AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1447910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1447910 MtrunA17_Chr4g0072131 74.286 945 214 6 14 931 10 952 0.0 1416
Msa1447910 MtrunA17_Chr1g0148031 74.074 945 218 4 14 931 7 951 0.0 1395
Msa1447910 MtrunA17_Chr2g0298031 73.375 954 225 6 7 931 5 958 0.0 1385
Msa1447910 MtrunA17_Chr2g0333721 72.698 945 231 5 14 931 5 949 0.0 1384
Msa1447910 MtrunA17_Chr4g0059961 72.586 963 227 7 1 931 1 958 0.0 1379
Msa1447910 MtrunA17_Chr3g0138931 73.016 945 228 5 14 931 7 951 0.0 1378
Msa1447910 MtrunA17_Chr6g0452721 72.747 943 227 5 19 931 14 956 0.0 1371
Msa1447910 MtrunA17_Chr7g0276551 95.191 707 12 2 247 931 6 712 0.0 1364
Msa1447910 MtrunA17_Chr4g0065481 71.838 941 242 3 14 931 8 948 0.0 1358
Msa1447910 MtrunA17_Chr1g0147981 71.642 938 240 5 20 931 30 967 0.0 1343
Msa1447910 MtrunA17_Chr8g0365021 69.421 968 245 7 14 931 77 1043 0.0 1320
Msa1447910 MtrunA17_Chr2g0304941 72.789 882 217 3 14 872 8 889 0.0 1312
Msa1447910 MtrunA17_Chr8g0335291 69.231 962 248 7 14 931 9 966 0.0 1291
Msa1447910 MtrunA17_Chr7g0276541 90.262 267 12 2 1 255 1 265 1.39e-154 456
Msa1447910 MtrunA17_Chr8g0381711 26.113 674 416 17 34 642 22 678 2.80e-49 188
Msa1447910 MtrunA17_Chr1g0173111 25.219 686 424 18 40 642 131 810 4.33e-47 182
Msa1447910 MtrunA17_Chr4g0020551 24.352 694 422 20 41 642 66 748 1.71e-46 180
Msa1447910 MtrunA17_Chr5g0401211 25.175 715 436 23 19 642 107 813 1.16e-45 178
Msa1447910 MtrunA17_Chr8g0382071 24.747 691 423 21 40 642 132 813 2.70e-45 177
Msa1447910 MtrunA17_Chr4g0054021 24.856 696 417 21 37 642 57 736 2.99e-45 176
Msa1447910 MtrunA17_Chr8g0355421 24.441 716 419 22 41 655 126 820 3.96e-43 170
Msa1447910 MtrunA17_Chr3g0134771 24.128 688 409 18 50 642 146 815 3.37e-42 167
Msa1447910 MtrunA17_Chr4g0002331 24.515 722 412 22 34 642 177 878 1.24e-41 165
Msa1447910 MtrunA17_Chr7g0260401 24.861 720 432 22 28 642 127 842 1.77e-40 162
Msa1447910 MtrunA17_Chr2g0298871 24.552 725 414 22 31 642 161 865 1.30e-38 155
Msa1447910 MtrunA17_Chr6g0456201 22.802 728 436 23 28 642 95 809 2.49e-38 155
Msa1447910 MtrunA17_Chr8g0346461 30.769 351 200 10 40 349 32 380 1.10e-32 137
Msa1447910 MtrunA17_Chr8g0346461 29.932 294 142 10 404 642 505 789 2.72e-16 84.0
Msa1447910 MtrunA17_Chr7g0263361 29.235 366 211 12 33 352 36 399 6.58e-29 124
Msa1447910 MtrunA17_Chr7g0263361 32.168 286 148 13 488 735 626 903 3.49e-18 90.1
Msa1447910 MtrunA17_Chr1g0181471 75.714 70 16 1 452 521 21 89 5.48e-28 108
Msa1447910 MtrunA17_Chr5g0413881 64.935 77 26 1 397 472 6 82 1.06e-25 103
Msa1447910 MtrunA17_Chr3g0134951 29.167 336 186 11 431 715 510 844 4.94e-25 112
Msa1447910 MtrunA17_Chr3g0134951 27.624 362 222 10 28 355 9 364 6.67e-25 112
Msa1447910 MtrunA17_Chr2g0297051 23.784 555 338 18 134 650 461 968 2.89e-24 109
Msa1447910 MtrunA17_Chr5g0423831 59.459 74 30 0 397 470 55 128 1.63e-23 100
Msa1447910 MtrunA17_Chr6g0474841 56.757 74 32 0 397 470 55 128 3.17e-22 96.3
Msa1447910 MtrunA17_Chr8g0339181 24.299 535 309 21 151 649 431 905 4.47e-20 96.3
Msa1447910 MtrunA17_Chr4g0052521 22.744 554 340 20 134 646 424 930 1.35e-19 94.7
Msa1447910 MtrunA17_Chr8g0340261 25.926 297 175 8 386 642 70 361 3.03e-19 92.8
Msa1447910 MtrunA17_Chr4g0071991 22.812 640 406 22 70 676 106 690 3.96e-19 93.2
Msa1447910 MtrunA17_Chr4g0050431 23.519 540 332 13 133 641 366 855 2.55e-18 90.5
Msa1447910 MtrunA17_Chr8g0374391 33.735 166 89 4 488 650 35 182 1.88e-17 82.8
Msa1447910 MtrunA17_Chr8g0374331 33.735 166 89 4 488 650 42 189 2.43e-17 82.8
Msa1447910 MtrunA17_Chr2g0334231 25.449 334 210 9 45 348 180 504 1.50e-16 84.0
Msa1447910 MtrunA17_Chr8g0340271 20.896 335 225 10 46 345 118 447 1.63e-15 80.5
Msa1447910 MtrunA17_Chr5g0397621 33.129 163 88 5 490 649 695 839 5.05e-13 73.6
Msa1447910 MtrunA17_Chr2g0334221 25.738 237 126 7 404 598 106 334 4.61e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1447910 AT1G17260.1 77.836 952 180 4 4 931 3 947 0.0 1474
Msa1447910 AT3G42640.1 73.114 941 230 3 14 931 8 948 0.0 1391
Msa1447910 AT2G07560.1 72.611 942 234 3 14 931 8 949 0.0 1387
Msa1447910 AT3G47950.1 73.729 944 218 5 18 931 17 960 0.0 1386
Msa1447910 AT3G47950.2 73.729 944 218 5 18 931 17 960 0.0 1386
Msa1447910 AT5G62670.1 73.623 944 219 5 18 931 13 956 0.0 1385
Msa1447910 AT4G30190.1 73.679 946 219 6 14 931 5 948 0.0 1375
Msa1447910 AT2G18960.1 73.150 946 225 5 14 931 5 949 0.0 1369
Msa1447910 AT2G24520.2 71.323 945 244 4 14 931 50 994 0.0 1364
Msa1447910 AT1G80660.1 71.746 945 240 5 14 931 10 954 0.0 1363
Msa1447910 AT4G30190.2 71.195 979 219 6 14 931 5 981 0.0 1361
Msa1447910 AT5G57350.4 72.425 932 230 6 19 923 11 942 0.0 1353
Msa1447910 AT5G57350.2 72.425 932 230 6 19 923 11 942 0.0 1353
Msa1447910 AT5G57350.1 72.425 932 230 6 19 923 11 942 0.0 1353
Msa1447910 AT2G24520.3 71.643 931 237 4 28 931 1 931 0.0 1348
Msa1447910 AT2G24520.1 71.643 931 237 4 28 931 1 931 0.0 1348
Msa1447910 AT1G80660.4 72.319 914 226 5 14 900 10 923 0.0 1327
Msa1447910 AT1G80660.3 72.319 914 226 5 14 900 10 923 0.0 1326
Msa1447910 AT2G18960.3 74.379 886 198 5 74 931 1 885 0.0 1295
Msa1447910 AT2G18960.2 74.379 886 198 5 74 931 1 885 0.0 1295
Msa1447910 AT3G60330.2 68.432 944 255 6 19 923 13 952 0.0 1279
Msa1447910 AT3G60330.1 68.432 944 255 6 19 923 13 952 0.0 1279
Msa1447910 AT3G60330.4 68.220 944 257 6 19 923 13 952 0.0 1276
Msa1447910 AT3G60330.3 68.220 944 257 6 19 923 13 952 0.0 1276
Msa1447910 AT1G80660.2 71.758 825 206 5 134 931 1 825 0.0 1226
Msa1447910 AT5G57350.3 70.441 680 174 6 271 923 1 680 0.0 983
Msa1447910 AT2G24520.4 70.058 688 179 4 271 931 1 688 0.0 981
Msa1447910 AT4G11730.1 58.850 452 177 5 22 471 17 461 0.0 548
Msa1447910 AT4G11730.1 57.706 279 105 3 575 841 490 767 5.39e-93 312
Msa1447910 AT4G00900.2 26.490 906 465 31 28 746 14 905 1.85e-52 199
Msa1447910 AT4G00900.1 26.490 906 465 31 28 746 14 905 1.85e-52 199
Msa1447910 AT3G57330.2 25.072 690 414 22 40 642 76 749 4.99e-46 179
Msa1447910 AT3G57330.1 25.072 690 414 22 40 642 131 804 5.78e-46 179
Msa1447910 AT2G22950.1 25.751 699 418 23 35 642 126 814 8.77e-46 179
Msa1447910 AT4G37640.1 25.144 696 425 23 35 642 126 813 3.52e-44 174
Msa1447910 AT1G27770.3 24.898 735 429 27 13 642 37 753 2.24e-43 171
Msa1447910 AT1G27770.4 24.691 729 438 26 13 642 100 816 2.62e-43 171
Msa1447910 AT1G27770.1 24.691 729 438 26 13 642 100 816 2.62e-43 171
Msa1447910 AT3G22910.1 26.325 585 340 20 143 642 227 805 2.30e-42 168
Msa1447910 AT2G41560.2 26.006 696 403 27 40 642 29 705 3.73e-41 164
Msa1447910 AT2G41560.3 26.006 696 403 27 40 642 29 705 3.73e-41 164
Msa1447910 AT2G41560.4 26.006 696 403 27 40 642 29 705 3.73e-41 164
Msa1447910 AT2G41560.1 26.043 695 402 27 41 642 132 807 4.87e-41 164
Msa1447910 AT5G57110.1 24.148 704 434 19 34 642 145 843 1.74e-40 162
Msa1447910 AT5G57110.3 24.148 704 434 19 34 642 145 843 1.74e-40 162
Msa1447910 AT5G57110.2 24.148 704 434 19 34 642 145 843 1.74e-40 162
Msa1447910 AT4G29900.1 24.028 720 421 24 33 642 144 847 5.94e-38 154
Msa1447910 AT4G29900.2 24.028 720 421 24 33 642 144 847 5.94e-38 154
Msa1447910 AT3G63380.1 24.547 717 421 25 28 642 111 809 7.06e-37 150
Msa1447910 AT1G07810.1 29.888 358 202 12 40 352 44 397 1.05e-31 134
Msa1447910 AT1G07810.1 27.838 370 202 13 407 711 509 878 6.01e-18 90.1
Msa1447910 AT1G07670.2 29.124 388 222 14 10 352 18 397 1.72e-31 133
Msa1447910 AT1G07670.2 29.283 321 169 13 445 711 562 878 2.21e-18 91.3
Msa1447910 AT1G07670.1 29.124 388 222 14 10 352 18 397 1.72e-31 133
Msa1447910 AT1G07670.1 29.283 321 169 13 445 711 562 878 2.21e-18 91.3
Msa1447910 AT1G63440.1 24.912 566 357 18 108 649 412 933 1.83e-27 120
Msa1447910 AT3G21180.1 23.585 424 233 10 295 642 452 860 4.36e-27 119
Msa1447910 AT1G10130.1 29.970 337 181 13 431 715 510 843 2.28e-26 117
Msa1447910 AT1G10130.1 29.096 354 221 10 28 352 9 361 2.76e-25 113
Msa1447910 AT5G44790.1 23.560 573 337 19 120 644 418 937 9.69e-23 105
Msa1447910 AT1G27770.2 23.273 550 334 21 13 481 100 642 1.84e-21 101
Msa1447910 AT5G21930.2 23.518 506 320 14 160 639 354 818 1.02e-17 89.0
Msa1447910 AT5G21930.1 23.518 506 320 14 160 639 354 818 1.02e-17 89.0
Msa1447910 AT4G33520.3 23.104 567 361 15 102 640 344 863 2.41e-16 84.7
Msa1447910 AT5G21930.4 23.878 490 306 14 160 623 354 802 2.58e-16 84.3
Msa1447910 AT4G33520.2 23.104 567 361 15 102 640 344 863 2.84e-16 84.3
Msa1447910 AT5G21930.3 23.752 501 302 18 160 639 354 795 1.11e-14 79.3
Msa1447910 AT4G30110.1 22.259 301 209 6 67 344 99 397 1.03e-11 69.7
Msa1447910 AT4G30110.2 22.259 301 209 6 67 344 99 397 1.03e-11 69.7
Msa1447910 AT4G30120.1 21.262 301 212 6 67 344 105 403 2.28e-11 68.2

Find 233 sgRNAs with CRISPR-Local

Find 580 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCGTGGTTGGTCATTTC+TGG 0.096041 tig0031948:+16094 Msa1447910:CDS
GAAGCCCGACTTCACATATT+TGG 0.227491 tig0031948:+9313 Msa1447910:CDS
GTGATGTATTACCATCATTT+AGG 0.228823 tig0031948:-15551 None:intergenic
TTCCTCTCTTCGAGTTTGTT+TGG 0.256052 tig0031948:-9337 None:intergenic
TGGTTACTGTCCTCTTCTAC+TGG 0.257225 tig0031948:+15843 Msa1447910:CDS
CTGTTCTGGTGCTCCTTTGC+TGG 0.260353 tig0031948:-12895 None:intergenic
TCCTCTCTTCGAGTTTGTTT+GGG 0.263731 tig0031948:-9336 None:intergenic
GGCTATTTCAGCACGTCTTC+TGG 0.283031 tig0031948:-16718 None:intergenic
GGCTTTGCTGGTGTATTTCC+TGG 0.284059 tig0031948:+14457 Msa1447910:CDS
GCTTCCAACTGTCGGGTGTT+GGG 0.284788 tig0031948:-15772 None:intergenic
