Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1452220 | sp|Q0PCS3|CHR25_ARATH | 68.281 | 826 | 234 | 10 | 21 | 833 | 38 | 848 | 0.0 | 1135 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1452220 | A0A072UN86 | 93.129 | 946 | 47 | 5 | 1 | 929 | 1 | 945 | 0.0 | 1779 |
Gene ID | Type | Classification |
---|---|---|
Msa1452220 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1360080 | Msa1452220 | 0.830888 | 2.278963e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1452220 | MtrunA17_Chr5g0393461 | 93.129 | 946 | 47 | 5 | 1 | 929 | 1 | 945 | 0.0 | 1779 |
Msa1452220 | MtrunA17_Chr4g0040301 | 30.280 | 535 | 305 | 12 | 190 | 670 | 6 | 526 | 6.63e-64 | 229 |
Msa1452220 | MtrunA17_Chr5g0394201 | 33.753 | 477 | 265 | 12 | 202 | 672 | 391 | 822 | 7.32e-64 | 234 |
Msa1452220 | MtrunA17_Chr1g0205891 | 32.704 | 477 | 271 | 12 | 202 | 672 | 404 | 836 | 2.39e-63 | 233 |
Msa1452220 | MtrunA17_Chr1g0183681 | 28.961 | 587 | 324 | 13 | 202 | 743 | 419 | 957 | 7.68e-63 | 231 |
Msa1452220 | MtrunA17_Chr8g0384531 | 29.811 | 530 | 311 | 14 | 202 | 700 | 412 | 911 | 5.33e-61 | 225 |
Msa1452220 | MtrunA17_Chr5g0403921 | 30.105 | 475 | 295 | 7 | 202 | 671 | 212 | 654 | 5.94e-60 | 218 |
Msa1452220 | MtrunA17_Chr4g0066741 | 32.427 | 478 | 259 | 15 | 202 | 671 | 216 | 637 | 6.75e-59 | 219 |
Msa1452220 | MtrunA17_Chr4g0066651 | 32.008 | 503 | 289 | 14 | 202 | 695 | 1017 | 1475 | 9.99e-58 | 217 |
Msa1452220 | MtrunA17_Chr5g0442141 | 30.196 | 510 | 302 | 14 | 202 | 697 | 645 | 1114 | 2.66e-57 | 215 |
Msa1452220 | MtrunA17_Chr3g0095091 | 30.469 | 512 | 303 | 13 | 202 | 705 | 599 | 1065 | 6.59e-57 | 214 |
Msa1452220 | MtrunA17_Chr2g0286291 | 32.292 | 480 | 257 | 15 | 202 | 671 | 219 | 640 | 1.84e-55 | 208 |
Msa1452220 | MtrunA17_Chr3g0137091 | 27.664 | 488 | 290 | 8 | 202 | 671 | 317 | 759 | 4.14e-53 | 202 |
Msa1452220 | MtrunA17_Chr8g0348721 | 32.112 | 464 | 250 | 14 | 202 | 644 | 1015 | 1434 | 1.77e-52 | 201 |
Msa1452220 | MtrunA17_Chr7g0248031 | 31.887 | 461 | 256 | 12 | 202 | 644 | 1022 | 1442 | 7.00e-52 | 199 |
Msa1452220 | MtrunA17_Chr4g0017211 | 28.276 | 580 | 350 | 15 | 202 | 748 | 1478 | 2024 | 1.03e-49 | 192 |
Msa1452220 | MtrunA17_Chr4g0052341 | 28.958 | 480 | 278 | 14 | 202 | 667 | 773 | 1203 | 1.34e-48 | 188 |
Msa1452220 | MtrunA17_Chr1g0163011 | 30.402 | 523 | 282 | 16 | 202 | 671 | 224 | 717 | 9.65e-48 | 182 |
Msa1452220 | MtrunA17_Chr1g0190381 | 32.902 | 386 | 187 | 13 | 371 | 700 | 4 | 373 | 2.97e-43 | 166 |
Msa1452220 | MtrunA17_Chr7g0232121 | 27.841 | 528 | 304 | 18 | 202 | 696 | 67 | 550 | 1.19e-40 | 161 |
Msa1452220 | MtrunA17_Chr1g0175191 | 29.513 | 349 | 211 | 12 | 156 | 494 | 499 | 822 | 1.26e-30 | 130 |
Msa1452220 | MtrunA17_Chr1g0175191 | 38.667 | 150 | 90 | 2 | 522 | 671 | 1062 | 1209 | 8.58e-27 | 118 |
Msa1452220 | MtrunA17_Chr7g0233001 | 23.878 | 490 | 302 | 10 | 231 | 676 | 17 | 479 | 1.62e-29 | 124 |
Msa1452220 | MtrunA17_Chr7g0225791 | 23.708 | 561 | 322 | 16 | 202 | 696 | 758 | 1278 | 3.72e-29 | 125 |
Msa1452220 | MtrunA17_Chr7g0257101 | 34.061 | 229 | 140 | 5 | 521 | 749 | 1191 | 1408 | 7.81e-28 | 121 |
Msa1452220 | MtrunA17_Chr7g0257101 | 27.304 | 293 | 178 | 7 | 202 | 477 | 606 | 880 | 2.63e-24 | 110 |
Msa1452220 | MtrunA17_Chr7g0232971 | 24.482 | 531 | 309 | 15 | 202 | 676 | 762 | 1256 | 6.40e-27 | 118 |
Msa1452220 | MtrunA17_Chr4g0047081 | 23.608 | 521 | 318 | 12 | 202 | 676 | 708 | 1194 | 1.82e-26 | 117 |
Msa1452220 | MtrunA17_Chr7g0233021 | 25.660 | 530 | 303 | 17 | 202 | 676 | 697 | 1190 | 5.89e-26 | 115 |
Msa1452220 | MtrunA17_Chr1g0191141 | 24.205 | 566 | 338 | 23 | 202 | 709 | 563 | 1095 | 4.65e-24 | 109 |
Msa1452220 | MtrunA17_Chr1g0168031 | 35.227 | 176 | 107 | 3 | 521 | 696 | 985 | 1153 | 5.36e-23 | 105 |
Msa1452220 | MtrunA17_Chr1g0190391 | 34.426 | 183 | 98 | 5 | 202 | 368 | 620 | 796 | 1.10e-22 | 104 |
Msa1452220 | MtrunA17_Chr8g0352361 | 23.904 | 502 | 307 | 14 | 202 | 670 | 391 | 850 | 2.45e-22 | 103 |
Msa1452220 | MtrunA17_Chr2g0296421 | 23.600 | 500 | 310 | 16 | 202 | 670 | 541 | 999 | 9.01e-22 | 102 |
Msa1452220 | MtrunA17_Chr7g0231521 | 27.626 | 257 | 143 | 7 | 454 | 696 | 244 | 471 | 3.88e-21 | 99.4 |
Msa1452220 | MtrunA17_Chr7g0231521 | 30.978 | 184 | 104 | 7 | 202 | 372 | 67 | 240 | 2.83e-14 | 77.4 |
Msa1452220 | MtrunA17_Chr2g0320751 | 36.111 | 180 | 106 | 5 | 517 | 696 | 846 | 1016 | 7.76e-20 | 95.5 |
Msa1452220 | MtrunA17_Chr2g0320751 | 22.464 | 276 | 156 | 7 | 231 | 477 | 480 | 726 | 3.15e-11 | 67.8 |
Msa1452220 | MtrunA17_Chr7g0232991 | 37.143 | 105 | 66 | 0 | 567 | 671 | 509 | 613 | 5.37e-17 | 85.9 |
Msa1452220 | MtrunA17_Chr7g0224051 | 30.000 | 180 | 113 | 4 | 539 | 709 | 934 | 1109 | 6.97e-17 | 86.3 |
Msa1452220 | MtrunA17_Chr2g0320781 | 42.045 | 88 | 51 | 0 | 578 | 665 | 153 | 240 | 9.37e-17 | 80.9 |
Msa1452220 | MtrunA17_Chr4g0069451 | 23.732 | 493 | 290 | 20 | 202 | 676 | 199 | 623 | 2.37e-16 | 84.0 |
Msa1452220 | MtrunA17_Chr7g0255821 | 34.667 | 150 | 96 | 2 | 518 | 665 | 644 | 793 | 2.45e-16 | 84.0 |
Msa1452220 | MtrunA17_Chr4g0024921 | 32.402 | 179 | 115 | 4 | 519 | 696 | 761 | 934 | 5.96e-16 | 82.8 |
Msa1452220 | MtrunA17_Chr3g0114161 | 33.566 | 143 | 91 | 2 | 569 | 709 | 1100 | 1240 | 9.70e-16 | 82.4 |
Msa1452220 | MtrunA17_Chr7g0233031 | 36.893 | 103 | 65 | 0 | 575 | 677 | 1102 | 1204 | 5.23e-15 | 80.1 |
Msa1452220 | MtrunA17_Chr5g0437621 | 26.131 | 199 | 136 | 4 | 518 | 709 | 1102 | 1296 | 5.49e-15 | 80.1 |
Msa1452220 | MtrunA17_Chr1g0212331 | 31.410 | 156 | 102 | 3 | 541 | 695 | 887 | 1038 | 1.08e-14 | 79.0 |
Msa1452220 | MtrunA17_Chr2g0281601 | 28.846 | 156 | 108 | 2 | 540 | 695 | 1149 | 1301 | 2.39e-13 | 74.7 |
Msa1452220 | MtrunA17_Chr5g0428401 | 32.558 | 129 | 79 | 2 | 539 | 659 | 1493 | 1621 | 9.25e-12 | 69.7 |
Msa1452220 | MtrunA17_Chr2g0326991 | 29.565 | 115 | 79 | 1 | 545 | 657 | 35 | 149 | 5.95e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1452220 | AT3G19210.1 | 68.281 | 826 | 234 | 10 | 21 | 833 | 38 | 848 | 0.0 | 1135 |
Msa1452220 | AT3G19210.2 | 67.191 | 826 | 241 | 11 | 21 | 833 | 38 | 846 | 0.0 | 1109 |
Msa1452220 | AT3G19210.3 | 68.568 | 754 | 210 | 9 | 21 | 762 | 38 | 776 | 0.0 | 1039 |
Msa1452220 | AT1G08600.4 | 33.631 | 559 | 296 | 18 | 202 | 700 | 757 | 1300 | 1.60e-75 | 271 |
Msa1452220 | AT1G08600.3 | 33.631 | 559 | 296 | 18 | 202 | 700 | 757 | 1300 | 1.60e-75 | 271 |
Msa1452220 | AT1G08600.2 | 33.631 | 559 | 296 | 18 | 202 | 700 | 757 | 1300 | 1.60e-75 | 271 |
Msa1452220 | AT1G08600.1 | 32.849 | 551 | 290 | 17 | 202 | 700 | 757 | 1279 | 6.56e-73 | 263 |
Msa1452220 | AT2G18760.3 | 30.556 | 576 | 306 | 17 | 171 | 700 | 430 | 957 | 3.99e-68 | 248 |
Msa1452220 | AT2G18760.4 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
Msa1452220 | AT2G18760.1 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
Msa1452220 | AT2G18760.2 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
Msa1452220 | AT2G18760.7 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
Msa1452220 | AT2G18760.5 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
Msa1452220 | AT2G18760.6 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
Msa1452220 | AT1G03750.1 | 31.274 | 518 | 297 | 13 | 202 | 670 | 167 | 674 | 8.06e-65 | 235 |
Msa1452220 | AT3G06010.1 | 33.684 | 475 | 269 | 12 | 202 | 672 | 431 | 863 | 5.82e-63 | 232 |
Msa1452220 | AT5G19310.2 | 32.887 | 523 | 297 | 18 | 202 | 715 | 150 | 627 | 3.59e-61 | 223 |
Msa1452220 | AT5G19310.1 | 32.567 | 522 | 300 | 17 | 202 | 715 | 414 | 891 | 6.51e-60 | 223 |
Msa1452220 | AT2G13370.1 | 30.753 | 478 | 280 | 11 | 202 | 671 | 653 | 1087 | 6.85e-58 | 218 |
Msa1452220 | AT2G13370.2 | 30.753 | 478 | 280 | 11 | 202 | 671 | 653 | 1087 | 6.85e-58 | 218 |
Msa1452220 | AT2G13370.3 | 30.753 | 478 | 280 | 11 | 202 | 671 | 653 | 1087 | 6.85e-58 | 218 |
Msa1452220 | AT5G63950.1 | 29.314 | 539 | 295 | 14 | 202 | 697 | 405 | 900 | 9.23e-57 | 213 |
Msa1452220 | AT5G63950.2 | 29.446 | 523 | 298 | 12 | 202 | 697 | 405 | 883 | 1.01e-56 | 213 |
Msa1452220 | AT3G06400.2 | 32.558 | 473 | 265 | 14 | 202 | 671 | 217 | 638 | 5.26e-56 | 211 |
Msa1452220 | AT3G06400.3 | 32.558 | 473 | 265 | 14 | 202 | 671 | 217 | 638 | 5.28e-56 | 211 |
Msa1452220 | AT3G06400.1 | 32.558 | 473 | 265 | 14 | 202 | 671 | 217 | 638 | 5.79e-56 | 210 |
Msa1452220 | AT5G18620.1 | 31.667 | 480 | 260 | 15 | 202 | 671 | 222 | 643 | 1.06e-54 | 206 |
Msa1452220 | AT5G18620.2 | 31.667 | 480 | 260 | 15 | 202 | 671 | 222 | 643 | 1.25e-54 | 206 |
Msa1452220 | AT2G28290.1 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 7.02e-53 | 202 |
Msa1452220 | AT2G28290.5 | 31.290 | 473 | 281 | 11 | 202 | 667 | 783 | 1218 | 7.40e-53 | 202 |
Msa1452220 | AT2G28290.3 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 8.00e-53 | 202 |
Msa1452220 | AT2G28290.4 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 8.00e-53 | 202 |
Msa1452220 | AT2G28290.6 | 31.290 | 473 | 281 | 11 | 202 | 667 | 783 | 1218 | 8.97e-53 | 202 |
Msa1452220 | AT2G28290.2 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 9.45e-53 | 202 |
Msa1452220 | AT3G54280.1 | 28.705 | 533 | 322 | 13 | 202 | 699 | 1479 | 1988 | 6.42e-52 | 199 |
Msa1452220 | AT3G54280.2 | 28.705 | 533 | 322 | 13 | 202 | 699 | 1510 | 2019 | 6.51e-52 | 199 |
Msa1452220 | AT2G25170.2 | 27.959 | 490 | 286 | 9 | 202 | 671 | 318 | 760 | 1.56e-51 | 197 |
Msa1452220 | AT2G25170.1 | 27.959 | 490 | 286 | 9 | 202 | 671 | 301 | 743 | 1.68e-51 | 197 |
Msa1452220 | AT2G25170.4 | 27.959 | 490 | 286 | 9 | 202 | 671 | 301 | 743 | 1.68e-51 | 197 |
Msa1452220 | AT2G25170.3 | 27.959 | 490 | 286 | 9 | 202 | 671 | 327 | 769 | 1.69e-51 | 197 |
Msa1452220 | AT5G66750.1 | 27.593 | 511 | 331 | 8 | 202 | 705 | 230 | 708 | 2.49e-51 | 194 |
Msa1452220 | AT4G31900.3 | 29.019 | 479 | 282 | 12 | 202 | 676 | 253 | 677 | 2.53e-51 | 196 |
Msa1452220 | AT2G46020.2 | 31.522 | 460 | 259 | 12 | 202 | 644 | 1009 | 1429 | 3.00e-51 | 197 |
Msa1452220 | AT2G46020.3 | 31.522 | 460 | 259 | 12 | 202 | 644 | 1009 | 1429 | 3.00e-51 | 197 |
Msa1452220 | AT2G46020.4 | 31.522 | 460 | 259 | 12 | 202 | 644 | 1009 | 1429 | 3.00e-51 | 197 |
Msa1452220 | AT4G31900.1 | 29.019 | 479 | 282 | 12 | 202 | 676 | 253 | 677 | 3.31e-51 | 196 |
Msa1452220 | AT4G31900.2 | 29.019 | 479 | 282 | 12 | 202 | 676 | 212 | 636 | 3.87e-51 | 196 |
Msa1452220 | AT2G46020.5 | 30.652 | 460 | 262 | 11 | 202 | 644 | 1009 | 1428 | 7.58e-51 | 196 |
Msa1452220 | AT2G46020.1 | 30.652 | 460 | 262 | 11 | 202 | 644 | 1009 | 1428 | 7.58e-51 | 196 |
Msa1452220 | AT2G46020.6 | 30.652 | 460 | 262 | 11 | 202 | 644 | 1009 | 1428 | 7.58e-51 | 196 |
Msa1452220 | AT2G02090.1 | 31.115 | 511 | 270 | 17 | 202 | 659 | 242 | 723 | 1.49e-47 | 182 |
Msa1452220 | AT5G44800.1 | 27.615 | 478 | 287 | 13 | 202 | 667 | 717 | 1147 | 1.73e-43 | 172 |
Msa1452220 | AT2G44980.1 | 27.632 | 532 | 304 | 19 | 202 | 709 | 80 | 554 | 6.87e-43 | 169 |
Msa1452220 | AT2G44980.2 | 27.757 | 544 | 307 | 20 | 202 | 709 | 80 | 573 | 1.42e-41 | 165 |
Msa1452220 | AT2G44980.3 | 27.757 | 544 | 307 | 20 | 202 | 709 | 79 | 572 | 1.74e-41 | 164 |
Msa1452220 | AT3G12810.2 | 30.303 | 297 | 176 | 8 | 202 | 492 | 560 | 831 | 1.53e-29 | 127 |
Msa1452220 | AT3G12810.2 | 36.994 | 173 | 98 | 3 | 522 | 694 | 1071 | 1232 | 1.89e-25 | 114 |
Msa1452220 | AT3G12810.1 | 30.303 | 297 | 176 | 8 | 202 | 492 | 564 | 835 | 1.64e-29 | 127 |
Msa1452220 | AT3G12810.1 | 36.994 | 173 | 98 | 3 | 522 | 694 | 1075 | 1236 | 2.01e-25 | 114 |
Msa1452220 | AT3G57300.1 | 37.912 | 182 | 106 | 4 | 521 | 701 | 1205 | 1380 | 4.72e-27 | 119 |
Msa1452220 | AT3G57300.1 | 27.273 | 286 | 187 | 7 | 202 | 477 | 614 | 888 | 1.27e-22 | 105 |
Msa1452220 | AT3G57300.4 | 37.912 | 182 | 106 | 4 | 521 | 701 | 1205 | 1380 | 4.72e-27 | 119 |
Msa1452220 | AT3G57300.4 | 27.273 | 286 | 187 | 7 | 202 | 477 | 614 | 888 | 1.27e-22 | 105 |
Msa1452220 | AT3G57300.2 | 37.912 | 182 | 106 | 4 | 521 | 701 | 1238 | 1413 | 4.86e-27 | 119 |
Msa1452220 | AT3G57300.2 | 24.765 | 319 | 186 | 7 | 202 | 477 | 614 | 921 | 6.28e-21 | 99.8 |
Msa1452220 | AT1G02670.6 | 25.753 | 598 | 346 | 23 | 168 | 696 | 95 | 663 | 6.16e-25 | 111 |
Msa1452220 | AT1G02670.3 | 25.753 | 598 | 346 | 23 | 168 | 696 | 122 | 690 | 8.68e-25 | 111 |
Msa1452220 | AT2G21450.2 | 24.803 | 508 | 312 | 13 | 202 | 670 | 302 | 778 | 1.34e-24 | 111 |
Msa1452220 | AT2G21450.1 | 24.803 | 508 | 312 | 13 | 202 | 670 | 295 | 771 | 1.37e-24 | 110 |
Msa1452220 | AT2G21450.3 | 24.803 | 508 | 312 | 14 | 202 | 670 | 204 | 680 | 1.66e-24 | 110 |
Msa1452220 | AT1G05490.1 | 27.013 | 385 | 231 | 10 | 302 | 671 | 1003 | 1352 | 1.84e-24 | 111 |
Msa1452220 | AT3G24340.1 | 23.954 | 526 | 320 | 15 | 201 | 690 | 618 | 1099 | 7.57e-24 | 108 |
Msa1452220 | AT3G42670.2 | 23.468 | 571 | 336 | 19 | 202 | 709 | 715 | 1247 | 1.11e-23 | 108 |
Msa1452220 | AT3G42670.3 | 23.468 | 571 | 336 | 19 | 202 | 709 | 715 | 1247 | 1.11e-23 | 108 |
Msa1452220 | AT3G42670.1 | 23.468 | 571 | 336 | 19 | 202 | 709 | 715 | 1247 | 1.11e-23 | 108 |
Msa1452220 | AT3G42670.4 | 23.468 | 571 | 336 | 19 | 202 | 709 | 717 | 1249 | 1.14e-23 | 108 |
