGG | + | tig0031748:2910-2929 | None:intergenic | 30.0% |
ACTTTCTCAAAGAGAAGAAA+TGG | - | tig0031748:2948-2967 | Msa1447390:intron | 30.0% | |
!! | AAGAAATGGACTGCTTAAAA+AGG | - | tig0031748:2962-2981 | Msa1447390:intron | 30.0% |
GTATTGTGTACTTGATTACT+TGG | - | tig0031748:3140-3159 | Msa1447390:intron | 30.0% | |
! | GATTTTCACTGATGCTATAA+AGG | - | tig0031748:3271-3290 | Msa1447390:intron | 30.0% |
GGTTAAATATGCCAACTATA+AGG | - | tig0031748:3355-3374 | Msa1447390:intron | 30.0% | |
!!! | GTAACACTACAGTTTTAGTT+AGG | + | tig0031748:3393-3412 | None:intergenic | 30.0% |
! | TCAAAGGTGAGTGATTTTAA+TGG | - | tig0031748:3456-3475 | Msa1447390:intron | 30.0% |
! | TAATTTGTGGATTCAAGAAG+TGG | - | tig0031748:3622-3641 | Msa1447390:intron | 30.0% |
!!! | CTTTTTTTATGTCAAGTGTG+TGG | + | tig0031748:3757-3776 | None:intergenic | 30.0% |
CACACACTTGACATAAAAAA+AGG | - | tig0031748:3755-3774 | Msa1447390:intron | 30.0% | |
AAAAAAGGTAAATTTCCCCT+CGG | - | tig0031748:3770-3789 | Msa1447390:intron | 30.0% | |
ACAGTTATAATTCTGCTTGA+AGG | - | tig0031748:3836-3855 | Msa1447390:intron | 30.0% | |
GTGAATATGGGTTTAGATTT+AGG | + | tig0031748:4017-4036 | None:intergenic | 30.0% | |
! | TTTAGGTTTAGGGTGAATAT+GGG | + | tig0031748:4029-4048 | None:intergenic | 30.0% |
! | AGTATATGGGTTTAGGTTTA+GGG | + | tig0031748:4039-4058 | None:intergenic | 30.0% |
! | AAGTATATGGGTTTAGGTTT+AGG | + | tig0031748:4040-4059 | None:intergenic | 30.0% |
ATATCTGGTAAATCAAGAAC+TGG | + | tig0031748:4144-4163 | None:intergenic | 30.0% | |
TTGGAAAAAGTTAACCTTGT+TGG | - | tig0031748:4254-4273 | Msa1447390:intron | 30.0% | |
AAAAAAAACTTTAAGCGACG+GGG | + | tig0031748:4333-4352 | None:intergenic | 30.0% | |
CAAAAAAAACTTTAAGCGAC+GGG | + | tig0031748:4334-4353 | None:intergenic | 30.0% | |
CCAAAAAAAACTTTAAGCGA+CGG | + | tig0031748:4335-4354 | None:intergenic | 30.0% | |
ATGCATAAAATATGCAAGGT+CGG | + | tig0031748:4378-4397 | None:intergenic | 30.0% | |
TTGATATTACTTTAAGCGAG+GGG | + | tig0031748:4435-4454 | None:intergenic | 30.0% | |
GTTATGCATTGAAAATATCC+TGG | - | tig0031748:4464-4483 | Msa1447390:intron | 30.0% | |
TATGCATTGAAAATATCCTG+GGG | - | tig0031748:4466-4485 | Msa1447390:intron | 30.0% | |
TATTTGTCAAACAATTGTGG+AGG | - | tig0031748:4502-4521 | Msa1447390:intron | 30.0% | |
GTTACATATAAGAACTGGTT+CGG | - | tig0031748:4541-4560 | Msa1447390:intron | 30.0% | |
CAAACCCATTATAAAAGTTC+GGG | + | tig0031748:4619-4638 | None:intergenic | 30.0% | |
!! | GTTCTAATATTCGATTTGGT+AGG | + | tig0031748:4798-4817 | None:intergenic | 30.0% |