TGTAGGGATTATATGCTTAC+TGG 0.285416 tig0031948:+9680 Msa1447910:CDS
CTGTAGGTTCTTACCTCAAT+TGG 0.292745 tig0031948:+10625 Msa1447910:intron
TTTACATCTAAGAAAGACTA+TGG 0.304513 tig0031948:+16579 Msa1447910:CDS
AACCTTCTTGTTCTCCTGAT+TGG 0.304542 tig0031948:+10742 Msa1447910:CDS
GAATCCTCTTTCATGGGTTA+TGG 0.306246 tig0031948:+9507 Msa1447910:CDS
GGGCTGATTGGATTGCCTTC+AGG 0.310272 tig0031948:-16999 None:intergenic
TTCATGCAGTCAGCCCTTAC+TGG 0.310918 tig0031948:+10186 Msa1447910:intron
TCTTTACACTCTACCTCCTT+TGG 0.318416 tig0031948:-12677 None:intergenic
TACTAACCTTTCTGTCAAAT+AGG 0.323340 tig0031948:-16459 None:intergenic
GGGGATGGGCTGGTGTTATA+TGG 0.325597 tig0031948:+16353 Msa1447910:CDS
AGCAAAGTGGGTTCTTTCTC+AGG 0.334961 tig0031948:+16617 Msa1447910:CDS
GATTGGGACTTACCTTGCTT+TGG 0.341964 tig0031948:+15823 Msa1447910:CDS
TGCATTTGCTCAATAGCTAT+AGG 0.342464 tig0031948:+10655 Msa1447910:CDS
TTATGTGGAATCCTCTTTCA+TGG 0.355209 tig0031948:+9500 Msa1447910:CDS
GTACCCTTCTTCATCTTTGT+TGG 0.355822 tig0031948:+14375 Msa1447910:CDS
CCTGATTGGCAAGACTTTGT+AGG 0.357386 tig0031948:+9663 Msa1447910:CDS
TACCCTTCTTCATCTTTGTT+GGG 0.357990 tig0031948:+14376 Msa1447910:CDS
GCATTTGCTCAATAGCTATA+GGG 0.362334 tig0031948:+10656 Msa1447910:CDS
CCTACAAAGTCTTGCCAATC+AGG 0.363773 tig0031948:-9663 None:intergenic
CAACCGAGAGGGCATTGATT+TGG 0.364295 tig0031948:+9149 Msa1447910:CDS
GGCAGCTAGGGCAGCAAGAT+TGG 0.371214 tig0031948:+12607 Msa1447910:CDS
CATAGACAAATTTGCTGAAA+GGG 0.375332 tig0031948:+13241 Msa1447910:CDS
GGCAGCAAGATTGGAAAATC+AGG 0.377950 tig0031948:+12616 Msa1447910:CDS
GCTGATGCTCGCTTGCTTGA+AGG 0.379697 tig0031948:+9992 Msa1447910:CDS
AAGACTATGGGACGGAAGAT+AGG 0.380573 tig0031948:+16592 Msa1447910:CDS
GTTTGTGTTAAGATGATTAC+AGG 0.381731 tig0031948:+14054 Msa1447910:CDS
CAGCATGGCTGAGGAGGAAC+TGG 0.385684 tig0031948:+9098 None:intergenic
AATGACAGCAATTGAAGAAA+TGG 0.386349 tig0031948:+11165 Msa1447910:CDS
GAAGCTGTAGTGATAGCAAC+AGG 0.394081 tig0031948:+10282 Msa1447910:CDS
TGCCGTGGAATCAGACTGTA+TGG 0.400187 tig0031948:-17020 None:intergenic
GAAAAGGCAGATGGCTTTGC+TGG 0.400571 tig0031948:+14445 Msa1447910:CDS
CAAAGATATGATTGTTCTAC+TGG 0.403426 tig0031948:+12586 Msa1447910:CDS
TACTGCTGCAGCAGCACTAA+TGG 0.404355 tig0031948:+9746 Msa1447910:CDS
TTTGCTAAAATTCGAGGGAT+TGG 0.405266 tig0031948:+16328 Msa1447910:CDS
CCCTCTCGGTTGAAATTGTC+AGG 0.406371 tig0031948:-9138 None:intergenic
GTCTTCTATGATAGCTGAAC+AGG 0.406949 tig0031948:+16695 Msa1447910:CDS
TACCAGCTGAGCTATTATAA+AGG 0.408641 tig0031948:-16144 None:intergenic
ATCCCATCGCCTTTCTCAGC+AGG 0.413226 tig0031948:+10816 Msa1447910:CDS
AGCTTCCAACTGTCGGGTGT+TGG 0.416456 tig0031948:-15773 None:intergenic
TTGTTCTCCTAGCATCAATC+TGG 0.417866 tig0031948:+15487 Msa1447910:CDS
TTTGCAACAGGAGTAGTGAT+TGG 0.419658 tig0031948:+15806 Msa1447910:CDS
TATGGAAGCAGCAGCATTGA+TGG 0.422691 tig0031948:+9525 Msa1447910:CDS
TGGAAATCGTGTCTTTGTCT+TGG 0.427550 tig0031948:-13202 None:intergenic
TGTCCGCTTTCTTCAATGCC+GGG 0.430432 tig0031948:-14955 None:intergenic
TGAAGTTTCTTAGCTTTATG+TGG 0.431058 tig0031948:+9485 Msa1447910:CDS
CTGATTGGCAAGACTTTGTA+GGG 0.431130 tig0031948:+9664 Msa1447910:CDS
CTTCTTGTTCTCCTGATTGG+AGG 0.437743 tig0031948:+10745 Msa1447910:CDS
TTTAATCTTCTATGTACCCT+TGG 0.443997 tig0031948:+16384 Msa1447910:CDS
AGTCGAGACCACTTTCTTTG+AGG 0.446301 tig0031948:+15871 Msa1447910:CDS
CGTTTGCCTACGGGATTGAA+TGG 0.446785 tig0031948:-12828 None:intergenic
CTGTGGAGCACCGTTCATAC+AGG 0.447399 tig0031948:+10707 Msa1447910:CDS
CGCCTTTATAATAGCTCAGC+TGG 0.451760 tig0031948:+16142 Msa1447910:CDS
CCTTACTCTGTCTTTAGCTA+TGG 0.453105 tig0031948:-15744 None:intergenic
CTATGGGAATTCCTCCAATC+AGG 0.454507 tig0031948:-10756 None:intergenic
GGGATTGGATGGGGATGGGC+TGG 0.455423 tig0031948:+16343 Msa1447910:CDS
ATCAGACTGTATGGGCTGAT+TGG 0.456214 tig0031948:-17011 None:intergenic
CAACATGTTGTTGGAATGAC+TGG 0.457877 tig0031948:+14914 Msa1447910:CDS
TCAAGCAAGCGAGCATCAGC+TGG 0.459867 tig0031948:-9989 None:intergenic
TATGTGGAATCCTCTTTCAT+GGG 0.464732 tig0031948:+9501 Msa1447910:CDS
ATGTCCGCTTTCTTCAATGC+CGG 0.466844 tig0031948:-14956 None:intergenic
GTTGACAGTACCGAAGTTGT+TGG 0.466859 tig0031948:+10339 Msa1447910:CDS
ATTAACGATGGCAGCATCAA+TGG 0.468429 tig0031948:-12642 None:intergenic
CTAAAATTCGAGGGATTGGA+TGG 0.471067 tig0031948:+16332 Msa1447910:CDS
TTCAGGAGGACGGTCCTGAT+TGG 0.472690 tig0031948:+9649 Msa1447910:intron
CGGAAGATAGGGCAGCAAAG+TGG 0.473202 tig0031948:+16604 Msa1447910:CDS
TTGCAACAGGAGTAGTGATT+GGG 0.474652 tig0031948:+15807 Msa1447910:CDS
CAACTGTCGGGTGTTGGGGA+TGG 0.474893 tig0031948:-15767 None:intergenic
CAGCAAAGGAGCACCAGAAC+AGG 0.478886 tig0031948:+12896 Msa1447910:CDS
CTGCCTGAGATATTTGCAAC+AGG 0.479505 tig0031948:+15794 Msa1447910:CDS
ATTTGCATAAACTGCAATCA+AGG 0.479923 tig0031948:-16299 None:intergenic
GAATCAGATGACCTCAGGCT+TGG 0.482429 tig0031948:+16656 Msa1447910:CDS
TGTCCTATGCAGTGACAAAA+CGG 0.483383 tig0031948:+11198 Msa1447910:CDS
TAATACTGTTGGCATAGCTA+TGG 0.485377 tig0031948:-10773 None:intergenic
TCAGATGACCTCAGGCTTGG+AGG 0.486477 tig0031948:+16659 Msa1447910:CDS
CTTCCAACTGTCGGGTGTTG+GGG 0.488437 tig0031948:-15771 None:intergenic
AGGATAGCCCTGGAGGTCCT+TGG 0.488511 tig0031948:+13950 Msa1447910:CDS
CACCAAGGTTAAGTGCTCTT+CGG 0.495508 tig0031948:-14032 None:intergenic
TGGGCCAAATATGTGAAGTC+GGG 0.495530 tig0031948:-9317 None:intergenic
ACTTGCAAACCTGCTGAGAA+AGG 0.498739 tig0031948:-10825 None:intergenic
GTCTCAGCACTATCGTGTCT+TGG 0.499266 tig0031948:-14006 None:intergenic
CAGGTAGGGACTCTCCAGTA+AGG 0.499646 tig0031948:-10200 None:intergenic
GATATAGTCTTAACTGAGCC+TGG 0.499821 tig0031948:+15025 Msa1447910:CDS
CACTAGATAAGGTGGTTACA+TGG 0.500874 tig0031948:-15998 None:intergenic
ATCATTGCAATCCTAAATGA+TGG 0.501109 tig0031948:+15540 Msa1447910:CDS
TTGTTACTCGCAGCCGTGGT+TGG 0.501483 tig0031948:+16084 Msa1447910:CDS
ACTCCTGTTGCAAATATCTC+AGG 0.502828 tig0031948:-15797 None:intergenic
TTTCTCACTGTCACTAGATA+AGG 0.503058 tig0031948:-16009 None:intergenic
GTCCTATGCAGTGACAAAAC+GGG 0.503849 tig0031948:+11199 Msa1447910:CDS
AATGCAGAAGTTACCAATTG+AGG 0.505298 tig0031948:-10638 None:intergenic
CTCAGGCAGCTTCCAACTGT+CGG 0.508104 tig0031948:-15780 None:intergenic
GGTTACTGTCCTCTTCTACT+GGG 0.509540 tig0031948:+15844 Msa1447910:CDS
AAGGAGACGGGCAGAAGACT+TGG 0.511791 tig0031948:+14337 Msa1447910:CDS
CAAAACGTCCAAGGACCTCC+AGG 0.512584 tig0031948:-13958 None:intergenic
TGGTCATTTCTGGAGAGACC+TGG 0.513976 tig0031948:+16104 Msa1447910:CDS
GAATCTCCTATTTGACAGAA+AGG 0.514636 tig0031948:+16453 Msa1447910:CDS
TTTATAGAAGAAAATAATGC+TGG 0.514808 tig0031948:+9723 Msa1447910:CDS
CCATAGCTAAAGACAGAGTA+AGG 0.516210 tig0031948:+15744 Msa1447910:CDS
TCAGGCAGCTTCCAACTGTC+GGG 0.517739 tig0031948:-15779 None:intergenic
TTATCTGTAACACTTGCCAT+TGG 0.519010 tig0031948:+10793 Msa1447910:CDS
AGACTATGGGACGGAAGATA+GGG 0.519978 tig0031948:+16593 Msa1447910:CDS
ATAGCTGTACGTTTGCCTAC+GGG 0.520232 tig0031948:-12837 None:intergenic
GACGGGCAGAAGACTTGGCA+TGG 0.520730 tig0031948:+14342 Msa1447910:CDS
GGAAGATAGGGCAGCAAAGT+GGG 0.521222 tig0031948:+16605 Msa1447910:CDS
TCATCCTTTGAAATATAGCT+CGG 0.523752 tig0031948:-15081 None:intergenic
ATCATTCAGGTTCTAAGAGA+TGG 0.525338 tig0031948:+9893 Msa1447910:intron
AGGAAGGTCACCTTTGTTCG+AGG 0.525933 tig0031948:-9780 None:intergenic
TGATTGTTCTACTGGCAGCT+AGG 0.528322 tig0031948:+12594 Msa1447910:CDS
CGACCCAACAAAGATGAAGA+AGG 0.529136 tig0031948:-14379 None:intergenic
AGTAGACGAGCTCATTGAAA+AGG 0.529173 tig0031948:+14429 Msa1447910:CDS
TTCGAGGGATTGGATGGGGA+TGG 0.532366 tig0031948:+16338 Msa1447910:CDS
ATAAGGTGGTTACATGGAAG+TGG 0.532602 tig0031948:-15992 None:intergenic
TTTCAATGAGCTCGTCTACT+GGG 0.533521 tig0031948:-14426 None:intergenic
TCGAGGGATTGGATGGGGAT+GGG 0.535636 tig0031948:+16339 Msa1447910:CDS
GCAAGTTAGCATCATTAGCC+AGG 0.537663 tig0031948:+16052 Msa1447910:CDS
GGACTGAATCAGATGACCTC+AGG 0.540862 tig0031948:+16651 Msa1447910:CDS
TTGGCTATTGCAAAGGAGAC+GGG 0.540909 tig0031948:+14325 Msa1447910:CDS
TATAGCTGTACGTTTGCCTA+CGG 0.541276 tig0031948:-12838 None:intergenic
CTGAAAATGTCCAACAACTT+CGG 0.545009 tig0031948:-10349 None:intergenic
AAGGGGATTGCGATCTCTTG+CGG 0.545527 tig0031948:+13259 Msa1447910:CDS
CTTTCTCAGGGAAGTCTGCA+AGG 0.545803 tig0031948:+16630 Msa1447910:CDS
TCATAGACAAATTTGCTGAA+AGG 0.545831 tig0031948:+13240 Msa1447910:CDS
TACTGACTCCGCCATTGGCA+AGG 0.546222 tig0031948:-9555 None:intergenic
CGACTACTGCCCAGTAGAAG+AGG 0.548192 tig0031948:-15853 None:intergenic
AACTGTAAACAGCATGGCTG+AGG 0.549645 tig0031948:+9089 None:intergenic
GATTGTTCTACTGGCAGCTA+GGG 0.551991 tig0031948:+12595 Msa1447910:CDS
GCTTCCATAACCCATGAAAG+AGG 0.552174 tig0031948:-9511 None:intergenic
TCAGCACTATCGTGTCTTGG+TGG 0.553582 tig0031948:-14003 None:intergenic
AATACTGTTGGCATAGCTAT+GGG 0.554704 tig0031948:-10772 None:intergenic
AAACCTGCTGAGAAAGGCGA+TGG 0.555520 tig0031948:-10819 None:intergenic
GATATAATCAGCATAAAGCT+AGG 0.555862 tig0031948:+9956 Msa1447910:CDS
TAAGATTCCGATCAACAGAC+AGG 0.558822 tig0031948:-11240 None:intergenic
TTGGGCCAAATATGTGAAGT+CGG 0.561446 tig0031948:-9318 None:intergenic
CTAACAAATTAAGACTTGCC+TGG 0.562853 tig0031948:-10033 None:intergenic
GCATTGAAGAAAGCGGACAT+TGG 0.563066 tig0031948:+14959 Msa1447910:CDS
TGTTGATCGGAATCTTATAG+AGG 0.563533 tig0031948:+11246 Msa1447910:CDS
TGTCAATGCAGGGGATCAGT+TGG 0.563700 tig0031948:+14306 Msa1447910:intron
TGTAAACAGCATGGCTGAGG+AGG 0.563755 tig0031948:+9092 None:intergenic
CAGGCTTGGAGGTCAGTGGA+AGG 0.563912 tig0031948:+16670 Msa1447910:CDS
