Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452220 | sp|Q0PCS3|CHR25_ARATH | 68.281 | 826 | 234 | 10 | 21 | 833 | 38 | 848 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452220 | A0A072UN86 | 93.129 | 946 | 47 | 5 | 1 | 929 | 1 | 945 | 0.0 | 1779 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1452220 | TR | SNF2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1360080 | Msa1452220 | 0.830888 | 2.278963e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452220 | MtrunA17_Chr5g0393461 | 93.129 | 946 | 47 | 5 | 1 | 929 | 1 | 945 | 0.0 | 1779 |
| Msa1452220 | MtrunA17_Chr4g0040301 | 30.280 | 535 | 305 | 12 | 190 | 670 | 6 | 526 | 6.63e-64 | 229 |
| Msa1452220 | MtrunA17_Chr5g0394201 | 33.753 | 477 | 265 | 12 | 202 | 672 | 391 | 822 | 7.32e-64 | 234 |
| Msa1452220 | MtrunA17_Chr1g0205891 | 32.704 | 477 | 271 | 12 | 202 | 672 | 404 | 836 | 2.39e-63 | 233 |
| Msa1452220 | MtrunA17_Chr1g0183681 | 28.961 | 587 | 324 | 13 | 202 | 743 | 419 | 957 | 7.68e-63 | 231 |
| Msa1452220 | MtrunA17_Chr8g0384531 | 29.811 | 530 | 311 | 14 | 202 | 700 | 412 | 911 | 5.33e-61 | 225 |
| Msa1452220 | MtrunA17_Chr5g0403921 | 30.105 | 475 | 295 | 7 | 202 | 671 | 212 | 654 | 5.94e-60 | 218 |
| Msa1452220 | MtrunA17_Chr4g0066741 | 32.427 | 478 | 259 | 15 | 202 | 671 | 216 | 637 | 6.75e-59 | 219 |
| Msa1452220 | MtrunA17_Chr4g0066651 | 32.008 | 503 | 289 | 14 | 202 | 695 | 1017 | 1475 | 9.99e-58 | 217 |
| Msa1452220 | MtrunA17_Chr5g0442141 | 30.196 | 510 | 302 | 14 | 202 | 697 | 645 | 1114 | 2.66e-57 | 215 |
| Msa1452220 | MtrunA17_Chr3g0095091 | 30.469 | 512 | 303 | 13 | 202 | 705 | 599 | 1065 | 6.59e-57 | 214 |
| Msa1452220 | MtrunA17_Chr2g0286291 | 32.292 | 480 | 257 | 15 | 202 | 671 | 219 | 640 | 1.84e-55 | 208 |
| Msa1452220 | MtrunA17_Chr3g0137091 | 27.664 | 488 | 290 | 8 | 202 | 671 | 317 | 759 | 4.14e-53 | 202 |
| Msa1452220 | MtrunA17_Chr8g0348721 | 32.112 | 464 | 250 | 14 | 202 | 644 | 1015 | 1434 | 1.77e-52 | 201 |
| Msa1452220 | MtrunA17_Chr7g0248031 | 31.887 | 461 | 256 | 12 | 202 | 644 | 1022 | 1442 | 7.00e-52 | 199 |
| Msa1452220 | MtrunA17_Chr4g0017211 | 28.276 | 580 | 350 | 15 | 202 | 748 | 1478 | 2024 | 1.03e-49 | 192 |
| Msa1452220 | MtrunA17_Chr4g0052341 | 28.958 | 480 | 278 | 14 | 202 | 667 | 773 | 1203 | 1.34e-48 | 188 |
| Msa1452220 | MtrunA17_Chr1g0163011 | 30.402 | 523 | 282 | 16 | 202 | 671 | 224 | 717 | 9.65e-48 | 182 |
| Msa1452220 | MtrunA17_Chr1g0190381 | 32.902 | 386 | 187 | 13 | 371 | 700 | 4 | 373 | 2.97e-43 | 166 |
| Msa1452220 | MtrunA17_Chr7g0232121 | 27.841 | 528 | 304 | 18 | 202 | 696 | 67 | 550 | 1.19e-40 | 161 |
| Msa1452220 | MtrunA17_Chr1g0175191 | 29.513 | 349 | 211 | 12 | 156 | 494 | 499 | 822 | 1.26e-30 | 130 |
| Msa1452220 | MtrunA17_Chr1g0175191 | 38.667 | 150 | 90 | 2 | 522 | 671 | 1062 | 1209 | 8.58e-27 | 118 |
| Msa1452220 | MtrunA17_Chr7g0233001 | 23.878 | 490 | 302 | 10 | 231 | 676 | 17 | 479 | 1.62e-29 | 124 |
| Msa1452220 | MtrunA17_Chr7g0225791 | 23.708 | 561 | 322 | 16 | 202 | 696 | 758 | 1278 | 3.72e-29 | 125 |
| Msa1452220 | MtrunA17_Chr7g0257101 | 34.061 | 229 | 140 | 5 | 521 | 749 | 1191 | 1408 | 7.81e-28 | 121 |
| Msa1452220 | MtrunA17_Chr7g0257101 | 27.304 | 293 | 178 | 7 | 202 | 477 | 606 | 880 | 2.63e-24 | 110 |
| Msa1452220 | MtrunA17_Chr7g0232971 | 24.482 | 531 | 309 | 15 | 202 | 676 | 762 | 1256 | 6.40e-27 | 118 |
| Msa1452220 | MtrunA17_Chr4g0047081 | 23.608 | 521 | 318 | 12 | 202 | 676 | 708 | 1194 | 1.82e-26 | 117 |
| Msa1452220 | MtrunA17_Chr7g0233021 | 25.660 | 530 | 303 | 17 | 202 | 676 | 697 | 1190 | 5.89e-26 | 115 |
| Msa1452220 | MtrunA17_Chr1g0191141 | 24.205 | 566 | 338 | 23 | 202 | 709 | 563 | 1095 | 4.65e-24 | 109 |
| Msa1452220 | MtrunA17_Chr1g0168031 | 35.227 | 176 | 107 | 3 | 521 | 696 | 985 | 1153 | 5.36e-23 | 105 |
| Msa1452220 | MtrunA17_Chr1g0190391 | 34.426 | 183 | 98 | 5 | 202 | 368 | 620 | 796 | 1.10e-22 | 104 |
| Msa1452220 | MtrunA17_Chr8g0352361 | 23.904 | 502 | 307 | 14 | 202 | 670 | 391 | 850 | 2.45e-22 | 103 |
| Msa1452220 | MtrunA17_Chr2g0296421 | 23.600 | 500 | 310 | 16 | 202 | 670 | 541 | 999 | 9.01e-22 | 102 |
| Msa1452220 | MtrunA17_Chr7g0231521 | 27.626 | 257 | 143 | 7 | 454 | 696 | 244 | 471 | 3.88e-21 | 99.4 |
| Msa1452220 | MtrunA17_Chr7g0231521 | 30.978 | 184 | 104 | 7 | 202 | 372 | 67 | 240 | 2.83e-14 | 77.4 |
| Msa1452220 | MtrunA17_Chr2g0320751 | 36.111 | 180 | 106 | 5 | 517 | 696 | 846 | 1016 | 7.76e-20 | 95.5 |
| Msa1452220 | MtrunA17_Chr2g0320751 | 22.464 | 276 | 156 | 7 | 231 | 477 | 480 | 726 | 3.15e-11 | 67.8 |
| Msa1452220 | MtrunA17_Chr7g0232991 | 37.143 | 105 | 66 | 0 | 567 | 671 | 509 | 613 | 5.37e-17 | 85.9 |
| Msa1452220 | MtrunA17_Chr7g0224051 | 30.000 | 180 | 113 | 4 | 539 | 709 | 934 | 1109 | 6.97e-17 | 86.3 |
| Msa1452220 | MtrunA17_Chr2g0320781 | 42.045 | 88 | 51 | 0 | 578 | 665 | 153 | 240 | 9.37e-17 | 80.9 |
| Msa1452220 | MtrunA17_Chr4g0069451 | 23.732 | 493 | 290 | 20 | 202 | 676 | 199 | 623 | 2.37e-16 | 84.0 |
| Msa1452220 | MtrunA17_Chr7g0255821 | 34.667 | 150 | 96 | 2 | 518 | 665 | 644 | 793 | 2.45e-16 | 84.0 |
| Msa1452220 | MtrunA17_Chr4g0024921 | 32.402 | 179 | 115 | 4 | 519 | 696 | 761 | 934 | 5.96e-16 | 82.8 |
| Msa1452220 | MtrunA17_Chr3g0114161 | 33.566 | 143 | 91 | 2 | 569 | 709 | 1100 | 1240 | 9.70e-16 | 82.4 |
| Msa1452220 | MtrunA17_Chr7g0233031 | 36.893 | 103 | 65 | 0 | 575 | 677 | 1102 | 1204 | 5.23e-15 | 80.1 |
| Msa1452220 | MtrunA17_Chr5g0437621 | 26.131 | 199 | 136 | 4 | 518 | 709 | 1102 | 1296 | 5.49e-15 | 80.1 |
| Msa1452220 | MtrunA17_Chr1g0212331 | 31.410 | 156 | 102 | 3 | 541 | 695 | 887 | 1038 | 1.08e-14 | 79.0 |
| Msa1452220 | MtrunA17_Chr2g0281601 | 28.846 | 156 | 108 | 2 | 540 | 695 | 1149 | 1301 | 2.39e-13 | 74.7 |
| Msa1452220 | MtrunA17_Chr5g0428401 | 32.558 | 129 | 79 | 2 | 539 | 659 | 1493 | 1621 | 9.25e-12 | 69.7 |
| Msa1452220 | MtrunA17_Chr2g0326991 | 29.565 | 115 | 79 | 1 | 545 | 657 | 35 | 149 | 5.95e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452220 | AT3G19210.1 | 68.281 | 826 | 234 | 10 | 21 | 833 | 38 | 848 | 0.0 | 1135 |
| Msa1452220 | AT3G19210.2 | 67.191 | 826 | 241 | 11 | 21 | 833 | 38 | 846 | 0.0 | 1109 |
| Msa1452220 | AT3G19210.3 | 68.568 | 754 | 210 | 9 | 21 | 762 | 38 | 776 | 0.0 | 1039 |
| Msa1452220 | AT1G08600.4 | 33.631 | 559 | 296 | 18 | 202 | 700 | 757 | 1300 | 1.60e-75 | 271 |
| Msa1452220 | AT1G08600.3 | 33.631 | 559 | 296 | 18 | 202 | 700 | 757 | 1300 | 1.60e-75 | 271 |
| Msa1452220 | AT1G08600.2 | 33.631 | 559 | 296 | 18 | 202 | 700 | 757 | 1300 | 1.60e-75 | 271 |
| Msa1452220 | AT1G08600.1 | 32.849 | 551 | 290 | 17 | 202 | 700 | 757 | 1279 | 6.56e-73 | 263 |
| Msa1452220 | AT2G18760.3 | 30.556 | 576 | 306 | 17 | 171 | 700 | 430 | 957 | 3.99e-68 | 248 |
| Msa1452220 | AT2G18760.4 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
| Msa1452220 | AT2G18760.1 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
| Msa1452220 | AT2G18760.2 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
| Msa1452220 | AT2G18760.7 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
| Msa1452220 | AT2G18760.5 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
| Msa1452220 | AT2G18760.6 | 30.556 | 576 | 306 | 17 | 171 | 700 | 371 | 898 | 4.05e-68 | 248 |
| Msa1452220 | AT1G03750.1 | 31.274 | 518 | 297 | 13 | 202 | 670 | 167 | 674 | 8.06e-65 | 235 |
| Msa1452220 | AT3G06010.1 | 33.684 | 475 | 269 | 12 | 202 | 672 | 431 | 863 | 5.82e-63 | 232 |
| Msa1452220 | AT5G19310.2 | 32.887 | 523 | 297 | 18 | 202 | 715 | 150 | 627 | 3.59e-61 | 223 |
| Msa1452220 | AT5G19310.1 | 32.567 | 522 | 300 | 17 | 202 | 715 | 414 | 891 | 6.51e-60 | 223 |
| Msa1452220 | AT2G13370.1 | 30.753 | 478 | 280 | 11 | 202 | 671 | 653 | 1087 | 6.85e-58 | 218 |
| Msa1452220 | AT2G13370.2 | 30.753 | 478 | 280 | 11 | 202 | 671 | 653 | 1087 | 6.85e-58 | 218 |
| Msa1452220 | AT2G13370.3 | 30.753 | 478 | 280 | 11 | 202 | 671 | 653 | 1087 | 6.85e-58 | 218 |
| Msa1452220 | AT5G63950.1 | 29.314 | 539 | 295 | 14 | 202 | 697 | 405 | 900 | 9.23e-57 | 213 |
| Msa1452220 | AT5G63950.2 | 29.446 | 523 | 298 | 12 | 202 | 697 | 405 | 883 | 1.01e-56 | 213 |
| Msa1452220 | AT3G06400.2 | 32.558 | 473 | 265 | 14 | 202 | 671 | 217 | 638 | 5.26e-56 | 211 |
| Msa1452220 | AT3G06400.3 | 32.558 | 473 | 265 | 14 | 202 | 671 | 217 | 638 | 5.28e-56 | 211 |
| Msa1452220 | AT3G06400.1 | 32.558 | 473 | 265 | 14 | 202 | 671 | 217 | 638 | 5.79e-56 | 210 |
| Msa1452220 | AT5G18620.1 | 31.667 | 480 | 260 | 15 | 202 | 671 | 222 | 643 | 1.06e-54 | 206 |