Msa1452220 | AT3G57300.3 | 27.273 | 286 | 187 | 7 | 202 | 477 | 614 | 888 | 1.38e-22 | 105 |
Msa1452220 | AT5G20420.1 | 23.836 | 537 | 309 | 18 | 202 | 675 | 720 | 1219 | 3.16e-22 | 103 |
Msa1452220 | AT5G43530.1 | 34.444 | 180 | 109 | 5 | 517 | 695 | 1105 | 1276 | 1.26e-21 | 102 |
Msa1452220 | AT5G05130.1 | 36.145 | 166 | 95 | 3 | 526 | 680 | 712 | 877 | 8.54e-20 | 95.9 |
Msa1452220 | AT5G22750.1 | 36.813 | 182 | 102 | 6 | 517 | 696 | 859 | 1029 | 1.05e-19 | 95.5 |
Msa1452220 | AT5G22750.1 | 25.086 | 291 | 159 | 11 | 220 | 477 | 475 | 739 | 2.76e-13 | 74.7 |
Msa1452220 | AT1G05120.1 | 33.333 | 180 | 112 | 5 | 519 | 696 | 659 | 832 | 2.53e-16 | 84.3 |
Msa1452220 | AT1G05120.2 | 33.333 | 180 | 112 | 5 | 519 | 696 | 702 | 875 | 2.62e-16 | 84.3 |
Msa1452220 | AT1G02670.7 | 32.768 | 177 | 112 | 4 | 521 | 695 | 495 | 666 | 5.56e-15 | 79.7 |
Msa1452220 | AT1G02670.1 | 34.615 | 156 | 96 | 3 | 541 | 695 | 527 | 677 | 5.75e-15 | 79.7 |
Msa1452220 | AT1G50410.2 | 32.692 | 156 | 100 | 3 | 541 | 695 | 828 | 979 | 1.19e-13 | 75.9 |
Msa1452220 | AT1G50410.1 | 32.692 | 156 | 100 | 3 | 541 | 695 | 828 | 979 | 1.19e-13 | 75.9 |
Msa1452220 | AT1G50410.3 | 32.692 | 156 | 100 | 3 | 541 | 695 | 828 | 979 | 1.19e-13 | 75.9 |
Msa1452220 | AT1G61140.3 | 29.560 | 159 | 109 | 2 | 540 | 698 | 966 | 1121 | 1.35e-13 | 75.9 |
Msa1452220 | AT1G61140.1 | 29.560 | 159 | 109 | 2 | 540 | 698 | 1124 | 1279 | 1.58e-13 | 75.9 |
Msa1452220 | AT3G20010.1 | 30.968 | 155 | 104 | 2 | 541 | 695 | 894 | 1045 | 5.44e-13 | 73.9 |
Msa1452220 | AT3G20010.5 | 30.968 | 155 | 104 | 2 | 541 | 695 | 894 | 1045 | 5.44e-13 | 73.9 |
Msa1452220 | AT3G20010.7 | 30.968 | 155 | 104 | 2 | 541 | 695 | 894 | 1045 | 5.44e-13 | 73.9 |
Msa1452220 | AT3G20010.3 | 30.968 | 155 | 104 | 2 | 541 | 695 | 628 | 779 | 5.71e-13 | 73.6 |
Msa1452220 | AT3G20010.2 | 30.968 | 155 | 104 | 2 | 541 | 695 | 603 | 754 | 6.75e-13 | 73.2 |
Msa1452220 | AT1G11100.5 | 28.205 | 156 | 109 | 2 | 540 | 695 | 929 | 1081 | 7.76e-13 | 73.2 |
Msa1452220 | AT1G11100.5 | 26.642 | 274 | 159 | 9 | 223 | 474 | 486 | 739 | 2.64e-12 | 71.6 |
Msa1452220 | AT1G11100.3 | 28.205 | 156 | 109 | 2 | 540 | 695 | 973 | 1125 | 7.87e-13 | 73.2 |
Msa1452220 | AT1G11100.1 | 28.205 | 156 | 109 | 2 | 540 | 695 | 1072 | 1224 | 8.24e-13 | 73.2 |
Msa1452220 | AT1G11100.1 | 26.642 | 274 | 159 | 9 | 223 | 474 | 629 | 882 | 1.86e-12 | 72.0 |
Msa1452220 | AT1G11100.4 | 28.205 | 156 | 109 | 2 | 540 | 695 | 1116 | 1268 | 9.31e-13 | 73.2 |
Msa1452220 | AT2G40770.2 | 30.387 | 181 | 112 | 5 | 541 | 710 | 1451 | 1628 | 9.50e-13 | 73.2 |
Msa1452220 | AT2G40770.1 | 30.387 | 181 | 112 | 5 | 541 | 710 | 1451 | 1628 | 9.50e-13 | 73.2 |
Msa1452220 | AT2G40770.3 | 30.387 | 181 | 112 | 5 | 541 | 710 | 1451 | 1628 | 9.50e-13 | 73.2 |
Msa1452220 | AT1G11100.2 | 28.205 | 156 | 109 | 2 | 540 | 695 | 1115 | 1267 | 9.55e-13 | 73.2 |
Find 219 sgRNAs with CRISPR-Local
Find 779 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTATTCACACTCATCTATTT+TGG | 0.148567 | tig0033735:+19624 | Msa1452220:three_prime_UTR |
CAATATCAATGGATGCATTT+TGG | 0.198230 | tig0033735:+10480 | Msa1452220:CDS |
TTTCTGTAGCTTGGGACTTA+TGG | 0.211088 | tig0033735:-19236 | None:intergenic |
GGTTCTCTTCCGCAAATTAT+TGG | 0.231882 | tig0033735:-11655 | None:intergenic |
GTCAGAGATTCATGAAAATA+TGG | 0.234542 | tig0033735:+18538 | Msa1452220:CDS |
GGAGGCTGGGTTGAGCTTTC+CGG | 0.242395 | tig0033735:+13713 | Msa1452220:CDS |
CTTGCAGCCCATCATTGTTT+TGG | 0.246541 | tig0033735:-18574 | None:intergenic |
TTGTGAAACTTGTTCAATTT+CGG | 0.249942 | tig0033735:-9775 | None:intergenic |
ACTGAAGCAATCGAAGATTT+TGG | 0.250959 | tig0033735:+13134 | Msa1452220:CDS |
TTCCCTCCAAATATGTTATC+TGG | 0.256084 | tig0033735:+13580 | Msa1452220:CDS |
TTTACTAATCCTGGAATATT+GGG | 0.261164 | tig0033735:+11318 | Msa1452220:CDS |
TACCGTCCAGATAACATATT+TGG | 0.264438 | tig0033735:-13586 | None:intergenic |
CTACTTAAATCTTCTTCTAA+TGG | 0.272036 | tig0033735:-18921 | None:intergenic |
AAGTCCCAAGCTACAGAAAA+AGG | 0.281198 | tig0033735:+19240 | Msa1452220:CDS |
CGATAAGGTTACCTTTGATT+AGG | 0.288517 | tig0033735:-9821 | None:intergenic |
CAAAATGCATCCATTGATAT+TGG | 0.302911 | tig0033735:-10479 | None:intergenic |
GCTGTCAGGAACTCCTTTGC+AGG | 0.303531 | tig0033735:+11165 | Msa1452220:CDS |
TTTGGACATTAACGTAATAT+TGG | 0.307741 | tig0033735:+19642 | Msa1452220:three_prime_UTR |
TTTACTTGTTTATCATTTGC+TGG | 0.308586 | tig0033735:-16535 | None:intergenic |
GGTTGTGGACTCAATTTGAT+TGG | 0.311504 | tig0033735:+16475 | Msa1452220:CDS |
GCATGACACATTGGCAATAT+TGG | 0.316681 | tig0033735:-19347 | None:intergenic |
TTCCTCAAACGCAGGTTAAA+CGG | 0.326315 | tig0033735:+13097 | Msa1452220:intron |
GATAAGGTTACCTTTGATTA+GGG | 0.328831 | tig0033735:-9820 | None:intergenic |
GCGCTACATCAATCAGTAAA+AGG | 0.330521 | tig0033735:+16271 | Msa1452220:CDS |
GCGGAGGTGGGAATAGAAAT+AGG | 0.333995 | tig0033735:-10011 | None:intergenic |
GTCTTCACAAACCAAGTTGA+TGG | 0.337292 | tig0033735:+19193 | Msa1452220:CDS |
GTTGTGGACTCAATTTGATT+GGG | 0.337346 | tig0033735:+16476 | Msa1452220:CDS |
TTCATTTACAAGAGAGTGTT+TGG | 0.337869 | tig0033735:-19452 | None:intergenic |
AGAAGAAGATTTAAGTAGTT+GGG | 0.343059 | tig0033735:+18926 | Msa1452220:CDS |
CTGCTTGAACGACCCGTCTA+AGG | 0.353082 | tig0033735:+16308 | Msa1452220:CDS |
GGACAGGAGGGGATGGAGGC+TGG | 0.354683 | tig0033735:+13699 | Msa1452220:CDS |
GCTGAGATTGCAGGCTGCTT+AGG | 0.355655 | tig0033735:+18668 | Msa1452220:CDS |
AACAGGCCGCAGCAAGAGTT+TGG | 0.360517 | tig0033735:+16653 | Msa1452220:intron |
TCCTCAAAACCTGAAGTTCC+TGG | 0.363361 | tig0033735:-13544 | None:intergenic |
AGTGGGAGCCCAGGAACTTC+AGG | 0.363722 | tig0033735:+13535 | Msa1452220:CDS |
CTACCAGTCTCGTTAGCAAT+TGG | 0.369976 | tig0033735:+10712 | Msa1452220:CDS |
TCATTTGCTGGATTCCAATC+AGG | 0.370586 | tig0033735:-16523 | None:intergenic |
TTCTCTTCTGCAGTAGCAGC+AGG | 0.380163 | tig0033735:-11676 | None:intergenic |
AGTGAGGGTACTTTCGTTCC+CGG | 0.381753 | tig0033735:-16236 | None:intergenic |
AGCAGCAAGGCTGGTGGTTG+TGG | 0.382521 | tig0033735:+16460 | Msa1452220:CDS |
GGTGGATTTGCTGAGATTGC+AGG | 0.385206 | tig0033735:+18659 | Msa1452220:CDS |
ATTAAGTGCCAAAGTTAATC+AGG | 0.387595 | tig0033735:+11726 | Msa1452220:CDS |
CGCCACACCTTTGACTGAGT+TGG | 0.387992 | tig0033735:+10031 | Msa1452220:CDS |
CATGCTCATCTTCGATTGCT+TGG | 0.388152 | tig0033735:+19365 | Msa1452220:CDS |
CTGAGATTGCAGGCTGCTTA+GGG | 0.395876 | tig0033735:+18669 | Msa1452220:CDS |
AAATATTACCTGATTAACTT+TGG | 0.396814 | tig0033735:-11734 | None:intergenic |
TCCTCAAACGCAGGTTAAAC+GGG | 0.396884 | tig0033735:+13098 | Msa1452220:intron |
TACCCTCACTTGAGGCTTGA+TGG | 0.397234 | tig0033735:+16249 | Msa1452220:CDS |
AGCTTATTGCGTAAAGCAAA+AGG | 0.398267 | tig0033735:-19304 | None:intergenic |
GCATCAGATGGTGGTTTAAA+CGG | 0.405259 | tig0033735:-9909 | None:intergenic |
TACAAGAGAGTGGCCATCAT+TGG | 0.407276 | tig0033735:-19509 | None:intergenic |
TCGTCTTGTTTGATCCTGAT+TGG | 0.408082 | tig0033735:+16509 | Msa1452220:CDS |
AGAGGTTGCCAGAGTATTAG+AGG | 0.417246 | tig0033735:-10122 | None:intergenic |
AGTCAAAGGTGTGGCGGAGG+TGG | 0.419591 | tig0033735:-10024 | None:intergenic |
TAGAAGAAGATTTAAGTAGT+TGG | 0.420677 | tig0033735:+18925 | Msa1452220:CDS |
ACGATTGTCTCTTGACGATA+AGG | 0.426282 | tig0033735:-9836 | None:intergenic |
CAATGCGATCATTTGTTCTC+TGG | 0.427762 | tig0033735:-13775 | None:intergenic |
TTTAACCTGGAATTTGCCTT+GGG | 0.429767 | tig0033735:-10838 | None:intergenic |
CACAGCCTCCTCTTTGTGAT+CGG | 0.429771 | tig0033735:-10066 | None:intergenic |
GCAATGCCGCCCAATATTCC+AGG | 0.433353 | tig0033735:-11327 | None:intergenic |
AAGTCCCCAAGGCAAATTCC+AGG | 0.435069 | tig0033735:+10833 | Msa1452220:CDS |
TACCAGTCTCGTTAGCAATT+GGG | 0.448605 | tig0033735:+10713 | Msa1452220:CDS |
TCGCAAAAGGTTTGTCCCAT+GGG | 0.448696 | tig0033735:+9977 | Msa1452220:CDS |
GATGATGAAACCGCTGATAT+AGG | 0.450682 | tig0033735:+18638 | Msa1452220:CDS |
TTCATGTTTGATTGTGTCGC+TGG | 0.455017 | tig0033735:+10442 | Msa1452220:CDS |
TTCTTTGTAGGTCTGGATCA+TGG | 0.456442 | tig0033735:+13678 | Msa1452220:intron |
ATTTAACCTGGAATTTGCCT+TGG | 0.460433 | tig0033735:-10839 | None:intergenic |
AGTATTAGAGGATCAATTCC+AGG | 0.462390 | tig0033735:-10110 | None:intergenic |
GTAGGCTTTCTGCTCGCAAA+AGG | 0.467278 | tig0033735:+9964 | Msa1452220:CDS |
AAAATGCATCCATTGATATT+GGG | 0.469154 | tig0033735:-10478 | None:intergenic |
TTCCGGTAAAATGCAAGTCT+TGG | 0.471756 | tig0033735:+13730 | Msa1452220:CDS |
GGTGACCCATTTACCTTAGA+CGG | 0.474246 | tig0033735:-16321 | None:intergenic |
TTTCGCTCGACGTTGCGGCT+TGG | 0.474343 | tig0033735:-19274 | None:intergenic |
CACCGTCTGGTACAGAGGTT+GGG | 0.474429 | tig0033735:-18962 | None:intergenic |
TTTCTCTTAAGCAGCAAGGC+TGG | 0.477168 | tig0033735:+16451 | Msa1452220:CDS |
TTTGAAAACATCAGAAAAGC+AGG | 0.477246 | tig0033735:+18694 | Msa1452220:CDS |
TACCCTGCTGATTCCAATGA+TGG | 0.479260 | tig0033735:+19496 | Msa1452220:CDS |
TGCCGGAACAATAGAAGAAA+AGG | 0.480151 | tig0033735:+16720 | Msa1452220:CDS |
GCAAATAGCGGCAGCTCCAT+TGG | 0.481461 | tig0033735:-9880 | None:intergenic |
GACAGGAGGGGATGGAGGCT+GGG | 0.481693 | tig0033735:+13700 | Msa1452220:CDS |
CTCGCAAAAGGTTTGTCCCA+TGG | 0.482042 | tig0033735:+9976 | Msa1452220:CDS |
TAAACTTCTCTGAATGCATT+CGG | 0.482667 | tig0033735:-10955 | None:intergenic |
TTCGATTGCTTGGACGAAGA+AGG | 0.482907 | tig0033735:+19375 | Msa1452220:CDS |
CTTATTTGTCAAGGTTTCGA+TGG | 0.486969 | tig0033735:+10654 | Msa1452220:CDS |
TGGCCATCATTGGAATCAGC+AGG | 0.487021 | tig0033735:-19499 | None:intergenic |
GGATCATGGACAGGAGGGGA+TGG | 0.488306 | tig0033735:+13692 | Msa1452220:CDS |
GCTTATTGCGTAAAGCAAAA+GGG | 0.490035 | tig0033735:-19303 | None:intergenic |
GAATTGATCCTCTAATACTC+TGG | 0.490279 | tig0033735:+10114 | Msa1452220:CDS |
GGGAAGCAGAAATTAAGAAG+TGG | 0.493257 | tig0033735:+10733 | Msa1452220:CDS |
GAAGAAGATTTAAGTAGTTG+GGG | 0.493552 | tig0033735:+18927 | Msa1452220:CDS |
TCCTGGGCTCCCACTTCGTA+TGG | 0.496031 | tig0033735:-13527 | None:intergenic |
GAAGCCTGAAGGACACCGTC+TGG | 0.497770 | tig0033735:-18975 | None:intergenic |
TGAATACATCAAACCAAACC+TGG | 0.499854 | tig0033735:-19608 | None:intergenic |
AATCAGTAAAAGGCAAAAGT+TGG | 0.499941 | tig0033735:+16281 | Msa1452220:CDS |
TTCCCAATTGCTAACGAGAC+TGG | 0.501716 | tig0033735:-10715 | None:intergenic |
GGGAAGAGAGAGAATGTTGG+AGG | 0.502288 | tig0033735:+9668 | None:intergenic |
AAATTAGAATTAGAAGGAAG+AGG | 0.504212 | tig0033735:-10140 | None:intergenic |
ACATATTTGGAGGGAAGAAT+CGG | 0.506607 | tig0033735:-13573 | None:intergenic |
AGTCGTTGCCAAAACAATGA+TGG | 0.512751 | tig0033735:+18566 | Msa1452220:CDS |
CTCAGTCAAAGGTGTGGCGG+AGG | 0.513645 | tig0033735:-10027 | None:intergenic |
ACACCGTCTGGTACAGAGGT+TGG | 0.514170 | tig0033735:-18963 | None:intergenic |
CAGCGTCAGATGGCAAAAGA+AGG | 0.516297 | tig0033735:+16864 | Msa1452220:CDS |
CTTGGAAGAATTCTTTGCAA+TGG | 0.517028 | tig0033735:+11290 | Msa1452220:CDS |
GTTGTGAAATTAGAATTAGA+AGG | 0.517242 | tig0033735:-10146 | None:intergenic |
GCAGAAATTAAGAAGTGGGT+TGG | 0.517723 | tig0033735:+10738 | Msa1452220:CDS |
AAACGACAGCGTCGCGGCAC+AGG | 0.519079 | tig0033735:+16914 | Msa1452220:CDS |
GGTGTCCTTCAGGCTTCAGC+TGG | 0.519955 | tig0033735:+18981 | Msa1452220:CDS |
GTCAAAGGTGTGGCGGAGGT+GGG | 0.523585 | tig0033735:-10023 | None:intergenic |
TCAGAGATTCATGAAAATAT+GGG | 0.524219 | tig0033735:+18539 | Msa1452220:CDS |
GGAAGCAGAAATTAAGAAGT+GGG | 0.524311 | tig0033735:+10734 | Msa1452220:CDS |
TGTGAGACACCCAATATCAA+TGG | 0.524350 | tig0033735:+10469 | Msa1452220:CDS |
AGGTTTCGATGGGAAGCCTA+TGG | 0.524430 | tig0033735:+10665 | Msa1452220:CDS |
CTATATACTCTTATTTGTCA+AGG | 0.527026 | tig0033735:+10645 | Msa1452220:CDS |
TCAGAGAAGTTTAGCTCTAG+TGG | 0.527590 | tig0033735:+10965 | Msa1452220:CDS |
TTGGGACTTATGGAGTCAAC+CGG | 0.528661 | tig0033735:-19226 | None:intergenic |
GCAGCAAGAGTTTGGAGGGA+TGG | 0.529039 | tig0033735:+16661 | Msa1452220:CDS |
TGACACTTCAACTTCTTCAT+CGG | 0.530466 | tig0033735:-9736 | None:intergenic |
GGCAAAAGAAGGGCTGCAAA+AGG | 0.530881 | tig0033735:+16875 | Msa1452220:CDS |
ACAAGACAAGATGTTATCTC+CGG | 0.533450 | tig0033735:+10795 | Msa1452220:CDS |
ACCATACGAAGTGGGAGCCC+AGG | 0.536781 | tig0033735:+13526 | Msa1452220:CDS |
CTCTTAAGCAGCAAGGCTGG+TGG | 0.536926 | tig0033735:+16454 | Msa1452220:CDS |
GGTGTTTAATGCTACACTCA+TGG | 0.538171 | tig0033735:-19431 | None:intergenic |
TGGGAAGCCTATGGTTAGAA+AGG | 0.541851 | tig0033735:+10674 | Msa1452220:CDS |
TGTAGGTCTGGATCATGGAC+AGG | 0.545351 | tig0033735:+13683 | Msa1452220:intron |
ATAAAGGCTCCAATAATTTG+CGG | 0.545607 | tig0033735:+11646 | Msa1452220:intron |
GTACCAGCTTTCCATCAACT+TGG | 0.548719 | tig0033735:-19204 | None:intergenic |
AAGAGTATATAGTAATGTGA+TGG | 0.554919 | tig0033735:-10634 | None:intergenic |
TTATTTGTCAAGGTTTCGAT+GGG | 0.555614 | tig0033735:+10655 | Msa1452220:CDS |
GTGCCACTTGCAGAATGACT+TGG | 0.555828 | tig0033735:+11272 | Msa1452220:intron |
AAACCAAGTTGATGGAAAGC+TGG | 0.556394 | tig0033735:+19201 | Msa1452220:CDS |
GTGACCCATTTACCTTAGAC+GGG | 0.556601 | tig0033735:-16320 | None:intergenic |
GGATAGATCCTCACCTGCAA+AGG | 0.556723 | tig0033735:-11178 | None:intergenic |