! | TGGACAAATAGTTTGTGAAT+TGG | + | tig0031748:4888-4907 | None:intergenic | 30.0% |
TCTACCGAAAAAATTGAACT+TGG | + | tig0031748:4908-4927 | None:intergenic | 30.0% | |
AAATATATGCATGTGAGTCA+TGG | + | tig0031748:5005-5024 | None:intergenic | 30.0% | |
ATGTCAATGCATGTTCAATT+AGG | - | tig0031748:5061-5080 | Msa1447390:intron | 30.0% | |
AGTCAATCCAAACAAAAGAA+AGG | + | tig0031748:5119-5138 | None:intergenic | 30.0% | |
!! | ATGAGTTAACTACTTTTGGT+CGG | + | tig0031748:5555-5574 | None:intergenic | 30.0% |
TCAACTTATTCACACCAAAA+GGG | + | tig0031748:5666-5685 | None:intergenic | 30.0% | |
TTCAACTTATTCACACCAAA+AGG | + | tig0031748:5667-5686 | None:intergenic | 30.0% | |
GGAACACATGTGATATATAT+CGG | + | tig0031748:5900-5919 | None:intergenic | 30.0% | |
! | AGCACTTTTCTCTAAACTAA+GGG | + | tig0031748:5921-5940 | None:intergenic | 30.0% |
! | AAGCACTTTTCTCTAAACTA+AGG | + | tig0031748:5922-5941 | None:intergenic | 30.0% |
CTTACCTAAATTGATCAAAC+CGG | - | tig0031748:6659-6678 | Msa1447390:intron | 30.0% | |
! | CAATAAATAGACTTTTCCGT+TGG | + | tig0031748:6685-6704 | None:intergenic | 30.0% |
CCCATCAGCATATATTATTA+TGG | + | tig0031748:6990-7009 | None:intergenic | 30.0% | |
TGAAGTATGCAACAAATGAA+TGG | + | tig0031748:7068-7087 | None:intergenic | 30.0% | |
!! | GATATACTTGTTATTGTCCA+TGG | - | tig0031748:7159-7178 | Msa1447390:five_prime_UTR | 30.0% |
! | TGTATTTTCTTGGATTCCTT+TGG | + | tig0031748:7255-7274 | None:intergenic | 30.0% |
ACATCTAGGTAGGTTACATA+GGG | - | tig0031748:2536-2555 | Msa1447390:CDS | 35.0% | |
! | TTCAGCACCACTTTCTATTT+TGG | - | tig0031748:2739-2758 | Msa1447390:intron | 35.0% |
AGATATGAACTCTCTTTGAG+GGG | + | tig0031748:2846-2865 | None:intergenic | 35.0% | |
GAGATATGAACTCTCTTTGA+GGG | + | tig0031748:2847-2866 | None:intergenic | 35.0% | |
! | CATTTTCGATGCGTTTCATT+TGG | + | tig0031748:2911-2930 | None:intergenic | 35.0% |
!! | ACAAAGCACTGAAAGTTCAA+AGG | + | tig0031748:2988-3007 | None:intergenic | 35.0% |
TTCACTGATGCTATAAAGGT+AGG | - | tig0031748:3275-3294 | Msa1447390:intron | 35.0% | |
GAAAGAAAATTTGACACGTG+TGG | + | tig0031748:3571-3590 | None:intergenic | 35.0% | |
AAAAAGGTAAATTTCCCCTC+GGG | - | tig0031748:3771-3790 | Msa1447390:intron | 35.0% | |
! | ATAATTCTGCTTGAAGGCAT+TGG | - | tig0031748:3842-3861 | Msa1447390:intron | 35.0% |
! | GTTTAGGTTTAGGGTGAATA+TGG | + | tig0031748:4030-4049 | None:intergenic | 35.0% |
! | AAGCATTGTTTCTCTTTCCT+CGG | - | tig0031748:4216-4235 | Msa1447390:intron | 35.0% |
!! | CAAGGTTAACTTTTTCCAAC+AGG | + | tig0031748:4253-4272 | None:intergenic | 35.0% |