| Msa1452220 | AT5G18620.2 | 31.667 | 480 | 260 | 15 | 202 | 671 | 222 | 643 | 1.25e-54 | 206 |
| Msa1452220 | AT2G28290.1 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 7.02e-53 | 202 |
| Msa1452220 | AT2G28290.5 | 31.290 | 473 | 281 | 11 | 202 | 667 | 783 | 1218 | 7.40e-53 | 202 |
| Msa1452220 | AT2G28290.3 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 8.00e-53 | 202 |
| Msa1452220 | AT2G28290.4 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 8.00e-53 | 202 |
| Msa1452220 | AT2G28290.6 | 31.290 | 473 | 281 | 11 | 202 | 667 | 783 | 1218 | 8.97e-53 | 202 |
| Msa1452220 | AT2G28290.2 | 31.290 | 473 | 281 | 11 | 202 | 667 | 782 | 1217 | 9.45e-53 | 202 |
| Msa1452220 | AT3G54280.1 | 28.705 | 533 | 322 | 13 | 202 | 699 | 1479 | 1988 | 6.42e-52 | 199 |
| Msa1452220 | AT3G54280.2 | 28.705 | 533 | 322 | 13 | 202 | 699 | 1510 | 2019 | 6.51e-52 | 199 |
| Msa1452220 | AT2G25170.2 | 27.959 | 490 | 286 | 9 | 202 | 671 | 318 | 760 | 1.56e-51 | 197 |
| Msa1452220 | AT2G25170.1 | 27.959 | 490 | 286 | 9 | 202 | 671 | 301 | 743 | 1.68e-51 | 197 |
| Msa1452220 | AT2G25170.4 | 27.959 | 490 | 286 | 9 | 202 | 671 | 301 | 743 | 1.68e-51 | 197 |
| Msa1452220 | AT2G25170.3 | 27.959 | 490 | 286 | 9 | 202 | 671 | 327 | 769 | 1.69e-51 | 197 |
| Msa1452220 | AT5G66750.1 | 27.593 | 511 | 331 | 8 | 202 | 705 | 230 | 708 | 2.49e-51 | 194 |
| Msa1452220 | AT4G31900.3 | 29.019 | 479 | 282 | 12 | 202 | 676 | 253 | 677 | 2.53e-51 | 196 |
| Msa1452220 | AT2G46020.2 | 31.522 | 460 | 259 | 12 | 202 | 644 | 1009 | 1429 | 3.00e-51 | 197 |
| Msa1452220 | AT2G46020.3 | 31.522 | 460 | 259 | 12 | 202 | 644 | 1009 | 1429 | 3.00e-51 | 197 |
| Msa1452220 | AT2G46020.4 | 31.522 | 460 | 259 | 12 | 202 | 644 | 1009 | 1429 | 3.00e-51 | 197 |
| Msa1452220 | AT4G31900.1 | 29.019 | 479 | 282 | 12 | 202 | 676 | 253 | 677 | 3.31e-51 | 196 |
| Msa1452220 | AT4G31900.2 | 29.019 | 479 | 282 | 12 | 202 | 676 | 212 | 636 | 3.87e-51 | 196 |
| Msa1452220 | AT2G46020.5 | 30.652 | 460 | 262 | 11 | 202 | 644 | 1009 | 1428 | 7.58e-51 | 196 |
| Msa1452220 | AT2G46020.1 | 30.652 | 460 | 262 | 11 | 202 | 644 | 1009 | 1428 | 7.58e-51 | 196 |
| Msa1452220 | AT2G46020.6 | 30.652 | 460 | 262 | 11 | 202 | 644 | 1009 | 1428 | 7.58e-51 | 196 |
| Msa1452220 | AT2G02090.1 | 31.115 | 511 | 270 | 17 | 202 | 659 | 242 | 723 | 1.49e-47 | 182 |
| Msa1452220 | AT5G44800.1 | 27.615 | 478 | 287 | 13 | 202 | 667 | 717 | 1147 | 1.73e-43 | 172 |
| Msa1452220 | AT2G44980.1 | 27.632 | 532 | 304 | 19 | 202 | 709 | 80 | 554 | 6.87e-43 | 169 |
| Msa1452220 | AT2G44980.2 | 27.757 | 544 | 307 | 20 | 202 | 709 | 80 | 573 | 1.42e-41 | 165 |
| Msa1452220 | AT2G44980.3 | 27.757 | 544 | 307 | 20 | 202 | 709 | 79 | 572 | 1.74e-41 | 164 |
| Msa1452220 | AT3G12810.2 | 30.303 | 297 | 176 | 8 | 202 | 492 | 560 | 831 | 1.53e-29 | 127 |
| Msa1452220 | AT3G12810.2 | 36.994 | 173 | 98 | 3 | 522 | 694 | 1071 | 1232 | 1.89e-25 | 114 |
| Msa1452220 | AT3G12810.1 | 30.303 | 297 | 176 | 8 | 202 | 492 | 564 | 835 | 1.64e-29 | 127 |
| Msa1452220 | AT3G12810.1 | 36.994 | 173 | 98 | 3 | 522 | 694 | 1075 | 1236 | 2.01e-25 | 114 |
| Msa1452220 | AT3G57300.1 | 37.912 | 182 | 106 | 4 | 521 | 701 | 1205 | 1380 | 4.72e-27 | 119 |
| Msa1452220 | AT3G57300.1 | 27.273 | 286 | 187 | 7 | 202 | 477 | 614 | 888 | 1.27e-22 | 105 |
| Msa1452220 | AT3G57300.4 | 37.912 | 182 | 106 | 4 | 521 | 701 | 1205 | 1380 | 4.72e-27 | 119 |
| Msa1452220 | AT3G57300.4 | 27.273 | 286 | 187 | 7 | 202 | 477 | 614 | 888 | 1.27e-22 | 105 |
| Msa1452220 | AT3G57300.2 | 37.912 | 182 | 106 | 4 | 521 | 701 | 1238 | 1413 | 4.86e-27 | 119 |
| Msa1452220 | AT3G57300.2 | 24.765 | 319 | 186 | 7 | 202 | 477 | 614 | 921 | 6.28e-21 | 99.8 |
| Msa1452220 | AT1G02670.6 | 25.753 | 598 | 346 | 23 | 168 | 696 | 95 | 663 | 6.16e-25 | 111 |
| Msa1452220 | AT1G02670.3 | 25.753 | 598 | 346 | 23 | 168 | 696 | 122 | 690 | 8.68e-25 | 111 |
| Msa1452220 | AT2G21450.2 | 24.803 | 508 | 312 | 13 | 202 | 670 | 302 | 778 | 1.34e-24 | 111 |
| Msa1452220 | AT2G21450.1 | 24.803 | 508 | 312 | 13 | 202 | 670 | 295 | 771 | 1.37e-24 | 110 |
| Msa1452220 | AT2G21450.3 | 24.803 | 508 | 312 | 14 | 202 | 670 | 204 | 680 | 1.66e-24 | 110 |
| Msa1452220 | AT1G05490.1 | 27.013 | 385 | 231 | 10 | 302 | 671 | 1003 | 1352 | 1.84e-24 | 111 |
| Msa1452220 | AT3G24340.1 | 23.954 | 526 | 320 | 15 | 201 | 690 | 618 | 1099 | 7.57e-24 | 108 |
| Msa1452220 | AT3G42670.2 | 23.468 | 571 | 336 | 19 | 202 | 709 | 715 | 1247 | 1.11e-23 | 108 |
| Msa1452220 | AT3G42670.3 | 23.468 | 571 | 336 | 19 | 202 | 709 | 715 | 1247 | 1.11e-23 | 108 |
| Msa1452220 | AT3G42670.1 | 23.468 | 571 | 336 | 19 | 202 | 709 | 715 | 1247 | 1.11e-23 | 108 |
| Msa1452220 | AT3G42670.4 | 23.468 | 571 | 336 | 19 | 202 | 709 | 717 | 1249 | 1.14e-23 | 108 |
| Msa1452220 | AT3G57300.3 | 27.273 | 286 | 187 | 7 | 202 | 477 | 614 | 888 | 1.38e-22 | 105 |
| Msa1452220 | AT5G20420.1 | 23.836 | 537 | 309 | 18 | 202 | 675 | 720 | 1219 | 3.16e-22 | 103 |
| Msa1452220 | AT5G43530.1 | 34.444 | 180 | 109 | 5 | 517 | 695 | 1105 | 1276 | 1.26e-21 | 102 |
| Msa1452220 | AT5G05130.1 | 36.145 | 166 | 95 | 3 | 526 | 680 | 712 | 877 | 8.54e-20 | 95.9 |
| Msa1452220 | AT5G22750.1 | 36.813 | 182 | 102 | 6 | 517 | 696 | 859 | 1029 | 1.05e-19 | 95.5 |
| Msa1452220 | AT5G22750.1 | 25.086 | 291 | 159 | 11 | 220 | 477 | 475 | 739 | 2.76e-13 | 74.7 |
| Msa1452220 | AT1G05120.1 | 33.333 | 180 | 112 | 5 | 519 | 696 | 659 | 832 | 2.53e-16 | 84.3 |
| Msa1452220 | AT1G05120.2 | 33.333 | 180 | 112 | 5 | 519 | 696 | 702 | 875 | 2.62e-16 | 84.3 |
| Msa1452220 | AT1G02670.7 | 32.768 | 177 | 112 | 4 | 521 | 695 | 495 | 666 | 5.56e-15 | 79.7 |
| Msa1452220 | AT1G02670.1 | 34.615 | 156 | 96 | 3 | 541 | 695 | 527 | 677 | 5.75e-15 | 79.7 |
| Msa1452220 | AT1G50410.2 | 32.692 | 156 | 100 | 3 | 541 | 695 | 828 | 979 | 1.19e-13 | 75.9 |
| Msa1452220 | AT1G50410.1 | 32.692 | 156 | 100 | 3 | 541 | 695 | 828 | 979 | 1.19e-13 | 75.9 |
| Msa1452220 | AT1G50410.3 | 32.692 | 156 | 100 | 3 | 541 | 695 | 828 | 979 | 1.19e-13 | 75.9 |
| Msa1452220 | AT1G61140.3 | 29.560 | 159 | 109 | 2 | 540 | 698 | 966 | 1121 | 1.35e-13 | 75.9 |
| Msa1452220 | AT1G61140.1 | 29.560 | 159 | 109 | 2 | 540 | 698 | 1124 | 1279 | 1.58e-13 | 75.9 |
| Msa1452220 | AT3G20010.1 | 30.968 | 155 | 104 | 2 | 541 | 695 | 894 | 1045 | 5.44e-13 | 73.9 |
| Msa1452220 | AT3G20010.5 | 30.968 | 155 | 104 | 2 | 541 | 695 | 894 | 1045 | 5.44e-13 | 73.9 |
| Msa1452220 | AT3G20010.7 | 30.968 | 155 | 104 | 2 | 541 | 695 | 894 | 1045 | 5.44e-13 | 73.9 |
| Msa1452220 | AT3G20010.3 | 30.968 | 155 | 104 | 2 | 541 | 695 | 628 | 779 | 5.71e-13 | 73.6 |
| Msa1452220 | AT3G20010.2 | 30.968 | 155 | 104 | 2 | 541 | 695 | 603 | 754 | 6.75e-13 | 73.2 |
| Msa1452220 | AT1G11100.5 | 28.205 | 156 | 109 | 2 | 540 | 695 | 929 | 1081 | 7.76e-13 | 73.2 |
| Msa1452220 | AT1G11100.5 | 26.642 | 274 | 159 | 9 | 223 | 474 | 486 | 739 | 2.64e-12 | 71.6 |
| Msa1452220 | AT1G11100.3 | 28.205 | 156 | 109 | 2 | 540 | 695 | 973 | 1125 | 7.87e-13 | 73.2 |
| Msa1452220 | AT1G11100.1 | 28.205 | 156 | 109 | 2 | 540 | 695 | 1072 | 1224 | 8.24e-13 | 73.2 |
| Msa1452220 | AT1G11100.1 | 26.642 | 274 | 159 | 9 | 223 | 474 | 629 | 882 | 1.86e-12 | 72.0 |
| Msa1452220 | AT1G11100.4 | 28.205 | 156 | 109 | 2 | 540 | 695 | 1116 | 1268 | 9.31e-13 | 73.2 |
| Msa1452220 | AT2G40770.2 | 30.387 | 181 | 112 | 5 | 541 | 710 | 1451 | 1628 | 9.50e-13 | 73.2 |
| Msa1452220 | AT2G40770.1 | 30.387 | 181 | 112 | 5 | 541 | 710 | 1451 | 1628 | 9.50e-13 | 73.2 |
| Msa1452220 | AT2G40770.3 | 30.387 | 181 | 112 | 5 | 541 | 710 | 1451 | 1628 | 9.50e-13 | 73.2 |
| Msa1452220 | AT1G11100.2 | 28.205 | 156 | 109 | 2 | 540 | 695 | 1115 | 1267 | 9.55e-13 | 73.2 |
Find 219 sgRNAs with CRISPR-Local
Find 779 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTCACACTCATCTATTT+TGG | 0.148567 | tig0033735:+19624 | Msa1452220:three_prime_UTR |
| CAATATCAATGGATGCATTT+TGG | 0.198230 | tig0033735:+10480 | Msa1452220:CDS |
| TTTCTGTAGCTTGGGACTTA+TGG | 0.211088 | tig0033735:-19236 | None:intergenic |
| GGTTCTCTTCCGCAAATTAT+TGG | 0.231882 | tig0033735:-11655 | None:intergenic |
| GTCAGAGATTCATGAAAATA+TGG | 0.234542 | tig0033735:+18538 | Msa1452220:CDS |
| GGAGGCTGGGTTGAGCTTTC+CGG | 0.242395 | tig0033735:+13713 | Msa1452220:CDS |
| CTTGCAGCCCATCATTGTTT+TGG | 0.246541 | tig0033735:-18574 | None:intergenic |
| TTGTGAAACTTGTTCAATTT+CGG | 0.249942 | tig0033735:-9775 | None:intergenic |
| ACTGAAGCAATCGAAGATTT+TGG | 0.250959 | tig0033735:+13134 | Msa1452220:CDS |