CGTCCAGATAACATATTTGG+AGG | 0.557645 | tig0033735:-13583 | None:intergenic |
CCTCAAAACCTGAAGTTCCT+GGG | 0.561955 | tig0033735:-13543 | None:intergenic |
TCATGGACAGGAGGGGATGG+AGG | 0.565542 | tig0033735:+13695 | Msa1452220:CDS |
CGCCATCAAGCCTCAAGTGA+GGG | 0.567392 | tig0033735:-16251 | None:intergenic |
TCAGGCTTCAGCTGGTGATG+AGG | 0.569815 | tig0033735:+18989 | Msa1452220:CDS |
TTCAAATCCAACTCAGTCAA+AGG | 0.570280 | tig0033735:-10038 | None:intergenic |
GGTCTGGATCATGGACAGGA+GGG | 0.572508 | tig0033735:+13687 | Msa1452220:intron |
GGAGATAACATCTTGTCTTG+TGG | 0.573387 | tig0033735:-10793 | None:intergenic |
CGAAGGAAACGAACAAGCAA+AGG | 0.574392 | tig0033735:-10182 | None:intergenic |
AGTTGATGGAAAGCTGGTAC+CGG | 0.574626 | tig0033735:+19207 | Msa1452220:CDS |
AGCAAAACTCTACGTTTACA+CGG | 0.575953 | tig0033735:-11145 | None:intergenic |
CGAAGATGAGCATGACACAT+TGG | 0.576913 | tig0033735:-19356 | None:intergenic |
AGGCCGCAGCAAGAGTTTGG+AGG | 0.577911 | tig0033735:+16656 | Msa1452220:intron |
CCGAGAGTATATTCCACCAA+TGG | 0.578254 | tig0033735:+9864 | Msa1452220:CDS |
ATATTTCATTTACAAGAGAG+TGG | 0.580539 | tig0033735:-19519 | None:intergenic |
AGCGTCAGATGGCAAAAGAA+GGG | 0.581477 | tig0033735:+16865 | Msa1452220:CDS |
ACTGGTAGGAGTGACGATGA+TGG | 0.581982 | tig0033735:-10697 | None:intergenic |
AAGGACACCGTCTGGTACAG+AGG | 0.582567 | tig0033735:-18967 | None:intergenic |
GTCTGGATCATGGACAGGAG+GGG | 0.585787 | tig0033735:+13688 | Msa1452220:CDS |
GGCCGCAGCAAGAGTTTGGA+GGG | 0.586014 | tig0033735:+16657 | Msa1452220:intron |
ATGATGGCCTTTCTAACCAT+AGG | 0.587048 | tig0033735:-10681 | None:intergenic |
AATGTAGAAGCCCTAATCAA+AGG | 0.590235 | tig0033735:+9810 | Msa1452220:CDS |
TTCCCAACCTCTGTACCAGA+CGG | 0.590421 | tig0033735:+18960 | Msa1452220:CDS |
GTCGTTGCCAAAACAATGAT+GGG | 0.591538 | tig0033735:+18567 | Msa1452220:CDS |
TCAATGATTAATAGCGAATG+TGG | 0.593152 | tig0033735:+18614 | Msa1452220:CDS |
TTTGGCAGATGATATGGGGT+GGG | 0.593486 | tig0033735:+10498 | Msa1452220:CDS |
CTCCAAATATGTTATCTGGA+CGG | 0.594835 | tig0033735:+13584 | Msa1452220:CDS |
CGCAAAAGGTTTGTCCCATG+GGG | 0.595104 | tig0033735:+9978 | Msa1452220:CDS |
AATAGCGGCAGCTCCATTGG+TGG | 0.598029 | tig0033735:-9877 | None:intergenic |
ACTTGTAAAACTGTTAATCC+CGG | 0.599926 | tig0033735:-10814 | None:intergenic |
GTAAAATACACTACCTTCGG+TGG | 0.602347 | tig0033735:-11994 | None:intergenic |
TTGTGGACTCAATTTGATTG+GGG | 0.604497 | tig0033735:+16477 | Msa1452220:CDS |
GTAGGTCTACCAGCGTCAGA+TGG | 0.604843 | tig0033735:+16854 | Msa1452220:intron |
CCATTGGTGGAATATACTCT+CGG | 0.605305 | tig0033735:-9864 | None:intergenic |
CTTATTGCGTAAAGCAAAAG+GGG | 0.605558 | tig0033735:-19302 | None:intergenic |
ACGAACAAGCAAAGGATCAA+CGG | 0.607307 | tig0033735:-10174 | None:intergenic |
CAAGACAAGATGTTATCTCC+GGG | 0.609431 | tig0033735:+10796 | Msa1452220:CDS |
CATCACCAGCTGAAGCCTGA+AGG | 0.612055 | tig0033735:-18986 | None:intergenic |
CAATTTGTTTACTTTCGATG+AGG | 0.612759 | tig0033735:+17051 | Msa1452220:CDS |
ATCCCTCCAAACTCTTGCTG+CGG | 0.615336 | tig0033735:-16659 | None:intergenic |
GTATTAGAGGATCAATTCCA+GGG | 0.615797 | tig0033735:-10109 | None:intergenic |
CCTTGTCTCAAACTATACTC+AGG | 0.616189 | tig0033735:+13799 | Msa1452220:CDS |
GTCCAGATAACATATTTGGA+GGG | 0.617579 | tig0033735:-13582 | None:intergenic |
ATCAAATCACTTACCACCGA+AGG | 0.617600 | tig0033735:+11981 | Msa1452220:CDS |
AAAGTTATGCAATCATCCAA+AGG | 0.620113 | tig0033735:+13176 | Msa1452220:CDS |
TGTGAGCCTCGTCACAGATG+AGG | 0.620502 | tig0033735:-11000 | None:intergenic |
TGGTTTCACAAAGAGCAACA+AGG | 0.624538 | tig0033735:-10773 | None:intergenic |
CAATTGCTAACGAGACTGGT+AGG | 0.629478 | tig0033735:-10711 | None:intergenic |
GGCTGCAAAAGGTCATTCAG+AGG | 0.630643 | tig0033735:+16886 | Msa1452220:CDS |
GCGCCATCAAGCCTCAAGTG+AGG | 0.631216 | tig0033735:-16252 | None:intergenic |
ACTTATTTGATGCAGAGAAG+GGG | 0.631972 | tig0033735:+10414 | Msa1452220:intron |
TTATCGTTGTAAGCATCAGA+TGG | 0.634634 | tig0033735:-9921 | None:intergenic |
GTAAAATGCAAGTCTTGGCA+AGG | 0.636758 | tig0033735:+13735 | Msa1452220:CDS |
TCGTTGTAAGCATCAGATGG+TGG | 0.638376 | tig0033735:-9918 | None:intergenic |
GTCACAGATGAGGAGATCAC+AGG | 0.639297 | tig0033735:-10990 | None:intergenic |
GCTGCAAAAGGTCATTCAGA+GGG | 0.643202 | tig0033735:+16887 | Msa1452220:CDS |
GATGAAACCGCTGATATAGG+TGG | 0.643567 | tig0033735:+18641 | Msa1452220:CDS |
CCTGAGTATAGTTTGAGACA+AGG | 0.644810 | tig0033735:-13799 | None:intergenic |
CAACTCAGTCAAAGGTGTGG+CGG | 0.645092 | tig0033735:-10030 | None:intergenic |
TGATCTCCTCATCTGTGACG+AGG | 0.646770 | tig0033735:+10994 | Msa1452220:CDS |
TAGGAGTGGTAGAACCCCAT+GGG | 0.648650 | tig0033735:-9992 | None:intergenic |
ATCCAACTCAGTCAAAGGTG+TGG | 0.648993 | tig0033735:-10033 | None:intergenic |
GGGTAACTTTCTCTCGACAG+AGG | 0.649359 | tig0033735:+17021 | Msa1452220:intron |
ACTAATCCTGGAATATTGGG+CGG | 0.654973 | tig0033735:+11321 | Msa1452220:CDS |
AGCAAATCCACCTATATCAG+CGG | 0.654979 | tig0033735:-18648 | None:intergenic |
AGGTCTGGATCATGGACAGG+AGG | 0.655391 | tig0033735:+13686 | Msa1452220:intron |
ATAGGAGTGGTAGAACCCCA+TGG | 0.657942 | tig0033735:-9993 | None:intergenic |
ATTGCGTAAAGCAAAAGGGG+TGG | 0.658694 | tig0033735:-19299 | None:intergenic |
TTATATAGATCTGATTGTAG+CGG | 0.658921 | tig0033735:-12968 | None:intergenic |
GTAAACAAGATCTTGCTCGT+AGG | 0.660412 | tig0033735:+9946 | Msa1452220:CDS |
GAATATCTCCGATCACAAAG+AGG | 0.662196 | tig0033735:+10058 | Msa1452220:CDS |
TATATGATACCATACGAAGT+GGG | 0.664757 | tig0033735:+13518 | Msa1452220:CDS |
GGCCATCATTGGAATCAGCA+GGG | 0.665069 | tig0033735:-19498 | None:intergenic |
ATATATGATACCATACGAAG+TGG | 0.665493 | tig0033735:+13517 | Msa1452220:CDS |
TTAACCTGGAATTTGCCTTG+GGG | 0.667752 | tig0033735:-10837 | None:intergenic |
GAATACATCAAACCAAACCT+GGG | 0.668264 | tig0033735:-19607 | None:intergenic |
GCAAAACTCTACGTTTACAC+GGG | 0.670969 | tig0033735:-11144 | None:intergenic |
GGTGGGAATAGAAATAGGAG+TGG | 0.674629 | tig0033735:-10006 | None:intergenic |
TGATCAGACAATAACAAACA+AGG | 0.675219 | tig0033735:+11033 | Msa1452220:CDS |
AACGAAAGTACCCTCACTTG+AGG | 0.678598 | tig0033735:+16241 | Msa1452220:CDS |
GGAGCAAAACGACAGCGTCG+CGG | 0.680180 | tig0033735:+16908 | Msa1452220:CDS |
ACTGCAGAAGAGAAGAAACT+CGG | 0.683049 | tig0033735:+11685 | Msa1452220:CDS |
TATCTCCGATCACAAAGAGG+AGG | 0.684028 | tig0033735:+10061 | Msa1452220:CDS |
AAATTGAACAAGTTTCACAA+CGG | 0.700066 | tig0033735:+9778 | Msa1452220:CDS |
TATTAGAGGATCAATTCCAG+GGG | 0.720043 | tig0033735:-10108 | None:intergenic |
ATATTGGATGCAGAACGTAG+TGG | 0.726763 | tig0033735:-19331 | None:intergenic |
ATTAGAGGATCAATTCCAGG+GGG | 0.774158 | tig0033735:-10107 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATTAAA+GGG | - | tig0033735:12762-12781 | None:intergenic | 0.0% |
!! | TATATATATATATATATTAA+AGG | - | tig0033735:12763-12782 | None:intergenic | 0.0% |
!! | TAAAAGGAATATTTAATTAA+AGG | + | tig0033735:15987-16006 | Msa1452220:intron | 10.0% |
!! | AATGTCTAGTATTTAATATA+GGG | + | tig0033735:12553-12572 | Msa1452220:intron | 15.0% |
!! | ATATATATATATATATCACC+TGG | + | tig0033735:12808-12827 | Msa1452220:intron | 15.0% |
!!! | ATTTAGACTATTTTGTTTTT+TGG | + | tig0033735:13203-13222 | Msa1452220:intron | 15.0% |
!!! | CAATTATTTTTCTTTAACAA+AGG | - | tig0033735:13416-13435 | None:intergenic | 15.0% |
!! | TTAAAGAAAAATAATTGTGA+AGG | + | tig0033735:13419-13438 | Msa1452220:intron | 15.0% |
!! | AAAACTAAAGTAAAAAGATA+AGG | - | tig0033735:14839-14858 | None:intergenic | 15.0% |
!!! | TTATCTTTTTACTTTAGTTT+TGG | + | tig0033735:14838-14857 | Msa1452220:intron | 15.0% |
!! | AATAGTATATATAGATCAAA+AGG | - | tig0033735:17099-17118 | None:intergenic | 15.0% |
!!! | TTTTGATCTATATATACTAT+TGG | + | tig0033735:17098-17117 | Msa1452220:intron | 15.0% |
!!! | AATTATGTAGATTTAGATTT+TGG | - | tig0033735:17215-17234 | None:intergenic | 15.0% |
!!! | ATAATTTTCTCAAGATTTTT+AGG | + | tig0033735:17229-17248 | Msa1452220:intron | 15.0% |
!! | CATTTATTAACTAATTGAAT+TGG | - | tig0033735:18337-18356 | None:intergenic | 15.0% |
!! | TAAATAATTAAAAAAGGGAA+GGG | - | tig0033735:19053-19072 | None:intergenic | 15.0% |
!! | ATAAATAATTAAAAAAGGGA+AGG | - | tig0033735:19054-19073 | None:intergenic | 15.0% |
!!! | GGATTTTTTTTTTTTTTTTG+TGG | - | tig0033735:19120-19139 | None:intergenic | 15.0% |
!! | TCAGAATATACTAGAAATTA+AGG | + | tig0033735:11447-11466 | Msa1452220:intron | 20.0% |
!! | GTAATAACAGTAAAAATATG+CGG | - | tig0033735:11517-11536 | None:intergenic | 20.0% |
!! | AAATATTACCTGATTAACTT+TGG | - | tig0033735:11737-11756 | None:intergenic | 20.0% |
!!! | AATCAGGTAATATTTTTTCT+TGG | + | tig0033735:11742-11761 | Msa1452220:intron | 20.0% |
!!! | TCTCTAATGAGATTTTATAT+TGG | - | tig0033735:12406-12425 | None:intergenic | 20.0% |
!!! | AGTAAAATAGTTTTTACACA+TGG | + | tig0033735:12473-12492 | Msa1452220:intron | 20.0% |
!! | CTATATTAAATACTAGACAT+TGG | - | tig0033735:12554-12573 | None:intergenic | 20.0% |
!! | CAATGTCTAGTATTTAATAT+AGG | + | tig0033735:12552-12571 | Msa1452220:intron | 20.0% |
!!! | AAAACTAGACATTACATTTT+TGG | - | tig0033735:13008-13027 | None:intergenic | 20.0% |
!!! | AACTATTTCTAACATATAAG+GGG | - | tig0033735:13302-13321 | None:intergenic | 20.0% |
!!! | GAACTATTTCTAACATATAA+GGG | - | tig0033735:13303-13322 | None:intergenic | 20.0% |
!! | AGGAAATGAATGAAAATAAA+TGG | - | tig0033735:13377-13396 | None:intergenic | 20.0% |
!! | GACAAATATATGTGATATAA+GGG | - | tig0033735:13874-13893 | None:intergenic | 20.0% |
!! | TGACAAATATATGTGATATA+AGG | - | tig0033735:13875-13894 | None:intergenic | 20.0% |
!!! | AATATACAATAAACTTGCTA+AGG | - | tig0033735:13933-13952 | None:intergenic | 20.0% |
!! | GTCAAGTTAGATTAAAAAAA+AGG | - | tig0033735:13986-14005 | None:intergenic | 20.0% |
!! | GTATATGTTAAGAAGAAATA+AGG | - | tig0033735:14430-14449 | None:intergenic | 20.0% |
!! | TATTTCTTCTTAACATATAC+TGG | + | tig0033735:14430-14449 | Msa1452220:intron | 20.0% |
!!! | TTTTTTCTTTTTCCAATCAT+TGG | + | tig0033735:14559-14578 | Msa1452220:intron | 20.0% |
!!! | TTTTTCTTTTTCCAATCATT+GGG | + | tig0033735:14560-14579 | Msa1452220:intron | 20.0% |
!! | TGGGTATCATAAAATTAAAA+AGG | - | tig0033735:14605-14624 | None:intergenic | 20.0% |
!! | AAAGTAAATAAACTCAATGA+GGG | + | tig0033735:15867-15886 | Msa1452220:intron | 20.0% |
!! | ATTAGAATTTGGAAATTTCA+AGG | - | tig0033735:16345-16364 | None:intergenic | 20.0% |
!!! | AGTCAAAATGTTTTTATCAA+AGG | - | tig0033735:16410-16429 | None:intergenic | 20.0% |
!! | GAATCTATTAAGTTATTTGT+AGG | + | tig0033735:16836-16855 | Msa1452220:intron | 20.0% |
!!! | ATAATTTGTTTATGGTTTTC+AGG | + | tig0033735:17000-17019 | Msa1452220:intron | 20.0% |
!!! | TAATTTGTTTATGGTTTTCA+GGG | + | tig0033735:17001-17020 | Msa1452220:intron | 20.0% |
!!! | GTTATGATATCTGAAATTTT+CGG | + | tig0033735:17122-17141 | Msa1452220:intron | 20.0% |
!!! | AATTCTGTTAGAATGATTTT+TGG | + | tig0033735:17431-17450 | Msa1452220:intron | 20.0% |
!!! | ACTCATAAATATTTTCTACA+TGG | - | tig0033735:18054-18073 | None:intergenic | 20.0% |
!! | TATAATCATTTACAACAATG+AGG | + | tig0033735:18204-18223 | Msa1452220:intron | 20.0% |
!! | AAGATAATCATAAAAGAAGT+TGG | + | tig0033735:18386-18405 | Msa1452220:intron | 20.0% |
!! | ACAAAAAGAACAAATTATTG+TGG | + | tig0033735:18859-18878 | Msa1452220:intron | 20.0% |
!! | AAATAATTAAAAAAGGGAAG+GGG | - | tig0033735:19052-19071 | None:intergenic | 20.0% |
!! | AAATTCAATTATGCATCAAA+TGG | - | tig0033735:19141-19160 | None:intergenic | 20.0% |
!!! | ACTGCTTTTCTATATTTTTT+AGG | + | tig0033735:19162-19181 | Msa1452220:intron | 20.0% |
!! | TTGTGAAACTTGTTCAATTT+CGG | - | tig0033735:9778-9797 | None:intergenic | 25.0% |
! | AAATTGAACAAGTTTCACAA+CGG | + | tig0033735:9778-9797 | Msa1452220:CDS | 25.0% |
! | AAATTAGAATTAGAAGGAAG+AGG | - | tig0033735:10143-10162 | None:intergenic | 25.0% |
! | GTTGTGAAATTAGAATTAGA+AGG | - | tig0033735:10149-10168 | None:intergenic | 25.0% |
! | ATAAAAGGAATTGATTGAGA+AGG | - | tig0033735:10228-10247 | None:intergenic | 25.0% |
!! | TCTCAATCAATTCCTTTTAT+TGG | + | tig0033735:10228-10247 | Msa1452220:intron | 25.0% |
! | AAGATATTGTTTATGCAGTT+TGG | - | tig0033735:10363-10382 | None:intergenic | 25.0% |
! | AAAATGCATCCATTGATATT+GGG | - | tig0033735:10481-10500 | None:intergenic | 25.0% |
!! | AAGAGTATATAGTAATGTGA+TGG | - | tig0033735:10637-10656 | None:intergenic | 25.0% |
!! | CTATATACTCTTATTTGTCA+AGG | + | tig0033735:10645-10664 | Msa1452220:CDS | 25.0% |
!! | ATGGTTAATTTTACTAATCC+TGG | + | tig0033735:11309-11328 | Msa1452220:CDS | 25.0% |
!! | TTTTACTAATCCTGGAATAT+TGG | + | tig0033735:11317-11336 | Msa1452220:CDS | 25.0% |
! | TTTACTAATCCTGGAATATT+GGG | + | tig0033735:11318-11337 | Msa1452220:CDS | 25.0% |
!! | AATTAAGAGCTTAAAGCTTT+TGG | - | tig0033735:11418-11437 | None:intergenic | 25.0% |
!! | TTTTGCAGTTCATATTAAGA+AGG | + | tig0033735:11944-11963 | Msa1452220:intron | 25.0% |
! | AAAGTAAAATACACTACCTT+CGG | - | tig0033735:12000-12019 | None:intergenic | 25.0% |
!!! | AAAGAGACTTCTGTTTTTTA+AGG | - | tig0033735:12136-12155 | None:intergenic | 25.0% |
! | TCTTTCGATTATCTAATGTA+TGG | - | tig0033735:12166-12185 | None:intergenic | 25.0% |