GTCCGCTTTCTTCAATGCCG+GGG 0.564160 tig0031948:-14954 None:intergenic
ATAGACAAATTTGCTGAAAG+GGG 0.564245 tig0031948:+13242 Msa1447910:CDS
ATTCCATGCTTCTCCACTCA+AGG 0.566593 tig0031948:-16434 None:intergenic
CTAGCCGAGCTATATTTCAA+AGG 0.569000 tig0031948:+15077 Msa1447910:CDS
ATGGCAATTGTCCTTGCCAA+TGG 0.570195 tig0031948:+9544 Msa1447910:CDS
GAAGACGTGCTGAAATAGCC+AGG 0.570776 tig0031948:+16721 Msa1447910:CDS
TCGCTTAGCTCCTCGAACAA+AGG 0.571346 tig0031948:+9770 Msa1447910:CDS
CATCCCCAACACCCGACAGT+TGG 0.572161 tig0031948:+15768 Msa1447910:CDS
AGTTCGAAAACTTGTTCTAG+TGG 0.573480 tig0031948:-9250 None:intergenic
AATTGAAGAAATGGCAGGCA+TGG 0.573828 tig0031948:+11174 Msa1447910:CDS
CTCACTGTCACTAGATAAGG+TGG 0.574143 tig0031948:-16006 None:intergenic
GCAATGATCAAGACCATGAA+GGG 0.574518 tig0031948:-15525 None:intergenic
GTTGGCTATTGCAAAGGAGA+CGG 0.576764 tig0031948:+14324 Msa1447910:CDS
TGCAATGATCAAGACCATGA+AGG 0.579382 tig0031948:-15526 None:intergenic
TTACCAAATCAATGCCCTCT+CGG 0.579444 tig0031948:-9152 None:intergenic
CTGATAATAACACTTAAGCC+AGG 0.581000 tig0031948:-15043 None:intergenic
AAGTCGGGCTTCAGCATCGT+CGG 0.581853 tig0031948:-9302 None:intergenic
TTACATCTAAGAAAGACTAT+GGG 0.582553 tig0031948:+16580 Msa1447910:CDS
TAATATGCTCGCTGATCCAA+AGG 0.583371 tig0031948:+12661 Msa1447910:CDS
ACCTCAGGCTTGGAGGTCAG+TGG 0.583749 tig0031948:+16666 Msa1447910:CDS
AAAATTCGAGGGATTGGATG+GGG 0.584108 tig0031948:+16334 Msa1447910:CDS
AACAAACCACAAAACGTCCA+AGG 0.585464 tig0031948:-13967 None:intergenic
ACGGGCAGAAGACTTGGCAT+GGG 0.585500 tig0031948:+14343 Msa1447910:CDS
GCAAAGTGGGTTCTTTCTCA+GGG 0.586009 tig0031948:+16618 Msa1447910:CDS
TTTCTACCATTCAATCCCGT+AGG 0.590158 tig0031948:+12822 Msa1447910:CDS
ACAGCAATTGAAGAAATGGC+AGG 0.590943 tig0031948:+11169 Msa1447910:CDS
TTTATGCTGATTATATCCCC+AGG 0.591558 tig0031948:-9950 None:intergenic
AAGGTTAAGTGCTCTTCGGA+TGG 0.593471 tig0031948:-14028 None:intergenic
TTAATCGCCTGTCTGTTGAT+CGG 0.595090 tig0031948:+11233 Msa1447910:CDS
AGTGTTACAGATAATACTGT+TGG 0.595416 tig0031948:-10784 None:intergenic
AGATGGAGTAAATGATGCCC+CGG 0.597818 tig0031948:+14937 Msa1447910:CDS
AAATTGTCAGGATCAAGCAA+AGG 0.599259 tig0031948:-9126 None:intergenic
CGGGCTTCAGCATCGTCGGA+TGG 0.599719 tig0031948:-9298 None:intergenic
ATAACATACATCGATTCTGA+TGG 0.603186 tig0031948:+12858 Msa1447910:CDS
CATACTTCCAGATTGATGCT+AGG 0.611446 tig0031948:-15494 None:intergenic
TCCACTGACCTCCAAGCCTG+AGG 0.614539 tig0031948:-16667 None:intergenic
GAGCTCATTGAAAAGGCAGA+TGG 0.614679 tig0031948:+14436 Msa1447910:CDS
CTCCAATCAGGAGAACAAGA+AGG 0.615699 tig0031948:-10744 None:intergenic
AGACCCTCTCAAAATTGACC+AGG 0.616288 tig0031948:+10015 Msa1447910:CDS
ATGCCTTGAGTGGAGAAGCA+TGG 0.616893 tig0031948:+16431 Msa1447910:CDS
TAAAATTCGAGGGATTGGAT+GGG 0.617458 tig0031948:+16333 Msa1447910:CDS
AGAAAGGCGATGGGATCCAA+TGG 0.617482 tig0031948:-10809 None:intergenic
ATCCGAAGAGCACTTAACCT+TGG 0.618518 tig0031948:+14030 Msa1447910:CDS
AGGTAGGGACTCTCCAGTAA+GGG 0.619072 tig0031948:-10199 None:intergenic
TAAGGTGGTTACATGGAAGT+GGG 0.620491 tig0031948:-15991 None:intergenic
TCGTCGGATGGAAGTCCTCT+CGG 0.621958 tig0031948:-9286 None:intergenic
TGTGGAGCACCGTTCATACA+GGG 0.623608 tig0031948:+10708 Msa1447910:CDS
AGAGGACAGTAACCAAAGCA+AGG 0.625127 tig0031948:-15835 None:intergenic
TCAGGTTCAACGTGTAAACA+CGG 0.625953 tig0031948:+10252 Msa1447910:CDS
GGATCAGTTGGCTATTGCAA+AGG 0.627310 tig0031948:+14318 Msa1447910:CDS
TATATCAGCAGCACTTCTTG+CGG 0.629334 tig0031948:-15008 None:intergenic
AATAATTATAATGTTCCCTG+TGG 0.629353 tig0031948:+10690 Msa1447910:CDS
GCAATTGTCCTTGCCAATGG+CGG 0.629900 tig0031948:+9547 Msa1447910:CDS
GAGCACCGTTCATACAGGGA+TGG 0.630587 tig0031948:+10712 Msa1447910:CDS
ACAGTGCGCTATGCCTTGAG+TGG 0.630906 tig0031948:+16421 Msa1447910:CDS
TAAAATGCATTGCAGGCTGG+GGG 0.632518 tig0031948:+16921 Msa1447910:intron
CCTGACAATTTCAACCGAGA+GGG 0.634254 tig0031948:+9138 Msa1447910:CDS
GTTGTTGGAATGACTGGAGA+TGG 0.637791 tig0031948:+14920 Msa1447910:CDS
TGTATGAACGGTGCTCCACA+GGG 0.637944 tig0031948:-10705 None:intergenic
GCCCAAACAAACTCGAAGAG+AGG 0.639049 tig0031948:+9335 Msa1447910:CDS
GACCCAACAAAGATGAAGAA+GGG 0.639572 tig0031948:-14378 None:intergenic
GCTTGGAGGTCAGTGGAAGG+CGG 0.640034 tig0031948:+16673 Msa1447910:CDS
AACCTGCTGAGAAAGGCGAT+GGG 0.640702 tig0031948:-10818 None:intergenic
ATCTAAGAAAGACTATGGGA+CGG 0.645692 tig0031948:+16584 Msa1447910:CDS
TGCCCCGGCATTGAAGAAAG+CGG 0.645882 tig0031948:+14952 Msa1447910:CDS
TGTCTTGGTGGATCAAACAA+AGG 0.646683 tig0031948:-13991 None:intergenic
ATGATCAAGACCATGAAGGG+TGG 0.647055 tig0031948:-15522 None:intergenic
TGATTCCATCCCTGTATGAA+CGG 0.647538 tig0031948:-10717 None:intergenic
TTCAGGTTCTAAGAGATGGT+CGG 0.650146 tig0031948:+9897 Msa1447910:intron
TCCTGACAATTTCAACCGAG+AGG 0.652345 tig0031948:+9137 Msa1447910:CDS
TGTGAACTTGATGATGTCCA+AGG 0.652694 tig0031948:-16401 None:intergenic
AAATCAAAGGATAGCCCTGG+AGG 0.669524 tig0031948:+13943 Msa1447910:CDS
AAAACGTCCAAGGACCTCCA+GGG 0.674370 tig0031948:-13957 None:intergenic
TCTCCAGAAATGACCAACCA+CGG 0.675256 tig0031948:-16097 None:intergenic
TGCATAAACTGCAATCAAGG+TGG 0.677896 tig0031948:-16296 None:intergenic
GGGGAGTTGCACACACTCAG+AGG 0.678337 tig0031948:+16940 Msa1447910:CDS
AGGTTCTAAGAGATGGTCGG+TGG 0.681715 tig0031948:+9900 Msa1447910:intron
ATCAGCGAGCATATTAACGA+TGG 0.681924 tig0031948:-12654 None:intergenic
CGGGCAGAAGACTTGGCATG+GGG 0.684168 tig0031948:+14344 Msa1447910:CDS
TATGCTCGCTGATCCAAAGG+AGG 0.695015 tig0031948:+12664 Msa1447910:CDS
GCCGTGGAATCAGACTGTAT+GGG 0.695054 tig0031948:-17019 None:intergenic
AAGCTGTAGTGATAGCAACA+GGG 0.709944 tig0031948:+10283 Msa1447910:CDS
TCATCTTAACACAAACACCA+AGG 0.712463 tig0031948:-14047 None:intergenic
GTGAACTTGATGATGTCCAA+GGG 0.719416 tig0031948:-16400 None:intergenic
CTGTTGAAAACATCACCGAG+AGG 0.767804 tig0031948:+9271 Msa1447910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTGTTTAAGAAAAA+TGG + tig0031948:11633-11652 Msa1447910:intron 10.0%
!!! TATTTTTCTTTTCTAAATTA+AGG + tig0031948:13483-13502 Msa1447910:intron 10.0%
!! TATTTATTATTCTGATATAA+TGG - tig0031948:14559-14578 None:intergenic 10.0%
!! AATAAAAACGAAAATCAAAT+GGG - tig0031948:11333-11352 None:intergenic 15.0%
!! AAATAAAAACGAAAATCAAA+TGG - tig0031948:11334-11353 None:intergenic 15.0%
!! AACAAATAAAAGAAAGTAAT+AGG - tig0031948:11624-11643 None:intergenic 15.0%
!! AACAAATAAAAGAAAGTAAT+AGG - tig0031948:11624-11643 None:intergenic 15.0%
!!! TTTTTACAAGTAAATTTTTC+AGG - tig0031948:12543-12562 None:intergenic 15.0%
!! AAAAATTTACTTGTAAAAAC+AGG + tig0031948:12544-12563 Msa1447910:intron 15.0%
!!! TAAATTTTTTCTTTTGGAAA+AGG - tig0031948:13025-13044 None:intergenic 15.0%
!!! TGTAGATAAATTTTTTCTTT+TGG - tig0031948:13031-13050 None:intergenic 15.0%
!!! TTAGATATTTTCTAATAAGA+TGG + tig0031948:14203-14222 Msa1447910:intron 15.0%
!! GATATTACATTTATAATAAC+TGG - tig0031948:15258-15277 None:intergenic 15.0%
!!! GAAATCAAATTTTTATTTGA+GGG - tig0031948:15929-15948 None:intergenic 15.0%
!!! TGAAATCAAATTTTTATTTG+AGG - tig0031948:15930-15949 None:intergenic 15.0%
!! AATATTCTAAATTTCCTAAT+CGG - tig0031948:16227-16246 None:intergenic 15.0%
!! ATTTACTATTGTTTGAATAA+TGG + tig0031948:16244-16263 Msa1447910:intron 15.0%
!! TGGAATTAAATTAATGTTGA+AGG - tig0031948:9591-9610 None:intergenic 20.0%
!! TTTATAGAAGAAAATAATGC+TGG + tig0031948:9723-9742 Msa1447910:CDS 20.0%
!! TGATTAGATTTACTCATTAA+TGG - tig0031948:9877-9896 None:intergenic 20.0%
!! ATATTAAACTGTGATCTAAT+TGG + tig0031948:10594-10613 Msa1447910:intron 20.0%
!! ACAAACATAACTAGTATAAT+GGG - tig0031948:10896-10915 None:intergenic 20.0%
!! AACAAACATAACTAGTATAA+TGG - tig0031948:10897-10916 None:intergenic 20.0%
!! TTATACTAGTTATGTTTGTT+TGG + tig0031948:10897-10916 Msa1447910:intron 20.0%
!!! TTTTATTGACTTCATTCTTA+AGG + tig0031948:11126-11145 Msa1447910:intron 20.0%
!!! TTTATTGACTTCATTCTTAA+GGG + tig0031948:11127-11146 Msa1447910:intron 20.0%
!!! TGTTTTCATTGTTTAAACTT+TGG - tig0031948:11410-11429 None:intergenic 20.0%
!! AGAAAATGTGAAAAGAAAAT+CGG - tig0031948:12135-12154 None:intergenic 20.0%
!! TTTCAATTGTATGACTTATT+TGG - tig0031948:12320-12339 None:intergenic 20.0%
!!! GATAGTTTTTTATTTTTCAG+AGG + tig0031948:12482-12501 Msa1447910:intron 20.0%
!!! AGTTCTGATACAAAATTAAA+CGG - tig0031948:13137-13156 None:intergenic 20.0%
!!! ATATTTAGAATCTGATATTC+AGG - tig0031948:13179-13198 None:intergenic 20.0%
!!! TATTTTTTGGTCTATATTTG+AGG - tig0031948:13597-13616 None:intergenic 20.0%
!! AAAAATTATCTTCGATTTAG+AGG - tig0031948:13755-13774 None:intergenic 20.0%
!!! GAAGATAATTTTTAACACAA+GGG + tig0031948:13762-13781 Msa1447910:intron 20.0%
!!! ATTAGTTTGTATTTCTTAGA+TGG + tig0031948:13891-13910 Msa1447910:intron 20.0%
!! AAATATCAAATTCAAATACC+AGG - tig0031948:14478-14497 None:intergenic 20.0%
!!! TTGATATTTCAGAAATTTTG+TGG + tig0031948:14489-14508 Msa1447910:intron 20.0%
!! TATACAAGATTACTTCTTAT+AGG - tig0031948:14714-14733 None:intergenic 20.0%
!!! TTAACTAATTATGTTGACTA+TGG - tig0031948:14742-14761 None:intergenic 20.0%
!!! AGAAAAGTATATTTCTTCAA+CGG - tig0031948:15153-15172 None:intergenic 20.0%
!! ATTACATTTATAATAACTGG+TGG - tig0031948:15255-15274 None:intergenic 20.0%
!! ATTGAGTTATTAGTTATTAC+TGG - tig0031948:15280-15299 None:intergenic 20.0%
!!! AAAAAGTATAACACTGAAAT+AGG - tig0031948:15417-15436 None:intergenic 20.0%
!! ATACATACATAAATGATAGA+TGG + tig0031948:15626-15645 Msa1447910:intron 20.0%
!! TAAATGACAACATAAAAATG+AGG + tig0031948:15676-15695 Msa1447910:intron 20.0%