| TTCCCTCCAAATATGTTATC+TGG | 0.256084 | tig0033735:+13580 | Msa1452220:CDS |
| TTTACTAATCCTGGAATATT+GGG | 0.261164 | tig0033735:+11318 | Msa1452220:CDS |
| TACCGTCCAGATAACATATT+TGG | 0.264438 | tig0033735:-13586 | None:intergenic |
| CTACTTAAATCTTCTTCTAA+TGG | 0.272036 | tig0033735:-18921 | None:intergenic |
| AAGTCCCAAGCTACAGAAAA+AGG | 0.281198 | tig0033735:+19240 | Msa1452220:CDS |
| CGATAAGGTTACCTTTGATT+AGG | 0.288517 | tig0033735:-9821 | None:intergenic |
| CAAAATGCATCCATTGATAT+TGG | 0.302911 | tig0033735:-10479 | None:intergenic |
| GCTGTCAGGAACTCCTTTGC+AGG | 0.303531 | tig0033735:+11165 | Msa1452220:CDS |
| TTTGGACATTAACGTAATAT+TGG | 0.307741 | tig0033735:+19642 | Msa1452220:three_prime_UTR |
| TTTACTTGTTTATCATTTGC+TGG | 0.308586 | tig0033735:-16535 | None:intergenic |
| GGTTGTGGACTCAATTTGAT+TGG | 0.311504 | tig0033735:+16475 | Msa1452220:CDS |
| GCATGACACATTGGCAATAT+TGG | 0.316681 | tig0033735:-19347 | None:intergenic |
| TTCCTCAAACGCAGGTTAAA+CGG | 0.326315 | tig0033735:+13097 | Msa1452220:intron |
| GATAAGGTTACCTTTGATTA+GGG | 0.328831 | tig0033735:-9820 | None:intergenic |
| GCGCTACATCAATCAGTAAA+AGG | 0.330521 | tig0033735:+16271 | Msa1452220:CDS |
| GCGGAGGTGGGAATAGAAAT+AGG | 0.333995 | tig0033735:-10011 | None:intergenic |
| GTCTTCACAAACCAAGTTGA+TGG | 0.337292 | tig0033735:+19193 | Msa1452220:CDS |
| GTTGTGGACTCAATTTGATT+GGG | 0.337346 | tig0033735:+16476 | Msa1452220:CDS |
| TTCATTTACAAGAGAGTGTT+TGG | 0.337869 | tig0033735:-19452 | None:intergenic |
| AGAAGAAGATTTAAGTAGTT+GGG | 0.343059 | tig0033735:+18926 | Msa1452220:CDS |
| CTGCTTGAACGACCCGTCTA+AGG | 0.353082 | tig0033735:+16308 | Msa1452220:CDS |
| GGACAGGAGGGGATGGAGGC+TGG | 0.354683 | tig0033735:+13699 | Msa1452220:CDS |
| GCTGAGATTGCAGGCTGCTT+AGG | 0.355655 | tig0033735:+18668 | Msa1452220:CDS |
| AACAGGCCGCAGCAAGAGTT+TGG | 0.360517 | tig0033735:+16653 | Msa1452220:intron |
| TCCTCAAAACCTGAAGTTCC+TGG | 0.363361 | tig0033735:-13544 | None:intergenic |
| AGTGGGAGCCCAGGAACTTC+AGG | 0.363722 | tig0033735:+13535 | Msa1452220:CDS |
| CTACCAGTCTCGTTAGCAAT+TGG | 0.369976 | tig0033735:+10712 | Msa1452220:CDS |
| TCATTTGCTGGATTCCAATC+AGG | 0.370586 | tig0033735:-16523 | None:intergenic |
| TTCTCTTCTGCAGTAGCAGC+AGG | 0.380163 | tig0033735:-11676 | None:intergenic |
| AGTGAGGGTACTTTCGTTCC+CGG | 0.381753 | tig0033735:-16236 | None:intergenic |
| AGCAGCAAGGCTGGTGGTTG+TGG | 0.382521 | tig0033735:+16460 | Msa1452220:CDS |
| GGTGGATTTGCTGAGATTGC+AGG | 0.385206 | tig0033735:+18659 | Msa1452220:CDS |
| ATTAAGTGCCAAAGTTAATC+AGG | 0.387595 | tig0033735:+11726 | Msa1452220:CDS |
| CGCCACACCTTTGACTGAGT+TGG | 0.387992 | tig0033735:+10031 | Msa1452220:CDS |
| CATGCTCATCTTCGATTGCT+TGG | 0.388152 | tig0033735:+19365 | Msa1452220:CDS |
| CTGAGATTGCAGGCTGCTTA+GGG | 0.395876 | tig0033735:+18669 | Msa1452220:CDS |
| AAATATTACCTGATTAACTT+TGG | 0.396814 | tig0033735:-11734 | None:intergenic |
| TCCTCAAACGCAGGTTAAAC+GGG | 0.396884 | tig0033735:+13098 | Msa1452220:intron |
| TACCCTCACTTGAGGCTTGA+TGG | 0.397234 | tig0033735:+16249 | Msa1452220:CDS |
| AGCTTATTGCGTAAAGCAAA+AGG | 0.398267 | tig0033735:-19304 | None:intergenic |
| GCATCAGATGGTGGTTTAAA+CGG | 0.405259 | tig0033735:-9909 | None:intergenic |
| TACAAGAGAGTGGCCATCAT+TGG | 0.407276 | tig0033735:-19509 | None:intergenic |
| TCGTCTTGTTTGATCCTGAT+TGG | 0.408082 | tig0033735:+16509 | Msa1452220:CDS |
| AGAGGTTGCCAGAGTATTAG+AGG | 0.417246 | tig0033735:-10122 | None:intergenic |
| AGTCAAAGGTGTGGCGGAGG+TGG | 0.419591 | tig0033735:-10024 | None:intergenic |
| TAGAAGAAGATTTAAGTAGT+TGG | 0.420677 | tig0033735:+18925 | Msa1452220:CDS |
| ACGATTGTCTCTTGACGATA+AGG | 0.426282 | tig0033735:-9836 | None:intergenic |
| CAATGCGATCATTTGTTCTC+TGG | 0.427762 | tig0033735:-13775 | None:intergenic |
| TTTAACCTGGAATTTGCCTT+GGG | 0.429767 | tig0033735:-10838 | None:intergenic |
| CACAGCCTCCTCTTTGTGAT+CGG | 0.429771 | tig0033735:-10066 | None:intergenic |
| GCAATGCCGCCCAATATTCC+AGG | 0.433353 | tig0033735:-11327 | None:intergenic |
| AAGTCCCCAAGGCAAATTCC+AGG | 0.435069 | tig0033735:+10833 | Msa1452220:CDS |
| TACCAGTCTCGTTAGCAATT+GGG | 0.448605 | tig0033735:+10713 | Msa1452220:CDS |
| TCGCAAAAGGTTTGTCCCAT+GGG | 0.448696 | tig0033735:+9977 | Msa1452220:CDS |
| GATGATGAAACCGCTGATAT+AGG | 0.450682 | tig0033735:+18638 | Msa1452220:CDS |
| TTCATGTTTGATTGTGTCGC+TGG | 0.455017 | tig0033735:+10442 | Msa1452220:CDS |
| TTCTTTGTAGGTCTGGATCA+TGG | 0.456442 | tig0033735:+13678 | Msa1452220:intron |
| ATTTAACCTGGAATTTGCCT+TGG | 0.460433 | tig0033735:-10839 | None:intergenic |
| AGTATTAGAGGATCAATTCC+AGG | 0.462390 | tig0033735:-10110 | None:intergenic |
| GTAGGCTTTCTGCTCGCAAA+AGG | 0.467278 | tig0033735:+9964 | Msa1452220:CDS |
| AAAATGCATCCATTGATATT+GGG | 0.469154 | tig0033735:-10478 | None:intergenic |
| TTCCGGTAAAATGCAAGTCT+TGG | 0.471756 | tig0033735:+13730 | Msa1452220:CDS |
| GGTGACCCATTTACCTTAGA+CGG | 0.474246 | tig0033735:-16321 | None:intergenic |
| TTTCGCTCGACGTTGCGGCT+TGG | 0.474343 | tig0033735:-19274 | None:intergenic |
| CACCGTCTGGTACAGAGGTT+GGG | 0.474429 | tig0033735:-18962 | None:intergenic |
| TTTCTCTTAAGCAGCAAGGC+TGG | 0.477168 | tig0033735:+16451 | Msa1452220:CDS |
| TTTGAAAACATCAGAAAAGC+AGG | 0.477246 | tig0033735:+18694 | Msa1452220:CDS |
| TACCCTGCTGATTCCAATGA+TGG | 0.479260 | tig0033735:+19496 | Msa1452220:CDS |
| TGCCGGAACAATAGAAGAAA+AGG | 0.480151 | tig0033735:+16720 | Msa1452220:CDS |
| GCAAATAGCGGCAGCTCCAT+TGG | 0.481461 | tig0033735:-9880 | None:intergenic |
| GACAGGAGGGGATGGAGGCT+GGG | 0.481693 | tig0033735:+13700 | Msa1452220:CDS |
| CTCGCAAAAGGTTTGTCCCA+TGG | 0.482042 | tig0033735:+9976 | Msa1452220:CDS |
| TAAACTTCTCTGAATGCATT+CGG | 0.482667 | tig0033735:-10955 | None:intergenic |
| TTCGATTGCTTGGACGAAGA+AGG | 0.482907 | tig0033735:+19375 | Msa1452220:CDS |
| CTTATTTGTCAAGGTTTCGA+TGG | 0.486969 | tig0033735:+10654 | Msa1452220:CDS |
| TGGCCATCATTGGAATCAGC+AGG | 0.487021 | tig0033735:-19499 | None:intergenic |
| GGATCATGGACAGGAGGGGA+TGG | 0.488306 | tig0033735:+13692 | Msa1452220:CDS |
| GCTTATTGCGTAAAGCAAAA+GGG | 0.490035 | tig0033735:-19303 | None:intergenic |
| GAATTGATCCTCTAATACTC+TGG | 0.490279 | tig0033735:+10114 | Msa1452220:CDS |
| GGGAAGCAGAAATTAAGAAG+TGG | 0.493257 | tig0033735:+10733 | Msa1452220:CDS |
| GAAGAAGATTTAAGTAGTTG+GGG | 0.493552 | tig0033735:+18927 | Msa1452220:CDS |
| TCCTGGGCTCCCACTTCGTA+TGG | 0.496031 | tig0033735:-13527 | None:intergenic |
| GAAGCCTGAAGGACACCGTC+TGG | 0.497770 | tig0033735:-18975 | None:intergenic |
| TGAATACATCAAACCAAACC+TGG | 0.499854 | tig0033735:-19608 | None:intergenic |
| AATCAGTAAAAGGCAAAAGT+TGG | 0.499941 | tig0033735:+16281 | Msa1452220:CDS |
| TTCCCAATTGCTAACGAGAC+TGG | 0.501716 | tig0033735:-10715 | None:intergenic |
| GGGAAGAGAGAGAATGTTGG+AGG | 0.502288 | tig0033735:+9668 | None:intergenic |
| AAATTAGAATTAGAAGGAAG+AGG | 0.504212 | tig0033735:-10140 | None:intergenic |
| ACATATTTGGAGGGAAGAAT+CGG | 0.506607 | tig0033735:-13573 | None:intergenic |
| AGTCGTTGCCAAAACAATGA+TGG | 0.512751 | tig0033735:+18566 | Msa1452220:CDS |
| CTCAGTCAAAGGTGTGGCGG+AGG | 0.513645 | tig0033735:-10027 | None:intergenic |
| ACACCGTCTGGTACAGAGGT+TGG | 0.514170 | tig0033735:-18963 | None:intergenic |
| CAGCGTCAGATGGCAAAAGA+AGG | 0.516297 | tig0033735:+16864 | Msa1452220:CDS |
| CTTGGAAGAATTCTTTGCAA+TGG | 0.517028 | tig0033735:+11290 | Msa1452220:CDS |
| GTTGTGAAATTAGAATTAGA+AGG | 0.517242 | tig0033735:-10146 | None:intergenic |
| GCAGAAATTAAGAAGTGGGT+TGG | 0.517723 | tig0033735:+10738 | Msa1452220:CDS |
| AAACGACAGCGTCGCGGCAC+AGG | 0.519079 | tig0033735:+16914 | Msa1452220:CDS |
| GGTGTCCTTCAGGCTTCAGC+TGG | 0.519955 | tig0033735:+18981 | Msa1452220:CDS |
| GTCAAAGGTGTGGCGGAGGT+GGG | 0.523585 | tig0033735:-10023 | None:intergenic |
| TCAGAGATTCATGAAAATAT+GGG | 0.524219 | tig0033735:+18539 | Msa1452220:CDS |
| GGAAGCAGAAATTAAGAAGT+GGG | 0.524311 | tig0033735:+10734 | Msa1452220:CDS |
| TGTGAGACACCCAATATCAA+TGG | 0.524350 | tig0033735:+10469 | Msa1452220:CDS |
| AGGTTTCGATGGGAAGCCTA+TGG | 0.524430 | tig0033735:+10665 | Msa1452220:CDS |
| CTATATACTCTTATTTGTCA+AGG | 0.527026 | tig0033735:+10645 | Msa1452220:CDS |
| TCAGAGAAGTTTAGCTCTAG+TGG | 0.527590 | tig0033735:+10965 | Msa1452220:CDS |
| TTGGGACTTATGGAGTCAAC+CGG | 0.528661 | tig0033735:-19226 | None:intergenic |
| GCAGCAAGAGTTTGGAGGGA+TGG | 0.529039 | tig0033735:+16661 | Msa1452220:CDS |
| TGACACTTCAACTTCTTCAT+CGG | 0.530466 | tig0033735:-9736 | None:intergenic |
| GGCAAAAGAAGGGCTGCAAA+AGG | 0.530881 | tig0033735:+16875 | Msa1452220:CDS |