!! | TTTTACTTAATCTAGCTACT+GGG | - | tig0033735:12460-12479 | None:intergenic | 25.0% |
!! | ATTTTACTTAATCTAGCTAC+TGG | - | tig0033735:12461-12480 | None:intergenic | 25.0% |
! | ATAAAAGACACCTTCATAAA+AGG | - | tig0033735:12594-12613 | None:intergenic | 25.0% |
! | TTATATAGATCTGATTGTAG+CGG | - | tig0033735:12971-12990 | None:intergenic | 25.0% |
! | AATAGTCTAAATCATACCTT+TGG | - | tig0033735:13195-13214 | None:intergenic | 25.0% |
!!! | CTATTTTGTTTTTTGGATGA+TGG | + | tig0033735:13210-13229 | Msa1452220:intron | 25.0% |
!!! | CGAACTATTTCTAACATATA+AGG | - | tig0033735:13304-13323 | None:intergenic | 25.0% |
! | TTCAGTTAGACTTATACATT+TGG | + | tig0033735:13625-13644 | Msa1452220:intron | 25.0% |
! | CAAGTTTATTGTATATTGCT+AGG | + | tig0033735:13936-13955 | Msa1452220:intron | 25.0% |
! | ATCTATTATTCTATTCTACC+TGG | + | tig0033735:14019-14038 | Msa1452220:intron | 25.0% |
! | TCTATTATTCTATTCTACCT+GGG | + | tig0033735:14020-14039 | Msa1452220:intron | 25.0% |
! | GAAAATTAGGAAAAAGCAAT+TGG | - | tig0033735:14280-14299 | None:intergenic | 25.0% |
! | AACTAACAATTGAAAAGAAG+CGG | + | tig0033735:14382-14401 | Msa1452220:intron | 25.0% |
! | ATGTTAAGAAGAAATAAGGA+TGG | - | tig0033735:14426-14445 | None:intergenic | 25.0% |
! | AATTTGTAAATCCCAATGAT+TGG | - | tig0033735:14574-14593 | None:intergenic | 25.0% |
! | TATTGAGATGAAAAGAGATT+GGG | - | tig0033735:14624-14643 | None:intergenic | 25.0% |
! | TTATTGAGATGAAAAGAGAT+TGG | - | tig0033735:14625-14644 | None:intergenic | 25.0% |
! | CATCTCAATAAAAATTCAGT+TGG | + | tig0033735:14634-14653 | Msa1452220:intron | 25.0% |
!!! | ATAAAAATTCAGTTGGTTTG+TGG | + | tig0033735:14641-14660 | Msa1452220:intron | 25.0% |
!!! | TAAAAATTCAGTTGGTTTGT+GGG | + | tig0033735:14642-14661 | Msa1452220:intron | 25.0% |
! | TATTGTTATGGGAAAATCTT+CGG | - | tig0033735:14789-14808 | None:intergenic | 25.0% |
! | AGTAAAAAGATAAGGACTTA+GGG | - | tig0033735:14831-14850 | None:intergenic | 25.0% |
! | AAGTAAAAAGATAAGGACTT+AGG | - | tig0033735:14832-14851 | None:intergenic | 25.0% |
! | ATATTTAAACCGTGTAACTT+GGG | - | tig0033735:15101-15120 | None:intergenic | 25.0% |
! | TTACACGGTTTAAATATCTT+GGG | + | tig0033735:15104-15123 | Msa1452220:intron | 25.0% |
!!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | tig0033735:15440-15459 | Msa1452220:intron | 25.0% |
! | AAAATAGGCTTAGATGATTT+GGG | + | tig0033735:15455-15474 | Msa1452220:intron | 25.0% |
! | AACCATTAGAAAAGATTTAG+AGG | + | tig0033735:15582-15601 | Msa1452220:intron | 25.0% |
! | GTTCTATCATAAACCAAATT+TGG | - | tig0033735:15622-15641 | None:intergenic | 25.0% |
! | TCTACTGATAGAAAACATAA+AGG | - | tig0033735:15734-15753 | None:intergenic | 25.0% |
! | ATAACATGATAGTCAAACTT+GGG | - | tig0033735:15839-15858 | None:intergenic | 25.0% |
! | AATAACATGATAGTCAAACT+TGG | - | tig0033735:15840-15859 | None:intergenic | 25.0% |
! | GAAAGTAAATAAACTCAATG+AGG | + | tig0033735:15866-15885 | Msa1452220:intron | 25.0% |
! | AAAATATGATTGTCACTGTT+GGG | - | tig0033735:16035-16054 | None:intergenic | 25.0% |
! | AAAAATATGATTGTCACTGT+TGG | - | tig0033735:16036-16055 | None:intergenic | 25.0% |
! | GAAGAAACAACATTAGAATT+TGG | - | tig0033735:16356-16375 | None:intergenic | 25.0% |
!!! | AAACATTTTGACTTATTTGC+AGG | + | tig0033735:16417-16436 | Msa1452220:intron | 25.0% |
! | TTTACTTGTTTATCATTTGC+TGG | - | tig0033735:16538-16557 | None:intergenic | 25.0% |
! | TGATAAACAAGTAAATACAC+TGG | + | tig0033735:16543-16562 | Msa1452220:intron | 25.0% |
!!! | ATTTATAGATTTTTGAGTGC+CGG | + | tig0033735:16703-16722 | Msa1452220:CDS | 25.0% |
!!! | TCTTGTGCATTTTATTGATT+TGG | + | tig0033735:16780-16799 | Msa1452220:intron | 25.0% |
!!! | AGGATTTTAAAACATGGAAT+AGG | - | tig0033735:16971-16990 | None:intergenic | 25.0% |
!!! | ATGAGTAGGATTTTAAAACA+TGG | - | tig0033735:16977-16996 | None:intergenic | 25.0% |
! | AAACAAATTATGACATGAGT+AGG | - | tig0033735:16991-17010 | None:intergenic | 25.0% |
!!! | CTCATGTCATAATTTGTTTA+TGG | + | tig0033735:16992-17011 | Msa1452220:intron | 25.0% |
! | CTCTAATAGAAAACTGTAAA+TGG | + | tig0033735:17359-17378 | Msa1452220:intron | 25.0% |
!! | TCACGATTTGAGATTATTTA+AGG | - | tig0033735:17651-17670 | None:intergenic | 25.0% |
! | TATAAGCCAATACTAATACA+TGG | + | tig0033735:18123-18142 | Msa1452220:intron | 25.0% |
! | ATAAGCCAATACTAATACAT+GGG | + | tig0033735:18124-18143 | Msa1452220:intron | 25.0% |
! | TATTGAAACTAACATCAGAT+AGG | + | tig0033735:18233-18252 | Msa1452220:intron | 25.0% |
! | ATTGAAACTAACATCAGATA+GGG | + | tig0033735:18234-18253 | Msa1452220:intron | 25.0% |
! | TTAACTAATTGAATTGGTAG+AGG | - | tig0033735:18331-18350 | None:intergenic | 25.0% |
! | CTGCTTGTTTATATTTCTTT+AGG | + | tig0033735:18516-18535 | Msa1452220:intron | 25.0% |
! | TCAGAGATTCATGAAAATAT+GGG | + | tig0033735:18539-18558 | Msa1452220:CDS | 25.0% |
! | TTGTATTCCTTTAAATCAAG+AGG | - | tig0033735:18828-18847 | None:intergenic | 25.0% |
!! | CTTGTAAATATTCTTTTTGC+AGG | + | tig0033735:18890-18909 | Msa1452220:intron | 25.0% |
!! | TAAATATTCTTTTTGCAGGT+AGG | + | tig0033735:18894-18913 | Msa1452220:intron | 25.0% |
!! | AAATATTCTTTTTGCAGGTA+GGG | + | tig0033735:18895-18914 | Msa1452220:intron | 25.0% |
! | CTACTTAAATCTTCTTCTAA+TGG | - | tig0033735:18924-18943 | None:intergenic | 25.0% |
! | TAGAAGAAGATTTAAGTAGT+TGG | + | tig0033735:18925-18944 | Msa1452220:CDS | 25.0% |
! | AGAAGAAGATTTAAGTAGTT+GGG | + | tig0033735:18926-18945 | Msa1452220:CDS | 25.0% |
! | GAAAATGTGTAAAAAAGCTA+TGG | - | tig0033735:19021-19040 | None:intergenic | 25.0% |
! | AATAATTAAAAAAGGGAAGG+GGG | - | tig0033735:19051-19070 | None:intergenic | 25.0% |
!!! | TTTTTTGTGGTGACATTAAA+TGG | - | tig0033735:19107-19126 | None:intergenic | 25.0% |
! | ATATTTCATTTACAAGAGAG+TGG | - | tig0033735:19522-19541 | None:intergenic | 25.0% |
! | TTTGGACATTAACGTAATAT+TGG | + | tig0033735:19642-19661 | Msa1452220:three_prime_UTR | 25.0% |
GATAAGGTTACCTTTGATTA+GGG | - | tig0033735:9823-9842 | None:intergenic | 30.0% | |
TCTGCATCAAATAAGTAGAA+AGG | - | tig0033735:10410-10429 | None:intergenic | 30.0% | |
TACTTATTTGATGCAGAGAA+GGG | + | tig0033735:10413-10432 | Msa1452220:intron | 30.0% | |
CAAAATGCATCCATTGATAT+TGG | - | tig0033735:10482-10501 | None:intergenic | 30.0% | |
! | CAATATCAATGGATGCATTT+TGG | + | tig0033735:10480-10499 | Msa1452220:CDS | 30.0% |
TTATTTGTCAAGGTTTCGAT+GGG | + | tig0033735:10655-10674 | Msa1452220:CDS | 30.0% | |
ACTTGTAAAACTGTTAATCC+CGG | - | tig0033735:10817-10836 | None:intergenic | 30.0% | |
AAGTAGCTCGTAATTAAGAA+CGG | - | tig0033735:10871-10890 | None:intergenic | 30.0% | |
TAAACTTCTCTGAATGCATT+CGG | - | tig0033735:10958-10977 | None:intergenic | 30.0% | |
TGATCAGACAATAACAAACA+AGG | + | tig0033735:11033-11052 | Msa1452220:CDS | 30.0% | |
AAATCAGAAACACAAGAGAA+GGG | - | tig0033735:11600-11619 | None:intergenic | 30.0% | |
AAAATCAGAAACACAAGAGA+AGG | - | tig0033735:11601-11620 | None:intergenic | 30.0% | |
!!! | TGTGTTTCTGATTTTGATTG+TGG | + | tig0033735:11606-11625 | Msa1452220:intron | 30.0% |
ATAAAGGCTCCAATAATTTG+CGG | + | tig0033735:11646-11665 | Msa1452220:intron | 30.0% | |
ATTAAGTGCCAAAGTTAATC+AGG | + | tig0033735:11726-11745 | Msa1452220:CDS | 30.0% | |
ATGCAATATTTCAGACAGTA+TGG | - | tig0033735:12030-12049 | None:intergenic | 30.0% | |
GAAAATGCAGAAGATAAGAT+TGG | - | tig0033735:12102-12121 | None:intergenic | 30.0% | |
ATTATCTAATGTATGGCGTA+GGG | - | tig0033735:12159-12178 | None:intergenic | 30.0% | |
TTGTGTATAAGTATAGCACA+TGG | - | tig0033735:12335-12354 | None:intergenic | 30.0% | |
AGAGATAATTATGCTGATCT+TGG | + | tig0033735:12421-12440 | Msa1452220:intron | 30.0% | |
GAGATAATTATGCTGATCTT+GGG | + | tig0033735:12422-12441 | Msa1452220:intron | 30.0% | |
TTACACATGGAGAAATCTTT+AGG | + | tig0033735:12486-12505 | Msa1452220:intron | 30.0% | |
!! | ATGGAGAAATCTTTAGGATT+TGG | + | tig0033735:12492-12511 | Msa1452220:intron | 30.0% |
! | ATAGAAGACACCTTTTATGA+AGG | + | tig0033735:12581-12600 | Msa1452220:intron | 30.0% |
!! | ACACCAACTTACTTTTATGA+AGG | + | tig0033735:12643-12662 | Msa1452220:intron | 30.0% |
ACACCTTCATAAAAGTAAGT+TGG | - | tig0033735:12649-12668 | None:intergenic | 30.0% | |
AAAGTGAAAATCACACCTTA+AGG | + | tig0033735:12691-12710 | Msa1452220:intron | 30.0% | |
! | TTTTAACAAGTCACACCTTA+AGG | - | tig0033735:12709-12728 | None:intergenic | 30.0% |
! | GTTTCTTTTCATGTGCTTTA+AGG | - | tig0033735:12848-12867 | None:intergenic | 30.0% |
CACATGAAAAGAAACTGTAT+TGG | + | tig0033735:12853-12872 | Msa1452220:intron | 30.0% | |
ATCTGTACCACAAAAGTAAA+AGG | - | tig0033735:12920-12939 | None:intergenic | 30.0% | |
AAAGTTATGCAATCATCCAA+AGG | + | tig0033735:13176-13195 | Msa1452220:CDS | 30.0% | |
!!! | TTTGTTTTTTGGATGATGGA+AGG | + | tig0033735:13214-13233 | Msa1452220:intron | 30.0% |
TGCAAGACATTATTATTGTG+AGG | - | tig0033735:13493-13512 | None:intergenic | 30.0% | |
ATATATGATACCATACGAAG+TGG | + | tig0033735:13517-13536 | Msa1452220:CDS | 30.0% | |
TATATGATACCATACGAAGT+GGG | + | tig0033735:13518-13537 | Msa1452220:CDS | 30.0% | |
CCACAATTTAGTCATTCTAA+GGG | + | tig0033735:13650-13669 | Msa1452220:intron | 30.0% | |
CACAATTTAGTCATTCTAAG+GGG | + | tig0033735:13651-13670 | Msa1452220:intron | 30.0% | |
! | ACAATTTAGTCATTCTAAGG+GGG | + | tig0033735:13652-13671 | Msa1452220:intron | 30.0% |
TCAAACTATACTCAGGTATA+TGG | + | tig0033735:13806-13825 | Msa1452220:intron | 30.0% | |
! | ATCAACAGCTTTTCAATTTG+GGG | - | tig0033735:14081-14100 | None:intergenic | 30.0% |
! | CATCAACAGCTTTTCAATTT+GGG | - | tig0033735:14082-14101 | None:intergenic | 30.0% |
GAAAAAGCAATTGGCAAATT+GGG | - | tig0033735:14271-14290 | None:intergenic | 30.0% | |
ACTATTAGTGGTAAAGTTGT+TGG | - | tig0033735:14345-14364 | None:intergenic | 30.0% | |
TTGACGGTTAAAACTATTAG+TGG | - | tig0033735:14357-14376 | None:intergenic | 30.0% | |
!!! | ACTAATAGTTTTAACCGTCA+AGG | + | tig0033735:14356-14375 | Msa1452220:intron | 30.0% |
AATTGTTAGTTAGACCTTGA+CGG | - | tig0033735:14373-14392 | None:intergenic | 30.0% | |
! | AATGAACATGAAAAGCATGT+TGG | + | tig0033735:14485-14504 | Msa1452220:intron | 30.0% |
!! | AAAAATTCAGTTGGTTTGTG+GGG | + | tig0033735:14643-14662 | Msa1452220:intron | 30.0% |
! | GAAGATTTTCCCATAACAAT+AGG | + | tig0033735:14788-14807 | Msa1452220:intron | 30.0% |
!!! | TTTAGTTTTGGATGTACTGA+CGG | + | tig0033735:14850-14869 | Msa1452220:intron | 30.0% |
TATATGGAATGTAACTTCAG+CGG | + | tig0033735:15025-15044 | Msa1452220:intron | 30.0% | |
TATTTAAACCGTGTAACTTG+GGG | - | tig0033735:15100-15119 | None:intergenic | 30.0% | |
GATATTTAAACCGTGTAACT+TGG | - | tig0033735:15102-15121 | None:intergenic | 30.0% | |
GTTACACGGTTTAAATATCT+TGG | + | tig0033735:15103-15122 | Msa1452220:intron | 30.0% | |
! | TCTACCAACTTTTCTACTAT+AGG | - | tig0033735:15436-15455 | None:intergenic | 30.0% |
GAAAATAGGCTTAGATGATT+TGG | + | tig0033735:15454-15473 | Msa1452220:intron | 30.0% | |
! | GTTTCTCTAATAGTTTTCCT+AGG | - | tig0033735:15565-15584 | None:intergenic | 30.0% |
! | GACCTCTAAATCTTTTCTAA+TGG | - | tig0033735:15587-15606 | None:intergenic | 30.0% |
TGGTTTATGATAGAACACTA+TGG | + | tig0033735:15626-15645 | Msa1452220:intron | 30.0% | |
! | TAGCACTGAATACTACTAAA+AGG | + | tig0033735:15971-15990 | Msa1452220:intron | 30.0% |
! | GACAATCATATTTTTCTACC+CGG | + | tig0033735:16041-16060 | Msa1452220:intron | 30.0% |
! | ATTTTTCTACCCGGTATATA+TGG | + | tig0033735:16050-16069 | Msa1452220:intron | 30.0% |
! | TTTTTCTACCCGGTATATAT+GGG | + | tig0033735:16051-16070 | Msa1452220:intron | 30.0% |
TGAATACGCATCTAATTGTA+AGG | - | tig0033735:16090-16109 | None:intergenic | 30.0% | |
GAAAGATTCAATTAGTCATG+AGG | - | tig0033735:16127-16146 | None:intergenic | 30.0% | |
AAGAAGTAGAACAGCAATAA+AGG | - | tig0033735:16157-16176 | None:intergenic | 30.0% | |
! | TTATTGCTGTTCTACTTCTT+TGG | + | tig0033735:16157-16176 | Msa1452220:intron | 30.0% |
AATCAGTAAAAGGCAAAAGT+TGG | + | tig0033735:16281-16300 | Msa1452220:CDS | 30.0% | |
! | AACCTTTTCTTCTATTGTTC+CGG | - | tig0033735:16725-16744 | None:intergenic | 30.0% |
! | CAATTTGTTTACTTTCGATG+AGG | + | tig0033735:17051-17070 | Msa1452220:CDS | 30.0% |
!!! | TATTAGAGAGTTTTTTCGTG+GGG | - | tig0033735:17347-17366 | None:intergenic | 30.0% |
!!! | CTATTAGAGAGTTTTTTCGT+GGG | - | tig0033735:17348-17367 | None:intergenic | 30.0% |
!!! | TCTATTAGAGAGTTTTTTCG+TGG | - | tig0033735:17349-17368 | None:intergenic | 30.0% |
AACTGAGTAACTGTTTAAAC+TGG | - | tig0033735:17553-17572 | None:intergenic | 30.0% | |
TTAAACAGTTACTCAGTTAC+AGG | + | tig0033735:17555-17574 | Msa1452220:intron | 30.0% | |
TAAACAGTTACTCAGTTACA+GGG | + | tig0033735:17556-17575 | Msa1452220:intron | 30.0% | |
!! | ATTTTGACCCCAAAATGTTA+AGG | + | tig0033735:17670-17689 | Msa1452220:intron | 30.0% |
! | TGCAAAGAATGATAACGAAT+GGG | + | tig0033735:17905-17924 | Msa1452220:intron | 30.0% |
ATGTACTATTTCCATGAGAT+GGG | + | tig0033735:18270-18289 | Msa1452220:intron | 30.0% | |
AAATGTATAATCCCATCTCA+TGG | - | tig0033735:18284-18303 | None:intergenic | 30.0% | |
TGTAGTTGATTGAATCAACT+TGG | + | tig0033735:18355-18374 | Msa1452220:intron | 30.0% | |
TAATGTTGATATTGATCGTC+TGG | + | tig0033735:18426-18445 | Msa1452220:intron | 30.0% | |