AAAAAAACTTTAAGCGACGG+GGG | + | tig0031748:4332-4351 | None:intergenic | 35.0% | |
!!! | CCGTCGCTTAAAGTTTTTTT+TGG | - | tig0031748:4332-4351 | Msa1447390:intron | 35.0% |
!!! | AAGTTTTTTTTGGTAGTGGC+CGG | - | tig0031748:4342-4361 | Msa1447390:intron | 35.0% |
TGCATAAAATATGCAAGGTC+GGG | + | tig0031748:4377-4396 | None:intergenic | 35.0% | |
TGATATTACTTTAAGCGAGG+GGG | + | tig0031748:4434-4453 | None:intergenic | 35.0% | |
ATACAAAAAGAAAAGTCCCC+AGG | + | tig0031748:4485-4504 | None:intergenic | 35.0% | |
!! | ATATAAGAACTGGTTCGGTT+CGG | - | tig0031748:4546-4565 | Msa1447390:intron | 35.0% |
! | ACTGACCCGAACTTTTATAA+TGG | - | tig0031748:4611-4630 | Msa1447390:intron | 35.0% |
! | CTGACCCGAACTTTTATAAT+GGG | - | tig0031748:4612-4631 | Msa1447390:intron | 35.0% |
!! | ATGTAAAGGTAGTTCTGGTT+CGG | + | tig0031748:4696-4715 | None:intergenic | 35.0% |
ACCAGAACTACCTTTACATA+AGG | - | tig0031748:4697-4716 | Msa1447390:intron | 35.0% | |
TGAATTGGACTCAATCAGTT+AGG | + | tig0031748:4873-4892 | None:intergenic | 35.0% | |
GATAACTTTGTCTAGAGGAA+AGG | - | tig0031748:5528-5547 | Msa1447390:intron | 35.0% | |
! | TTTTGTCAATTCACCCCTTT+TGG | - | tig0031748:5649-5668 | Msa1447390:intron | 35.0% |
CAACTTATTCACACCAAAAG+GGG | + | tig0031748:5665-5684 | None:intergenic | 35.0% | |
ATTACGTTATGCAAGTGTCA+GGG | + | tig0031748:5705-5724 | None:intergenic | 35.0% | |
GCAGTTAAATTGAGACTTTG+TGG | - | tig0031748:5991-6010 | Msa1447390:intron | 35.0% | |
CGGACCTAAAAATAAGTCTA+TGG | + | tig0031748:6235-6254 | None:intergenic | 35.0% | |
TTTAATGATGTTGGACTCGT+CGG | + | tig0031748:6255-6274 | None:intergenic | 35.0% | |
!!! | ATGCTGATGGGTTTTTTGAA+AGG | - | tig0031748:6999-7018 | Msa1447390:intron | 35.0% |
!!! | TGCTGATGGGTTTTTTGAAA+GGG | - | tig0031748:7000-7019 | Msa1447390:intron | 35.0% |
CATCCGAGCTACAAATTAAA+AGG | + | tig0031748:7033-7052 | None:intergenic | 35.0% | |
!!! | CTTTTAATTTGTAGCTCGGA+TGG | - | tig0031748:7031-7050 | Msa1447390:intron | 35.0% |
!! | ATACTTGTTATTGTCCATGG+TGG | - | tig0031748:7162-7181 | Msa1447390:five_prime_UTR | 35.0% |
AGGAATCCAAGAAAATACAC+AGG | - | tig0031748:7256-7275 | Msa1447390:five_prime_UTR | 35.0% | |
GACATCTAGGTAGGTTACAT+AGG | - | tig0031748:2535-2554 | Msa1447390:CDS | 40.0% | |
ACTCACTGCAATCAATCAAC+TGG | - | tig0031748:2569-2588 | Msa1447390:CDS | 40.0% | |
ACCAAAGGTTAGAACACAAG+TGG | + | tig0031748:2783-2802 | None:intergenic | 40.0% | |
CGAGATATGAACTCTCTTTG+AGG | + | tig0031748:2848-2867 | None:intergenic | 40.0% | |