!!! ATATGTAACCGTTTTAAATT+AGG + tig0031948:15710-15729 Msa1447910:intron 20.0%
!!! TATGTAACCGTTTTAAATTA+GGG + tig0031948:15711-15730 Msa1447910:intron 20.0%
!!! ATTATTTAGCTTAAAGATGT+TGG - tig0031948:15958-15977 None:intergenic 20.0%
!!! TATTGTTTGAATAATGGATT+GGG + tig0031948:16250-16269 Msa1447910:intron 20.0%
! ATAAGAACAAGGAACAAAAT+TGG - tig0031948:9611-9630 None:intergenic 25.0%
!!! TGAAGAGGTATTTTAATTTC+AGG + tig0031948:9632-9651 Msa1447910:intron 25.0%
! TTTATTCCTCAAAAACTCTT+AGG - tig0031948:9806-9825 None:intergenic 25.0%
! ATGAGTAAATCTAATCATTC+AGG + tig0031948:9880-9899 Msa1447910:intron 25.0%
! TATATAACTGATCAAGAATC+AGG + tig0031948:10134-10153 Msa1447910:intron 25.0%
! AAAGCCAAGATATTTACAAA+GGG + tig0031948:10432-10451 Msa1447910:intron 25.0%
! GATTTACTTATGACAAAAAC+TGG + tig0031948:10478-10497 Msa1447910:intron 25.0%
! AATAATTATAATGTTCCCTG+TGG + tig0031948:10690-10709 Msa1447910:CDS 25.0%
! CACTAAGATTTCAAACAAAT+GGG + tig0031948:10920-10939 Msa1447910:intron 25.0%
! ACTAAGATTTCAAACAAATG+GGG + tig0031948:10921-10940 Msa1447910:intron 25.0%
!! TCATAACTGTAGTTTAAGTT+TGG + tig0031948:10975-10994 Msa1447910:intron 25.0%
! ATTTGGGGAAAGTTATAAAT+AGG + tig0031948:11043-11062 Msa1447910:intron 25.0%
! TTTGGGGAAAGTTATAAATA+GGG + tig0031948:11044-11063 Msa1447910:intron 25.0%
! AAAGTTATAAATAGGGCATA+TGG + tig0031948:11051-11070 Msa1447910:intron 25.0%
! TAAATGTTTCGTTAACAACA+TGG - tig0031948:11307-11326 None:intergenic 25.0%
! ACTCCATATTATATCATGTT+TGG + tig0031948:11552-11571 Msa1447910:intron 25.0%
! TCTCCAAACATGATATAATA+TGG - tig0031948:11558-11577 None:intergenic 25.0%
! TTAATACCATGAAGCTTAAA+CGG - tig0031948:11601-11620 None:intergenic 25.0%
! GATCTATATTGCTACATTAA+CGG - tig0031948:11770-11789 None:intergenic 25.0%
! TGACAATGTGTTTATAAATG+GGG - tig0031948:12062-12081 None:intergenic 25.0%
! CTGACAATGTGTTTATAAAT+GGG - tig0031948:12063-12082 None:intergenic 25.0%
!! CTTTTCACATTTTCTTTGTT+TGG + tig0031948:12140-12159 Msa1447910:intron 25.0%
! CTTCTTTAATACTTTACTGA+GGG - tig0031948:12269-12288 None:intergenic 25.0%
!!! TAAAATTTTGATACCTGTTC+TGG - tig0031948:12912-12931 None:intergenic 25.0%
! AGAATAGTTTAACTGCTTAA+CGG + tig0031948:12953-12972 Msa1447910:intron 25.0%
! ACTGTGACAATTATTTATCT+CGG + tig0031948:13092-13111 Msa1447910:intron 25.0%
!!! TTGAGCAATTTTAGAAAGTT+AGG + tig0031948:13414-13433 Msa1447910:intron 25.0%
!!! TGAGCAATTTTAGAAAGTTA+GGG + tig0031948:13415-13434 Msa1447910:intron 25.0%
!! CGAAGATAATTTTTAACACA+AGG + tig0031948:13761-13780 Msa1447910:intron 25.0%
! TATCTAAACTTGAGTTAGAT+TGG - tig0031948:14190-14209 None:intergenic 25.0%
!! TCTGATATAATGGAAATGAT+AGG - tig0031948:14549-14568 None:intergenic 25.0%
! GATTACTTCTTATAGGTTAT+TGG - tig0031948:14707-14726 None:intergenic 25.0%
!! AAGATTACTTCTTATTTGGA+TGG - tig0031948:14771-14790 None:intergenic 25.0%
!! GAAGCATTTATGAAAATAAC+AGG - tig0031948:14807-14826 None:intergenic 25.0%
! AACTAATCATTAAGCAGATT+TGG - tig0031948:14837-14856 None:intergenic 25.0%
! GTATGTATTTACAGAAGAAA+AGG - tig0031948:15614-15633 None:intergenic 25.0%
! TGATAGTCCCTAATTTAAAA+CGG - tig0031948:15721-15740 None:intergenic 25.0%
!!! CTATTGTTTGAATAATGGAT+TGG + tig0031948:16249-16268 Msa1447910:intron 25.0%
! TTTACATCTAAGAAAGACTA+TGG + tig0031948:16579-16598 Msa1447910:CDS 25.0%
! TTACATCTAAGAAAGACTAT+GGG + tig0031948:16580-16599 Msa1447910:CDS 25.0%
! TTTGACTCACATTTATTACT+TGG + tig0031948:16808-16827 Msa1447910:intron 25.0%
!! GTTACTGATTAAAACTAAAG+AGG + tig0031948:16875-16894 Msa1447910:intron 25.0%
!! GATTAAAACTAAAGAGGTAT+TGG + tig0031948:16881-16900 Msa1447910:intron 25.0%
!!! TAAATTCTAAAATGCATTGC+AGG + tig0031948:16914-16933 Msa1447910:intron 25.0%
! TTCTGTATATGTTGCTTCAT+AGG - tig0031948:9378-9397 None:intergenic 30.0%
ACATTTACTTGCATAATGCT+AGG - tig0031948:9414-9433 None:intergenic 30.0%
!! TGAAGTTTCTTAGCTTTATG+TGG + tig0031948:9485-9504 Msa1447910:CDS 30.0%
! TTCCTTGTTCTTATTTGAAG+AGG + tig0031948:9617-9636 Msa1447910:intron 30.0%
TACCTCTTCAAATAAGAACA+AGG - tig0031948:9622-9641 None:intergenic 30.0%
!!! AGAGGTATTTTAATTTCAGG+AGG + tig0031948:9635-9654 Msa1447910:intron 30.0%
!!! GTATTTTAATTTCAGGAGGA+CGG + tig0031948:9639-9658 Msa1447910:intron 30.0%
GATATAATCAGCATAAAGCT+AGG + tig0031948:9956-9975 Msa1447910:CDS 30.0%
!! GCAAGTCTTAATTTGTTAGA+CGG + tig0031948:10037-10056 Msa1447910:intron 30.0%
!!! AGTTTTTTTTGTGACAGGTA+GGG - tig0031948:10217-10236 None:intergenic 30.0%
CAAAGCCAAGATATTTACAA+AGG + tig0031948:10431-10450 Msa1447910:intron 30.0%
AACACCCTTTGTAAATATCT+TGG - tig0031948:10439-10458 None:intergenic 30.0%
TGAGTGGTTAATCAAAAACT+TGG - tig0031948:10573-10592 None:intergenic 30.0%
ATCACAGTTTAATATGTGAG+TGG - tig0031948:10589-10608 None:intergenic 30.0%
!!! CTAATTGGTTACTTTTCTGT+AGG + tig0031948:10609-10628 Msa1447910:intron 30.0%
AGTGTTACAGATAATACTGT+TGG - tig0031948:10787-10806 None:intergenic 30.0%
! ACATAACTAGTATAATGGGA+GGG - tig0031948:10892-10911 None:intergenic 30.0%
! AACATAACTAGTATAATGGG+AGG - tig0031948:10893-10912 None:intergenic 30.0%
GCACTAAGATTTCAAACAAA+TGG + tig0031948:10919-10938 Msa1447910:intron 30.0%
ATATATCCCCAGAATCATTT+GGG + tig0031948:11027-11046 Msa1447910:intron 30.0%
AATGACAGCAATTGAAGAAA+TGG + tig0031948:11165-11184 Msa1447910:CDS 30.0%
CAAGAAACAAAATGCCAATA+AGG + tig0031948:11466-11485 Msa1447910:intron 30.0%
TTTAGACATTAGGTCCTTAT+TGG - tig0031948:11483-11502 None:intergenic 30.0%
TAGCTGATGATTTAGACATT+AGG - tig0031948:11493-11512 None:intergenic 30.0%
TAATGTCTAAATCATCAGCT+AGG + tig0031948:11492-11511 Msa1447910:intron 30.0%
TAGTTATGTAAACGACTCAT+GGG - tig0031948:11527-11546 None:intergenic 30.0%
ATAGTTATGTAAACGACTCA+TGG - tig0031948:11528-11547 None:intergenic 30.0%
!! GCTTAAACTTGCTACATTAA+CGG - tig0031948:11679-11698 None:intergenic 30.0%
TTCAATGGTTCTTAAAGGAA+AGG + tig0031948:11904-11923 Msa1447910:intron 30.0%
TCTTAGAAACTTAGAAATCG+TGG + tig0031948:11988-12007 Msa1447910:intron 30.0%
GACAATGTGTTTATAAATGG+GGG - tig0031948:12061-12080 None:intergenic 30.0%
CCTGACAATGTGTTTATAAA+TGG - tig0031948:12064-12083 None:intergenic 30.0%
CCATTTATAAACACATTGTC+AGG + tig0031948:12061-12080 Msa1447910:intron 30.0%
!! CTCTAGAATATGTCAAAGTA+GGG - tig0031948:12227-12246 None:intergenic 30.0%
TTTAATACTTTACTGAGGGT+GGG - tig0031948:12265-12284 None:intergenic 30.0%
GCTTCTTTAATACTTTACTG+AGG - tig0031948:12270-12289 None:intergenic 30.0%
ACCTAATAACTTAAGCTAGT+CGG - tig0031948:12384-12403 None:intergenic 30.0%
TAGCTTAAGTTATTAGGTGA+AGG + tig0031948:12386-12405 Msa1447910:intron 30.0%
ACACTCTTATGTGGATATAA+AGG - tig0031948:12430-12449 None:intergenic 30.0%
CAAAGTTTAACACTCTTATG+TGG - tig0031948:12439-12458 None:intergenic 30.0%
!! TTTATTTTTCAGAGGACTTC+TGG + tig0031948:12490-12509 Msa1447910:intron 30.0%
!! TTATTTTTCAGAGGACTTCT+GGG + tig0031948:12491-12510 Msa1447910:intron 30.0%
CAAAGATATGATTGTTCTAC+TGG + tig0031948:12586-12605 Msa1447910:CDS 30.0%
!! ATAACATACATCGATTCTGA+TGG + tig0031948:12858-12877 Msa1447910:CDS 30.0%
TAAATCACAGCTTATCTCAT+AGG + tig0031948:12997-13016 Msa1447910:intron 30.0%
! ACAATTATTTATCTCGGTGT+AGG + tig0031948:13098-13117 Msa1447910:intron 30.0%
CTGATATTCAGGAAGAATAA+AGG - tig0031948:13168-13187 None:intergenic 30.0%
! TATGATTGTATGCACTTTTC+TGG - tig0031948:13225-13244 None:intergenic 30.0%
!! TCATAGACAAATTTGCTGAA+AGG + tig0031948:13240-13259 Msa1447910:CDS 30.0%
!! CATAGACAAATTTGCTGAAA+GGG + tig0031948:13241-13260 Msa1447910:CDS 30.0%
!! ATAGACAAATTTGCTGAAAG+GGG + tig0031948:13242-13261 Msa1447910:CDS 30.0%
! GTTTTCCAAAATAGAAGACA+CGG + tig0031948:13384-13403 Msa1447910:intron 30.0%
TATGTTTGAACTTTGAATGG+AGG + tig0031948:13438-13457 Msa1447910:intron 30.0%
!!! GAAGGGCTAAATCTATTTTT+TGG - tig0031948:13610-13629 None:intergenic 30.0%
! TAAAGGTATGTTTGGATTGA+GGG - tig0031948:13637-13656 None:intergenic 30.0%
ATCCAAACATACCTTTAGAT+AGG + tig0031948:13640-13659 Msa1447910:intron 30.0%
! TTCCTATCTAAAGGTATGTT+TGG - tig0031948:13645-13664 None:intergenic 30.0%
!!! TGTTTTAATTCAGTAGCTGA+TGG + tig0031948:13845-13864 Msa1447910:intron 30.0%
GTTTGTGTTAAGATGATTAC+AGG + tig0031948:14054-14073 Msa1447910:CDS 30.0%
CCAAATAAGAAGTAATCTTG+CGG + tig0031948:14772-14791 Msa1447910:intron 30.0%
CAAGAAAAACAACATGTTGT+TGG + tig0031948:14905-14924 Msa1447910:intron 30.0%
!! TCATCCTTTGAAATATAGCT+CGG - tig0031948:15084-15103 None:intergenic 30.0%
ACGGTAATATAAAAGAGAAG+AGG - tig0031948:15134-15153 None:intergenic 30.0%
!!! ACATGATGATGCTATTTTCT+TGG - tig0031948:15216-15235 None:intergenic 30.0%
ATAACACTGAAATAGGTGAT+AGG - tig0031948:15410-15429 None:intergenic 30.0%
ATCATTGCAATCCTAAATGA+TGG + tig0031948:15540-15559 Msa1447910:CDS 30.0%
GTGATGTATTACCATCATTT+AGG - tig0031948:15554-15573 None:intergenic 30.0%
! GGAAAATAGAAGCAAGTTTT+CGG - tig0031948:15593-15612 None:intergenic 30.0%
TGACAACATAAAAATGAGGA+CGG + tig0031948:15680-15699 Msa1447910:intron 30.0%
AAATATATGTAGCTCCTACA+AGG + tig0031948:16175-16194 Msa1447910:intron 30.0%
!!! GAATAATGGATTGGGTTTTA+TGG + tig0031948:16258-16277 Msa1447910:intron 30.0%
ATTTGCATAAACTGCAATCA+AGG - tig0031948:16302-16321 None:intergenic 30.0%
! ATCAGTTTTGCTAAAATTCG+AGG + tig0031948:16322-16341 Msa1447910:CDS 30.0%
! TCAGTTTTGCTAAAATTCGA+GGG + tig0031948:16323-16342 Msa1447910:CDS 30.0%
TTTAATCTTCTATGTACCCT+TGG + tig0031948:16384-16403 Msa1447910:CDS 30.0%
TACTAACCTTTCTGTCAAAT+AGG - tig0031948:16462-16481 None:intergenic 30.0%
CTAATTGGGACAACATTATA+AGG - tig0031948:16504-16523 None:intergenic 30.0%