GTCAGAGATTCATGAAAATA+TGG | + | tig0033735:18538-18557 | Msa1452220:CDS | 30.0% | |
TCAATGATTAATAGCGAATG+TGG | + | tig0033735:18614-18633 | Msa1452220:CDS | 30.0% | |
TTTGAAAACATCAGAAAAGC+AGG | + | tig0033735:18694-18713 | Msa1452220:CDS | 30.0% | |
!!! | AGGTTGCTTTTGTATTTTGT+TGG | + | tig0033735:18714-18733 | Msa1452220:intron | 30.0% |
!! | AGTTGTTTTACTCTTTTGAG+TGG | + | tig0033735:18742-18761 | Msa1452220:intron | 30.0% |
!! | GTTGTTTTACTCTTTTGAGT+GGG | + | tig0033735:18743-18762 | Msa1452220:intron | 30.0% |
TATCTCACCTCTTGATTTAA+AGG | + | tig0033735:18818-18837 | Msa1452220:intron | 30.0% | |
GAAGAAGATTTAAGTAGTTG+GGG | + | tig0033735:18927-18946 | Msa1452220:CDS | 30.0% | |
TGGTGACATTAAATGGAATA+TGG | - | tig0033735:19100-19119 | None:intergenic | 30.0% | |
! | AATTCCTTTTTCTGTAGCTT+GGG | - | tig0033735:19247-19266 | None:intergenic | 30.0% |
! | TAATTCCTTTTTCTGTAGCT+TGG | - | tig0033735:19248-19267 | None:intergenic | 30.0% |
!! | TTCATTTACAAGAGAGTGTT+TGG | - | tig0033735:19455-19474 | None:intergenic | 30.0% |
!!! | TCAACATGACATGCTTTTTT+CGG | - | tig0033735:19547-19566 | None:intergenic | 30.0% |
! | GTATTCACACTCATCTATTT+TGG | + | tig0033735:19624-19643 | Msa1452220:three_prime_UTR | 30.0% |
TGACACTTCAACTTCTTCAT+CGG | - | tig0033735:9739-9758 | None:intergenic | 35.0% | |
AATGTAGAAGCCCTAATCAA+AGG | + | tig0033735:9810-9829 | Msa1452220:CDS | 35.0% | |
CGATAAGGTTACCTTTGATT+AGG | - | tig0033735:9824-9843 | None:intergenic | 35.0% | |
! | AAACGGTTTTCTGCAAATAG+CGG | - | tig0033735:9895-9914 | None:intergenic | 35.0% |
TTATCGTTGTAAGCATCAGA+TGG | - | tig0033735:9924-9943 | None:intergenic | 35.0% | |
TTCAAATCCAACTCAGTCAA+AGG | - | tig0033735:10041-10060 | None:intergenic | 35.0% | |
TATTAGAGGATCAATTCCAG+GGG | - | tig0033735:10111-10130 | None:intergenic | 35.0% | |
GTATTAGAGGATCAATTCCA+GGG | - | tig0033735:10112-10131 | None:intergenic | 35.0% | |
AGTATTAGAGGATCAATTCC+AGG | - | tig0033735:10113-10132 | None:intergenic | 35.0% | |
GAATTGATCCTCTAATACTC+TGG | + | tig0033735:10114-10133 | Msa1452220:CDS | 35.0% | |
GATACACTGTAGCCAATAAA+AGG | - | tig0033735:10243-10262 | None:intergenic | 35.0% | |
CATAGCAGTTGAGTGAATTA+GGG | - | tig0033735:10315-10334 | None:intergenic | 35.0% | |
ACATAGCAGTTGAGTGAATT+AGG | - | tig0033735:10316-10335 | None:intergenic | 35.0% | |
CTACTTATTTGATGCAGAGA+AGG | + | tig0033735:10412-10431 | Msa1452220:intron | 35.0% | |
ACTTATTTGATGCAGAGAAG+GGG | + | tig0033735:10414-10433 | Msa1452220:intron | 35.0% | |
!! | ATGCATTTTGGCAGATGATA+TGG | + | tig0033735:10492-10511 | Msa1452220:CDS | 35.0% |
!! | TGCATTTTGGCAGATGATAT+GGG | + | tig0033735:10493-10512 | Msa1452220:CDS | 35.0% |
CTTATTTGTCAAGGTTTCGA+TGG | + | tig0033735:10654-10673 | Msa1452220:CDS | 35.0% | |
GGAAGCAGAAATTAAGAAGT+GGG | + | tig0033735:10734-10753 | Msa1452220:CDS | 35.0% | |
ACAAGACAAGATGTTATCTC+CGG | + | tig0033735:10795-10814 | Msa1452220:CDS | 35.0% | |
TTTAACCTGGAATTTGCCTT+GGG | - | tig0033735:10841-10860 | None:intergenic | 35.0% | |
ATTTAACCTGGAATTTGCCT+TGG | - | tig0033735:10842-10861 | None:intergenic | 35.0% | |
AAAAACAACTCCCGATTTAC+AGG | + | tig0033735:10907-10926 | Msa1452220:intron | 35.0% | |
AAATATGCCTGTAAAGAGGA+AGG | - | tig0033735:11079-11098 | None:intergenic | 35.0% | |
TCAGAAATATGCCTGTAAAG+AGG | - | tig0033735:11083-11102 | None:intergenic | 35.0% | |
AGTCATTCACAAATACTTCC+TGG | + | tig0033735:11102-11121 | Msa1452220:intron | 35.0% | |
TCACAAATACTTCCTGGATT+AGG | + | tig0033735:11108-11127 | Msa1452220:intron | 35.0% | |
AGCAAAACTCTACGTTTACA+CGG | - | tig0033735:11148-11167 | None:intergenic | 35.0% | |
CTTGGAAGAATTCTTTGCAA+TGG | + | tig0033735:11290-11309 | Msa1452220:CDS | 35.0% | |
!! | ACATTTTCGACGTTACTTTG+AGG | + | tig0033735:11350-11369 | Msa1452220:CDS | 35.0% |
!!! | TTCTGGAAGCTTTTTGAAGT+TGG | - | tig0033735:11554-11573 | None:intergenic | 35.0% |
CGTTCTAGCATCATATATTC+TGG | - | tig0033735:11571-11590 | None:intergenic | 35.0% | |
CATATTAGCAAGTCAACTTC+AGG | - | tig0033735:11923-11942 | None:intergenic | 35.0% | |
GATTATCTAATGTATGGCGT+AGG | - | tig0033735:12160-12179 | None:intergenic | 35.0% | |
TTCTCATGCAGATATCTTGA+GGG | - | tig0033735:12297-12316 | None:intergenic | 35.0% | |
CTAATCTTATTCTTATCCCG+CGG | + | tig0033735:12369-12388 | Msa1452220:intron | 35.0% | |
TTGTTAAAAGACACCACCAA+AGG | + | tig0033735:12720-12739 | Msa1452220:intron | 35.0% | |
TGTTAAAAGACACCACCAAA+GGG | + | tig0033735:12721-12740 | Msa1452220:intron | 35.0% | |
GGAAACAGATTTATCTATGC+AGG | - | tig0033735:13081-13100 | None:intergenic | 35.0% | |
! | ACTGAAGCAATCGAAGATTT+TGG | + | tig0033735:13134-13153 | Msa1452220:CDS | 35.0% |
!! | GAAGATTTTGGCCTACATTA+CGG | + | tig0033735:13146-13165 | Msa1452220:CDS | 35.0% |
!!! | CTTTTTTAGAGCCGTAATGT+AGG | - | tig0033735:13160-13179 | None:intergenic | 35.0% |
!! | ATTGCTTTTGTCTATACGCT+TGG | + | tig0033735:13244-13263 | Msa1452220:intron | 35.0% |
! | AAGGATCATAAGTTGAGAGA+AGG | - | tig0033735:13397-13416 | None:intergenic | 35.0% |
AACAACCAACCAGAAATGTA+AGG | - | tig0033735:13457-13476 | None:intergenic | 35.0% | |
ACATATTTGGAGGGAAGAAT+CGG | - | tig0033735:13576-13595 | None:intergenic | 35.0% | |
TTCCCTCCAAATATGTTATC+TGG | + | tig0033735:13580-13599 | Msa1452220:CDS | 35.0% | |
GTCCAGATAACATATTTGGA+GGG | - | tig0033735:13585-13604 | None:intergenic | 35.0% | |
CTCCAAATATGTTATCTGGA+CGG | + | tig0033735:13584-13603 | Msa1452220:CDS | 35.0% | |
TACCGTCCAGATAACATATT+TGG | - | tig0033735:13589-13608 | None:intergenic | 35.0% | |
GCCACAATTTAGTCATTCTA+AGG | + | tig0033735:13649-13668 | Msa1452220:intron | 35.0% | |
CCCTTAGAATGACTAAATTG+TGG | - | tig0033735:13653-13672 | None:intergenic | 35.0% | |
TCAGGTATATGGTAACAATC+TGG | + | tig0033735:13817-13836 | Msa1452220:intron | 35.0% | |
! | TCAACAGCTTTTCAATTTGG+GGG | - | tig0033735:14080-14099 | None:intergenic | 35.0% |
! | CCATCAACAGCTTTTCAATT+TGG | - | tig0033735:14083-14102 | None:intergenic | 35.0% |
CCAAATTGAAAAGCTGTTGA+TGG | + | tig0033735:14080-14099 | Msa1452220:intron | 35.0% | |
! | ACGATACTGTTTTCGACAAT+AGG | + | tig0033735:14111-14130 | Msa1452220:intron | 35.0% |
! | TTGGCAAATTGGGTAGTTTT+GGG | - | tig0033735:14261-14280 | None:intergenic | 35.0% |
! | ATTGGCAAATTGGGTAGTTT+TGG | - | tig0033735:14262-14281 | None:intergenic | 35.0% |
GGAAAAAGCAATTGGCAAAT+TGG | - | tig0033735:14272-14291 | None:intergenic | 35.0% | |
CTTCTTAACATATACTGGTG+AGG | + | tig0033735:14435-14454 | Msa1452220:intron | 35.0% | |
GGTTAGGATTGCCTATATTA+GGG | + | tig0033735:14706-14725 | Msa1452220:intron | 35.0% | |
! | ATCCTTGATAGCCCTAATAT+AGG | - | tig0033735:14720-14739 | None:intergenic | 35.0% |
GCTATCAAGGATATGTTTGA+GGG | + | tig0033735:14728-14747 | Msa1452220:intron | 35.0% | |
TGGTGCAATCCTATTGTTAT+GGG | - | tig0033735:14800-14819 | None:intergenic | 35.0% | |
TTGGTGCAATCCTATTGTTA+TGG | - | tig0033735:14801-14820 | None:intergenic | 35.0% | |
ATAACAATAGGATTGCACCA+AGG | + | tig0033735:14800-14819 | Msa1452220:intron | 35.0% | |
TAACAATAGGATTGCACCAA+GGG | + | tig0033735:14801-14820 | Msa1452220:intron | 35.0% | |
! | TCTGCAAAAAGCATACATCT+CGG | - | tig0033735:14896-14915 | None:intergenic | 35.0% |
TAGAAGCAAGACGAAGTATA+TGG | + | tig0033735:15009-15028 | Msa1452220:intron | 35.0% | |
ATATCATACCCCAAGTTACA+CGG | + | tig0033735:15089-15108 | Msa1452220:intron | 35.0% | |
TAAGCCATCATATTCAAGCT+GGG | + | tig0033735:15164-15183 | Msa1452220:intron | 35.0% | |
AACTTTCCTTTCAGCTTAAG+TGG | - | tig0033735:15238-15257 | None:intergenic | 35.0% | |
AGCTGAAAGGAAAGTTCTAT+CGG | + | tig0033735:15242-15261 | Msa1452220:intron | 35.0% | |
AAGTAAGTGTAGTAGAGATG+AGG | + | tig0033735:15332-15351 | Msa1452220:intron | 35.0% | |
GATTAGGAATGACACCATTA+GGG | + | tig0033735:15393-15412 | Msa1452220:intron | 35.0% | |
AGCACCTATAGTAGAAAAGT+TGG | + | tig0033735:15429-15448 | Msa1452220:intron | 35.0% | |
TTGATCTACTCTTCTTACCA+CGG | - | tig0033735:15506-15525 | None:intergenic | 35.0% | |
GGTAAGAAGAGTAGATCAAA+TGG | + | tig0033735:15507-15526 | Msa1452220:intron | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | + | tig0033735:15510-15529 | Msa1452220:intron | 35.0% | |
AGTCAAGTTAAAAGAGGTAG+AGG | + | tig0033735:15535-15554 | Msa1452220:intron | 35.0% | |
AGATTTAGAGGTCAATGAGT+TGG | + | tig0033735:15594-15613 | Msa1452220:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATT+TGG | + | tig0033735:15606-15625 | Msa1452220:intron | 35.0% |
! | TGTTGTTGTTGTTGTGTTTG+TGG | + | tig0033735:15704-15723 | Msa1452220:intron | 35.0% |
! | GTTGTTGTTGTTGTGTTTGT+GGG | + | tig0033735:15705-15724 | Msa1452220:intron | 35.0% |
! | TTGTTGTTGTTGTGTTTGTG+GGG | + | tig0033735:15706-15725 | Msa1452220:intron | 35.0% |
! | GTAGATTCTGAGTTGAATCA+AGG | + | tig0033735:15749-15768 | Msa1452220:intron | 35.0% |
CCTTCATGATTAATTGCATG+TGG | - | tig0033735:15777-15796 | None:intergenic | 35.0% | |
CCACATGCAATTAATCATGA+AGG | + | tig0033735:15774-15793 | Msa1452220:intron | 35.0% | |
! | ATTTTCTCTTGACTGTTCTC+TGG | + | tig0033735:15907-15926 | Msa1452220:intron | 35.0% |
TTTATCAGACAAAAGCTTGC+TGG | + | tig0033735:15931-15950 | Msa1452220:intron | 35.0% | |
! | TTATCAGACAAAAGCTTGCT+GGG | + | tig0033735:15932-15951 | Msa1452220:intron | 35.0% |
AGATCAAGAGTCTGTTACAT+GGG | - | tig0033735:16201-16220 | None:intergenic | 35.0% | |
AAGATCAAGAGTCTGTTACA+TGG | - | tig0033735:16202-16221 | None:intergenic | 35.0% | |
! | ATCTTTTTGCTCAATTGTGC+CGG | + | tig0033735:16217-16236 | Msa1452220:CDS | 35.0% |
CAAAGGATAATCGCATGTAT+TGG | - | tig0033735:16393-16412 | None:intergenic | 35.0% | |
! | TGTTTTTCTCTTAAGCAGCA+AGG | + | tig0033735:16447-16466 | Msa1452220:CDS | 35.0% |
GTTGTGGACTCAATTTGATT+GGG | + | tig0033735:16476-16495 | Msa1452220:CDS | 35.0% | |
TTGTGGACTCAATTTGATTG+GGG | + | tig0033735:16477-16496 | Msa1452220:CDS | 35.0% | |
TACCATTCCTAACCATTAAC+AGG | + | tig0033735:16636-16655 | Msa1452220:intron | 35.0% | |
TGACAGAAATAGCTCAATGA+AGG | - | tig0033735:16814-16833 | None:intergenic | 35.0% | |
GGCATATTATTCTCAACAAG+AGG | + | tig0033735:17250-17269 | Msa1452220:intron | 35.0% | |
!!! | TTTTTGGTTGCAGTTACAAG+AGG | + | tig0033735:17447-17466 | Msa1452220:intron | 35.0% |
! | GTGCAAAGAATGATAACGAA+TGG | + | tig0033735:17904-17923 | Msa1452220:intron | 35.0% |
! | TATCATGAGCTCCTGATTTT+GGG | - | tig0033735:18031-18050 | None:intergenic | 35.0% |
TAGTCTGTATTAGTTGTCAC+AGG | - | tig0033735:18163-18182 | None:intergenic | 35.0% | |
GATGTACTATTTCCATGAGA+TGG | + | tig0033735:18269-18288 | Msa1452220:intron | 35.0% | |
TTGATATTGATCGTCTGGTA+GGG | + | tig0033735:18431-18450 | Msa1452220:intron | 35.0% | |
TGATAGACAGTCGTGAATAT+TGG | - | tig0033735:18469-18488 | None:intergenic | 35.0% | |
CTTATTGCGTAAAGCAAAAG+GGG | - | tig0033735:19305-19324 | None:intergenic | 35.0% | |
GCTTATTGCGTAAAGCAAAA+GGG | - | tig0033735:19306-19325 | None:intergenic | 35.0% | |
AGCTTATTGCGTAAAGCAAA+AGG | - | tig0033735:19307-19326 | None:intergenic | 35.0% | |
!! | AATACTTCATGTTTTTGCCC+AGG | + | tig0033735:19590-19609 | Msa1452220:exon | 35.0% |
GAATACATCAAACCAAACCT+GGG | - | tig0033735:19610-19629 | None:intergenic | 35.0% | |
TGAATACATCAAACCAAACC+TGG | - | tig0033735:19611-19630 | None:intergenic | 35.0% | |
ACGATTGTCTCTTGACGATA+AGG | - | tig0033735:9839-9858 | None:intergenic | 40.0% | |
CCATTGGTGGAATATACTCT+CGG | - | tig0033735:9867-9886 | None:intergenic | 40.0% | |
! | GCATCAGATGGTGGTTTAAA+CGG | - | tig0033735:9912-9931 | None:intergenic | 40.0% |
GTAAACAAGATCTTGCTCGT+AGG | + | tig0033735:9946-9965 | Msa1452220:CDS | 40.0% | |
GAATATCTCCGATCACAAAG+AGG | + | tig0033735:10058-10077 | Msa1452220:CDS | 40.0% | |
ATTAGAGGATCAATTCCAGG+GGG | - | tig0033735:10110-10129 | None:intergenic | 40.0% | |
ACGAACAAGCAAAGGATCAA+CGG | - | tig0033735:10177-10196 | None:intergenic | 40.0% | |
! | AAGGATTAGTACCTCTGATG+TGG | - | tig0033735:10209-10228 | None:intergenic | 40.0% |
TTCATGTTTGATTGTGTCGC+TGG | + | tig0033735:10442-10461 | Msa1452220:CDS | 40.0% | |
TGTGAGACACCCAATATCAA+TGG | + | tig0033735:10469-10488 | Msa1452220:CDS | 40.0% | |
!! | GCATTTTGGCAGATGATATG+GGG | + | tig0033735:10494-10513 | Msa1452220:CDS | 40.0% |
AATTTCTGCGCACTTACCTA+GGG | + | tig0033735:10563-10582 | Msa1452220:intron | 40.0% | |
ATGATGGCCTTTCTAACCAT+AGG | - | tig0033735:10684-10703 | None:intergenic | 40.0% | |
TACCAGTCTCGTTAGCAATT+GGG | + | tig0033735:10713-10732 | Msa1452220:CDS | 40.0% | |
GGGAAGCAGAAATTAAGAAG+TGG | + | tig0033735:10733-10752 | Msa1452220:CDS | 40.0% | |
GCAGAAATTAAGAAGTGGGT+TGG | + | tig0033735:10738-10757 | Msa1452220:CDS | 40.0% | |
TGGTTTCACAAAGAGCAACA+AGG | - | tig0033735:10776-10795 | None:intergenic | 40.0% | |
GGAGATAACATCTTGTCTTG+TGG | - | tig0033735:10796-10815 | None:intergenic | 40.0% | |
CAAGACAAGATGTTATCTCC+GGG | + | tig0033735:10796-10815 | Msa1452220:CDS | 40.0% | |
! | AACAGTTTTACAAGTCCCCA+AGG | + | tig0033735:10822-10841 | Msa1452220:CDS | 40.0% |
TTAACCTGGAATTTGCCTTG+GGG | - | tig0033735:10840-10859 | None:intergenic | 40.0% | |
GAACGGTTGAGAATTTAACC+TGG | - | tig0033735:10854-10873 | None:intergenic | 40.0% | |