TCTATGAGTTCTCCAGTTCA+AGG | - | tig0031748:3051-3070 | Msa1447390:intron | 40.0% | |
! | TTGCTAATTAGGTGGGTTTG+AGG | - | tig0031748:3528-3547 | Msa1447390:intron | 40.0% |
ATGACAAATTTGAACCCGAG+GGG | + | tig0031748:3788-3807 | None:intergenic | 40.0% | |
CATGACAAATTTGAACCCGA+GGG | + | tig0031748:3789-3808 | None:intergenic | 40.0% | |
!!! | AGTTTTTTTTGGTAGTGGCC+GGG | - | tig0031748:4343-4362 | Msa1447390:intron | 40.0% |
GCATAAAATATGCAAGGTCG+GGG | + | tig0031748:4376-4395 | None:intergenic | 40.0% | |
!!! | CGGGTCAGTTTTTTTGATTG+TGG | + | tig0031748:4600-4619 | None:intergenic | 40.0% |
GCCTTATGTAAAGGTAGTTC+TGG | + | tig0031748:4701-4720 | None:intergenic | 40.0% | |
!! | CTTTTTAGTAGTAGAGGCAG+TGG | - | tig0031748:5211-5230 | Msa1447390:intron | 40.0% |
CCTCTAGACAAAGTTATCGT+AGG | + | tig0031748:5526-5545 | None:intergenic | 40.0% | |
CCTACGATAACTTTGTCTAG+AGG | - | tig0031748:5523-5542 | Msa1447390:intron | 40.0% | |
CATTACGTTATGCAAGTGTC+AGG | + | tig0031748:5706-5725 | None:intergenic | 40.0% | |
ATGTTGCACATGAAAAAGCG+TGG | - | tig0031748:5962-5981 | Msa1447390:intron | 40.0% | |
! | TGTTGCACATGAAAAAGCGT+GGG | - | tig0031748:5963-5982 | Msa1447390:intron | 40.0% |
TGTGGAGATTTAGTAGGTTG+AGG | - | tig0031748:6075-6094 | Msa1447390:intron | 40.0% | |
! | GTGGAGATTTAGTAGGTTGA+GGG | - | tig0031748:6076-6095 | Msa1447390:intron | 40.0% |
! | TGGAGATTTAGTAGGTTGAG+GGG | - | tig0031748:6077-6096 | Msa1447390:intron | 40.0% |
!! | TTGGCCGGTTTGATCAATTT+AGG | + | tig0031748:6666-6685 | None:intergenic | 40.0% |
AAATTGATCAAACCGGCCAA+CGG | - | tig0031748:6666-6685 | Msa1447390:intron | 40.0% | |
! | AAATAGACTTTTCCGTTGGC+CGG | + | tig0031748:6681-6700 | None:intergenic | 40.0% |
CTTCAGTATAAGCGAAACAG+TGG | - | tig0031748:7190-7209 | Msa1447390:five_prime_UTR | 40.0% | |
AAACAGTGGAACGCTATCAA+GGG | - | tig0031748:7204-7223 | Msa1447390:five_prime_UTR | 40.0% | |
ACGCTATCAAGGGAAAGTTA+AGG | - | tig0031748:7214-7233 | Msa1447390:five_prime_UTR | 40.0% | |
TCAAGGGAAAGTTAAGGAAC+TGG | - | tig0031748:7220-7239 | Msa1447390:five_prime_UTR | 40.0% | |
TCTAGGTAGGTTACATAGGG+TGG | - | tig0031748:2539-2558 | Msa1447390:CDS | 45.0% | |
GTAGGTTACATAGGGTGGAT+GGG | - | tig0031748:2544-2563 | Msa1447390:CDS | 45.0% | |
TAGGTTACATAGGGTGGATG+GGG | - | tig0031748:2545-2564 | Msa1447390:CDS | 45.0% | |
GCCACTTGTGTTCTAACCTT+TGG | - | tig0031748:2779-2798 | Msa1447390:intron | 45.0% | |
TCATCGTCTTCTCTACCACT+GGG | - | tig0031748:3024-3043 | Msa1447390:intron | 45.0% | |