TAGCAAAGGCTTATCTAATT+GGG - tig0031948:16518-16537 None:intergenic 30.0%
AAATTGTCAGGATCAAGCAA+AGG - tig0031948:9129-9148 None:intergenic 35.0%
ATTAACATGTTCGTGACTTC+AGG + tig0031948:9219-9238 Msa1447910:intron 35.0%
! AGTTCGAAAACTTGTTCTAG+TGG - tig0031948:9253-9272 None:intergenic 35.0%
! TATGTTGCTTCATAGGAGAA+GGG - tig0031948:9371-9390 None:intergenic 35.0%
! ATATGTTGCTTCATAGGAGA+AGG - tig0031948:9372-9391 None:intergenic 35.0%
TACTTGCATAATGCTAGGTA+TGG - tig0031948:9409-9428 None:intergenic 35.0%
AAAAGTTGAGGATGGAGTTA+TGG - tig0031948:9445-9464 None:intergenic 35.0%
TTATGTGGAATCCTCTTTCA+TGG + tig0031948:9500-9519 Msa1447910:CDS 35.0%
TATGTGGAATCCTCTTTCAT+GGG + tig0031948:9501-9520 Msa1447910:CDS 35.0%
TGTAGGGATTATATGCTTAC+TGG + tig0031948:9680-9699 Msa1447910:CDS 35.0%
ATTCCTCAAAAACTCTTAGG+AGG - tig0031948:9803-9822 None:intergenic 35.0%
CATAATCAAGTACAGGAAGA+AGG - tig0031948:9836-9855 None:intergenic 35.0%
CTTCTTCCTGTACTTGATTA+TGG + tig0031948:9834-9853 Msa1447910:intron 35.0%
! AAGGTACCATAATCAAGTAC+AGG - tig0031948:9843-9862 None:intergenic 35.0%
ATTAATGGTACATGCAAGGA+AGG - tig0031948:9862-9881 None:intergenic 35.0%
ACTCATTAATGGTACATGCA+AGG - tig0031948:9866-9885 None:intergenic 35.0%
!! ATCATTCAGGTTCTAAGAGA+TGG + tig0031948:9893-9912 Msa1447910:intron 35.0%
!!! ATGCAGCTATTTTAGTACCT+GGG + tig0031948:9933-9952 Msa1447910:CDS 35.0%
! TTTATGCTGATTATATCCCC+AGG - tig0031948:9953-9972 None:intergenic 35.0%
CTAACAAATTAAGACTTGCC+TGG - tig0031948:10036-10055 None:intergenic 35.0%
TAACTGATCAAGAATCAGGA+CGG + tig0031948:10138-10157 Msa1447910:intron 35.0%
!!! CAGTTTTTTTTGTGACAGGT+AGG - tig0031948:10218-10237 None:intergenic 35.0%
CTACCTGTCACAAAAAAAAC+TGG + tig0031948:10216-10235 Msa1447910:CDS 35.0%
!!! TCACCAGTTTTTTTTGTGAC+AGG - tig0031948:10222-10241 None:intergenic 35.0%
!!! ACAGGGATTCATTCCTTTTT+TGG + tig0031948:10300-10319 Msa1447910:CDS 35.0%
CTGAAAATGTCCAACAACTT+CGG - tig0031948:10352-10371 None:intergenic 35.0%
! AGTTGTTGGACATTTTCAGA+AGG + tig0031948:10353-10372 Msa1447910:CDS 35.0%
! CATTTTCAGAAGGTAACTCT+CGG + tig0031948:10363-10382 Msa1447910:intron 35.0%
TGTCATAAGTAAATCAAGCC+AGG - tig0031948:10473-10492 None:intergenic 35.0%
TATGACAAAAACTGGAACAG+AGG + tig0031948:10486-10505 Msa1447910:intron 35.0%
AATGCAGAAGTTACCAATTG+AGG - tig0031948:10641-10660 None:intergenic 35.0%
TGCATTTGCTCAATAGCTAT+AGG + tig0031948:10655-10674 Msa1447910:CDS 35.0%
GCATTTGCTCAATAGCTATA+GGG + tig0031948:10656-10675 Msa1447910:CDS 35.0%
AATACTGTTGGCATAGCTAT+GGG - tig0031948:10775-10794 None:intergenic 35.0%
TAATACTGTTGGCATAGCTA+TGG - tig0031948:10776-10795 None:intergenic 35.0%
TTATCTGTAACACTTGCCAT+TGG + tig0031948:10793-10812 Msa1447910:CDS 35.0%
TAATGGGAGGGAATTTGATA+CGG - tig0031948:10880-10899 None:intergenic 35.0%
CAAAGTCTGTAATACTCCTA+AGG + tig0031948:10998-11017 Msa1447910:intron 35.0%
GGGGATATATGATTATCCTT+AGG - tig0031948:11017-11036 None:intergenic 35.0%
CATATATCCCCAGAATCATT+TGG + tig0031948:11026-11045 Msa1447910:intron 35.0%
TATATCCCCAGAATCATTTG+GGG + tig0031948:11028-11047 Msa1447910:intron 35.0%
AACTTTCCCCAAATGATTCT+GGG - tig0031948:11037-11056 None:intergenic 35.0%
TAACTTTCCCCAAATGATTC+TGG - tig0031948:11038-11057 None:intergenic 35.0%
TGTTGATCGGAATCTTATAG+AGG + tig0031948:11246-11265 Msa1447910:CDS 35.0%
TGTAGCAAGTTTAAGCTTCA+TGG + tig0031948:11683-11702 Msa1447910:intron 35.0%
AGATCGTATCTTAGAAATCG+TGG + tig0031948:11785-11804 Msa1447910:intron 35.0%
TGGTTCAATGGTTCTTAAAG+AGG + tig0031948:11901-11920 Msa1447910:intron 35.0%
AGAAACTTAGAAATCGTGGT+TGG + tig0031948:11992-12011 Msa1447910:intron 35.0%
GAAACTTAGAAATCGTGGTT+GGG + tig0031948:11993-12012 Msa1447910:intron 35.0%
CTAACACAATCTCACAAAAC+CGG + tig0031948:12017-12036 Msa1447910:intron 35.0%
GAACTCTTAACATCGTAACT+AGG + tig0031948:12103-12122 Msa1447910:intron 35.0%
AAGTCTCTTAAATTGCCATC+TGG + tig0031948:12174-12193 Msa1447910:intron 35.0%
!! CCTCTAGAATATGTCAAAGT+AGG - tig0031948:12228-12247 None:intergenic 35.0%
CCTACTTTGACATATTCTAG+AGG + tig0031948:12225-12244 Msa1447910:intron 35.0%
TTAATACTTTACTGAGGGTG+GGG - tig0031948:12264-12283 None:intergenic 35.0%
CTTTAATACTTTACTGAGGG+TGG - tig0031948:12266-12285 None:intergenic 35.0%
!! TCCGACTAGCTTAAGTTATT+AGG + tig0031948:12380-12399 Msa1447910:intron 35.0%
! ATTCTGATGGCAACTTTTAC+AGG + tig0031948:12871-12890 Msa1447910:CDS 35.0%
! TTCTGATGGCAACTTTTACA+GGG + tig0031948:12872-12891 Msa1447910:CDS 35.0%
! TATTTTCGTTTCCTGCTGAA+AGG + tig0031948:13317-13336 Msa1447910:intron 35.0%
CATTAAATTCTCCTTTCAGC+AGG - tig0031948:13331-13350 None:intergenic 35.0%
! TATGACCGTGTCTTCTATTT+TGG - tig0031948:13392-13411 None:intergenic 35.0%
GGGTATGTTTGAACTTTGAA+TGG + tig0031948:13435-13454 Msa1447910:intron 35.0%
! GAACTTTGAATGGAGGATTT+TGG + tig0031948:13445-13464 Msa1447910:intron 35.0%
! TTTGAATGGAGGATTTTGGA+GGG + tig0031948:13449-13468 Msa1447910:intron 35.0%
!!! TTTGGATTGAGGGTTTTGAA+GGG - tig0031948:13627-13646 None:intergenic 35.0%
! CTAAAGGTATGTTTGGATTG+AGG - tig0031948:13638-13657 None:intergenic 35.0%
!! GATGGATTATAACCTCTTTC+AGG + tig0031948:13909-13928 Msa1447910:intron 35.0%
!! GGAAGTACCTGAAAAATCAA+AGG + tig0031948:13930-13949 Msa1447910:intron 35.0%
TCATCTTAACACAAACACCA+AGG - tig0031948:14050-14069 None:intergenic 35.0%
ACTTGAGTTAGATTGGAACA+TGG - tig0031948:14183-14202 None:intergenic 35.0%
ATGCACTTGCACATTTGAAA+TGG + tig0031948:14258-14277 Msa1447910:intron 35.0%
TACCCTTCTTCATCTTTGTT+GGG + tig0031948:14376-14395 Msa1447910:CDS 35.0%
ATTCTCTGCATTTGTTTGCT+GGG - tig0031948:14617-14636 None:intergenic 35.0%
CCGCAAGATTACTTCTTATT+TGG - tig0031948:14775-14794 None:intergenic 35.0%
AAGAAGTAATCTTGCGGATA+TGG + tig0031948:14778-14797 Msa1447910:intron 35.0%
!! TGTGTTCTGAAAGTATTCGT+TGG - tig0031948:14863-14882 None:intergenic 35.0%
CTGATAATAACACTTAAGCC+AGG - tig0031948:15046-15065 None:intergenic 35.0%
GGAATCAAGCTTTCATATTG+AGG - tig0031948:15195-15214 None:intergenic 35.0%
TACCACTATCCTTATTGTGA+TGG - tig0031948:15378-15397 None:intergenic 35.0%
! AATAGAAGCAAGTTTTCGGA+TGG - tig0031948:15589-15608 None:intergenic 35.0%
! GTTTTGTACCTCAAAGAAAG+TGG - tig0031948:15882-15901 None:intergenic 35.0%
TTTCTCACTGTCACTAGATA+AGG - tig0031948:16012-16031 None:intergenic 35.0%
GAGTAACAAAAATTAGAGCC+TGG - tig0031948:16073-16092 None:intergenic 35.0%
TACCAGCTGAGCTATTATAA+AGG - tig0031948:16147-16166 None:intergenic 35.0%
TCCATTACATGAATCCGATT+AGG + tig0031948:16210-16229 Msa1447910:intron 35.0%
TCCTAATCGGATTCATGTAA+TGG - tig0031948:16214-16233 None:intergenic 35.0%
!! GGATTGGGTTTTATGGATTA+TGG + tig0031948:16265-16284 Msa1447910:intron 35.0%
!! TTTTATGGATTATGGTCAGG+TGG + tig0031948:16273-16292 Msa1447910:intron 35.0%
TTTGCTAAAATTCGAGGGAT+TGG + tig0031948:16328-16347 Msa1447910:CDS 35.0%
TAAAATTCGAGGGATTGGAT+GGG + tig0031948:16333-16352 Msa1447910:CDS 35.0%
GAATCTCCTATTTGACAGAA+AGG + tig0031948:16453-16472 Msa1447910:CDS 35.0%
CATTATAAGGCGAAACTAGA+GGG - tig0031948:16491-16510 None:intergenic 35.0%
ACATTATAAGGCGAAACTAG+AGG - tig0031948:16492-16511 None:intergenic 35.0%
CTAGCAAAGGCTTATCTAAT+TGG - tig0031948:16519-16538 None:intergenic 35.0%
TAAGCATACACAACTAGCAA+AGG - tig0031948:16532-16551 None:intergenic 35.0%
ATCTAAGAAAGACTATGGGA+CGG + tig0031948:16584-16603 Msa1447910:CDS 35.0%
TTCAAGAGAAACAGGTAAGA+AGG - tig0031948:16776-16795 None:intergenic 35.0%
AGAGATCATTCAAGAGAAAC+AGG - tig0031948:16784-16803 None:intergenic 35.0%
!! TCAGTAACACAGCTTTAAGT+GGG - tig0031948:16863-16882 None:intergenic 35.0%
!! ATCAGTAACACAGCTTTAAG+TGG - tig0031948:16864-16883 None:intergenic 35.0%
ACTCAAAAATGTAGACCTGA+AGG + tig0031948:16984-17003 Msa1447910:CDS 35.0%
TTACCAAATCAATGCCCTCT+CGG - tig0031948:9155-9174 None:intergenic 40.0%
TTGGGCCAAATATGTGAAGT+CGG - tig0031948:9321-9340 None:intergenic 40.0%
! TCCTCTCTTCGAGTTTGTTT+GGG - tig0031948:9339-9358 None:intergenic 40.0%
! TTCCTCTCTTCGAGTTTGTT+TGG - tig0031948:9340-9359 None:intergenic 40.0%
! ATGTTGCTTCATAGGAGAAG+GGG - tig0031948:9370-9389 None:intergenic 40.0%
TTCTCCTGCAACAAAAGTTG+AGG - tig0031948:9457-9476 None:intergenic 40.0%
! GAATCCTCTTTCATGGGTTA+TGG + tig0031948:9507-9526 Msa1447910:CDS 40.0%
CTGATTGGCAAGACTTTGTA+GGG + tig0031948:9664-9683 Msa1447910:CDS 40.0%
CTCAAAAACTCTTAGGAGGA+AGG - tig0031948:9799-9818 None:intergenic 40.0%
! CTTCCTCCTAAGAGTTTTTG+AGG + tig0031948:9797-9816 Msa1447910:intron 40.0%
!! TTCAGGTTCTAAGAGATGGT+CGG + tig0031948:9897-9916 Msa1447910:intron 40.0%
!!! GATGCAGCTATTTTAGTACC+TGG + tig0031948:9932-9951 Msa1447910:CDS 40.0%
!!! TGCAGCTATTTTAGTACCTG+GGG + tig0031948:9934-9953 Msa1447910:CDS 40.0%
!! TTGCCTGGTCAATTTTGAGA+GGG - tig0031948:10021-10040 None:intergenic 40.0%
ACGGAGTTCATATGATGACT+TGG + tig0031948:10157-10176 Msa1447910:intron 40.0%
! CACAAAAAAAACTGGTGACG+AGG + tig0031948:10224-10243 Msa1447910:CDS 40.0%
TCAGGTTCAACGTGTAAACA+CGG + tig0031948:10252-10271 Msa1447910:CDS 40.0%
AAGCTGTAGTGATAGCAACA+GGG + tig0031948:10283-10302 Msa1447910:CDS 40.0%
!!! GTGTGCTGCTTTTCCAAAAA+AGG - tig0031948:10316-10335 None:intergenic 40.0%
!! TTTTGGAAAAGCAGCACACT+TGG + tig0031948:10317-10336 Msa1447910:CDS 40.0%
AAAACTGGAACAGAGGAGTA+AGG + tig0031948:10493-10512 Msa1447910:intron 40.0%
CTGTAGGTTCTTACCTCAAT+TGG + tig0031948:10625-10644 Msa1447910:intron 40.0%
TGATTCCATCCCTGTATGAA+CGG - tig0031948:10720-10739 None:intergenic 40.0%
AACCTTCTTGTTCTCCTGAT+TGG + tig0031948:10742-10761 Msa1447910:CDS 40.0%