TACGAGCTACTTACGTACTT+AGG | + | tig0033735:10879-10898 | Msa1452220:intron | 40.0% | |
AACAACGAGCACCTGTAAAT+CGG | - | tig0033735:10921-10940 | None:intergenic | 40.0% | |
!! | TCAGAGAAGTTTAGCTCTAG+TGG | + | tig0033735:10965-10984 | Msa1452220:CDS | 40.0% |
! | ATACTTCCTGGATTAGGCAT+TGG | + | tig0033735:11114-11133 | Msa1452220:intron | 40.0% |
GCAAAACTCTACGTTTACAC+GGG | - | tig0033735:11147-11166 | None:intergenic | 40.0% | |
!! | AAACGTAGAGTTTTGCTGTC+AGG | + | tig0033735:11151-11170 | Msa1452220:CDS | 40.0% |
ACAACACAGACAGGTAATTG+TGG | - | tig0033735:11202-11221 | None:intergenic | 40.0% | |
TTGTAACTCACAACACAGAC+AGG | - | tig0033735:11211-11230 | None:intergenic | 40.0% | |
ACTAATCCTGGAATATTGGG+CGG | + | tig0033735:11321-11340 | Msa1452220:CDS | 40.0% | |
CTTTATGATGCAGAGCAAGT+AGG | - | tig0033735:11632-11651 | None:intergenic | 40.0% | |
CTACTTGCTCTGCATCATAA+AGG | + | tig0033735:11630-11649 | Msa1452220:intron | 40.0% | |
GGTTCTCTTCCGCAAATTAT+TGG | - | tig0033735:11658-11677 | None:intergenic | 40.0% | |
ACTGCAGAAGAGAAGAAACT+CGG | + | tig0033735:11685-11704 | Msa1452220:CDS | 40.0% | |
! | AGCTTTCTGAAAGTACACAG+TGG | - | tig0033735:11789-11808 | None:intergenic | 40.0% |
! | ACAACATCAAGGACTAGTGA+TGG | - | tig0033735:11822-11841 | None:intergenic | 40.0% |
CAACTTCAGGAGAGTAAACA+CGG | - | tig0033735:11910-11929 | None:intergenic | 40.0% | |
ATCAAATCACTTACCACCGA+AGG | + | tig0033735:11981-12000 | Msa1452220:CDS | 40.0% | |
GTAAAATACACTACCTTCGG+TGG | - | tig0033735:11997-12016 | None:intergenic | 40.0% | |
ATGCAGATATCTTGAGGGAT+TGG | - | tig0033735:12292-12311 | None:intergenic | 40.0% | |
GTTCTCATGCAGATATCTTG+AGG | - | tig0033735:12298-12317 | None:intergenic | 40.0% | |
CGCGGGATAAGAATAAGATT+AGG | - | tig0033735:12371-12390 | None:intergenic | 40.0% | |
TATTGGATGAGAAACTTCCG+CGG | - | tig0033735:12389-12408 | None:intergenic | 40.0% | |
TGACATCTGATTCCATGAGA+AGG | + | tig0033735:12518-12537 | Msa1452220:intron | 40.0% | |
ATCTGATTCCATGAGAAGGT+AGG | + | tig0033735:12522-12541 | Msa1452220:intron | 40.0% | |
! | TTTTGTTACAAGCCACCCTT+TGG | - | tig0033735:12739-12758 | None:intergenic | 40.0% |
TATCACCTGGACTGAATACA+AGG | + | tig0033735:12821-12840 | Msa1452220:intron | 40.0% | |
ACCACAAAAGTAAAAGGCCA+CGG | - | tig0033735:12914-12933 | None:intergenic | 40.0% | |
AAATCTGTTTCCTCAAACGC+AGG | + | tig0033735:13089-13108 | Msa1452220:intron | 40.0% | |
TTCCTCAAACGCAGGTTAAA+CGG | + | tig0033735:13097-13116 | Msa1452220:intron | 40.0% | |
AGTTCGTGAAGCTCTTCTAT+AGG | + | tig0033735:13318-13337 | Msa1452220:intron | 40.0% | |
CCAGAAATGTAAGGAGAAGA+TGG | - | tig0033735:13448-13467 | None:intergenic | 40.0% | |
CCATCTTCTCCTTACATTTC+TGG | + | tig0033735:13445-13464 | Msa1452220:intron | 40.0% | |
!! | CTTCTCCTTACATTTCTGGT+TGG | + | tig0033735:13449-13468 | Msa1452220:intron | 40.0% |
CGTCCAGATAACATATTTGG+AGG | - | tig0033735:13586-13605 | None:intergenic | 40.0% | |
CTAAGGGGGATATTCTTTGT+AGG | + | tig0033735:13666-13685 | Msa1452220:intron | 40.0% | |
TTCTTTGTAGGTCTGGATCA+TGG | + | tig0033735:13678-13697 | Msa1452220:intron | 40.0% | |
TTCCGGTAAAATGCAAGTCT+TGG | + | tig0033735:13730-13749 | Msa1452220:CDS | 40.0% | |
! | TGCCAAGACTTGCATTTTAC+CGG | - | tig0033735:13735-13754 | None:intergenic | 40.0% |
GTAAAATGCAAGTCTTGGCA+AGG | + | tig0033735:13735-13754 | Msa1452220:CDS | 40.0% | |
CAATGCGATCATTTGTTCTC+TGG | - | tig0033735:13778-13797 | None:intergenic | 40.0% | |
! | CCTGAGTATAGTTTGAGACA+AGG | - | tig0033735:13802-13821 | None:intergenic | 40.0% |
CCTTGTCTCAAACTATACTC+AGG | + | tig0033735:13799-13818 | Msa1452220:CDS | 40.0% | |
! | TGATATAAGGGTGTGATTGC+TGG | - | tig0033735:13862-13881 | None:intergenic | 40.0% |
CAATGTGCTGTATCCATATC+AGG | + | tig0033735:13893-13912 | Msa1452220:intron | 40.0% | |
! | AAGTTCTAACCAGCCTGATA+TGG | - | tig0033735:13909-13928 | None:intergenic | 40.0% |
ACTCCTCTTACTCTGCATTA+TGG | + | tig0033735:14168-14187 | Msa1452220:intron | 40.0% | |
CTTCCATAATGCAGAGTAAG+AGG | - | tig0033735:14174-14193 | None:intergenic | 40.0% | |
TCAGGTACTCAAATCAATGG+AGG | - | tig0033735:14233-14252 | None:intergenic | 40.0% | |
!!! | AAATTGGGTAGTTTTGGGTG+GGG | - | tig0033735:14256-14275 | None:intergenic | 40.0% |
!!! | CAAATTGGGTAGTTTTGGGT+GGG | - | tig0033735:14257-14276 | None:intergenic | 40.0% |
GAGGATGGAAGGAGAAAATT+AGG | - | tig0033735:14293-14312 | None:intergenic | 40.0% | |
GCTTTCCACAAAATCTCTCT+CGG | - | tig0033735:14671-14690 | None:intergenic | 40.0% | |
GGGTTAGGATTGCCTATATT+AGG | + | tig0033735:14705-14724 | Msa1452220:intron | 40.0% | |
TGCCTATATTAGGGCTATCA+AGG | + | tig0033735:14715-14734 | Msa1452220:intron | 40.0% | |
GGCTATCAAGGATATGTTTG+AGG | + | tig0033735:14727-14746 | Msa1452220:intron | 40.0% | |
GGGTCCATAGTACAAAATGA+CGG | + | tig0033735:15124-15143 | Msa1452220:intron | 40.0% | |
!! | TTCGCCGTCATTTTGTACTA+TGG | - | tig0033735:15131-15150 | None:intergenic | 40.0% |
GTAAGCCATCATATTCAAGC+TGG | + | tig0033735:15163-15182 | Msa1452220:intron | 40.0% | |
! | AGAGTACCACTTAAGCTGAA+AGG | + | tig0033735:15229-15248 | Msa1452220:intron | 40.0% |
AGACTCGACATGATAGGATT+AGG | + | tig0033735:15377-15396 | Msa1452220:intron | 40.0% | |
GGATTAGGAATGACACCATT+AGG | + | tig0033735:15392-15411 | Msa1452220:intron | 40.0% | |
GAGGAGAGTCAAGTTAAAAG+AGG | + | tig0033735:15529-15548 | Msa1452220:intron | 40.0% | |
AAAGAGGTAGAGGAAAACCT+AGG | + | tig0033735:15545-15564 | Msa1452220:intron | 40.0% | |
ATCACAGCTACAACCTACAA+TGG | + | tig0033735:15811-15830 | Msa1452220:intron | 40.0% | |
AGCTTGAACCCATATATACC+GGG | - | tig0033735:16062-16081 | None:intergenic | 40.0% | |
GAGCTTGAACCCATATATAC+CGG | - | tig0033735:16063-16082 | None:intergenic | 40.0% | |
! | TCTTTTTGCTCAATTGTGCC+GGG | + | tig0033735:16218-16237 | Msa1452220:CDS | 40.0% |
GCGCTACATCAATCAGTAAA+AGG | + | tig0033735:16271-16290 | Msa1452220:CDS | 40.0% | |
GGTTGTGGACTCAATTTGAT+TGG | + | tig0033735:16475-16494 | Msa1452220:CDS | 40.0% | |
!! | TCGTCTTGTTTGATCCTGAT+TGG | + | tig0033735:16509-16528 | Msa1452220:CDS | 40.0% |
! | TCATTTGCTGGATTCCAATC+AGG | - | tig0033735:16526-16545 | None:intergenic | 40.0% |
TGCCGGAACAATAGAAGAAA+AGG | + | tig0033735:16720-16739 | Msa1452220:CDS | 40.0% | |
! | GCAGCATTAACTTGAACACA+GGG | - | tig0033735:16949-16968 | None:intergenic | 40.0% |
GCCATATTATTCTCAACACG+AGG | + | tig0033735:17187-17206 | Msa1452220:intron | 40.0% | |
GCCTCGTGTTGAGAATAATA+TGG | - | tig0033735:17191-17210 | None:intergenic | 40.0% | |
CGACAATGGAGAACAAATGA+CGG | + | tig0033735:17310-17329 | Msa1452220:intron | 40.0% | |
GACAATGGAGAACAAATGAC+GGG | + | tig0033735:17311-17330 | Msa1452220:intron | 40.0% | |
AATCTAGTGCAGAACCTCTA+TGG | + | tig0033735:17584-17603 | Msa1452220:intron | 40.0% | |
GATCATTGTGATCACCATAG+AGG | - | tig0033735:17601-17620 | None:intergenic | 40.0% | |
!! | TTTGGGGTCAGTTTTCTCAT+CGG | - | tig0033735:17703-17722 | None:intergenic | 40.0% |
! | AACCAAGAAGCATGTAACCA+GGG | - | tig0033735:17802-17821 | None:intergenic | 40.0% |
AAAAATCTGGGTAAGGTGGT+CGG | + | tig0033735:17842-17861 | Msa1452220:intron | 40.0% | |
ACGACCTACAGGAAACAAAT+GGG | + | tig0033735:17946-17965 | Msa1452220:intron | 40.0% | |
! | ATCATGAGCTCCTGATTTTG+GGG | - | tig0033735:18030-18049 | None:intergenic | 40.0% |
! | GTATCATGAGCTCCTGATTT+TGG | - | tig0033735:18032-18051 | None:intergenic | 40.0% |
TCCAGCCCATGTATTAGTAT+TGG | - | tig0033735:18132-18151 | None:intergenic | 40.0% | |
ACTAACATCAGATAGGGATC+TGG | + | tig0033735:18240-18259 | Msa1452220:intron | 40.0% | |
GTTGATATTGATCGTCTGGT+AGG | + | tig0033735:18430-18449 | Msa1452220:intron | 40.0% | |
AGTCGTTGCCAAAACAATGA+TGG | + | tig0033735:18566-18585 | Msa1452220:CDS | 40.0% | |
GTCGTTGCCAAAACAATGAT+GGG | + | tig0033735:18567-18586 | Msa1452220:CDS | 40.0% | |
GATGATGAAACCGCTGATAT+AGG | + | tig0033735:18638-18657 | Msa1452220:CDS | 40.0% | |
AGCAAATCCACCTATATCAG+CGG | - | tig0033735:18651-18670 | None:intergenic | 40.0% | |
!! | GTTTTACTCTTTTGAGTGGG+AGG | + | tig0033735:18746-18765 | Msa1452220:intron | 40.0% |
AGATAGACAGGAAAGCTAGT+AGG | - | tig0033735:18803-18822 | None:intergenic | 40.0% | |
AATCAAGAGGTGAGATAGAC+AGG | - | tig0033735:18815-18834 | None:intergenic | 40.0% | |
ATTAAAAAAGGGAAGGGGGT+GGG | - | tig0033735:19047-19066 | None:intergenic | 40.0% | |
AATTAAAAAAGGGAAGGGGG+TGG | - | tig0033735:19048-19067 | None:intergenic | 40.0% | |
! | GTCTTCACAAACCAAGTTGA+TGG | + | tig0033735:19193-19212 | Msa1452220:CDS | 40.0% |
!! | AAACCAAGTTGATGGAAAGC+TGG | + | tig0033735:19201-19220 | Msa1452220:CDS | 40.0% |
TTTCTGTAGCTTGGGACTTA+TGG | - | tig0033735:19239-19258 | None:intergenic | 40.0% | |
AAGTCCCAAGCTACAGAAAA+AGG | + | tig0033735:19240-19259 | Msa1452220:CDS | 40.0% | |
ATATTGGATGCAGAACGTAG+TGG | - | tig0033735:19334-19353 | None:intergenic | 40.0% | |
GCATGACACATTGGCAATAT+TGG | - | tig0033735:19350-19369 | None:intergenic | 40.0% | |
GGTGTTTAATGCTACACTCA+TGG | - | tig0033735:19434-19453 | None:intergenic | 40.0% | |
! | GGGTATGATCTTTTCTGTCT+TGG | - | tig0033735:19481-19500 | None:intergenic | 40.0% |
!! | TTCATGTTTTTGCCCAGGTT+TGG | + | tig0033735:19595-19614 | Msa1452220:three_prime_UTR | 40.0% |
! | CCGAGAGTATATTCCACCAA+TGG | + | tig0033735:9864-9883 | Msa1452220:CDS | 45.0% |
TCGTTGTAAGCATCAGATGG+TGG | - | tig0033735:9921-9940 | None:intergenic | 45.0% | |
TCGCAAAAGGTTTGTCCCAT+GGG | + | tig0033735:9977-9996 | Msa1452220:CDS | 45.0% | |
GGTGGGAATAGAAATAGGAG+TGG | - | tig0033735:10009-10028 | None:intergenic | 45.0% | |
ATCCAACTCAGTCAAAGGTG+TGG | - | tig0033735:10036-10055 | None:intergenic | 45.0% | |
TATCTCCGATCACAAAGAGG+AGG | + | tig0033735:10061-10080 | Msa1452220:CDS | 45.0% | |
! | AGAGGTTGCCAGAGTATTAG+AGG | - | tig0033735:10125-10144 | None:intergenic | 45.0% |
CGAAGGAAACGAACAAGCAA+AGG | - | tig0033735:10185-10204 | None:intergenic | 45.0% | |
CAACTGCTATGTAGTTGCAG+AGG | + | tig0033735:10324-10343 | Msa1452220:intron | 45.0% | |
! | TTTTGGCAGATGATATGGGG+TGG | + | tig0033735:10497-10516 | Msa1452220:CDS | 45.0% |
TTTGGCAGATGATATGGGGT+GGG | + | tig0033735:10498-10517 | Msa1452220:CDS | 45.0% | |
CAATTTCTGCGCACTTACCT+AGG | + | tig0033735:10562-10581 | Msa1452220:intron | 45.0% | |
TGGGAAGCCTATGGTTAGAA+AGG | + | tig0033735:10674-10693 | Msa1452220:CDS | 45.0% | |
CAATTGCTAACGAGACTGGT+AGG | - | tig0033735:10714-10733 | None:intergenic | 45.0% | |
CTACCAGTCTCGTTAGCAAT+TGG | + | tig0033735:10712-10731 | Msa1452220:CDS | 45.0% | |
TTCCCAATTGCTAACGAGAC+TGG | - | tig0033735:10718-10737 | None:intergenic | 45.0% | |
ACAACGAGCACCTGTAAATC+GGG | - | tig0033735:10920-10939 | None:intergenic | 45.0% | |
CTTCCAAGTCATTCTGCAAG+TGG | - | tig0033735:11278-11297 | None:intergenic | 45.0% | |
GGAATCTAATTCACACGCTC+AGG | - | tig0033735:11768-11787 | None:intergenic | 45.0% | |
TTGTAACCCTGCTGGTAAAC+TGG | + | tig0033735:11838-11857 | Msa1452220:intron | 45.0% | |
ATTGGATGAGAAACTTCCGC+GGG | - | tig0033735:12388-12407 | None:intergenic | 45.0% | |
TAAAAGACACCACCAAAGGG+TGG | + | tig0033735:12724-12743 | Msa1452220:intron | 45.0% | |
AAGGACCTTGTATTCAGTCC+AGG | - | tig0033735:12829-12848 | None:intergenic | 45.0% | |
TCCTCTTAATCTCGTAACCG+TGG | + | tig0033735:12894-12913 | Msa1452220:intron | 45.0% | |
!! | ACCGTGGCCTTTTACTTTTG+TGG | + | tig0033735:12910-12929 | Msa1452220:intron | 45.0% |
TCCTCAAACGCAGGTTAAAC+GGG | + | tig0033735:13098-13117 | Msa1452220:intron | 45.0% | |
CCTCAAAACCTGAAGTTCCT+GGG | - | tig0033735:13546-13565 | None:intergenic | 45.0% | |
TCCTCAAAACCTGAAGTTCC+TGG | - | tig0033735:13547-13566 | None:intergenic | 45.0% | |
GGGGATATTCTTTGTAGGTC+TGG | + | tig0033735:13671-13690 | Msa1452220:intron | 45.0% | |
AATGCGATCTAGATTCACCC+AGG | - | tig0033735:14040-14059 | None:intergenic | 45.0% | |
CCATTTGCATCTCTGCACTT+TGG | - | tig0033735:14198-14217 | None:intergenic | 45.0% | |
CCAAAGTGCAGAGATGCAAA+TGG | + | tig0033735:14195-14214 | Msa1452220:intron | 45.0% | |
GGGTCAGGTACTCAAATCAA+TGG | - | tig0033735:14236-14255 | None:intergenic | 45.0% | |
!!! | GCAAATTGGGTAGTTTTGGG+TGG | - | tig0033735:14258-14277 | None:intergenic | 45.0% |
TTGAAAAGAAGCGGCACACT+TGG | + | tig0033735:14391-14410 | Msa1452220:intron | 45.0% | |
! | AGAGATTTTGTGGAAAGCCC+TGG | + | tig0033735:14673-14692 | Msa1452220:intron | 45.0% |
! | GCAGATGATGTAGTCTTGCT+TGG | + | tig0033735:14911-14930 | Msa1452220:intron | 45.0% |
! | TAGTCTTGCTTGGTGAGTTG+AGG | + | tig0033735:14921-14940 | Msa1452220:intron | 45.0% |
! | AGTCTTGCTTGGTGAGTTGA+GGG | + | tig0033735:14922-14941 | Msa1452220:intron | 45.0% |
GAGTTGAGGGAGGAATTGAA+CGG | + | tig0033735:14935-14954 | Msa1452220:intron | 45.0% | |
AGTTGAGGGAGGAATTGAAC+GGG | + | tig0033735:14936-14955 | Msa1452220:intron | 45.0% | |
! | AGGCAAGCCTTAGAAGCATA+TGG | + | tig0033735:14974-14993 | Msa1452220:intron | 45.0% |
GCGGAAACCATATGCTTCTA+AGG | - | tig0033735:14984-15003 | None:intergenic | 45.0% | |
TCGTCTTGCTTCTACTCAAG+CGG | - | tig0033735:15003-15022 | None:intergenic | 45.0% | |
TGGAATGTAACTTCAGCGGA+AGG | + | tig0033735:15029-15048 | Msa1452220:intron | 45.0% | |
AAGGAGAAGTAGGTCTACCT+CGG | + | tig0033735:15048-15067 | Msa1452220:intron | 45.0% | |