| ACAAGACAAGATGTTATCTC+CGG | 0.533450 | tig0033735:+10795 | Msa1452220:CDS |
| ACCATACGAAGTGGGAGCCC+AGG | 0.536781 | tig0033735:+13526 | Msa1452220:CDS |
| CTCTTAAGCAGCAAGGCTGG+TGG | 0.536926 | tig0033735:+16454 | Msa1452220:CDS |
| GGTGTTTAATGCTACACTCA+TGG | 0.538171 | tig0033735:-19431 | None:intergenic |
| TGGGAAGCCTATGGTTAGAA+AGG | 0.541851 | tig0033735:+10674 | Msa1452220:CDS |
| TGTAGGTCTGGATCATGGAC+AGG | 0.545351 | tig0033735:+13683 | Msa1452220:intron |
| ATAAAGGCTCCAATAATTTG+CGG | 0.545607 | tig0033735:+11646 | Msa1452220:intron |
| GTACCAGCTTTCCATCAACT+TGG | 0.548719 | tig0033735:-19204 | None:intergenic |
| AAGAGTATATAGTAATGTGA+TGG | 0.554919 | tig0033735:-10634 | None:intergenic |
| TTATTTGTCAAGGTTTCGAT+GGG | 0.555614 | tig0033735:+10655 | Msa1452220:CDS |
| GTGCCACTTGCAGAATGACT+TGG | 0.555828 | tig0033735:+11272 | Msa1452220:intron |
| AAACCAAGTTGATGGAAAGC+TGG | 0.556394 | tig0033735:+19201 | Msa1452220:CDS |
| GTGACCCATTTACCTTAGAC+GGG | 0.556601 | tig0033735:-16320 | None:intergenic |
| GGATAGATCCTCACCTGCAA+AGG | 0.556723 | tig0033735:-11178 | None:intergenic |
| CGTCCAGATAACATATTTGG+AGG | 0.557645 | tig0033735:-13583 | None:intergenic |
| CCTCAAAACCTGAAGTTCCT+GGG | 0.561955 | tig0033735:-13543 | None:intergenic |
| TCATGGACAGGAGGGGATGG+AGG | 0.565542 | tig0033735:+13695 | Msa1452220:CDS |
| CGCCATCAAGCCTCAAGTGA+GGG | 0.567392 | tig0033735:-16251 | None:intergenic |
| TCAGGCTTCAGCTGGTGATG+AGG | 0.569815 | tig0033735:+18989 | Msa1452220:CDS |
| TTCAAATCCAACTCAGTCAA+AGG | 0.570280 | tig0033735:-10038 | None:intergenic |
| GGTCTGGATCATGGACAGGA+GGG | 0.572508 | tig0033735:+13687 | Msa1452220:intron |
| GGAGATAACATCTTGTCTTG+TGG | 0.573387 | tig0033735:-10793 | None:intergenic |
| CGAAGGAAACGAACAAGCAA+AGG | 0.574392 | tig0033735:-10182 | None:intergenic |
| AGTTGATGGAAAGCTGGTAC+CGG | 0.574626 | tig0033735:+19207 | Msa1452220:CDS |
| AGCAAAACTCTACGTTTACA+CGG | 0.575953 | tig0033735:-11145 | None:intergenic |
| CGAAGATGAGCATGACACAT+TGG | 0.576913 | tig0033735:-19356 | None:intergenic |
| AGGCCGCAGCAAGAGTTTGG+AGG | 0.577911 | tig0033735:+16656 | Msa1452220:intron |
| CCGAGAGTATATTCCACCAA+TGG | 0.578254 | tig0033735:+9864 | Msa1452220:CDS |
| ATATTTCATTTACAAGAGAG+TGG | 0.580539 | tig0033735:-19519 | None:intergenic |
| AGCGTCAGATGGCAAAAGAA+GGG | 0.581477 | tig0033735:+16865 | Msa1452220:CDS |
| ACTGGTAGGAGTGACGATGA+TGG | 0.581982 | tig0033735:-10697 | None:intergenic |
| AAGGACACCGTCTGGTACAG+AGG | 0.582567 | tig0033735:-18967 | None:intergenic |
| GTCTGGATCATGGACAGGAG+GGG | 0.585787 | tig0033735:+13688 | Msa1452220:CDS |
| GGCCGCAGCAAGAGTTTGGA+GGG | 0.586014 | tig0033735:+16657 | Msa1452220:intron |
| ATGATGGCCTTTCTAACCAT+AGG | 0.587048 | tig0033735:-10681 | None:intergenic |
| AATGTAGAAGCCCTAATCAA+AGG | 0.590235 | tig0033735:+9810 | Msa1452220:CDS |
| TTCCCAACCTCTGTACCAGA+CGG | 0.590421 | tig0033735:+18960 | Msa1452220:CDS |
| GTCGTTGCCAAAACAATGAT+GGG | 0.591538 | tig0033735:+18567 | Msa1452220:CDS |
| TCAATGATTAATAGCGAATG+TGG | 0.593152 | tig0033735:+18614 | Msa1452220:CDS |
| TTTGGCAGATGATATGGGGT+GGG | 0.593486 | tig0033735:+10498 | Msa1452220:CDS |
| CTCCAAATATGTTATCTGGA+CGG | 0.594835 | tig0033735:+13584 | Msa1452220:CDS |
| CGCAAAAGGTTTGTCCCATG+GGG | 0.595104 | tig0033735:+9978 | Msa1452220:CDS |
| AATAGCGGCAGCTCCATTGG+TGG | 0.598029 | tig0033735:-9877 | None:intergenic |
| ACTTGTAAAACTGTTAATCC+CGG | 0.599926 | tig0033735:-10814 | None:intergenic |
| GTAAAATACACTACCTTCGG+TGG | 0.602347 | tig0033735:-11994 | None:intergenic |
| TTGTGGACTCAATTTGATTG+GGG | 0.604497 | tig0033735:+16477 | Msa1452220:CDS |
| GTAGGTCTACCAGCGTCAGA+TGG | 0.604843 | tig0033735:+16854 | Msa1452220:intron |
| CCATTGGTGGAATATACTCT+CGG | 0.605305 | tig0033735:-9864 | None:intergenic |
| CTTATTGCGTAAAGCAAAAG+GGG | 0.605558 | tig0033735:-19302 | None:intergenic |
| ACGAACAAGCAAAGGATCAA+CGG | 0.607307 | tig0033735:-10174 | None:intergenic |
| CAAGACAAGATGTTATCTCC+GGG | 0.609431 | tig0033735:+10796 | Msa1452220:CDS |
| CATCACCAGCTGAAGCCTGA+AGG | 0.612055 | tig0033735:-18986 | None:intergenic |
| CAATTTGTTTACTTTCGATG+AGG | 0.612759 | tig0033735:+17051 | Msa1452220:CDS |
| ATCCCTCCAAACTCTTGCTG+CGG | 0.615336 | tig0033735:-16659 | None:intergenic |
| GTATTAGAGGATCAATTCCA+GGG | 0.615797 | tig0033735:-10109 | None:intergenic |
| CCTTGTCTCAAACTATACTC+AGG | 0.616189 | tig0033735:+13799 | Msa1452220:CDS |
| GTCCAGATAACATATTTGGA+GGG | 0.617579 | tig0033735:-13582 | None:intergenic |
| ATCAAATCACTTACCACCGA+AGG | 0.617600 | tig0033735:+11981 | Msa1452220:CDS |
| AAAGTTATGCAATCATCCAA+AGG | 0.620113 | tig0033735:+13176 | Msa1452220:CDS |
| TGTGAGCCTCGTCACAGATG+AGG | 0.620502 | tig0033735:-11000 | None:intergenic |
| TGGTTTCACAAAGAGCAACA+AGG | 0.624538 | tig0033735:-10773 | None:intergenic |
| CAATTGCTAACGAGACTGGT+AGG | 0.629478 | tig0033735:-10711 | None:intergenic |
| GGCTGCAAAAGGTCATTCAG+AGG | 0.630643 | tig0033735:+16886 | Msa1452220:CDS |
| GCGCCATCAAGCCTCAAGTG+AGG | 0.631216 | tig0033735:-16252 | None:intergenic |
| ACTTATTTGATGCAGAGAAG+GGG | 0.631972 | tig0033735:+10414 | Msa1452220:intron |
| TTATCGTTGTAAGCATCAGA+TGG | 0.634634 | tig0033735:-9921 | None:intergenic |
| GTAAAATGCAAGTCTTGGCA+AGG | 0.636758 | tig0033735:+13735 | Msa1452220:CDS |
| TCGTTGTAAGCATCAGATGG+TGG | 0.638376 | tig0033735:-9918 | None:intergenic |
| GTCACAGATGAGGAGATCAC+AGG | 0.639297 | tig0033735:-10990 | None:intergenic |
| GCTGCAAAAGGTCATTCAGA+GGG | 0.643202 | tig0033735:+16887 | Msa1452220:CDS |
| GATGAAACCGCTGATATAGG+TGG | 0.643567 | tig0033735:+18641 | Msa1452220:CDS |
| CCTGAGTATAGTTTGAGACA+AGG | 0.644810 | tig0033735:-13799 | None:intergenic |
| CAACTCAGTCAAAGGTGTGG+CGG | 0.645092 | tig0033735:-10030 | None:intergenic |
| TGATCTCCTCATCTGTGACG+AGG | 0.646770 | tig0033735:+10994 | Msa1452220:CDS |
| TAGGAGTGGTAGAACCCCAT+GGG | 0.648650 | tig0033735:-9992 | None:intergenic |
| ATCCAACTCAGTCAAAGGTG+TGG | 0.648993 | tig0033735:-10033 | None:intergenic |
| GGGTAACTTTCTCTCGACAG+AGG | 0.649359 | tig0033735:+17021 | Msa1452220:intron |
| ACTAATCCTGGAATATTGGG+CGG | 0.654973 | tig0033735:+11321 | Msa1452220:CDS |
| AGCAAATCCACCTATATCAG+CGG | 0.654979 | tig0033735:-18648 | None:intergenic |
| AGGTCTGGATCATGGACAGG+AGG | 0.655391 | tig0033735:+13686 | Msa1452220:intron |
| ATAGGAGTGGTAGAACCCCA+TGG | 0.657942 | tig0033735:-9993 | None:intergenic |
| ATTGCGTAAAGCAAAAGGGG+TGG | 0.658694 | tig0033735:-19299 | None:intergenic |
| TTATATAGATCTGATTGTAG+CGG | 0.658921 | tig0033735:-12968 | None:intergenic |
| GTAAACAAGATCTTGCTCGT+AGG | 0.660412 | tig0033735:+9946 | Msa1452220:CDS |
| GAATATCTCCGATCACAAAG+AGG | 0.662196 | tig0033735:+10058 | Msa1452220:CDS |
| TATATGATACCATACGAAGT+GGG | 0.664757 | tig0033735:+13518 | Msa1452220:CDS |
| GGCCATCATTGGAATCAGCA+GGG | 0.665069 | tig0033735:-19498 | None:intergenic |
| ATATATGATACCATACGAAG+TGG | 0.665493 | tig0033735:+13517 | Msa1452220:CDS |
| TTAACCTGGAATTTGCCTTG+GGG | 0.667752 | tig0033735:-10837 | None:intergenic |
| GAATACATCAAACCAAACCT+GGG | 0.668264 | tig0033735:-19607 | None:intergenic |
| GCAAAACTCTACGTTTACAC+GGG | 0.670969 | tig0033735:-11144 | None:intergenic |
| GGTGGGAATAGAAATAGGAG+TGG | 0.674629 | tig0033735:-10006 | None:intergenic |
| TGATCAGACAATAACAAACA+AGG | 0.675219 | tig0033735:+11033 | Msa1452220:CDS |
| AACGAAAGTACCCTCACTTG+AGG | 0.678598 | tig0033735:+16241 | Msa1452220:CDS |
| GGAGCAAAACGACAGCGTCG+CGG | 0.680180 | tig0033735:+16908 | Msa1452220:CDS |
| ACTGCAGAAGAGAAGAAACT+CGG | 0.683049 | tig0033735:+11685 | Msa1452220:CDS |
| TATCTCCGATCACAAAGAGG+AGG | 0.684028 | tig0033735:+10061 | Msa1452220:CDS |
| AAATTGAACAAGTTTCACAA+CGG | 0.700066 | tig0033735:+9778 | Msa1452220:CDS |
| TATTAGAGGATCAATTCCAG+GGG | 0.720043 | tig0033735:-10108 | None:intergenic |
| ATATTGGATGCAGAACGTAG+TGG | 0.726763 | tig0033735:-19331 | None:intergenic |
| ATTAGAGGATCAATTCCAGG+GGG | 0.774158 | tig0033735:-10107 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATTAAA+GGG | - | tig0033735:12762-12781 | None:intergenic | 0.0% |
| !! | TATATATATATATATATTAA+AGG | - | tig0033735:12763-12782 | None:intergenic | 0.0% |
| !! | TAAAAGGAATATTTAATTAA+AGG | + | tig0033735:15987-16006 | Msa1452220:intron | 10.0% |
| !! | AATGTCTAGTATTTAATATA+GGG | + | tig0033735:12553-12572 | Msa1452220:intron | 15.0% |
| !! | ATATATATATATATATCACC+TGG | + | tig0033735:12808-12827 | Msa1452220:intron | 15.0% |
| !!! | ATTTAGACTATTTTGTTTTT+TGG | + | tig0033735:13203-13222 | Msa1452220:intron | 15.0% |
| !!! | CAATTATTTTTCTTTAACAA+AGG | - | tig0033735:13416-13435 | None:intergenic | 15.0% |