ACTTTCCCCAAATGATTCTG+GGG - tig0031948:11036-11055 None:intergenic 40.0%
ACAGCAATTGAAGAAATGGC+AGG + tig0031948:11169-11188 Msa1447910:CDS 40.0%
AATTGAAGAAATGGCAGGCA+TGG + tig0031948:11174-11193 Msa1447910:CDS 40.0%
TGTCCTATGCAGTGACAAAA+CGG + tig0031948:11198-11217 Msa1447910:CDS 40.0%
TTAATCGCCTGTCTGTTGAT+CGG + tig0031948:11233-11252 Msa1447910:CDS 40.0%
TAAGATTCCGATCAACAGAC+AGG - tig0031948:11243-11262 None:intergenic 40.0%
GATCGGAATCTTATAGAGGT+AGG + tig0031948:11250-11269 Msa1447910:intron 40.0%
TTGAAGCCGTTTAAGCTTCA+TGG + tig0031948:11592-11611 Msa1447910:intron 40.0%
CGTATCTTAGAAATCGTGGT+TGG + tig0031948:11789-11808 Msa1447910:intron 40.0%
GGTGGTTCAATGGTTCTTAA+AGG + tig0031948:11899-11918 Msa1447910:intron 40.0%
!! CGGTTTTGTGAGATTGTGTT+AGG - tig0031948:12019-12038 None:intergenic 40.0%
TTAAGAGTTCCACATCGGAT+AGG - tig0031948:12093-12112 None:intergenic 40.0%
CGATGTTAAGAGTTCCACAT+CGG - tig0031948:12098-12117 None:intergenic 40.0%
! AGTTGGTTCATGACAAACAG+TGG - tig0031948:12359-12378 None:intergenic 40.0%
ACTTAAGCTAGTCGGAAAGT+TGG - tig0031948:12376-12395 None:intergenic 40.0%
!! TTCAGGTGAAGCTCTAAGTA+AGG - tig0031948:12526-12545 None:intergenic 40.0%
ATTAACGATGGCAGCATCAA+TGG - tig0031948:12645-12664 None:intergenic 40.0%
ATCAGCGAGCATATTAACGA+TGG - tig0031948:12657-12676 None:intergenic 40.0%
TAATATGCTCGCTGATCCAA+AGG + tig0031948:12661-12680 Msa1447910:CDS 40.0%
TCTTTACACTCTACCTCCTT+TGG - tig0031948:12680-12699 None:intergenic 40.0%
! CCATATTGTTGCGGAGTATT+GGG - tig0031948:12724-12743 None:intergenic 40.0%
TCCATATTGTTGCGGAGTAT+TGG - tig0031948:12725-12744 None:intergenic 40.0%
CCATTGCTTCCATATTGTTG+CGG - tig0031948:12733-12752 None:intergenic 40.0%
! GATTTCCCCTTTTTCTCTAC+AGG + tig0031948:12773-12792 Msa1447910:intron 40.0%
TTTCTACCATTCAATCCCGT+AGG + tig0031948:12822-12841 Msa1447910:CDS 40.0%
TATAGCTGTACGTTTGCCTA+CGG - tig0031948:12841-12860 None:intergenic 40.0%
TGGAAATCGTGTCTTTGTCT+TGG - tig0031948:13205-13224 None:intergenic 40.0%
CGAAAATACAGCAGGATAAC+TGG - tig0031948:13305-13324 None:intergenic 40.0%
! CTTTGAATGGAGGATTTTGG+AGG + tig0031948:13448-13467 Msa1447910:intron 40.0%
!! GTTTGGATTGAGGGTTTTGA+AGG - tig0031948:13628-13647 None:intergenic 40.0%
GTGAGTGGTTTCCTATCTAA+AGG - tig0031948:13654-13673 None:intergenic 40.0%
TGCTTTCACCCTTCATGATA+TGG + tig0031948:13675-13694 Msa1447910:intron 40.0%
GCAGAGTCTCTATAACTATG+TGG + tig0031948:13700-13719 Msa1447910:intron 40.0%
! TCTTCGATTTAGAGGTACGA+GGG - tig0031948:13747-13766 None:intergenic 40.0%
! ATCTTCGATTTAGAGGTACG+AGG - tig0031948:13748-13767 None:intergenic 40.0%
TTGAAGTCGTCACAATACAC+AGG - tig0031948:13795-13814 None:intergenic 40.0%
CGACTTCAAACTTTGTGTGA+AGG + tig0031948:13806-13825 Msa1447910:intron 40.0%
! TTTCAGGTACTTCCTGAAAG+AGG - tig0031948:13924-13943 None:intergenic 40.0%
!! GGGCTATCCTTTGATTTTTC+AGG - tig0031948:13940-13959 None:intergenic 40.0%
GAAAAATCAAAGGATAGCCC+TGG + tig0031948:13940-13959 Msa1447910:CDS 40.0%
AACAAACCACAAAACGTCCA+AGG - tig0031948:13970-13989 None:intergenic 40.0%
! TGTCTTGGTGGATCAAACAA+AGG - tig0031948:13994-14013 None:intergenic 40.0%
GTTAGATTGGAACATGGCAT+TGG - tig0031948:14177-14196 None:intergenic 40.0%
GAAATGGTGAAGTCTTGATG+AGG + tig0031948:14274-14293 Msa1447910:intron 40.0%
GCAGTTTACATGTCAATGCA+GGG + tig0031948:14296-14315 Msa1447910:intron 40.0%
CAGTTTACATGTCAATGCAG+GGG + tig0031948:14297-14316 Msa1447910:intron 40.0%
GTACCCTTCTTCATCTTTGT+TGG + tig0031948:14375-14394 Msa1447910:CDS 40.0%
GACCCAACAAAGATGAAGAA+GGG - tig0031948:14381-14400 None:intergenic 40.0%
TTTCAATGAGCTCGTCTACT+GGG - tig0031948:14429-14448 None:intergenic 40.0%
! TTTTCAATGAGCTCGTCTAC+TGG - tig0031948:14430-14449 None:intergenic 40.0%
AGTAGACGAGCTCATTGAAA+AGG + tig0031948:14429-14448 Msa1447910:CDS 40.0%
! ATTTGTTTGCTGGGATAGTG+AGG - tig0031948:14608-14627 None:intergenic 40.0%
CATTCTCTGCATTTGTTTGC+TGG - tig0031948:14618-14637 None:intergenic 40.0%
CAACATGTTGTTGGAATGAC+TGG + tig0031948:14914-14933 Msa1447910:CDS 40.0%
TATATCAGCAGCACTTCTTG+CGG - tig0031948:15011-15030 None:intergenic 40.0%
! GATATAGTCTTAACTGAGCC+TGG + tig0031948:15025-15044 Msa1447910:CDS 40.0%
CTAGCCGAGCTATATTTCAA+AGG + tig0031948:15077-15096 Msa1447910:CDS 40.0%
ATGCAGTCTCCATCACAATA+AGG + tig0031948:15366-15385 Msa1447910:intron 40.0%
CTCCATCACAATAAGGATAG+TGG + tig0031948:15373-15392 Msa1447910:intron 40.0%
AACTATATCCTCTTGCAGCT+TGG + tig0031948:15462-15481 Msa1447910:intron 40.0%
TTGTTCTCCTAGCATCAATC+TGG + tig0031948:15487-15506 Msa1447910:CDS 40.0%
CATACTTCCAGATTGATGCT+AGG - tig0031948:15497-15516 None:intergenic 40.0%
! GTATGATTTTCCACCCTTCA+TGG + tig0031948:15512-15531 Msa1447910:CDS 40.0%
GCAATGATCAAGACCATGAA+GGG - tig0031948:15528-15547 None:intergenic 40.0%
TGCAATGATCAAGACCATGA+AGG - tig0031948:15529-15548 None:intergenic 40.0%
CCTTACTCTGTCTTTAGCTA+TGG - tig0031948:15747-15766 None:intergenic 40.0%
CCATAGCTAAAGACAGAGTA+AGG + tig0031948:15744-15763 Msa1447910:CDS 40.0%
ACTCCTGTTGCAAATATCTC+AGG - tig0031948:15800-15819 None:intergenic 40.0%
TTTGCAACAGGAGTAGTGAT+TGG + tig0031948:15806-15825 Msa1447910:CDS 40.0%
TTGCAACAGGAGTAGTGATT+GGG + tig0031948:15807-15826 Msa1447910:CDS 40.0%
TAAGGTGGTTACATGGAAGT+GGG - tig0031948:15994-16013 None:intergenic 40.0%
ATAAGGTGGTTACATGGAAG+TGG - tig0031948:15995-16014 None:intergenic 40.0%
CACTAGATAAGGTGGTTACA+TGG - tig0031948:16001-16020 None:intergenic 40.0%
! GACATATCAAAGCACCTTGT+AGG - tig0031948:16192-16211 None:intergenic 40.0%
!! GGGTTTTATGGATTATGGTC+AGG + tig0031948:16270-16289 Msa1447910:intron 40.0%
TGCATAAACTGCAATCAAGG+TGG - tig0031948:16299-16318 None:intergenic 40.0%
CTAAAATTCGAGGGATTGGA+TGG + tig0031948:16332-16351 Msa1447910:CDS 40.0%
AAAATTCGAGGGATTGGATG+GGG + tig0031948:16334-16353 Msa1447910:CDS 40.0%
!! GTGAACTTGATGATGTCCAA+GGG - tig0031948:16403-16422 None:intergenic 40.0%
!! TGTGAACTTGATGATGTCCA+AGG - tig0031948:16404-16423 None:intergenic 40.0%
GTCTTCTATGATAGCTGAAC+AGG + tig0031948:16695-16714 Msa1447910:CDS 40.0%
! TAGCCAGGTACGTTCAATTT+TGG + tig0031948:16736-16755 Msa1447910:intron 40.0%
!! AGTAACACAGCTTTAAGTGG+GGG - tig0031948:16861-16880 None:intergenic 40.0%
!! CAGTAACACAGCTTTAAGTG+GGG - tig0031948:16862-16881 None:intergenic 40.0%
!! TTCTAAAATGCATTGCAGGC+TGG + tig0031948:16918-16937 Msa1447910:intron 40.0%
! TCTAAAATGCATTGCAGGCT+GGG + tig0031948:16919-16938 Msa1447910:intron 40.0%
TCCTGACAATTTCAACCGAG+AGG + tig0031948:9137-9156 Msa1447910:CDS 45.0%
CCTGACAATTTCAACCGAGA+GGG + tig0031948:9138-9157 Msa1447910:CDS 45.0%
CTGTTGAAAACATCACCGAG+AGG + tig0031948:9271-9290 Msa1447910:CDS 45.0%
GAAGCCCGACTTCACATATT+TGG + tig0031948:9313-9332 Msa1447910:CDS 45.0%
TGGGCCAAATATGTGAAGTC+GGG - tig0031948:9320-9339 None:intergenic 45.0%
CCTGCAACAAAAGTTGAGGA+TGG - tig0031948:9453-9472 None:intergenic 45.0%
! CCATCCTCAACTTTTGTTGC+AGG + tig0031948:9450-9469 Msa1447910:intron 45.0%
GCTTCCATAACCCATGAAAG+AGG - tig0031948:9514-9533 None:intergenic 45.0%
! TATGGAAGCAGCAGCATTGA+TGG + tig0031948:9525-9544 Msa1447910:CDS 45.0%
ATGGCAATTGTCCTTGCCAA+TGG + tig0031948:9544-9563 Msa1447910:CDS 45.0%
!!! TTTTGTACTGACTCCGCCAT+TGG - tig0031948:9563-9582 None:intergenic 45.0%
CCTACAAAGTCTTGCCAATC+AGG - tig0031948:9666-9685 None:intergenic 45.0%
CCTGATTGGCAAGACTTTGT+AGG + tig0031948:9663-9682 Msa1447910:CDS 45.0%
AGACCCTCTCAAAATTGACC+AGG + tig0031948:10015-10034 Msa1447910:CDS 45.0%
! CTTGCCTGGTCAATTTTGAG+AGG - tig0031948:10022-10041 None:intergenic 45.0%
GAAGCTGTAGTGATAGCAAC+AGG + tig0031948:10282-10301 Msa1447910:CDS 45.0%
! GTTGACAGTACCGAAGTTGT+TGG + tig0031948:10339-10358 Msa1447910:CDS 45.0%
! GGGTGTTGCAATACAATTCC+TGG + tig0031948:10452-10471 Msa1447910:intron 45.0%
CTCCAATCAGGAGAACAAGA+AGG - tig0031948:10747-10766 None:intergenic 45.0%
CTTCTTGTTCTCCTGATTGG+AGG + tig0031948:10745-10764 Msa1447910:CDS 45.0%
CTATGGGAATTCCTCCAATC+AGG - tig0031948:10759-10778 None:intergenic 45.0%
ACTTGCAAACCTGCTGAGAA+AGG - tig0031948:10828-10847 None:intergenic 45.0%
! AGAAAAAGCACAGTCAGCTG+CGG - tig0031948:11103-11122 None:intergenic 45.0%
GTCCTATGCAGTGACAAAAC+GGG + tig0031948:11199-11218 Msa1447910:CDS 45.0%
! TACCCGTTTTGTCACTGCAT+AGG - tig0031948:11204-11223 None:intergenic 45.0%
!! AATAGTGCTGGTTTGTGAGG+GGG - tig0031948:11824-11843 None:intergenic 45.0%
!! CAATAGTGCTGGTTTGTGAG+GGG - tig0031948:11825-11844 None:intergenic 45.0%
!! CCAATAGTGCTGGTTTGTGA+GGG - tig0031948:11826-11845 None:intergenic 45.0%
CCTCACAAACCAGCACTATT+GGG + tig0031948:11824-11843 Msa1447910:intron 45.0%
! GCTTGGTTCGTGGACATAAA+TGG + tig0031948:11846-11865 Msa1447910:intron 45.0%
TGGTTCGTGGACATAAATGG+TGG + tig0031948:11849-11868 Msa1447910:intron 45.0%
GGTTCGTGGACATAAATGGT+GGG + tig0031948:11850-11869 Msa1447910:intron 45.0%
TGCTATCAGGTTTCCTTTCC+TGG - tig0031948:11879-11898 None:intergenic 45.0%
AGGAAAGGAAACCTGATAGC+AGG + tig0031948:11878-11897 Msa1447910:intron 45.0%
AAAGGAAACCTGATAGCAGG+TGG + tig0031948:11881-11900 Msa1447910:intron 45.0%
AGGAAAGGAAACCTGATAGC+AGG + tig0031948:11878-11897 Msa1447910:intron 45.0%
AAAGGAAACCTGATAGCAGG+TGG + tig0031948:11881-11900 Msa1447910:intron 45.0%
TGATTGTTCTACTGGCAGCT+AGG + tig0031948:12594-12613 Msa1447910:CDS 45.0%
GATTGTTCTACTGGCAGCTA+GGG + tig0031948:12595-12614 Msa1447910:CDS 45.0%
GGCAGCAAGATTGGAAAATC+AGG + tig0031948:12616-12635 Msa1447910:CDS 45.0%
CCCAATACTCCGCAACAATA+TGG + tig0031948:12721-12740 Msa1447910:intron 45.0%
CCGCAACAATATGGAAGCAA+TGG + tig0031948:12730-12749 Msa1447910:intron 45.0%