ACCACCCAGCTTGAATATGA+TGG | - | tig0033735:15171-15190 | None:intergenic | 45.0% | |
TTCAAGCTGGGTGGTTGAAA+TGG | + | tig0033735:15176-15195 | Msa1452220:intron | 45.0% | |
TTGAAATGGAGAAGAGCCTC+AGG | + | tig0033735:15190-15209 | Msa1452220:intron | 45.0% | |
TGAAATGGAGAAGAGCCTCA+GGG | + | tig0033735:15191-15210 | Msa1452220:intron | 45.0% | |
CTATCGGACAACAATCAGAC+CGG | + | tig0033735:15258-15277 | Msa1452220:intron | 45.0% | |
TGTTGTATGGTACGGAGTGT+TGG | + | tig0033735:15284-15303 | Msa1452220:intron | 45.0% | |
! | GTTGTATGGTACGGAGTGTT+GGG | + | tig0033735:15285-15304 | Msa1452220:intron | 45.0% |
GTGGTAAGACTCGACATGAT+AGG | + | tig0033735:15371-15390 | Msa1452220:intron | 45.0% | |
TCTTCTTACCACGGCATCTA+CGG | - | tig0033735:15497-15516 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0033735:15675-15694 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0033735:15676-15695 | None:intergenic | 45.0% |
TCAAACTTGGGCTCCATTGT+AGG | - | tig0033735:15827-15846 | None:intergenic | 45.0% | |
!! | AACGAAAGTACCCTCACTTG+AGG | + | tig0033735:16241-16260 | Msa1452220:CDS | 45.0% |
! | AACGACCCGTCTAAGGTAAA+TGG | + | tig0033735:16315-16334 | Msa1452220:intron | 45.0% |
! | ACGACCCGTCTAAGGTAAAT+GGG | + | tig0033735:16316-16335 | Msa1452220:intron | 45.0% |
GTGACCCATTTACCTTAGAC+GGG | - | tig0033735:16323-16342 | None:intergenic | 45.0% | |
GGTGACCCATTTACCTTAGA+CGG | - | tig0033735:16324-16343 | None:intergenic | 45.0% | |
TTTCTCTTAAGCAGCAAGGC+TGG | + | tig0033735:16451-16470 | Msa1452220:CDS | 45.0% | |
AGTTAGAGAGAGAGAGAGAG+AGG | - | tig0033735:16602-16621 | None:intergenic | 45.0% | |
GGCCTGTTAATGGTTAGGAA+TGG | - | tig0033735:16641-16660 | None:intergenic | 45.0% | |
AGCGTCAGATGGCAAAAGAA+GGG | + | tig0033735:16865-16884 | Msa1452220:CDS | 45.0% | |
GCTGCAAAAGGTCATTCAGA+GGG | + | tig0033735:16887-16906 | Msa1452220:CDS | 45.0% | |
! | GGCAGCATTAACTTGAACAC+AGG | - | tig0033735:16950-16969 | None:intergenic | 45.0% |
AACCAGCGAAACAACGACAA+TGG | + | tig0033735:17296-17315 | Msa1452220:intron | 45.0% | |
ACAGAGAAGCAAAAGCTCTC+TGG | - | tig0033735:17391-17410 | None:intergenic | 45.0% | |
AGTCACACTCTCTAGATGAC+TGG | + | tig0033735:17521-17540 | Msa1452220:intron | 45.0% | |
! | CACCTCGCCTTAACATTTTG+GGG | - | tig0033735:17680-17699 | None:intergenic | 45.0% |
! | GCACCTCGCCTTAACATTTT+GGG | - | tig0033735:17681-17700 | None:intergenic | 45.0% |
! | ACACACAGCTCTCGATTTTG+GGG | - | tig0033735:17719-17738 | None:intergenic | 45.0% |
! | CACACACAGCTCTCGATTTT+GGG | - | tig0033735:17720-17739 | None:intergenic | 45.0% |
! | TCACACACAGCTCTCGATTT+TGG | - | tig0033735:17721-17740 | None:intergenic | 45.0% |
ATGTAACCAGGGACATCAGA+CGG | - | tig0033735:17791-17810 | None:intergenic | 45.0% | |
! | GAACCAAGAAGCATGTAACC+AGG | - | tig0033735:17803-17822 | None:intergenic | 45.0% |
GGTTACATGCTTCTTGGTTC+CGG | + | tig0033735:17803-17822 | Msa1452220:intron | 45.0% | |
!!! | GATTTTTTCCGCCCAGAGAT+TGG | - | tig0033735:17829-17848 | None:intergenic | 45.0% |
ATCTCTGGGCGGAAAAAATC+TGG | + | tig0033735:17829-17848 | Msa1452220:intron | 45.0% | |
TCTCTGGGCGGAAAAAATCT+GGG | + | tig0033735:17830-17849 | Msa1452220:intron | 45.0% | |
CGGAAAAAATCTGGGTAAGG+TGG | + | tig0033735:17838-17857 | Msa1452220:intron | 45.0% | |
!! | GAATGGGAACTTGTTGCTGT+GGG | + | tig0033735:17921-17940 | Msa1452220:intron | 45.0% |
GACGACCTACAGGAAACAAA+TGG | + | tig0033735:17945-17964 | Msa1452220:intron | 45.0% | |
AGTGCCCATTTGTTTCCTGT+AGG | - | tig0033735:17953-17972 | None:intergenic | 45.0% | |
AAATGGGCACTAAAGCCCAA+AGG | + | tig0033735:17962-17981 | Msa1452220:intron | 45.0% | |
AATGGGCACTAAAGCCCAAA+GGG | + | tig0033735:17963-17982 | Msa1452220:intron | 45.0% | |
! | TCATGAGCTCCTGATTTTGG+GGG | - | tig0033735:18029-18048 | None:intergenic | 45.0% |
GCCAATACTAATACATGGGC+TGG | + | tig0033735:18128-18147 | Msa1452220:intron | 45.0% | |
GATCGTCTGGTAGGGTTAAA+AGG | + | tig0033735:18439-18458 | Msa1452220:intron | 45.0% | |
CATTAGACTGAGAGAGTGAG+AGG | - | tig0033735:18495-18514 | None:intergenic | 45.0% | |
! | CTTGCAGCCCATCATTGTTT+TGG | - | tig0033735:18577-18596 | None:intergenic | 45.0% |
GATGAAACCGCTGATATAGG+TGG | + | tig0033735:18641-18660 | Msa1452220:CDS | 45.0% | |
TAGACAGGAAAGCTAGTAGG+TGG | - | tig0033735:18800-18819 | None:intergenic | 45.0% | |
GTACCAGCTTTCCATCAACT+TGG | - | tig0033735:19207-19226 | None:intergenic | 45.0% | |
!! | AGTTGATGGAAAGCTGGTAC+CGG | + | tig0033735:19207-19226 | Msa1452220:CDS | 45.0% |
TTGGGACTTATGGAGTCAAC+CGG | - | tig0033735:19229-19248 | None:intergenic | 45.0% | |
ATTGCGTAAAGCAAAAGGGG+TGG | - | tig0033735:19302-19321 | None:intergenic | 45.0% | |
CGAAGATGAGCATGACACAT+TGG | - | tig0033735:19359-19378 | None:intergenic | 45.0% | |
CATGCTCATCTTCGATTGCT+TGG | + | tig0033735:19365-19384 | Msa1452220:CDS | 45.0% | |
TTCGATTGCTTGGACGAAGA+AGG | + | tig0033735:19375-19394 | Msa1452220:CDS | 45.0% | |
!! | TACCCTGCTGATTCCAATGA+TGG | + | tig0033735:19496-19515 | Msa1452220:CDS | 45.0% |
TACAAGAGAGTGGCCATCAT+TGG | - | tig0033735:19512-19531 | None:intergenic | 45.0% | |
!!! | TATTTTATTTTAAATGTATA+TGG | + | tig0033735:11246-11265 | Msa1452220:intron | 5.0% |
!! | TTCTATAAATAATTAAAAAA+GGG | - | tig0033735:19058-19077 | None:intergenic | 5.0% |
!! | TTTCTATAAATAATTAAAAA+AGG | - | tig0033735:19059-19078 | None:intergenic | 5.0% |
GTAGGCTTTCTGCTCGCAAA+AGG | + | tig0033735:9964-9983 | Msa1452220:CDS | 50.0% | |
CTCGCAAAAGGTTTGTCCCA+TGG | + | tig0033735:9976-9995 | Msa1452220:CDS | 50.0% | |
CGCAAAAGGTTTGTCCCATG+GGG | + | tig0033735:9978-9997 | Msa1452220:CDS | 50.0% | |
TAGGAGTGGTAGAACCCCAT+GGG | - | tig0033735:9995-10014 | None:intergenic | 50.0% | |
ATAGGAGTGGTAGAACCCCA+TGG | - | tig0033735:9996-10015 | None:intergenic | 50.0% | |
GCGGAGGTGGGAATAGAAAT+AGG | - | tig0033735:10014-10033 | None:intergenic | 50.0% | |
! | CAACTCAGTCAAAGGTGTGG+CGG | - | tig0033735:10033-10052 | None:intergenic | 50.0% |
CACAGCCTCCTCTTTGTGAT+CGG | - | tig0033735:10069-10088 | None:intergenic | 50.0% | |
GTTTCCTTCGTCCACATCAG+AGG | + | tig0033735:10195-10214 | Msa1452220:intron | 50.0% | |
AGTACCTCTGATGTGGACGA+AGG | - | tig0033735:10202-10221 | None:intergenic | 50.0% | |
TGCTATGTAGTTGCAGAGGC+AGG | + | tig0033735:10328-10347 | Msa1452220:intron | 50.0% | |
AACTGTGCAGCGAGGATCAA+AGG | - | tig0033735:10596-10615 | None:intergenic | 50.0% | |
TTGATCCTCGCTGCACAGTT+TGG | + | tig0033735:10596-10615 | Msa1452220:intron | 50.0% | |
TGATCCTCGCTGCACAGTTT+GGG | + | tig0033735:10597-10616 | Msa1452220:intron | 50.0% | |
AGGTTTCGATGGGAAGCCTA+TGG | + | tig0033735:10665-10684 | Msa1452220:CDS | 50.0% | |
ACTGGTAGGAGTGACGATGA+TGG | - | tig0033735:10700-10719 | None:intergenic | 50.0% | |
AAGTCCCCAAGGCAAATTCC+AGG | + | tig0033735:10833-10852 | Msa1452220:CDS | 50.0% | |
GTCACAGATGAGGAGATCAC+AGG | - | tig0033735:10993-11012 | None:intergenic | 50.0% | |
TGATCTCCTCATCTGTGACG+AGG | + | tig0033735:10994-11013 | Msa1452220:CDS | 50.0% | |
CCTGTAAAGAGGAAGGAGAG+AGG | - | tig0033735:11072-11091 | None:intergenic | 50.0% | |
CCTCTCTCCTTCCTCTTTAC+AGG | + | tig0033735:11069-11088 | Msa1452220:intron | 50.0% | |
GGATAGATCCTCACCTGCAA+AGG | - | tig0033735:11181-11200 | None:intergenic | 50.0% | |
!! | GTGCCACTTGCAGAATGACT+TGG | + | tig0033735:11272-11291 | Msa1452220:intron | 50.0% |
TTCTCTTCTGCAGTAGCAGC+AGG | - | tig0033735:11679-11698 | None:intergenic | 50.0% | |
CCAGCAGGGTTACAACATCA+AGG | - | tig0033735:11833-11852 | None:intergenic | 50.0% | |
CCTTGATGTTGTAACCCTGC+TGG | + | tig0033735:11830-11849 | Msa1452220:intron | 50.0% | |
ACCCTGCTGGTAAACTGGAA+AGG | + | tig0033735:11843-11862 | Msa1452220:intron | 50.0% | |
CCCTTTCCAGTTTACCAGCA+GGG | - | tig0033735:11847-11866 | None:intergenic | 50.0% | |
CCCTGCTGGTAAACTGGAAA+GGG | + | tig0033735:11844-11863 | Msa1452220:intron | 50.0% | |
ACCCTTTCCAGTTTACCAGC+AGG | - | tig0033735:11848-11867 | None:intergenic | 50.0% | |
TCTTGAGGGATTGGACAGCT+TGG | - | tig0033735:12283-12302 | None:intergenic | 50.0% | |
GGCTGAAACCTACCTTCTCA+TGG | - | tig0033735:12533-12552 | None:intergenic | 50.0% | |
TGTTACAAGCCACCCTTTGG+TGG | - | tig0033735:12736-12755 | None:intergenic | 50.0% | |
GCCACGGTTACGAGATTAAG+AGG | - | tig0033735:12898-12917 | None:intergenic | 50.0% | |
!! | CCCAGGAACTTCAGGTTTTG+AGG | + | tig0033735:13543-13562 | Msa1452220:CDS | 50.0% |
TGTAGGTCTGGATCATGGAC+AGG | + | tig0033735:13683-13702 | Msa1452220:intron | 50.0% | |
GTGCTGTATCCATATCAGGC+TGG | + | tig0033735:13897-13916 | Msa1452220:intron | 50.0% | |
AGTTAGCACTCTGACTGCTG+TGG | - | tig0033735:14318-14337 | None:intergenic | 50.0% | |
! | GGGTTCCGAGAGAGATTTTG+TGG | + | tig0033735:14663-14682 | Msa1452220:intron | 50.0% |
TGGAAAGCCCTGGAGAAGAA+AGG | + | tig0033735:14683-14702 | Msa1452220:intron | 50.0% | |
GGAAAGCCCTGGAGAAGAAA+GGG | + | tig0033735:14684-14703 | Msa1452220:intron | 50.0% | |
GAAAGCCCTGGAGAAGAAAG+GGG | + | tig0033735:14685-14704 | Msa1452220:intron | 50.0% | |
CCTAACCCCTTTCTTCTCCA+GGG | - | tig0033735:14693-14712 | None:intergenic | 50.0% | |
TCCTAACCCCTTTCTTCTCC+AGG | - | tig0033735:14694-14713 | None:intergenic | 50.0% | |
AAGGACTTAGGGTTGACCCT+TGG | - | tig0033735:14820-14839 | None:intergenic | 50.0% | |
ACTTCAGCGGAAGGAGAAGT+AGG | + | tig0033735:15038-15057 | Msa1452220:intron | 50.0% | |
TCTACCTCGGAGGTGAAAGT+TGG | + | tig0033735:15061-15080 | Msa1452220:intron | 50.0% | |
ATCTCCAACTTTCACCTCCG+AGG | - | tig0033735:15068-15087 | None:intergenic | 50.0% | |
GCCATCATATTCAAGCTGGG+TGG | + | tig0033735:15167-15186 | Msa1452220:intron | 50.0% | |
GAAATGGAGAAGAGCCTCAG+GGG | + | tig0033735:15192-15211 | Msa1452220:intron | 50.0% | |
CTTATCGCACAAAACCCCTG+AGG | - | tig0033735:15209-15228 | None:intergenic | 50.0% | |
ATCAGACCGGCGATGTTGTA+TGG | + | tig0033735:15271-15290 | Msa1452220:intron | 50.0% | |
ACCGGCGATGTTGTATGGTA+CGG | + | tig0033735:15276-15295 | Msa1452220:intron | 50.0% | |
TCCGTACCATACAACATCGC+CGG | - | tig0033735:15280-15299 | None:intergenic | 50.0% | |
TAGAGATGAGGATGTTGCGC+TGG | + | tig0033735:15344-15363 | Msa1452220:intron | 50.0% | |
TGACACCATTAGGGAGAGAG+TGG | + | tig0033735:15402-15421 | Msa1452220:intron | 50.0% | |
GACACCATTAGGGAGAGAGT+GGG | + | tig0033735:15403-15422 | Msa1452220:intron | 50.0% | |
ACACCATTAGGGAGAGAGTG+GGG | + | tig0033735:15404-15423 | Msa1452220:intron | 50.0% | |
CTTCTTACCACGGCATCTAC+GGG | - | tig0033735:15496-15515 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | tig0033735:15671-15690 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0033735:15677-15696 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | tig0033735:15674-15693 | Msa1452220:intron | 50.0% | |
!! | AGTGAGGGTACTTTCGTTCC+CGG | - | tig0033735:16239-16258 | None:intergenic | 50.0% |
TACCCTCACTTGAGGCTTGA+TGG | + | tig0033735:16249-16268 | Msa1452220:CDS | 50.0% | |
ATCCCTCCAAACTCTTGCTG+CGG | - | tig0033735:16662-16681 | None:intergenic | 50.0% | |
! | CTTCTTTTGCCATCTGACGC+TGG | - | tig0033735:16866-16885 | None:intergenic | 50.0% |
CAGCGTCAGATGGCAAAAGA+AGG | + | tig0033735:16864-16883 | Msa1452220:CDS | 50.0% | |
GGCAAAAGAAGGGCTGCAAA+AGG | + | tig0033735:16875-16894 | Msa1452220:CDS | 50.0% | |
GGCTGCAAAAGGTCATTCAG+AGG | + | tig0033735:16886-16905 | Msa1452220:CDS | 50.0% | |
GGGTAACTTTCTCTCGACAG+AGG | + | tig0033735:17021-17040 | Msa1452220:intron | 50.0% | |
! | TGTCGTTGTTTCGCTGGTTG+TGG | - | tig0033735:17295-17314 | None:intergenic | 50.0% |
! | CTCCATTGTCGTTGTTTCGC+TGG | - | tig0033735:17301-17320 | None:intergenic | 50.0% |
AGAGTGTGACTGACACGTGT+CGG | - | tig0033735:17512-17531 | None:intergenic | 50.0% | |
GACCCCAAAATGTTAAGGCG+AGG | + | tig0033735:17675-17694 | Msa1452220:intron | 50.0% | |
! | GGCACCTCGCCTTAACATTT+TGG | - | tig0033735:17682-17701 | None:intergenic | 50.0% |
TGTAACCAGGGACATCAGAC+GGG | - | tig0033735:17790-17809 | None:intergenic | 50.0% | |
GTCCCTGGTTACATGCTTCT+TGG | + | tig0033735:17797-17816 | Msa1452220:intron | 50.0% | |
GGGCGGAAAAAATCTGGGTA+AGG | + | tig0033735:17835-17854 | Msa1452220:intron | 50.0% | |
!! | CGAATGGGAACTTGTTGCTG+TGG | + | tig0033735:17920-17939 | Msa1452220:intron | 50.0% |
! | ACGCGGCTAGGGTTTTTACT+CGG | + | tig0033735:17995-18014 | Msa1452220:intron | 50.0% |
GAAGCAAGACCCCCAAAATC+AGG | + | tig0033735:18017-18036 | Msa1452220:intron | 50.0% | |
!! | GGTGGATTTGCTGAGATTGC+AGG | + | tig0033735:18659-18678 | Msa1452220:CDS | 50.0% |
CTGAGATTGCAGGCTGCTTA+GGG | + | tig0033735:18669-18688 | Msa1452220:CDS | 50.0% | |
TTCCCAACCTCTGTACCAGA+CGG | + | tig0033735:18960-18979 | Msa1452220:CDS | 50.0% | |
! | TGGATTTTCGCTCGACGTTG+CGG | - | tig0033735:19282-19301 | None:intergenic | 50.0% |
GGCCATCATTGGAATCAGCA+GGG | - | tig0033735:19501-19520 | None:intergenic | 50.0% | |
TGGCCATCATTGGAATCAGC+AGG | - | tig0033735:19502-19521 | None:intergenic | 50.0% | |
AATAGCGGCAGCTCCATTGG+TGG | - | tig0033735:9880-9899 | None:intergenic | 55.0% | |
GCAAATAGCGGCAGCTCCAT+TGG | - | tig0033735:9883-9902 | None:intergenic | 55.0% | |
CGCCACACCTTTGACTGAGT+TGG | + | tig0033735:10031-10050 | Msa1452220:CDS | 55.0% | |