| !! | TTAAAGAAAAATAATTGTGA+AGG | + | tig0033735:13419-13438 | Msa1452220:intron | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | tig0033735:14839-14858 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | tig0033735:14838-14857 | Msa1452220:intron | 15.0% |
| !! | AATAGTATATATAGATCAAA+AGG | - | tig0033735:17099-17118 | None:intergenic | 15.0% |
| !!! | TTTTGATCTATATATACTAT+TGG | + | tig0033735:17098-17117 | Msa1452220:intron | 15.0% |
| !!! | AATTATGTAGATTTAGATTT+TGG | - | tig0033735:17215-17234 | None:intergenic | 15.0% |
| !!! | ATAATTTTCTCAAGATTTTT+AGG | + | tig0033735:17229-17248 | Msa1452220:intron | 15.0% |
| !! | CATTTATTAACTAATTGAAT+TGG | - | tig0033735:18337-18356 | None:intergenic | 15.0% |
| !! | TAAATAATTAAAAAAGGGAA+GGG | - | tig0033735:19053-19072 | None:intergenic | 15.0% |
| !! | ATAAATAATTAAAAAAGGGA+AGG | - | tig0033735:19054-19073 | None:intergenic | 15.0% |
| !!! | GGATTTTTTTTTTTTTTTTG+TGG | - | tig0033735:19120-19139 | None:intergenic | 15.0% |
| !! | TCAGAATATACTAGAAATTA+AGG | + | tig0033735:11447-11466 | Msa1452220:intron | 20.0% |
| !! | GTAATAACAGTAAAAATATG+CGG | - | tig0033735:11517-11536 | None:intergenic | 20.0% |
| !! | AAATATTACCTGATTAACTT+TGG | - | tig0033735:11737-11756 | None:intergenic | 20.0% |
| !!! | AATCAGGTAATATTTTTTCT+TGG | + | tig0033735:11742-11761 | Msa1452220:intron | 20.0% |
| !!! | TCTCTAATGAGATTTTATAT+TGG | - | tig0033735:12406-12425 | None:intergenic | 20.0% |
| !!! | AGTAAAATAGTTTTTACACA+TGG | + | tig0033735:12473-12492 | Msa1452220:intron | 20.0% |
| !! | CTATATTAAATACTAGACAT+TGG | - | tig0033735:12554-12573 | None:intergenic | 20.0% |
| !! | CAATGTCTAGTATTTAATAT+AGG | + | tig0033735:12552-12571 | Msa1452220:intron | 20.0% |
| !!! | AAAACTAGACATTACATTTT+TGG | - | tig0033735:13008-13027 | None:intergenic | 20.0% |
| !!! | AACTATTTCTAACATATAAG+GGG | - | tig0033735:13302-13321 | None:intergenic | 20.0% |
| !!! | GAACTATTTCTAACATATAA+GGG | - | tig0033735:13303-13322 | None:intergenic | 20.0% |
| !! | AGGAAATGAATGAAAATAAA+TGG | - | tig0033735:13377-13396 | None:intergenic | 20.0% |
| !! | GACAAATATATGTGATATAA+GGG | - | tig0033735:13874-13893 | None:intergenic | 20.0% |
| !! | TGACAAATATATGTGATATA+AGG | - | tig0033735:13875-13894 | None:intergenic | 20.0% |
| !!! | AATATACAATAAACTTGCTA+AGG | - | tig0033735:13933-13952 | None:intergenic | 20.0% |
| !! | GTCAAGTTAGATTAAAAAAA+AGG | - | tig0033735:13986-14005 | None:intergenic | 20.0% |
| !! | GTATATGTTAAGAAGAAATA+AGG | - | tig0033735:14430-14449 | None:intergenic | 20.0% |
| !! | TATTTCTTCTTAACATATAC+TGG | + | tig0033735:14430-14449 | Msa1452220:intron | 20.0% |
| !!! | TTTTTTCTTTTTCCAATCAT+TGG | + | tig0033735:14559-14578 | Msa1452220:intron | 20.0% |
| !!! | TTTTTCTTTTTCCAATCATT+GGG | + | tig0033735:14560-14579 | Msa1452220:intron | 20.0% |
| !! | TGGGTATCATAAAATTAAAA+AGG | - | tig0033735:14605-14624 | None:intergenic | 20.0% |
| !! | AAAGTAAATAAACTCAATGA+GGG | + | tig0033735:15867-15886 | Msa1452220:intron | 20.0% |
| !! | ATTAGAATTTGGAAATTTCA+AGG | - | tig0033735:16345-16364 | None:intergenic | 20.0% |
| !!! | AGTCAAAATGTTTTTATCAA+AGG | - | tig0033735:16410-16429 | None:intergenic | 20.0% |
| !! | GAATCTATTAAGTTATTTGT+AGG | + | tig0033735:16836-16855 | Msa1452220:intron | 20.0% |
| !!! | ATAATTTGTTTATGGTTTTC+AGG | + | tig0033735:17000-17019 | Msa1452220:intron | 20.0% |
| !!! | TAATTTGTTTATGGTTTTCA+GGG | + | tig0033735:17001-17020 | Msa1452220:intron | 20.0% |
| !!! | GTTATGATATCTGAAATTTT+CGG | + | tig0033735:17122-17141 | Msa1452220:intron | 20.0% |
| !!! | AATTCTGTTAGAATGATTTT+TGG | + | tig0033735:17431-17450 | Msa1452220:intron | 20.0% |
| !!! | ACTCATAAATATTTTCTACA+TGG | - | tig0033735:18054-18073 | None:intergenic | 20.0% |
| !! | TATAATCATTTACAACAATG+AGG | + | tig0033735:18204-18223 | Msa1452220:intron | 20.0% |
| !! | AAGATAATCATAAAAGAAGT+TGG | + | tig0033735:18386-18405 | Msa1452220:intron | 20.0% |
| !! | ACAAAAAGAACAAATTATTG+TGG | + | tig0033735:18859-18878 | Msa1452220:intron | 20.0% |
| !! | AAATAATTAAAAAAGGGAAG+GGG | - | tig0033735:19052-19071 | None:intergenic | 20.0% |
| !! | AAATTCAATTATGCATCAAA+TGG | - | tig0033735:19141-19160 | None:intergenic | 20.0% |
| !!! | ACTGCTTTTCTATATTTTTT+AGG | + | tig0033735:19162-19181 | Msa1452220:intron | 20.0% |
| !! | TTGTGAAACTTGTTCAATTT+CGG | - | tig0033735:9778-9797 | None:intergenic | 25.0% |
| ! | AAATTGAACAAGTTTCACAA+CGG | + | tig0033735:9778-9797 | Msa1452220:CDS | 25.0% |
| ! | AAATTAGAATTAGAAGGAAG+AGG | - | tig0033735:10143-10162 | None:intergenic | 25.0% |
| ! | GTTGTGAAATTAGAATTAGA+AGG | - | tig0033735:10149-10168 | None:intergenic | 25.0% |
| ! | ATAAAAGGAATTGATTGAGA+AGG | - | tig0033735:10228-10247 | None:intergenic | 25.0% |
| !! | TCTCAATCAATTCCTTTTAT+TGG | + | tig0033735:10228-10247 | Msa1452220:intron | 25.0% |
| ! | AAGATATTGTTTATGCAGTT+TGG | - | tig0033735:10363-10382 | None:intergenic | 25.0% |
| ! | AAAATGCATCCATTGATATT+GGG | - | tig0033735:10481-10500 | None:intergenic | 25.0% |
| !! | AAGAGTATATAGTAATGTGA+TGG | - | tig0033735:10637-10656 | None:intergenic | 25.0% |
| !! | CTATATACTCTTATTTGTCA+AGG | + | tig0033735:10645-10664 | Msa1452220:CDS | 25.0% |
| !! | ATGGTTAATTTTACTAATCC+TGG | + | tig0033735:11309-11328 | Msa1452220:CDS | 25.0% |
| !! | TTTTACTAATCCTGGAATAT+TGG | + | tig0033735:11317-11336 | Msa1452220:CDS | 25.0% |
| ! | TTTACTAATCCTGGAATATT+GGG | + | tig0033735:11318-11337 | Msa1452220:CDS | 25.0% |
| !! | AATTAAGAGCTTAAAGCTTT+TGG | - | tig0033735:11418-11437 | None:intergenic | 25.0% |
| !! | TTTTGCAGTTCATATTAAGA+AGG | + | tig0033735:11944-11963 | Msa1452220:intron | 25.0% |
| ! | AAAGTAAAATACACTACCTT+CGG | - | tig0033735:12000-12019 | None:intergenic | 25.0% |
| !!! | AAAGAGACTTCTGTTTTTTA+AGG | - | tig0033735:12136-12155 | None:intergenic | 25.0% |
| ! | TCTTTCGATTATCTAATGTA+TGG | - | tig0033735:12166-12185 | None:intergenic | 25.0% |
| !! | TTTTACTTAATCTAGCTACT+GGG | - | tig0033735:12460-12479 | None:intergenic | 25.0% |
| !! | ATTTTACTTAATCTAGCTAC+TGG | - | tig0033735:12461-12480 | None:intergenic | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | - | tig0033735:12594-12613 | None:intergenic | 25.0% |
| ! | TTATATAGATCTGATTGTAG+CGG | - | tig0033735:12971-12990 | None:intergenic | 25.0% |
| ! | AATAGTCTAAATCATACCTT+TGG | - | tig0033735:13195-13214 | None:intergenic | 25.0% |
| !!! | CTATTTTGTTTTTTGGATGA+TGG | + | tig0033735:13210-13229 | Msa1452220:intron | 25.0% |
| !!! | CGAACTATTTCTAACATATA+AGG | - | tig0033735:13304-13323 | None:intergenic | 25.0% |
| ! | TTCAGTTAGACTTATACATT+TGG | + | tig0033735:13625-13644 | Msa1452220:intron | 25.0% |
| ! | CAAGTTTATTGTATATTGCT+AGG | + | tig0033735:13936-13955 | Msa1452220:intron | 25.0% |
| ! | ATCTATTATTCTATTCTACC+TGG | + | tig0033735:14019-14038 | Msa1452220:intron | 25.0% |
| ! | TCTATTATTCTATTCTACCT+GGG | + | tig0033735:14020-14039 | Msa1452220:intron | 25.0% |
| ! | GAAAATTAGGAAAAAGCAAT+TGG | - | tig0033735:14280-14299 | None:intergenic | 25.0% |
| ! | AACTAACAATTGAAAAGAAG+CGG | + | tig0033735:14382-14401 | Msa1452220:intron | 25.0% |
| ! | ATGTTAAGAAGAAATAAGGA+TGG | - | tig0033735:14426-14445 | None:intergenic | 25.0% |
| ! | AATTTGTAAATCCCAATGAT+TGG | - | tig0033735:14574-14593 | None:intergenic | 25.0% |
| ! | TATTGAGATGAAAAGAGATT+GGG | - | tig0033735:14624-14643 | None:intergenic | 25.0% |
| ! | TTATTGAGATGAAAAGAGAT+TGG | - | tig0033735:14625-14644 | None:intergenic | 25.0% |
| ! | CATCTCAATAAAAATTCAGT+TGG | + | tig0033735:14634-14653 | Msa1452220:intron | 25.0% |
| !!! | ATAAAAATTCAGTTGGTTTG+TGG | + | tig0033735:14641-14660 | Msa1452220:intron | 25.0% |
| !!! | TAAAAATTCAGTTGGTTTGT+GGG | + | tig0033735:14642-14661 | Msa1452220:intron | 25.0% |
| ! | TATTGTTATGGGAAAATCTT+CGG | - | tig0033735:14789-14808 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | tig0033735:14831-14850 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | tig0033735:14832-14851 | None:intergenic | 25.0% |
| ! | ATATTTAAACCGTGTAACTT+GGG | - | tig0033735:15101-15120 | None:intergenic | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | tig0033735:15104-15123 | Msa1452220:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | tig0033735:15440-15459 | Msa1452220:intron | 25.0% |
| ! | AAAATAGGCTTAGATGATTT+GGG | + | tig0033735:15455-15474 | Msa1452220:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | tig0033735:15582-15601 | Msa1452220:intron | 25.0% |
| ! | GTTCTATCATAAACCAAATT+TGG | - | tig0033735:15622-15641 | None:intergenic | 25.0% |