ACGTGCCTGTAGAGAAAAAG+GGG - tig0031948:12781-12800 None:intergenic 45.0%
CACGTGCCTGTAGAGAAAAA+GGG - tig0031948:12782-12801 None:intergenic 45.0%
ATAGCTGTACGTTTGCCTAC+GGG - tig0031948:12840-12859 None:intergenic 45.0%
! AACTTTTACAGGGCCAGCAA+AGG + tig0031948:12882-12901 Msa1447910:CDS 45.0%
!!! ATCTCTTGCGGTTGCTTTTC+AGG + tig0031948:13271-13290 Msa1447910:CDS 45.0%
GCAGGAAACGAAAATACAGC+AGG - tig0031948:13313-13332 None:intergenic 45.0%
CTCTGCTGCCATATCATGAA+GGG - tig0031948:13686-13705 None:intergenic 45.0%
ACTCTGCTGCCATATCATGA+AGG - tig0031948:13687-13706 None:intergenic 45.0%
! TTAGAGGTACGAGGGAAACA+AGG - tig0031948:13739-13758 None:intergenic 45.0%
! TCAGTAGCTGATGGAAGCAT+TGG + tig0031948:13854-13873 Msa1447910:intron 45.0%
AAATCAAAGGATAGCCCTGG+AGG + tig0031948:13943-13962 Msa1447910:CDS 45.0%
AAGGTTAAGTGCTCTTCGGA+TGG - tig0031948:14031-14050 None:intergenic 45.0%
!! ATCCGAAGAGCACTTAACCT+TGG + tig0031948:14030-14049 Msa1447910:CDS 45.0%
CACCAAGGTTAAGTGCTCTT+CGG - tig0031948:14035-14054 None:intergenic 45.0%
CAGAGAATTGTGTGCTTCTG+CGG + tig0031948:14136-14155 Msa1447910:intron 45.0%
GGCAGTTTACATGTCAATGC+AGG + tig0031948:14295-14314 Msa1447910:intron 45.0%
GGATCAGTTGGCTATTGCAA+AGG + tig0031948:14318-14337 Msa1447910:CDS 45.0%
GTTGGCTATTGCAAAGGAGA+CGG + tig0031948:14324-14343 Msa1447910:CDS 45.0%
TTGGCTATTGCAAAGGAGAC+GGG + tig0031948:14325-14344 Msa1447910:CDS 45.0%
CGACCCAACAAAGATGAAGA+AGG - tig0031948:14382-14401 None:intergenic 45.0%
GAGCTCATTGAAAAGGCAGA+TGG + tig0031948:14436-14455 Msa1447910:CDS 45.0%
GTTGTTGGAATGACTGGAGA+TGG + tig0031948:14920-14939 Msa1447910:CDS 45.0%
AGATGGAGTAAATGATGCCC+CGG + tig0031948:14937-14956 Msa1447910:CDS 45.0%
ATGTCCGCTTTCTTCAATGC+CGG - tig0031948:14959-14978 None:intergenic 45.0%
GCATTGAAGAAAGCGGACAT+TGG + tig0031948:14959-14978 Msa1447910:CDS 45.0%
GAACAAAACCAAGCTGCAAG+AGG - tig0031948:15473-15492 None:intergenic 45.0%
ATGATCAAGACCATGAAGGG+TGG - tig0031948:15525-15544 None:intergenic 45.0%
CTGCCTGAGATATTTGCAAC+AGG + tig0031948:15794-15813 Msa1447910:CDS 45.0%
GATTGGGACTTACCTTGCTT+TGG + tig0031948:15823-15842 Msa1447910:CDS 45.0%
AGAGGACAGTAACCAAAGCA+AGG - tig0031948:15838-15857 None:intergenic 45.0%
TGGTTACTGTCCTCTTCTAC+TGG + tig0031948:15843-15862 Msa1447910:CDS 45.0%
GGTTACTGTCCTCTTCTACT+GGG + tig0031948:15844-15863 Msa1447910:CDS 45.0%
AGTCGAGACCACTTTCTTTG+AGG + tig0031948:15871-15890 Msa1447910:CDS 45.0%
CTCACTGTCACTAGATAAGG+TGG - tig0031948:16009-16028 None:intergenic 45.0%
GCAAGTTAGCATCATTAGCC+AGG + tig0031948:16052-16071 Msa1447910:CDS 45.0%
! ATTTTTGTTACTCGCAGCCG+TGG + tig0031948:16080-16099 Msa1447910:CDS 45.0%
TCTCCAGAAATGACCAACCA+CGG - tig0031948:16100-16119 None:intergenic 45.0%
CGCCTTTATAATAGCTCAGC+TGG + tig0031948:16142-16161 Msa1447910:CDS 45.0%
ATTCCATGCTTCTCCACTCA+AGG - tig0031948:16437-16456 None:intergenic 45.0%
AAGACTATGGGACGGAAGAT+AGG + tig0031948:16592-16611 Msa1447910:CDS 45.0%
AGACTATGGGACGGAAGATA+GGG + tig0031948:16593-16612 Msa1447910:CDS 45.0%
! AGCAAAGTGGGTTCTTTCTC+AGG + tig0031948:16617-16636 Msa1447910:CDS 45.0%
! GCAAAGTGGGTTCTTTCTCA+GGG + tig0031948:16618-16637 Msa1447910:CDS 45.0%
GAGCCAAAATTGAACGTACC+TGG - tig0031948:16742-16761 None:intergenic 45.0%
!! GATCAAGGGTGTTATGGAGA+AGG - tig0031948:16839-16858 None:intergenic 45.0%
!! AGCTTTAAGTGGGGGATCAA+GGG - tig0031948:16853-16872 None:intergenic 45.0%
CTAAAATGCATTGCAGGCTG+GGG + tig0031948:16920-16939 Msa1447910:intron 45.0%
TAAAATGCATTGCAGGCTGG+GGG + tig0031948:16921-16940 Msa1447910:intron 45.0%
!! GATTAATTATTTATTATATA+TGG + tig0031948:10518-10537 Msa1447910:intron 5.0%
!! ATAAAAAAAATTAAAAATTG+AGG + tig0031948:12293-12312 Msa1447910:intron 5.0%
CCCTCTCGGTTGAAATTGTC+AGG - tig0031948:9141-9160 None:intergenic 50.0%
!! CAACCGAGAGGGCATTGATT+TGG + tig0031948:9149-9168 Msa1447910:CDS 50.0%
GCCCAAACAAACTCGAAGAG+AGG + tig0031948:9335-9354 Msa1447910:CDS 50.0%
GCAATTGTCCTTGCCAATGG+CGG + tig0031948:9547-9566 Msa1447910:CDS 50.0%
TACTGCTGCAGCAGCACTAA+TGG + tig0031948:9746-9765 Msa1447910:CDS 50.0%
TCGCTTAGCTCCTCGAACAA+AGG + tig0031948:9770-9789 Msa1447910:CDS 50.0%
AGGAAGGTCACCTTTGTTCG+AGG - tig0031948:9783-9802 None:intergenic 50.0%
!! AGGTTCTAAGAGATGGTCGG+TGG + tig0031948:9900-9919 Msa1447910:intron 50.0%
TTCATGCAGTCAGCCCTTAC+TGG + tig0031948:10186-10205 Msa1447910:intron 50.0%
AGGTAGGGACTCTCCAGTAA+GGG - tig0031948:10202-10221 None:intergenic 50.0%
!! ACTGGTGACGAGGTCTTTTC+AGG + tig0031948:10234-10253 Msa1447910:CDS 50.0%
TGTATGAACGGTGCTCCACA+GGG - tig0031948:10708-10727 None:intergenic 50.0%
!! TGTGGAGCACCGTTCATACA+GGG + tig0031948:10708-10727 Msa1447910:CDS 50.0%
AGAAAGGCGATGGGATCCAA+TGG - tig0031948:10812-10831 None:intergenic 50.0%
AACCTGCTGAGAAAGGCGAT+GGG - tig0031948:10821-10840 None:intergenic 50.0%
AAACCTGCTGAGAAAGGCGA+TGG - tig0031948:10822-10841 None:intergenic 50.0%
CCCTCACAAACCAGCACTAT+TGG + tig0031948:11823-11842 Msa1447910:intron 50.0%
!! CCCAATAGTGCTGGTTTGTG+AGG - tig0031948:11827-11846 None:intergenic 50.0%
CAAACCAGCACTATTGGGCT+TGG + tig0031948:11829-11848 Msa1447910:intron 50.0%
!! GACATAAATGGTGGGTGACC+AGG + tig0031948:11858-11877 Msa1447910:intron 50.0%
!! AAATGGTGGGTGACCAGGAA+AGG + tig0031948:11863-11882 Msa1447910:intron 50.0%
CCATTGAACCACCTGCTATC+AGG - tig0031948:11892-11911 None:intergenic 50.0%
CCTGATAGCAGGTGGTTCAA+TGG + tig0031948:11889-11908 Msa1447910:intron 50.0%
CCATTGAACCACCTGCTATC+AGG - tig0031948:11892-11911 None:intergenic 50.0%
CCTGATAGCAGGTGGTTCAA+TGG + tig0031948:11889-11908 Msa1447910:intron 50.0%
!! TCTCACAAAACCGGCTTGTG+AGG + tig0031948:12026-12045 Msa1447910:intron 50.0%
GTTCCACATCGGATAGGAGA+TGG - tig0031948:12087-12106 None:intergenic 50.0%
! ATTGCCATCTGGAACTGCTC+AGG + tig0031948:12185-12204 Msa1447910:intron 50.0%
TATGCTCGCTGATCCAAAGG+AGG + tig0031948:12664-12683 Msa1447910:CDS 50.0%
GCACGTGCCTGTAGAGAAAA+AGG - tig0031948:12783-12802 None:intergenic 50.0%
CGTTTGCCTACGGGATTGAA+TGG - tig0031948:12831-12850 None:intergenic 50.0%
AAGGGGATTGCGATCTCTTG+CGG + tig0031948:13259-13278 Msa1447910:CDS 50.0%
AAAACGTCCAAGGACCTCCA+GGG - tig0031948:13960-13979 None:intergenic 50.0%
TCAGCACTATCGTGTCTTGG+TGG - tig0031948:14006-14025 None:intergenic 50.0%
GTCTCAGCACTATCGTGTCT+TGG - tig0031948:14009-14028 None:intergenic 50.0%
TGTCAATGCAGGGGATCAGT+TGG + tig0031948:14306-14325 Msa1447910:intron 50.0%
! GAAAAGGCAGATGGCTTTGC+TGG + tig0031948:14445-14464 Msa1447910:CDS 50.0%
GGCTTTGCTGGTGTATTTCC+TGG + tig0031948:14457-14476 Msa1447910:CDS 50.0%
TGTCCGCTTTCTTCAATGCC+GGG - tig0031948:14958-14977 None:intergenic 50.0%
! TGGTCATTTCTGGAGAGACC+TGG + tig0031948:16104-16123 Msa1447910:CDS 50.0%
ATGCCTTGAGTGGAGAAGCA+TGG + tig0031948:16431-16450 Msa1447910:CDS 50.0%
GGAAGATAGGGCAGCAAAGT+GGG + tig0031948:16605-16624 Msa1447910:CDS 50.0%
CTTTCTCAGGGAAGTCTGCA+AGG + tig0031948:16630-16649 Msa1447910:CDS 50.0%
GGACTGAATCAGATGACCTC+AGG + tig0031948:16651-16670 Msa1447910:CDS 50.0%
GAATCAGATGACCTCAGGCT+TGG + tig0031948:16656-16675 Msa1447910:CDS 50.0%
! GGCTATTTCAGCACGTCTTC+TGG - tig0031948:16721-16740 None:intergenic 50.0%
GAAGACGTGCTGAAATAGCC+AGG + tig0031948:16721-16740 Msa1447910:CDS 50.0%
!! CAGCTTTAAGTGGGGGATCA+AGG - tig0031948:16854-16873 None:intergenic 50.0%
TCGTCGGATGGAAGTCCTCT+CGG - tig0031948:9289-9308 None:intergenic 55.0%
AAGTCGGGCTTCAGCATCGT+CGG - tig0031948:9305-9324 None:intergenic 55.0%
!! TACTGACTCCGCCATTGGCA+AGG - tig0031948:9558-9577 None:intergenic 55.0%
TTCAGGAGGACGGTCCTGAT+TGG + tig0031948:9649-9668 Msa1447910:intron 55.0%
TCAAGCAAGCGAGCATCAGC+TGG - tig0031948:9992-10011 None:intergenic 55.0%
GCTGATGCTCGCTTGCTTGA+AGG + tig0031948:9992-10011 Msa1447910:CDS 55.0%
CAGGTAGGGACTCTCCAGTA+AGG - tig0031948:10203-10222 None:intergenic 55.0%
CTGTATGAACGGTGCTCCAC+AGG - tig0031948:10709-10728 None:intergenic 55.0%
!! CTGTGGAGCACCGTTCATAC+AGG + tig0031948:10707-10726 Msa1447910:CDS 55.0%
! GAGCACCGTTCATACAGGGA+TGG + tig0031948:10712-10731 Msa1447910:CDS 55.0%
ATCCCATCGCCTTTCTCAGC+AGG + tig0031948:10816-10835 Msa1447910:CDS 55.0%
CGAACCAAGCCCAATAGTGC+TGG - tig0031948:11836-11855 None:intergenic 55.0%
! GCACTATTGGGCTTGGTTCG+TGG + tig0031948:11836-11855 Msa1447910:intron 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG + tig0031948:12031-12050 Msa1447910:intron 55.0%
GCAATCCTCACCTCACAAGC+CGG - tig0031948:12039-12058 None:intergenic 55.0%
AGGCCATCTCCTATCCGATG+TGG + tig0031948:12081-12100 Msa1447910:intron 55.0%
CTCACCTGAGCAGTTCCAGA+TGG - tig0031948:12192-12211 None:intergenic 55.0%
CTGTTCTGGTGCTCCTTTGC+TGG - tig0031948:12898-12917 None:intergenic 55.0%
!! CAGCAAAGGAGCACCAGAAC+AGG + tig0031948:12896-12915 Msa1447910:CDS 55.0%
! GAAGGGTGAAAGCACGTGAG+TGG - tig0031948:13669-13688 None:intergenic 55.0%
CAAAACGTCCAAGGACCTCC+AGG - tig0031948:13961-13980 None:intergenic 55.0%
! GGAGGTCCTTGGACGTTTTG+TGG + tig0031948:13961-13980 Msa1447910:CDS 55.0%
AAGGAGACGGGCAGAAGACT+TGG + tig0031948:14337-14356 Msa1447910:CDS 55.0%
ACGGGCAGAAGACTTGGCAT+GGG + tig0031948:14343-14362 Msa1447910:CDS 55.0%
! TGCCCCGGCATTGAAGAAAG+CGG + tig0031948:14952-14971 Msa1447910:CDS 55.0%
GTCCGCTTTCTTCAATGCCG+GGG - tig0031948:14957-14976 None:intergenic 55.0%
! CTTCCAACTGTCGGGTGTTG+GGG - tig0031948:15774-15793 None:intergenic 55.0%
GCTTCCAACTGTCGGGTGTT+GGG - tig0031948:15775-15794 None:intergenic 55.0%
AGCTTCCAACTGTCGGGTGT+TGG - tig0031948:15776-15795 None:intergenic 55.0%