AGGATCAATTCCAGGGGGCA+GGG | - | tig0033735:10105-10124 | None:intergenic | 55.0% | |
GATCCTCGCTGCACAGTTTG+GGG | + | tig0033735:10598-10617 | Msa1452220:intron | 55.0% | |
TGTGAGCCTCGTCACAGATG+AGG | - | tig0033735:11003-11022 | None:intergenic | 55.0% | |
GAGCAGCCAATGCCTAATCC+AGG | - | tig0033735:11123-11142 | None:intergenic | 55.0% | |
GCTGTCAGGAACTCCTTTGC+AGG | + | tig0033735:11165-11184 | Msa1452220:CDS | 55.0% | |
CAGGAACTCCTTTGCAGGTG+AGG | + | tig0033735:11170-11189 | Msa1452220:intron | 55.0% | |
GCAATGCCGCCCAATATTCC+AGG | - | tig0033735:11330-11349 | None:intergenic | 55.0% | |
GCCCGTTTAACCTGCGTTTG+AGG | - | tig0033735:13102-13121 | None:intergenic | 55.0% | |
AGGTCTGGATCATGGACAGG+AGG | + | tig0033735:13686-13705 | Msa1452220:intron | 55.0% | |
GGTCTGGATCATGGACAGGA+GGG | + | tig0033735:13687-13706 | Msa1452220:intron | 55.0% | |
GTCTGGATCATGGACAGGAG+GGG | + | tig0033735:13688-13707 | Msa1452220:CDS | 55.0% | |
CCCTGGAGAAGAAAGGGGTT+AGG | + | tig0033735:14690-14709 | Msa1452220:intron | 55.0% | |
! | CTTGCTTGGTGAGTTGAGGG+AGG | + | tig0033735:14925-14944 | Msa1452220:intron | 55.0% |
TGAGGGAGGAATTGAACGGG+AGG | + | tig0033735:14939-14958 | Msa1452220:intron | 55.0% | |
!! | TGCTTCTAAGGCTTGCCTCC+AGG | - | tig0033735:14972-14991 | None:intergenic | 55.0% |
GAGAAGTAGGTCTACCTCGG+AGG | + | tig0033735:15051-15070 | Msa1452220:intron | 55.0% | |
!! | GTATGGTACGGAGTGTTGGG+CGG | + | tig0033735:15288-15307 | Msa1452220:intron | 55.0% |
AGGATGTTGCGCTGGATGAG+TGG | + | tig0033735:15352-15371 | Msa1452220:intron | 55.0% | |
CACCATTAGGGAGAGAGTGG+GGG | + | tig0033735:15405-15424 | Msa1452220:intron | 55.0% | |
TACCCCCACTCTCTCCCTAA+TGG | - | tig0033735:15410-15429 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | tig0033735:15663-15682 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | tig0033735:15662-15681 | Msa1452220:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | tig0033735:15663-15682 | Msa1452220:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | tig0033735:15669-15688 | Msa1452220:intron | 55.0% | |
CGCCATCAAGCCTCAAGTGA+GGG | - | tig0033735:16254-16273 | None:intergenic | 55.0% | |
CTGCTTGAACGACCCGTCTA+AGG | + | tig0033735:16308-16327 | Msa1452220:CDS | 55.0% | |
CTCTTAAGCAGCAAGGCTGG+TGG | + | tig0033735:16454-16473 | Msa1452220:CDS | 55.0% | |
GCTGCGGCCTGTTAATGGTT+AGG | - | tig0033735:16646-16665 | None:intergenic | 55.0% | |
CTCTTGCTGCGGCCTGTTAA+TGG | - | tig0033735:16651-16670 | None:intergenic | 55.0% | |
AACAGGCCGCAGCAAGAGTT+TGG | + | tig0033735:16653-16672 | Msa1452220:intron | 55.0% | |
GCAGCAAGAGTTTGGAGGGA+TGG | + | tig0033735:16661-16680 | Msa1452220:CDS | 55.0% | |
GTAGGTCTACCAGCGTCAGA+TGG | + | tig0033735:16854-16873 | Msa1452220:intron | 55.0% | |
! | CGTTGTTTCGCTGGTTGTGG+TGG | - | tig0033735:17292-17311 | None:intergenic | 55.0% |
! | GACACGTGTCGGTCACTTAG+AGG | - | tig0033735:17501-17520 | None:intergenic | 55.0% |
GAAACCGACTGCTGCTGTAG+TGG | + | tig0033735:17754-17773 | Msa1452220:intron | 55.0% | |
! | TGTGCCACTACAGCAGCAGT+CGG | - | tig0033735:17761-17780 | None:intergenic | 55.0% |
TGCTGCTGTAGTGGCACATG+TGG | + | tig0033735:17763-17782 | Msa1452220:intron | 55.0% | |
GCTGCTGTAGTGGCACATGT+GGG | + | tig0033735:17764-17783 | Msa1452220:intron | 55.0% | |
TCTTGGTTCCGGCCAATCTC+TGG | + | tig0033735:17814-17833 | Msa1452220:intron | 55.0% | |
CTTGGTTCCGGCCAATCTCT+GGG | + | tig0033735:17815-17834 | Msa1452220:intron | 55.0% | |
! | TTTTCCGCCCAGAGATTGGC+CGG | - | tig0033735:17825-17844 | None:intergenic | 55.0% |
GACTGACGGCAAGCGAACAT+TGG | + | tig0033735:17877-17896 | Msa1452220:intron | 55.0% | |
CGCGTTCTTTGCAGCCCTTT+GGG | - | tig0033735:17980-17999 | None:intergenic | 55.0% | |
CCAAAGGGCTGCAAAGAACG+CGG | + | tig0033735:17978-17997 | Msa1452220:intron | 55.0% | |
GCTGAGATTGCAGGCTGCTT+AGG | + | tig0033735:18668-18687 | Msa1452220:CDS | 55.0% | |
CACCGTCTGGTACAGAGGTT+GGG | - | tig0033735:18965-18984 | None:intergenic | 55.0% | |
ACACCGTCTGGTACAGAGGT+TGG | - | tig0033735:18966-18985 | None:intergenic | 55.0% | |
AAGGACACCGTCTGGTACAG+AGG | - | tig0033735:18970-18989 | None:intergenic | 55.0% | |
TGTACCAGACGGTGTCCTTC+AGG | + | tig0033735:18971-18990 | Msa1452220:CDS | 55.0% | |
CATCACCAGCTGAAGCCTGA+AGG | - | tig0033735:18989-19008 | None:intergenic | 55.0% | |
! | TCAGGCTTCAGCTGGTGATG+AGG | + | tig0033735:18989-19008 | Msa1452220:CDS | 55.0% |
! | GTCAAAGGTGTGGCGGAGGT+GGG | - | tig0033735:10026-10045 | None:intergenic | 60.0% |
! | AGTCAAAGGTGTGGCGGAGG+TGG | - | tig0033735:10027-10046 | None:intergenic | 60.0% |
! | CTCAGTCAAAGGTGTGGCGG+AGG | - | tig0033735:10030-10049 | None:intergenic | 60.0% |
GGATCAATTCCAGGGGGCAG+GGG | - | tig0033735:10104-10123 | None:intergenic | 60.0% | |
GAGGATCAATTCCAGGGGGC+AGG | - | tig0033735:10106-10125 | None:intergenic | 60.0% | |
GTTGCAGAGGCAGGCACACT+TGG | + | tig0033735:10337-10356 | Msa1452220:intron | 60.0% | |
GATCAAAGGCAGGCAGCCCT+AGG | - | tig0033735:10582-10601 | None:intergenic | 60.0% | |
GTGCAGCGAGGATCAAAGGC+AGG | - | tig0033735:10592-10611 | None:intergenic | 60.0% | |
CTTCCCCAAACTGTGCAGCG+AGG | - | tig0033735:10604-10623 | None:intergenic | 60.0% | |
ACCATACGAAGTGGGAGCCC+AGG | + | tig0033735:13526-13545 | Msa1452220:CDS | 60.0% | |
TCCTGGGCTCCCACTTCGTA+TGG | - | tig0033735:13530-13549 | None:intergenic | 60.0% | |
AGTGGGAGCCCAGGAACTTC+AGG | + | tig0033735:13535-13554 | Msa1452220:CDS | 60.0% | |
GGATCATGGACAGGAGGGGA+TGG | + | tig0033735:13692-13711 | Msa1452220:CDS | 60.0% | |
TCATGGACAGGAGGGGATGG+AGG | + | tig0033735:13695-13714 | Msa1452220:CDS | 60.0% | |
! | GGAGGCTGGGTTGAGCTTTC+CGG | + | tig0033735:13713-13732 | Msa1452220:CDS | 60.0% |
!!! | GGGTAGTTTTGGGTGGGGTC+AGG | - | tig0033735:14251-14270 | None:intergenic | 60.0% |
CTGCTGTGGCAGAGGATGGA+AGG | - | tig0033735:14304-14323 | None:intergenic | 60.0% | |
CTGACTGCTGTGGCAGAGGA+TGG | - | tig0033735:14308-14327 | None:intergenic | 60.0% | |
CACTCTGACTGCTGTGGCAG+AGG | - | tig0033735:14312-14331 | None:intergenic | 60.0% | |
AGGGAGCTTCGACCAGTGTG+AGG | + | tig0033735:14747-14766 | Msa1452220:intron | 60.0% | |
TTCGACCAGTGTGAGGACGC+AGG | + | tig0033735:14754-14773 | Msa1452220:intron | 60.0% | |
ACCAGTGTGAGGACGCAGGA+TGG | + | tig0033735:14758-14777 | Msa1452220:intron | 60.0% | |
CCAGTGTGAGGACGCAGGAT+GGG | + | tig0033735:14759-14778 | Msa1452220:intron | 60.0% | |
CAGTGTGAGGACGCAGGATG+GGG | + | tig0033735:14760-14779 | Msa1452220:intron | 60.0% | |
TGAACGGGAGGCTAGAGACC+TGG | + | tig0033735:14951-14970 | Msa1452220:intron | 60.0% | |
GAGAAGACCCGTAGATGCCG+TGG | + | tig0033735:15486-15505 | Msa1452220:intron | 60.0% | |
GCGCCATCAAGCCTCAAGTG+AGG | - | tig0033735:16255-16274 | None:intergenic | 60.0% | |
AGCAGCAAGGCTGGTGGTTG+TGG | + | tig0033735:16460-16479 | Msa1452220:CDS | 60.0% | |
AGGCCGCAGCAAGAGTTTGG+AGG | + | tig0033735:16656-16675 | Msa1452220:intron | 60.0% | |
GGCCGCAGCAAGAGTTTGGA+GGG | + | tig0033735:16657-16676 | Msa1452220:intron | 60.0% | |
GGAGCAAAACGACAGCGTCG+CGG | + | tig0033735:16908-16927 | Msa1452220:CDS | 60.0% | |
TAAGGTGGTCGGTGCGAAGG+CGG | + | tig0033735:17853-17872 | Msa1452220:intron | 60.0% | |
TGCTGTGGGAGACGACCTAC+AGG | + | tig0033735:17935-17954 | Msa1452220:intron | 60.0% | |
CCGCGTTCTTTGCAGCCCTT+TGG | - | tig0033735:17981-18000 | None:intergenic | 60.0% | |
GGCTGCAAAGAACGCGGCTA+GGG | + | tig0033735:17984-18003 | Msa1452220:intron | 60.0% | |
GAAGCCTGAAGGACACCGTC+TGG | - | tig0033735:18978-18997 | None:intergenic | 60.0% | |
GGTGTCCTTCAGGCTTCAGC+TGG | + | tig0033735:18981-19000 | Msa1452220:CDS | 60.0% | |
TTTCGCTCGACGTTGCGGCT+TGG | - | tig0033735:19277-19296 | None:intergenic | 60.0% | |
TCAATTCCAGGGGGCAGGGG+CGG | - | tig0033735:10101-10120 | None:intergenic | 65.0% | |
GACAGGAGGGGATGGAGGCT+GGG | + | tig0033735:13700-13719 | Msa1452220:CDS | 65.0% | |
CCCATCCTGCGTCCTCACAC+TGG | - | tig0033735:14762-14781 | None:intergenic | 65.0% | |
ACGGGAGGCTAGAGACCTGG+AGG | + | tig0033735:14954-14973 | Msa1452220:intron | 65.0% | |
AAACGACAGCGTCGCGGCAC+AGG | + | tig0033735:16914-16933 | Msa1452220:CDS | 65.0% | |
GGTTCCGGCCAATCTCTGGG+CGG | + | tig0033735:17818-17837 | Msa1452220:intron | 65.0% | |
GGGTAAGGTGGTCGGTGCGA+AGG | + | tig0033735:17850-17869 | Msa1452220:intron | 65.0% | |
GGGCTGCAAAGAACGCGGCT+AGG | + | tig0033735:17983-18002 | Msa1452220:intron | 65.0% | |
GGACAGGAGGGGATGGAGGC+TGG | + | tig0033735:13699-13718 | Msa1452220:CDS | 70.0% | |
GTGGGCCCGTCTGATGTCCC+TGG | + | tig0033735:17782-17801 | Msa1452220:intron | 70.0% | |
GGTGCGAAGGCGGCGACTGA+CGG | + | tig0033735:17863-17882 | Msa1452220:intron | 70.0% | |
! | CCAGGGGGCAGGGGCGGCGA+GGG | - | tig0033735:10095-10114 | None:intergenic | 85.0% |
! | TCCAGGGGGCAGGGGCGGCG+AGG | - | tig0033735:10096-10115 | None:intergenic | 85.0% |
! | CCCTCGCCGCCCCTGCCCCC+TGG | + | tig0033735:10092-10111 | Msa1452220:CDS | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0033735 | gene | 9681 | 19671 | 9681 | ID=Msa1452220;Name=Msa1452220 |
tig0033735 | mRNA | 9681 | 19671 | 9681 | ID=Msa1452220-mRNA-1;Parent=Msa1452220;Name=Msa1452220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.89|0.9|1|0.78|0.9|20|80|929 |
tig0033735 | exon | 9681 | 10194 | 9681 | ID=Msa1452220-mRNA-1:exon:18465;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 10429 | 10519 | 10429 | ID=Msa1452220-mRNA-1:exon:18466;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 10614 | 10854 | 10614 | ID=Msa1452220-mRNA-1:exon:18467;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 10929 | 11054 | 10929 | ID=Msa1452220-mRNA-1:exon:18468;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 11130 | 11186 | 11130 | ID=Msa1452220-mRNA-1:exon:18469;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 11285 | 11371 | 11285 | ID=Msa1452220-mRNA-1:exon:18470;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 11652 | 11747 | 11652 | ID=Msa1452220-mRNA-1:exon:18471;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 11952 | 12002 | 11952 | ID=Msa1452220-mRNA-1:exon:18472;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 12938 | 13012 | 12938 | ID=Msa1452220-mRNA-1:exon:18473;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 13111 | 13197 | 13111 | ID=Msa1452220-mRNA-1:exon:18474;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 13514 | 13605 | 13514 | ID=Msa1452220-mRNA-1:exon:18475;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 13688 | 13820 | 13688 | ID=Msa1452220-mRNA-1:exon:18476;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 16210 | 16329 | 16210 | ID=Msa1452220-mRNA-1:exon:18477;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 16439 | 16552 | 16439 | ID=Msa1452220-mRNA-1:exon:18478;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 16658 | 16741 | 16658 | ID=Msa1452220-mRNA-1:exon:18479;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 16858 | 16935 | 16858 | ID=Msa1452220-mRNA-1:exon:18480;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 17022 | 17080 | 17022 | ID=Msa1452220-mRNA-1:exon:18481;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 18538 | 18715 | 18538 | ID=Msa1452220-mRNA-1:exon:18482;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 18912 | 19010 | 18912 | ID=Msa1452220-mRNA-1:exon:18483;Parent=Msa1452220-mRNA-1 |
tig0033735 | exon | 19184 | 19671 | 19184 | ID=Msa1452220-mRNA-1:exon:18484;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 9681 | 10194 | 9681 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 10429 | 10519 | 10429 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 10614 | 10854 | 10614 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 10929 | 11054 | 10929 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 11130 | 11186 | 11130 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 11285 | 11371 | 11285 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 11652 | 11747 | 11652 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 11952 | 12002 | 11952 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 12938 | 13012 | 12938 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 13111 | 13197 | 13111 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 13514 | 13605 | 13514 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 13688 | 13820 | 13688 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 16210 | 16329 | 16210 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 16439 | 16552 | 16439 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 16658 | 16741 | 16658 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 16858 | 16935 | 16858 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 17022 | 17080 | 17022 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 18538 | 18715 | 18538 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 18912 | 19010 | 18912 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | CDS | 19184 | 19591 | 19184 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
tig0033735 | three_prime_UTR | 19592 | 19671 | 19592 | ID=Msa1452220-mRNA-1:three_prime_utr;Parent=Msa1452220-mRNA-1 |
Gene Sequence |
Protein sequence |