| ! | TCTACTGATAGAAAACATAA+AGG | - | tig0033735:15734-15753 | None:intergenic | 25.0% |
| ! | ATAACATGATAGTCAAACTT+GGG | - | tig0033735:15839-15858 | None:intergenic | 25.0% |
| ! | AATAACATGATAGTCAAACT+TGG | - | tig0033735:15840-15859 | None:intergenic | 25.0% |
| ! | GAAAGTAAATAAACTCAATG+AGG | + | tig0033735:15866-15885 | Msa1452220:intron | 25.0% |
| ! | AAAATATGATTGTCACTGTT+GGG | - | tig0033735:16035-16054 | None:intergenic | 25.0% |
| ! | AAAAATATGATTGTCACTGT+TGG | - | tig0033735:16036-16055 | None:intergenic | 25.0% |
| ! | GAAGAAACAACATTAGAATT+TGG | - | tig0033735:16356-16375 | None:intergenic | 25.0% |
| !!! | AAACATTTTGACTTATTTGC+AGG | + | tig0033735:16417-16436 | Msa1452220:intron | 25.0% |
| ! | TTTACTTGTTTATCATTTGC+TGG | - | tig0033735:16538-16557 | None:intergenic | 25.0% |
| ! | TGATAAACAAGTAAATACAC+TGG | + | tig0033735:16543-16562 | Msa1452220:intron | 25.0% |
| !!! | ATTTATAGATTTTTGAGTGC+CGG | + | tig0033735:16703-16722 | Msa1452220:CDS | 25.0% |
| !!! | TCTTGTGCATTTTATTGATT+TGG | + | tig0033735:16780-16799 | Msa1452220:intron | 25.0% |
| !!! | AGGATTTTAAAACATGGAAT+AGG | - | tig0033735:16971-16990 | None:intergenic | 25.0% |
| !!! | ATGAGTAGGATTTTAAAACA+TGG | - | tig0033735:16977-16996 | None:intergenic | 25.0% |
| ! | AAACAAATTATGACATGAGT+AGG | - | tig0033735:16991-17010 | None:intergenic | 25.0% |
| !!! | CTCATGTCATAATTTGTTTA+TGG | + | tig0033735:16992-17011 | Msa1452220:intron | 25.0% |
| ! | CTCTAATAGAAAACTGTAAA+TGG | + | tig0033735:17359-17378 | Msa1452220:intron | 25.0% |
| !! | TCACGATTTGAGATTATTTA+AGG | - | tig0033735:17651-17670 | None:intergenic | 25.0% |
| ! | TATAAGCCAATACTAATACA+TGG | + | tig0033735:18123-18142 | Msa1452220:intron | 25.0% |
| ! | ATAAGCCAATACTAATACAT+GGG | + | tig0033735:18124-18143 | Msa1452220:intron | 25.0% |
| ! | TATTGAAACTAACATCAGAT+AGG | + | tig0033735:18233-18252 | Msa1452220:intron | 25.0% |
| ! | ATTGAAACTAACATCAGATA+GGG | + | tig0033735:18234-18253 | Msa1452220:intron | 25.0% |
| ! | TTAACTAATTGAATTGGTAG+AGG | - | tig0033735:18331-18350 | None:intergenic | 25.0% |
| ! | CTGCTTGTTTATATTTCTTT+AGG | + | tig0033735:18516-18535 | Msa1452220:intron | 25.0% |
| ! | TCAGAGATTCATGAAAATAT+GGG | + | tig0033735:18539-18558 | Msa1452220:CDS | 25.0% |
| ! | TTGTATTCCTTTAAATCAAG+AGG | - | tig0033735:18828-18847 | None:intergenic | 25.0% |
| !! | CTTGTAAATATTCTTTTTGC+AGG | + | tig0033735:18890-18909 | Msa1452220:intron | 25.0% |
| !! | TAAATATTCTTTTTGCAGGT+AGG | + | tig0033735:18894-18913 | Msa1452220:intron | 25.0% |
| !! | AAATATTCTTTTTGCAGGTA+GGG | + | tig0033735:18895-18914 | Msa1452220:intron | 25.0% |
| ! | CTACTTAAATCTTCTTCTAA+TGG | - | tig0033735:18924-18943 | None:intergenic | 25.0% |
| ! | TAGAAGAAGATTTAAGTAGT+TGG | + | tig0033735:18925-18944 | Msa1452220:CDS | 25.0% |
| ! | AGAAGAAGATTTAAGTAGTT+GGG | + | tig0033735:18926-18945 | Msa1452220:CDS | 25.0% |
| ! | GAAAATGTGTAAAAAAGCTA+TGG | - | tig0033735:19021-19040 | None:intergenic | 25.0% |
| ! | AATAATTAAAAAAGGGAAGG+GGG | - | tig0033735:19051-19070 | None:intergenic | 25.0% |
| !!! | TTTTTTGTGGTGACATTAAA+TGG | - | tig0033735:19107-19126 | None:intergenic | 25.0% |
| ! | ATATTTCATTTACAAGAGAG+TGG | - | tig0033735:19522-19541 | None:intergenic | 25.0% |
| ! | TTTGGACATTAACGTAATAT+TGG | + | tig0033735:19642-19661 | Msa1452220:three_prime_UTR | 25.0% |
| GATAAGGTTACCTTTGATTA+GGG | - | tig0033735:9823-9842 | None:intergenic | 30.0% | |
| TCTGCATCAAATAAGTAGAA+AGG | - | tig0033735:10410-10429 | None:intergenic | 30.0% | |
| TACTTATTTGATGCAGAGAA+GGG | + | tig0033735:10413-10432 | Msa1452220:intron | 30.0% | |
| CAAAATGCATCCATTGATAT+TGG | - | tig0033735:10482-10501 | None:intergenic | 30.0% | |
| ! | CAATATCAATGGATGCATTT+TGG | + | tig0033735:10480-10499 | Msa1452220:CDS | 30.0% |
| TTATTTGTCAAGGTTTCGAT+GGG | + | tig0033735:10655-10674 | Msa1452220:CDS | 30.0% | |
| ACTTGTAAAACTGTTAATCC+CGG | - | tig0033735:10817-10836 | None:intergenic | 30.0% | |
| AAGTAGCTCGTAATTAAGAA+CGG | - | tig0033735:10871-10890 | None:intergenic | 30.0% | |
| TAAACTTCTCTGAATGCATT+CGG | - | tig0033735:10958-10977 | None:intergenic | 30.0% | |
| TGATCAGACAATAACAAACA+AGG | + | tig0033735:11033-11052 | Msa1452220:CDS | 30.0% | |
| AAATCAGAAACACAAGAGAA+GGG | - | tig0033735:11600-11619 | None:intergenic | 30.0% | |
| AAAATCAGAAACACAAGAGA+AGG | - | tig0033735:11601-11620 | None:intergenic | 30.0% | |
| !!! | TGTGTTTCTGATTTTGATTG+TGG | + | tig0033735:11606-11625 | Msa1452220:intron | 30.0% |
| ATAAAGGCTCCAATAATTTG+CGG | + | tig0033735:11646-11665 | Msa1452220:intron | 30.0% | |
| ATTAAGTGCCAAAGTTAATC+AGG | + | tig0033735:11726-11745 | Msa1452220:CDS | 30.0% | |
| ATGCAATATTTCAGACAGTA+TGG | - | tig0033735:12030-12049 | None:intergenic | 30.0% | |
| GAAAATGCAGAAGATAAGAT+TGG | - | tig0033735:12102-12121 | None:intergenic | 30.0% | |
| ATTATCTAATGTATGGCGTA+GGG | - | tig0033735:12159-12178 | None:intergenic | 30.0% | |
| TTGTGTATAAGTATAGCACA+TGG | - | tig0033735:12335-12354 | None:intergenic | 30.0% | |
| AGAGATAATTATGCTGATCT+TGG | + | tig0033735:12421-12440 | Msa1452220:intron | 30.0% | |
| GAGATAATTATGCTGATCTT+GGG | + | tig0033735:12422-12441 | Msa1452220:intron | 30.0% | |
| TTACACATGGAGAAATCTTT+AGG | + | tig0033735:12486-12505 | Msa1452220:intron | 30.0% | |
| !! | ATGGAGAAATCTTTAGGATT+TGG | + | tig0033735:12492-12511 | Msa1452220:intron | 30.0% |
| ! | ATAGAAGACACCTTTTATGA+AGG | + | tig0033735:12581-12600 | Msa1452220:intron | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | + | tig0033735:12643-12662 | Msa1452220:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | - | tig0033735:12649-12668 | None:intergenic | 30.0% | |
| AAAGTGAAAATCACACCTTA+AGG | + | tig0033735:12691-12710 | Msa1452220:intron | 30.0% | |
| ! | TTTTAACAAGTCACACCTTA+AGG | - | tig0033735:12709-12728 | None:intergenic | 30.0% |
| ! | GTTTCTTTTCATGTGCTTTA+AGG | - | tig0033735:12848-12867 | None:intergenic | 30.0% |
| CACATGAAAAGAAACTGTAT+TGG | + | tig0033735:12853-12872 | Msa1452220:intron | 30.0% | |
| ATCTGTACCACAAAAGTAAA+AGG | - | tig0033735:12920-12939 | None:intergenic | 30.0% | |
| AAAGTTATGCAATCATCCAA+AGG | + | tig0033735:13176-13195 | Msa1452220:CDS | 30.0% | |
| !!! | TTTGTTTTTTGGATGATGGA+AGG | + | tig0033735:13214-13233 | Msa1452220:intron | 30.0% |
| TGCAAGACATTATTATTGTG+AGG | - | tig0033735:13493-13512 | None:intergenic | 30.0% | |
| ATATATGATACCATACGAAG+TGG | + | tig0033735:13517-13536 | Msa1452220:CDS | 30.0% | |
| TATATGATACCATACGAAGT+GGG | + | tig0033735:13518-13537 | Msa1452220:CDS | 30.0% | |
| CCACAATTTAGTCATTCTAA+GGG | + | tig0033735:13650-13669 | Msa1452220:intron | 30.0% | |
| CACAATTTAGTCATTCTAAG+GGG | + | tig0033735:13651-13670 | Msa1452220:intron | 30.0% | |
| ! | ACAATTTAGTCATTCTAAGG+GGG | + | tig0033735:13652-13671 | Msa1452220:intron | 30.0% |
| TCAAACTATACTCAGGTATA+TGG | + | tig0033735:13806-13825 | Msa1452220:intron | 30.0% | |
| ! | ATCAACAGCTTTTCAATTTG+GGG | - | tig0033735:14081-14100 | None:intergenic | 30.0% |
| ! | CATCAACAGCTTTTCAATTT+GGG | - | tig0033735:14082-14101 | None:intergenic | 30.0% |
| GAAAAAGCAATTGGCAAATT+GGG | - | tig0033735:14271-14290 | None:intergenic | 30.0% | |
| ACTATTAGTGGTAAAGTTGT+TGG | - | tig0033735:14345-14364 | None:intergenic | 30.0% | |
| TTGACGGTTAAAACTATTAG+TGG | - | tig0033735:14357-14376 | None:intergenic | 30.0% | |
| !!! | ACTAATAGTTTTAACCGTCA+AGG | + | tig0033735:14356-14375 | Msa1452220:intron | 30.0% |
| AATTGTTAGTTAGACCTTGA+CGG | - | tig0033735:14373-14392 | None:intergenic | 30.0% | |
| ! | AATGAACATGAAAAGCATGT+TGG | + | tig0033735:14485-14504 | Msa1452220:intron | 30.0% |
| !! | AAAAATTCAGTTGGTTTGTG+GGG | + | tig0033735:14643-14662 | Msa1452220:intron | 30.0% |
| ! | GAAGATTTTCCCATAACAAT+AGG | + | tig0033735:14788-14807 | Msa1452220:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | tig0033735:14850-14869 | Msa1452220:intron | 30.0% |
| TATATGGAATGTAACTTCAG+CGG | + | tig0033735:15025-15044 | Msa1452220:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+GGG | - | tig0033735:15100-15119 | None:intergenic | 30.0% | |
| GATATTTAAACCGTGTAACT+TGG | - | tig0033735:15102-15121 | None:intergenic | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | tig0033735:15103-15122 | Msa1452220:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | tig0033735:15436-15455 | None:intergenic | 30.0% |
| GAAAATAGGCTTAGATGATT+TGG | + | tig0033735:15454-15473 | Msa1452220:intron | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | - | tig0033735:15565-15584 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | tig0033735:15587-15606 | None:intergenic | 30.0% |