TCAGGCAGCTTCCAACTGTC+GGG - tig0031948:15782-15801 None:intergenic 55.0%
CTCAGGCAGCTTCCAACTGT+CGG - tig0031948:15783-15802 None:intergenic 55.0%
CGACTACTGCCCAGTAGAAG+AGG - tig0031948:15856-15875 None:intergenic 55.0%
TTGTTACTCGCAGCCGTGGT+TGG + tig0031948:16084-16103 Msa1447910:CDS 55.0%
! CAGCCGTGGTTGGTCATTTC+TGG + tig0031948:16094-16113 Msa1447910:CDS 55.0%
GCGCACATCAGTAAAGCTCC+AGG - tig0031948:16125-16144 None:intergenic 55.0%
TTCGAGGGATTGGATGGGGA+TGG + tig0031948:16338-16357 Msa1447910:CDS 55.0%
TCGAGGGATTGGATGGGGAT+GGG + tig0031948:16339-16358 Msa1447910:CDS 55.0%
!! GGGGATGGGCTGGTGTTATA+TGG + tig0031948:16353-16372 Msa1447910:CDS 55.0%
ACAGTGCGCTATGCCTTGAG+TGG + tig0031948:16421-16440 Msa1447910:CDS 55.0%
CGGAAGATAGGGCAGCAAAG+TGG + tig0031948:16604-16623 Msa1447910:CDS 55.0%
TCAGATGACCTCAGGCTTGG+AGG + tig0031948:16659-16678 Msa1447910:CDS 55.0%
!! GTGGGGGATCAAGGGTGTTA+TGG - tig0031948:16845-16864 None:intergenic 55.0%
GGGCTGATTGGATTGCCTTC+AGG - tig0031948:17002-17021 None:intergenic 55.0%
GGCAGCTAGGGCAGCAAGAT+TGG + tig0031948:12607-12626 Msa1447910:CDS 60.0%
AGGATAGCCCTGGAGGTCCT+TGG + tig0031948:13950-13969 Msa1447910:CDS 60.0%
GACGGGCAGAAGACTTGGCA+TGG + tig0031948:14342-14361 Msa1447910:CDS 60.0%
CGGGCAGAAGACTTGGCATG+GGG + tig0031948:14344-14363 Msa1447910:CDS 60.0%
!! CAACTGTCGGGTGTTGGGGA+TGG - tig0031948:15770-15789 None:intergenic 60.0%
CATCCCCAACACCCGACAGT+TGG + tig0031948:15768-15787 Msa1447910:CDS 60.0%
ACCTCAGGCTTGGAGGTCAG+TGG + tig0031948:16666-16685 Msa1447910:CDS 60.0%
TCCACTGACCTCCAAGCCTG+AGG - tig0031948:16670-16689 None:intergenic 60.0%
CAGGCTTGGAGGTCAGTGGA+AGG + tig0031948:16670-16689 Msa1447910:CDS 60.0%
GCTTGGAGGTCAGTGGAAGG+CGG + tig0031948:16673-16692 Msa1447910:CDS 60.0%
GGGGAGTTGCACACACTCAG+AGG + tig0031948:16940-16959 Msa1447910:CDS 60.0%
CGGGCTTCAGCATCGTCGGA+TGG - tig0031948:9301-9320 None:intergenic 65.0%
GGGATTGGATGGGGATGGGC+TGG + tig0031948:16343-16362 Msa1447910:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0031948 gene 9102 17032 9102 ID=Msa1447910;Name=Msa1447910
tig0031948 mRNA 9102 17032 9102 ID=Msa1447910-mRNA-1;Parent=Msa1447910;Name=Msa1447910-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.05|0|1|1|1|20|0|931
tig0031948 exon 9102 9170 9102 ID=Msa1447910-mRNA-1:exon:16130;Parent=Msa1447910-mRNA-1
tig0031948 exon 9241 9360 9241 ID=Msa1447910-mRNA-1:exon:16131;Parent=Msa1447910-mRNA-1
tig0031948 exon 9472 9570 9472 ID=Msa1447910-mRNA-1:exon:16132;Parent=Msa1447910-mRNA-1
tig0031948 exon 9654 9791 9654 ID=Msa1447910-mRNA-1:exon:16133;Parent=Msa1447910-mRNA-1
tig0031948 exon 9902 10040 9902 ID=Msa1447910-mRNA-1:exon:16134;Parent=Msa1447910-mRNA-1
tig0031948 exon 10199 10374 10199 ID=Msa1447910-mRNA-1:exon:16135;Parent=Msa1447910-mRNA-1
tig0031948 exon 10631 10837 10631 ID=Msa1447910-mRNA-1:exon:16136;Parent=Msa1447910-mRNA-1
tig0031948 exon 11148 11267 11148 ID=Msa1447910-mRNA-1:exon:16137;Parent=Msa1447910-mRNA-1
tig0031948 exon 12566 12685 12566 ID=Msa1447910-mRNA-1:exon:16138;Parent=Msa1447910-mRNA-1
tig0031948 exon 12795 12917 12795 ID=Msa1447910-mRNA-1:exon:16139;Parent=Msa1447910-mRNA-1
tig0031948 exon 13188 13292 13188 ID=Msa1447910-mRNA-1:exon:16140;Parent=Msa1447910-mRNA-1
tig0031948 exon 13931 14075 13931 ID=Msa1447910-mRNA-1:exon:16141;Parent=Msa1447910-mRNA-1
tig0031948 exon 14317 14478 14317 ID=Msa1447910-mRNA-1:exon:16142;Parent=Msa1447910-mRNA-1
tig0031948 exon 14909 15114 14909 ID=Msa1447910-mRNA-1:exon:16143;Parent=Msa1447910-mRNA-1
tig0031948 exon 15480 15561 15480 ID=Msa1447910-mRNA-1:exon:16144;Parent=Msa1447910-mRNA-1
tig0031948 exon 15732 15892 15732 ID=Msa1447910-mRNA-1:exon:16145;Parent=Msa1447910-mRNA-1
tig0031948 exon 15990 16163 15990 ID=Msa1447910-mRNA-1:exon:16146;Parent=Msa1447910-mRNA-1
tig0031948 exon 16292 16474 16292 ID=Msa1447910-mRNA-1:exon:16147;Parent=Msa1447910-mRNA-1
tig0031948 exon 16573 16742 16573 ID=Msa1447910-mRNA-1:exon:16148;Parent=Msa1447910-mRNA-1
tig0031948 exon 16936 17032 16936 ID=Msa1447910-mRNA-1:exon:16149;Parent=Msa1447910-mRNA-1
tig0031948 CDS 9102 9170 9102 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 9241 9360 9241 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 9472 9570 9472 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 9654 9791 9654 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 9902 10040 9902 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 10199 10374 10199 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 10631 10837 10631 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 11148 11267 11148 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 12566 12685 12566 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 12795 12917 12795 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 13188 13292 13188 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 13931 14075 13931 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 14317 14478 14317 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 14909 15114 14909 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 15480 15561 15480 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 15732 15892 15732 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 15990 16163 15990 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 16292 16474 16292 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 16573 16742 16573 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
tig0031948 CDS 16936 17032 16936 ID=Msa1447910-mRNA-1:cds;Parent=Msa1447910-mRNA-1
Gene Sequence

>Msa1447910

ATGGCTGAGGAGGAACTGGATAAACCTTTGCTTGATCCTGACAATTTCAACCGAGAGGGCATTGATTTGGAGCGCATACCACTAGAACAAGTTTTCGAACTGTTGAAAACATCACCGAGAGGACTTCCATCCGACGATGCTGAAGCCCGACTTCACATATTTGGCCCAAACAAACTCGAAGAGAGGAAAGAGAACAAAATATTGAAGTTTCTTAGCTTTATGTGGAATCCTCTTTCATGGGTTATGGAAGCAGCAGCATTGATGGCAATTGTCCTTGCCAATGGCGGAGAGGACGGTCCTGATTGGCAAGACTTTGTAGGGATTATATGCTTACTGGTAATAAACTCAACAATTAGTTTTATAGAAGAAAATAATGCTGGTACTGCTGCAGCAGCACTAATGGCTCGCTTAGCTCCTCGAACAAAGGTTCTAAGAGATGGTCGGTGGCAAGAAGATGATGCAGCTATTTTAGTACCTGGGGATATAATCAGCATAAAGCTAGGAGATATCATTCCAGCTGATGCTCGCTTGCTTGAAGGAGACCCTCTCAAAATTGACCAGGCAACCCTTACTGGAGAGTCCCTACCTGTCACAAAAAAAACTGGTGACGAGGTCTTTTCAGGTTCAACGTGTAAACACGGAGAGATTGAAGCTGTAGTGATAGCAACAGGGATTCATTCCTTTTTTGGAAAAGCAGCACACTTGGTTGACAGTACCGAAGTTGTTGGACATTTTCAGAAGGTTCTTACCTCAATTGGTAACTTCTGCATTTGCTCAATAGCTATAGGGATGATTCTTGAAATAATTATAATGTTCCCTGTGGAGCACCGTTCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTGATTGGAGGAATTCCCATAGCTATGCCAACAGTATTATCTGTAACACTTGCCATTGGATCCCATCGCCTTTCTCAGCAGGGAGCTATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACGGGTACTCTTACGCTTAATCGCCTGTCTGTTGATCGGAATCTTATAGAGGTCTTTAACAGCAATATGAACAAAGATATGATTGTTCTACTGGCAGCTAGGGCAGCAAGATTGGAAAATCAGGATGCCATTGATGCTGCCATCGTTAATATGCTCGCTGATCCAAAGGAGGCACGTGCAAACATAACTGAAGTTCATTTTCTACCATTCAATCCCGTAGGCAAACGTACAGCTATAACATACATCGATTCTGATGGCAACTTTTACAGGGCCAGCAAAGGAGCACCAGAACAGATTCTAAATATGTGCCAAGACAAAGACACGATTTCCAGAAAAGTGCATACAATCATAGACAAATTTGCTGAAAGGGGATTGCGATCTCTTGCGGTTGCTTTTCAGGAAGTACCTGAAAAATCAAAGGATAGCCCTGGAGGTCCTTGGACGTTTTGTGGTTTGTTGCCTTTGTTTGATCCACCAAGACACGATAGTGCTGAGACCATCCGAAGAGCACTTAACCTTGGTGTTTGTGTTAAGATGATTACAGGGGATCAGTTGGCTATTGCAAAGGAGACGGGCAGAAGACTTGGCATGGGGACAAATATGTACCCTTCTTCATCTTTGTTGGGTCGCGACAAAGATGAGAATGAAGCTCTCCCAGTAGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAAAAACAACATGTTGTTGGAATGACTGGAGATGGAGTAAATGATGCCCCGGCATTGAAGAAAGCGGACATTGGAATAGCTGTGTCTGATGCTACAGATGCCGCAAGAAGTGCTGCTGATATAGTCTTAACTGAGCCTGGCTTAAGTGTTATTATCAGCGCTGTGTTAACTAGCCGAGCTATATTTCAAAGGATGAAAAATTATACACTTGGTTTTGTTCTCCTAGCATCAATCTGGAAGTATGATTTTCCACCCTTCATGGTCTTGATCATTGCAATCCTAAATGATGGGACTATCATGACCATAGCTAAAGACAGAGTAAGGCCATCCCCAACACCCGACAGTTGGAAGCTGCCTGAGATATTTGCAACAGGAGTAGTGATTGGGACTTACCTTGCTTTGGTTACTGTCCTCTTCTACTGGGCAGTAGTCGAGACCACTTTCTTTGAGACCCACTTCCATGTAACCACCTTATCTAGTGACAGTGAGAAAGTTTCGTCAGCTGTATATCTGCAAGTTAGCATCATTAGCCAGGCTCTAATTTTTGTTACTCGCAGCCGTGGTTGGTCATTTCTGGAGAGACCTGGAGCTTTACTGATGTGCGCCTTTATAATAGCTCAGCTGGTGGCCACCTTGATTGCAGTTTATGCAAATATCAGTTTTGCTAAAATTCGAGGGATTGGATGGGGATGGGCTGGTGTTATATGGTTGTTCAGTTTAATCTTCTATGTACCCTTGGACATCATCAAGTTCACAGTGCGCTATGCCTTGAGTGGAGAAGCATGGAATCTCCTATTTGACAGAAAGACTGCTTTTACATCTAAGAAAGACTATGGGACGGAAGATAGGGCAGCAAAGTGGGTTCTTTCTCAGGGAAGTCTGCAAGGACTGAATCAGATGACCTCAGGCTTGGAGGTCAGTGGAAGGCGGTCTTCTATGATAGCTGAACAGGCCAGAAGACGTGCTGAAATAGCCAGGCTGGGGGAGTTGCACACACTCAGAGGACATGTAGAATCTGTTTTGAGACTCAAAAATGTAGACCTGAAGGCAATCCAATCAGCCCATACAGTCTGA
Protein sequence

>Msa1447910

MAEEELDKPLLDPDNFNREGIDLERIPLEQVFELLKTSPRGLPSDDAEARLHIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIVLANGGEDGPDWQDFVGIICLLVINSTISFIEENNAGTAAAALMARLAPRTKVLRDGRWQEDDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQATLTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGIHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAIGMILEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRNLIEVFNSNMNKDMIVLLAARAARLENQDAIDAAIVNMLADPKEARANITEVHFLPFNPVGKRTAITYIDSDGNFYRASKGAPEQILNMCQDKDTISRKVHTIIDKFAERGLRSLAVAFQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDENEALPVDELIEKADGFAGVFPEKQHVVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFVLLASIWKYDFPPFMVLIIAILNDGTIMTIAKDRVRPSPTPDSWKLPEIFATGVVIGTYLALVTVLFYWAVVETTFFETHFHVTTLSSDSEKVSSAVYLQVSIISQALIFVTRSRGWSFLERPGALLMCAFIIAQLVATLIAVYANISFAKIRGIGWGWAGVIWLFSLIFYVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGTEDRAAKWVLSQGSLQGLNQMTSGLEVSGRRSSMIAEQARRRAEIARLGELHTLRGHVESVLRLKNVDLKAIQSAHTV*