GAACTCATAGAGTTTCCCAG+TGG | + | tig0031748:3042-3061 | None:intergenic | 45.0% | |
GATGCAGCAGACCTTATAGT+TGG | + | tig0031748:3369-3388 | None:intergenic | 45.0% | |
CCATGACAAATTTGAACCCG+AGG | + | tig0031748:3790-3809 | None:intergenic | 45.0% | |
CCTCGGGTTCAAATTTGTCA+TGG | - | tig0031748:3787-3806 | Msa1447390:intron | 45.0% | |
!!! | GTTTTTTTTGGTAGTGGCCG+GGG | - | tig0031748:4344-4363 | Msa1447390:intron | 45.0% |
GAGACTTTGTGGTGCAAACA+TGG | - | tig0031748:6002-6021 | Msa1447390:intron | 45.0% | |
TGGTGCATCACTTACACTTG+AGG | - | tig0031748:6022-6041 | Msa1447390:intron | 45.0% | |
GGTGCATCACTTACACTTGA+GGG | - | tig0031748:6023-6042 | Msa1447390:intron | 45.0% | |
GTGCATCACTTACACTTGAG+GGG | - | tig0031748:6024-6043 | Msa1447390:intron | 45.0% | |
TGCATCACTTACACTTGAGG+GGG | - | tig0031748:6025-6044 | Msa1447390:intron | 45.0% | |
! | GGAGATTTAGTAGGTTGAGG+GGG | - | tig0031748:6078-6097 | Msa1447390:intron | 45.0% |
ATCCAACCACCTCTACTCAT+GGG | + | tig0031748:6138-6157 | None:intergenic | 45.0% | |
! | ATACTGAAGCATCTCCACCA+TGG | + | tig0031748:7179-7198 | None:intergenic | 45.0% |
GAAACAGTGGAACGCTATCA+AGG | - | tig0031748:7203-7222 | Msa1447390:five_prime_UTR | 45.0% | |
!!! | AATAGTTTTTTTTTTTTTTT+TGG | - | tig0031748:4281-4300 | Msa1447390:intron | 5.0% |
!!! | ATAGTTTTTTTTTTTTTTTT+GGG | - | tig0031748:4282-4301 | Msa1447390:intron | 5.0% |
!! | TAAAAAAAAAATTATAGTTT+AGG | - | tig0031748:5463-5482 | Msa1447390:intron | 5.0% |
!! | AATATTTGAAAATTATAATA+TGG | + | tig0031748:5811-5830 | None:intergenic | 5.0% |
!!! | TTTTTATTATATAACAAAAT+TGG | + | tig0031748:6181-6200 | None:intergenic | 5.0% |
GGTAGGTTACATAGGGTGGA+TGG | - | tig0031748:2543-2562 | Msa1447390:CDS | 50.0% | |
CTCATCGTCTTCTCTACCAC+TGG | - | tig0031748:3023-3042 | Msa1447390:intron | 50.0% | |
GTGAGCTTAGCTCAGTTGGT+TGG | + | tig0031748:4406-4425 | None:intergenic | 50.0% | |
TCTCGTGAGCTTAGCTCAGT+TGG | + | tig0031748:4410-4429 | None:intergenic | 50.0% | |
GATCCAACCACCTCTACTCA+TGG | + | tig0031748:6139-6158 | None:intergenic | 50.0% | |
AGAGGTGGTTGGATCGAGTT+AGG | - | tig0031748:6144-6163 | Msa1447390:intron | 50.0% | |
AACAGGTTATGCTCGTGCCG+AGG | + | tig0031748:4236-4255 | None:intergenic | 55.0% | |
TCGGCACGAGCATAACCTGT+TGG | - | tig0031748:4235-4254 | Msa1447390:intron | 55.0% | |
GTTGCCAGGAACCTGGTTCA+GGG | - | tig0031748:5235-5254 | Msa1447390:intron | 55.0% | |
TTGCCAGGAACCTGGTTCAG+GGG | - | tig0031748:5236-5255 | Msa1447390:intron | 55.0% | |
AAGTGTGAACCCCCTGAACC+AGG | + | tig0031748:5249-5268 | None:intergenic | 55.0% | |