| TGGTTTATGATAGAACACTA+TGG | + | tig0033735:15626-15645 | Msa1452220:intron | 30.0% | |
| ! | TAGCACTGAATACTACTAAA+AGG | + | tig0033735:15971-15990 | Msa1452220:intron | 30.0% |
| ! | GACAATCATATTTTTCTACC+CGG | + | tig0033735:16041-16060 | Msa1452220:intron | 30.0% |
| ! | ATTTTTCTACCCGGTATATA+TGG | + | tig0033735:16050-16069 | Msa1452220:intron | 30.0% |
| ! | TTTTTCTACCCGGTATATAT+GGG | + | tig0033735:16051-16070 | Msa1452220:intron | 30.0% |
| TGAATACGCATCTAATTGTA+AGG | - | tig0033735:16090-16109 | None:intergenic | 30.0% | |
| GAAAGATTCAATTAGTCATG+AGG | - | tig0033735:16127-16146 | None:intergenic | 30.0% | |
| AAGAAGTAGAACAGCAATAA+AGG | - | tig0033735:16157-16176 | None:intergenic | 30.0% | |
| ! | TTATTGCTGTTCTACTTCTT+TGG | + | tig0033735:16157-16176 | Msa1452220:intron | 30.0% |
| AATCAGTAAAAGGCAAAAGT+TGG | + | tig0033735:16281-16300 | Msa1452220:CDS | 30.0% | |
| ! | AACCTTTTCTTCTATTGTTC+CGG | - | tig0033735:16725-16744 | None:intergenic | 30.0% |
| ! | CAATTTGTTTACTTTCGATG+AGG | + | tig0033735:17051-17070 | Msa1452220:CDS | 30.0% |
| !!! | TATTAGAGAGTTTTTTCGTG+GGG | - | tig0033735:17347-17366 | None:intergenic | 30.0% |
| !!! | CTATTAGAGAGTTTTTTCGT+GGG | - | tig0033735:17348-17367 | None:intergenic | 30.0% |
| !!! | TCTATTAGAGAGTTTTTTCG+TGG | - | tig0033735:17349-17368 | None:intergenic | 30.0% |
| AACTGAGTAACTGTTTAAAC+TGG | - | tig0033735:17553-17572 | None:intergenic | 30.0% | |
| TTAAACAGTTACTCAGTTAC+AGG | + | tig0033735:17555-17574 | Msa1452220:intron | 30.0% | |
| TAAACAGTTACTCAGTTACA+GGG | + | tig0033735:17556-17575 | Msa1452220:intron | 30.0% | |
| !! | ATTTTGACCCCAAAATGTTA+AGG | + | tig0033735:17670-17689 | Msa1452220:intron | 30.0% |
| ! | TGCAAAGAATGATAACGAAT+GGG | + | tig0033735:17905-17924 | Msa1452220:intron | 30.0% |
| ATGTACTATTTCCATGAGAT+GGG | + | tig0033735:18270-18289 | Msa1452220:intron | 30.0% | |
| AAATGTATAATCCCATCTCA+TGG | - | tig0033735:18284-18303 | None:intergenic | 30.0% | |
| TGTAGTTGATTGAATCAACT+TGG | + | tig0033735:18355-18374 | Msa1452220:intron | 30.0% | |
| TAATGTTGATATTGATCGTC+TGG | + | tig0033735:18426-18445 | Msa1452220:intron | 30.0% | |
| GTCAGAGATTCATGAAAATA+TGG | + | tig0033735:18538-18557 | Msa1452220:CDS | 30.0% | |
| TCAATGATTAATAGCGAATG+TGG | + | tig0033735:18614-18633 | Msa1452220:CDS | 30.0% | |
| TTTGAAAACATCAGAAAAGC+AGG | + | tig0033735:18694-18713 | Msa1452220:CDS | 30.0% | |
| !!! | AGGTTGCTTTTGTATTTTGT+TGG | + | tig0033735:18714-18733 | Msa1452220:intron | 30.0% |
| !! | AGTTGTTTTACTCTTTTGAG+TGG | + | tig0033735:18742-18761 | Msa1452220:intron | 30.0% |
| !! | GTTGTTTTACTCTTTTGAGT+GGG | + | tig0033735:18743-18762 | Msa1452220:intron | 30.0% |
| TATCTCACCTCTTGATTTAA+AGG | + | tig0033735:18818-18837 | Msa1452220:intron | 30.0% | |
| GAAGAAGATTTAAGTAGTTG+GGG | + | tig0033735:18927-18946 | Msa1452220:CDS | 30.0% | |
| TGGTGACATTAAATGGAATA+TGG | - | tig0033735:19100-19119 | None:intergenic | 30.0% | |
| ! | AATTCCTTTTTCTGTAGCTT+GGG | - | tig0033735:19247-19266 | None:intergenic | 30.0% |
| ! | TAATTCCTTTTTCTGTAGCT+TGG | - | tig0033735:19248-19267 | None:intergenic | 30.0% |
| !! | TTCATTTACAAGAGAGTGTT+TGG | - | tig0033735:19455-19474 | None:intergenic | 30.0% |
| !!! | TCAACATGACATGCTTTTTT+CGG | - | tig0033735:19547-19566 | None:intergenic | 30.0% |
| ! | GTATTCACACTCATCTATTT+TGG | + | tig0033735:19624-19643 | Msa1452220:three_prime_UTR | 30.0% |
| TGACACTTCAACTTCTTCAT+CGG | - | tig0033735:9739-9758 | None:intergenic | 35.0% | |
| AATGTAGAAGCCCTAATCAA+AGG | + | tig0033735:9810-9829 | Msa1452220:CDS | 35.0% | |
| CGATAAGGTTACCTTTGATT+AGG | - | tig0033735:9824-9843 | None:intergenic | 35.0% | |
| ! | AAACGGTTTTCTGCAAATAG+CGG | - | tig0033735:9895-9914 | None:intergenic | 35.0% |
| TTATCGTTGTAAGCATCAGA+TGG | - | tig0033735:9924-9943 | None:intergenic | 35.0% | |
| TTCAAATCCAACTCAGTCAA+AGG | - | tig0033735:10041-10060 | None:intergenic | 35.0% | |
| TATTAGAGGATCAATTCCAG+GGG | - | tig0033735:10111-10130 | None:intergenic | 35.0% | |
| GTATTAGAGGATCAATTCCA+GGG | - | tig0033735:10112-10131 | None:intergenic | 35.0% | |
| AGTATTAGAGGATCAATTCC+AGG | - | tig0033735:10113-10132 | None:intergenic | 35.0% | |
| GAATTGATCCTCTAATACTC+TGG | + | tig0033735:10114-10133 | Msa1452220:CDS | 35.0% | |
| GATACACTGTAGCCAATAAA+AGG | - | tig0033735:10243-10262 | None:intergenic | 35.0% | |
| CATAGCAGTTGAGTGAATTA+GGG | - | tig0033735:10315-10334 | None:intergenic | 35.0% | |
| ACATAGCAGTTGAGTGAATT+AGG | - | tig0033735:10316-10335 | None:intergenic | 35.0% | |
| CTACTTATTTGATGCAGAGA+AGG | + | tig0033735:10412-10431 | Msa1452220:intron | 35.0% | |
| ACTTATTTGATGCAGAGAAG+GGG | + | tig0033735:10414-10433 | Msa1452220:intron | 35.0% | |
| !! | ATGCATTTTGGCAGATGATA+TGG | + | tig0033735:10492-10511 | Msa1452220:CDS | 35.0% |
| !! | TGCATTTTGGCAGATGATAT+GGG | + | tig0033735:10493-10512 | Msa1452220:CDS | 35.0% |
| CTTATTTGTCAAGGTTTCGA+TGG | + | tig0033735:10654-10673 | Msa1452220:CDS | 35.0% | |
| GGAAGCAGAAATTAAGAAGT+GGG | + | tig0033735:10734-10753 | Msa1452220:CDS | 35.0% | |
| ACAAGACAAGATGTTATCTC+CGG | + | tig0033735:10795-10814 | Msa1452220:CDS | 35.0% | |
| TTTAACCTGGAATTTGCCTT+GGG | - | tig0033735:10841-10860 | None:intergenic | 35.0% | |
| ATTTAACCTGGAATTTGCCT+TGG | - | tig0033735:10842-10861 | None:intergenic | 35.0% | |
| AAAAACAACTCCCGATTTAC+AGG | + | tig0033735:10907-10926 | Msa1452220:intron | 35.0% | |
| AAATATGCCTGTAAAGAGGA+AGG | - | tig0033735:11079-11098 | None:intergenic | 35.0% | |
| TCAGAAATATGCCTGTAAAG+AGG | - | tig0033735:11083-11102 | None:intergenic | 35.0% | |
| AGTCATTCACAAATACTTCC+TGG | + | tig0033735:11102-11121 | Msa1452220:intron | 35.0% | |
| TCACAAATACTTCCTGGATT+AGG | + | tig0033735:11108-11127 | Msa1452220:intron | 35.0% | |
| AGCAAAACTCTACGTTTACA+CGG | - | tig0033735:11148-11167 | None:intergenic | 35.0% | |
| CTTGGAAGAATTCTTTGCAA+TGG | + | tig0033735:11290-11309 | Msa1452220:CDS | 35.0% | |
| !! | ACATTTTCGACGTTACTTTG+AGG | + | tig0033735:11350-11369 | Msa1452220:CDS | 35.0% |
| !!! | TTCTGGAAGCTTTTTGAAGT+TGG | - | tig0033735:11554-11573 | None:intergenic | 35.0% |
| CGTTCTAGCATCATATATTC+TGG | - | tig0033735:11571-11590 | None:intergenic | 35.0% | |
| CATATTAGCAAGTCAACTTC+AGG | - | tig0033735:11923-11942 | None:intergenic | 35.0% | |
| GATTATCTAATGTATGGCGT+AGG | - | tig0033735:12160-12179 | None:intergenic | 35.0% | |
| TTCTCATGCAGATATCTTGA+GGG | - | tig0033735:12297-12316 | None:intergenic | 35.0% | |
| CTAATCTTATTCTTATCCCG+CGG | + | tig0033735:12369-12388 | Msa1452220:intron | 35.0% | |
| TTGTTAAAAGACACCACCAA+AGG | + | tig0033735:12720-12739 | Msa1452220:intron | 35.0% | |
| TGTTAAAAGACACCACCAAA+GGG | + | tig0033735:12721-12740 | Msa1452220:intron | 35.0% | |
| GGAAACAGATTTATCTATGC+AGG | - | tig0033735:13081-13100 | None:intergenic | 35.0% | |
| ! | ACTGAAGCAATCGAAGATTT+TGG | + | tig0033735:13134-13153 | Msa1452220:CDS | 35.0% |
| !! | GAAGATTTTGGCCTACATTA+CGG | + | tig0033735:13146-13165 | Msa1452220:CDS | 35.0% |
| !!! | CTTTTTTAGAGCCGTAATGT+AGG | - | tig0033735:13160-13179 | None:intergenic | 35.0% |
| !! | ATTGCTTTTGTCTATACGCT+TGG | + | tig0033735:13244-13263 | Msa1452220:intron | 35.0% |
| ! | AAGGATCATAAGTTGAGAGA+AGG | - | tig0033735:13397-13416 | None:intergenic | 35.0% |
| AACAACCAACCAGAAATGTA+AGG | - | tig0033735:13457-13476 | None:intergenic | 35.0% | |
| ACATATTTGGAGGGAAGAAT+CGG | - | tig0033735:13576-13595 | None:intergenic | 35.0% | |
| TTCCCTCCAAATATGTTATC+TGG | + | tig0033735:13580-13599 | Msa1452220:CDS | 35.0% | |
| GTCCAGATAACATATTTGGA+GGG | - | tig0033735:13585-13604 | None:intergenic | 35.0% | |
| CTCCAAATATGTTATCTGGA+CGG | + | tig0033735:13584-13603 | Msa1452220:CDS | 35.0% | |
| TACCGTCCAGATAACATATT+TGG | - | tig0033735:13589-13608 | None:intergenic | 35.0% | |
| GCCACAATTTAGTCATTCTA+AGG | + | tig0033735:13649-13668 | Msa1452220:intron | 35.0% | |
| CCCTTAGAATGACTAAATTG+TGG | - | tig0033735:13653-13672 | None:intergenic | 35.0% | |
| TCAGGTATATGGTAACAATC+TGG | + | tig0033735:13817-13836 | Msa1452220:intron | 35.0% | |
| ! | TCAACAGCTTTTCAATTTGG+GGG | - | tig0033735:14080-14099 | None:intergenic | 35.0% |
| ! | CCATCAACAGCTTTTCAATT+TGG | - | tig0033735:14083-14102 | None:intergenic | 35.0% |
| CCAAATTGAAAAGCTGTTGA+TGG | + | tig0033735:14080-14099 | Msa1452220:intron | 35.0% | |
| ! | ACGATACTGTTTTCGACAAT+AGG | + | tig0033735:14111-14130 | Msa1452220:intron | 35.0% |