CAACCACCTCTACTCATGGG+CGG | + | tig0031748:6135-6154 | None:intergenic | 55.0% | |
! | GAACTGGCTCTCAGCACCAA+AGG | - | tig0031748:7236-7255 | Msa1447390:five_prime_UTR | 55.0% |
CAAGGTCGGGGTTCAAACCC+CGG | + | tig0031748:4364-4383 | None:intergenic | 60.0% | |
CGTTGCCAGGAACCTGGTTC+AGG | - | tig0031748:5234-5253 | Msa1447390:intron | 60.0% | |
TGCCAGGAACCTGGTTCAGG+GGG | - | tig0031748:5237-5256 | Msa1447390:intron | 60.0% | |
AACCCCCTGAACCAGGTTCC+TGG | + | tig0031748:5242-5261 | None:intergenic | 60.0% | |
CGCCCATGAGTAGAGGTGGT+TGG | - | tig0031748:6133-6152 | Msa1447390:intron | 60.0% | |
GTAGAGGCAGTGGCGTTGCC+AGG | - | tig0031748:5221-5240 | Msa1447390:intron | 65.0% | |
CAGTGGCGTTGCCAGGAACC+TGG | - | tig0031748:5228-5247 | Msa1447390:intron | 65.0% | |
! | GGAGGCACATGTGTGCCAGG+GGG | + | tig0031748:6114-6133 | None:intergenic | 65.0% |
! | CGGAGGCACATGTGTGCCAG+GGG | + | tig0031748:6115-6134 | None:intergenic | 65.0% |
! | GCGGAGGCACATGTGTGCCA+GGG | + | tig0031748:6116-6135 | None:intergenic | 65.0% |
GTGCCTCCGCCCATGAGTAG+AGG | - | tig0031748:6126-6145 | Msa1447390:intron | 65.0% | |
CCACCTCTACTCATGGGCGG+AGG | + | tig0031748:6132-6151 | None:intergenic | 65.0% | |
CCTCCGCCCATGAGTAGAGG+TGG | - | tig0031748:6129-6148 | Msa1447390:intron | 65.0% | |
GGGGGTTCAGCTCAACCCCC+TGG | - | tig0031748:6096-6115 | Msa1447390:intron | 70.0% | |
! | GGCGGAGGCACATGTGTGCC+AGG | + | tig0031748:6117-6136 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0031748 | gene | 2535 | 7283 | 2535 | ID=Msa1447390;Name=Msa1447390 |
tig0031748 | mRNA | 2535 | 7283 | 2535 | ID=Msa1447390-mRNA-1;Parent=Msa1447390;Name=Msa1447390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=270|1|1|1|0.5|0.33|3|0|90 |
tig0031748 | exon | 2535 | 2622 | 2535 | ID=Msa1447390-mRNA-1:exon:15896;Parent=Msa1447390-mRNA-1 |
tig0031748 | exon | 6746 | 7008 | 6746 | ID=Msa1447390-mRNA-1:exon:15895;Parent=Msa1447390-mRNA-1 |
tig0031748 | exon | 7095 | 7283 | 7095 | ID=Msa1447390-mRNA-1:exon:15894;Parent=Msa1447390-mRNA-1 |
tig0031748 | five_prime_UTR | 7095 | 7283 | 7095 | ID=Msa1447390-mRNA-1:five_prime_utr;Parent=Msa1447390-mRNA-1 |
tig0031748 | five_prime_UTR | 6928 | 7008 | 6928 | ID=Msa1447390-mRNA-1:five_prime_utr;Parent=Msa1447390-mRNA-1 |
tig0031748 | CDS | 6746 | 6927 | 6746 | ID=Msa1447390-mRNA-1:cds;Parent=Msa1447390-mRNA-1 |
tig0031748 | CDS | 2535 | 2622 | 2535 | ID=Msa1447390-mRNA-1:cds;Parent=Msa1447390-mRNA-1 |
Gene Sequence |
Protein sequence |