| ! | TTGGCAAATTGGGTAGTTTT+GGG | - | tig0033735:14261-14280 | None:intergenic | 35.0% |
| ! | ATTGGCAAATTGGGTAGTTT+TGG | - | tig0033735:14262-14281 | None:intergenic | 35.0% |
| GGAAAAAGCAATTGGCAAAT+TGG | - | tig0033735:14272-14291 | None:intergenic | 35.0% | |
| CTTCTTAACATATACTGGTG+AGG | + | tig0033735:14435-14454 | Msa1452220:intron | 35.0% | |
| GGTTAGGATTGCCTATATTA+GGG | + | tig0033735:14706-14725 | Msa1452220:intron | 35.0% | |
| ! | ATCCTTGATAGCCCTAATAT+AGG | - | tig0033735:14720-14739 | None:intergenic | 35.0% |
| GCTATCAAGGATATGTTTGA+GGG | + | tig0033735:14728-14747 | Msa1452220:intron | 35.0% | |
| TGGTGCAATCCTATTGTTAT+GGG | - | tig0033735:14800-14819 | None:intergenic | 35.0% | |
| TTGGTGCAATCCTATTGTTA+TGG | - | tig0033735:14801-14820 | None:intergenic | 35.0% | |
| ATAACAATAGGATTGCACCA+AGG | + | tig0033735:14800-14819 | Msa1452220:intron | 35.0% | |
| TAACAATAGGATTGCACCAA+GGG | + | tig0033735:14801-14820 | Msa1452220:intron | 35.0% | |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | tig0033735:14896-14915 | None:intergenic | 35.0% |
| TAGAAGCAAGACGAAGTATA+TGG | + | tig0033735:15009-15028 | Msa1452220:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | tig0033735:15089-15108 | Msa1452220:intron | 35.0% | |
| TAAGCCATCATATTCAAGCT+GGG | + | tig0033735:15164-15183 | Msa1452220:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | tig0033735:15238-15257 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | tig0033735:15242-15261 | Msa1452220:intron | 35.0% | |
| AAGTAAGTGTAGTAGAGATG+AGG | + | tig0033735:15332-15351 | Msa1452220:intron | 35.0% | |
| GATTAGGAATGACACCATTA+GGG | + | tig0033735:15393-15412 | Msa1452220:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | tig0033735:15429-15448 | Msa1452220:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | tig0033735:15506-15525 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | tig0033735:15507-15526 | Msa1452220:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | tig0033735:15510-15529 | Msa1452220:intron | 35.0% | |
| AGTCAAGTTAAAAGAGGTAG+AGG | + | tig0033735:15535-15554 | Msa1452220:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | tig0033735:15594-15613 | Msa1452220:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATT+TGG | + | tig0033735:15606-15625 | Msa1452220:intron | 35.0% |
| ! | TGTTGTTGTTGTTGTGTTTG+TGG | + | tig0033735:15704-15723 | Msa1452220:intron | 35.0% |
| ! | GTTGTTGTTGTTGTGTTTGT+GGG | + | tig0033735:15705-15724 | Msa1452220:intron | 35.0% |
| ! | TTGTTGTTGTTGTGTTTGTG+GGG | + | tig0033735:15706-15725 | Msa1452220:intron | 35.0% |
| ! | GTAGATTCTGAGTTGAATCA+AGG | + | tig0033735:15749-15768 | Msa1452220:intron | 35.0% |
| CCTTCATGATTAATTGCATG+TGG | - | tig0033735:15777-15796 | None:intergenic | 35.0% | |
| CCACATGCAATTAATCATGA+AGG | + | tig0033735:15774-15793 | Msa1452220:intron | 35.0% | |
| ! | ATTTTCTCTTGACTGTTCTC+TGG | + | tig0033735:15907-15926 | Msa1452220:intron | 35.0% |
| TTTATCAGACAAAAGCTTGC+TGG | + | tig0033735:15931-15950 | Msa1452220:intron | 35.0% | |
| ! | TTATCAGACAAAAGCTTGCT+GGG | + | tig0033735:15932-15951 | Msa1452220:intron | 35.0% |
| AGATCAAGAGTCTGTTACAT+GGG | - | tig0033735:16201-16220 | None:intergenic | 35.0% | |
| AAGATCAAGAGTCTGTTACA+TGG | - | tig0033735:16202-16221 | None:intergenic | 35.0% | |
| ! | ATCTTTTTGCTCAATTGTGC+CGG | + | tig0033735:16217-16236 | Msa1452220:CDS | 35.0% |
| CAAAGGATAATCGCATGTAT+TGG | - | tig0033735:16393-16412 | None:intergenic | 35.0% | |
| ! | TGTTTTTCTCTTAAGCAGCA+AGG | + | tig0033735:16447-16466 | Msa1452220:CDS | 35.0% |
| GTTGTGGACTCAATTTGATT+GGG | + | tig0033735:16476-16495 | Msa1452220:CDS | 35.0% | |
| TTGTGGACTCAATTTGATTG+GGG | + | tig0033735:16477-16496 | Msa1452220:CDS | 35.0% | |
| TACCATTCCTAACCATTAAC+AGG | + | tig0033735:16636-16655 | Msa1452220:intron | 35.0% | |
| TGACAGAAATAGCTCAATGA+AGG | - | tig0033735:16814-16833 | None:intergenic | 35.0% | |
| GGCATATTATTCTCAACAAG+AGG | + | tig0033735:17250-17269 | Msa1452220:intron | 35.0% | |
| !!! | TTTTTGGTTGCAGTTACAAG+AGG | + | tig0033735:17447-17466 | Msa1452220:intron | 35.0% |
| ! | GTGCAAAGAATGATAACGAA+TGG | + | tig0033735:17904-17923 | Msa1452220:intron | 35.0% |
| ! | TATCATGAGCTCCTGATTTT+GGG | - | tig0033735:18031-18050 | None:intergenic | 35.0% |
| TAGTCTGTATTAGTTGTCAC+AGG | - | tig0033735:18163-18182 | None:intergenic | 35.0% | |
| GATGTACTATTTCCATGAGA+TGG | + | tig0033735:18269-18288 | Msa1452220:intron | 35.0% | |
| TTGATATTGATCGTCTGGTA+GGG | + | tig0033735:18431-18450 | Msa1452220:intron | 35.0% | |
| TGATAGACAGTCGTGAATAT+TGG | - | tig0033735:18469-18488 | None:intergenic | 35.0% | |
| CTTATTGCGTAAAGCAAAAG+GGG | - | tig0033735:19305-19324 | None:intergenic | 35.0% | |
| GCTTATTGCGTAAAGCAAAA+GGG | - | tig0033735:19306-19325 | None:intergenic | 35.0% | |
| AGCTTATTGCGTAAAGCAAA+AGG | - | tig0033735:19307-19326 | None:intergenic | 35.0% | |
| !! | AATACTTCATGTTTTTGCCC+AGG | + | tig0033735:19590-19609 | Msa1452220:exon | 35.0% |
| GAATACATCAAACCAAACCT+GGG | - | tig0033735:19610-19629 | None:intergenic | 35.0% | |
| TGAATACATCAAACCAAACC+TGG | - | tig0033735:19611-19630 | None:intergenic | 35.0% | |
| ACGATTGTCTCTTGACGATA+AGG | - | tig0033735:9839-9858 | None:intergenic | 40.0% | |
| CCATTGGTGGAATATACTCT+CGG | - | tig0033735:9867-9886 | None:intergenic | 40.0% | |
| ! | GCATCAGATGGTGGTTTAAA+CGG | - | tig0033735:9912-9931 | None:intergenic | 40.0% |
| GTAAACAAGATCTTGCTCGT+AGG | + | tig0033735:9946-9965 | Msa1452220:CDS | 40.0% | |
| GAATATCTCCGATCACAAAG+AGG | + | tig0033735:10058-10077 | Msa1452220:CDS | 40.0% | |
| ATTAGAGGATCAATTCCAGG+GGG | - | tig0033735:10110-10129 | None:intergenic | 40.0% | |
| ACGAACAAGCAAAGGATCAA+CGG | - | tig0033735:10177-10196 | None:intergenic | 40.0% | |
| ! | AAGGATTAGTACCTCTGATG+TGG | - | tig0033735:10209-10228 | None:intergenic | 40.0% |
| TTCATGTTTGATTGTGTCGC+TGG | + | tig0033735:10442-10461 | Msa1452220:CDS | 40.0% | |
| TGTGAGACACCCAATATCAA+TGG | + | tig0033735:10469-10488 | Msa1452220:CDS | 40.0% | |
| !! | GCATTTTGGCAGATGATATG+GGG | + | tig0033735:10494-10513 | Msa1452220:CDS | 40.0% |
| AATTTCTGCGCACTTACCTA+GGG | + | tig0033735:10563-10582 | Msa1452220:intron | 40.0% | |
| ATGATGGCCTTTCTAACCAT+AGG | - | tig0033735:10684-10703 | None:intergenic | 40.0% | |
| TACCAGTCTCGTTAGCAATT+GGG | + | tig0033735:10713-10732 | Msa1452220:CDS | 40.0% | |
| GGGAAGCAGAAATTAAGAAG+TGG | + | tig0033735:10733-10752 | Msa1452220:CDS | 40.0% | |
| GCAGAAATTAAGAAGTGGGT+TGG | + | tig0033735:10738-10757 | Msa1452220:CDS | 40.0% | |
| TGGTTTCACAAAGAGCAACA+AGG | - | tig0033735:10776-10795 | None:intergenic | 40.0% | |
| GGAGATAACATCTTGTCTTG+TGG | - | tig0033735:10796-10815 | None:intergenic | 40.0% | |
| CAAGACAAGATGTTATCTCC+GGG | + | tig0033735:10796-10815 | Msa1452220:CDS | 40.0% | |
| ! | AACAGTTTTACAAGTCCCCA+AGG | + | tig0033735:10822-10841 | Msa1452220:CDS | 40.0% |
| TTAACCTGGAATTTGCCTTG+GGG | - | tig0033735:10840-10859 | None:intergenic | 40.0% | |
| GAACGGTTGAGAATTTAACC+TGG | - | tig0033735:10854-10873 | None:intergenic | 40.0% | |
| TACGAGCTACTTACGTACTT+AGG | + | tig0033735:10879-10898 | Msa1452220:intron | 40.0% | |
| AACAACGAGCACCTGTAAAT+CGG | - | tig0033735:10921-10940 | None:intergenic | 40.0% | |
| !! | TCAGAGAAGTTTAGCTCTAG+TGG | + | tig0033735:10965-10984 | Msa1452220:CDS | 40.0% |
| ! | ATACTTCCTGGATTAGGCAT+TGG | + | tig0033735:11114-11133 | Msa1452220:intron | 40.0% |
| GCAAAACTCTACGTTTACAC+GGG | - | tig0033735:11147-11166 | None:intergenic | 40.0% | |
| !! | AAACGTAGAGTTTTGCTGTC+AGG | + | tig0033735:11151-11170 | Msa1452220:CDS | 40.0% |
| ACAACACAGACAGGTAATTG+TGG | - | tig0033735:11202-11221 | None:intergenic | 40.0% | |
| TTGTAACTCACAACACAGAC+AGG | - | tig0033735:11211-11230 | None:intergenic | 40.0% | |
| ACTAATCCTGGAATATTGGG+CGG | + | tig0033735:11321-11340 | Msa1452220:CDS | 40.0% | |
| CTTTATGATGCAGAGCAAGT+AGG | - | tig0033735:11632-11651 | None:intergenic | 40.0% | |
| CTACTTGCTCTGCATCATAA+AGG | + | tig0033735:11630-11649 | Msa1452220:intron | 40.0% | |
| GGTTCTCTTCCGCAAATTAT+TGG | - | tig0033735:11658-11677 | None:intergenic | 40.0% | |
| ACTGCAGAAGAGAAGAAACT+CGG | + | tig0033735:11685-11704 | Msa1452220:CDS | 40.0% | |
| ! | AGCTTTCTGAAAGTACACAG+TGG | - | tig0033735:11789-11808 | None:intergenic | 40.0% |
| ! | ACAACATCAAGGACTAGTGA+TGG | - | tig0033735:11822-11841 | None:intergenic | 40.0% |
| CAACTTCAGGAGAGTAAACA+CGG | - | tig0033735:11910-11929 | None:intergenic | 40.0% | |
| ATCAAATCACTTACCACCGA+AGG | + | tig0033735:11981-12000 | Msa1452220:CDS | 40.0% | |
| GTAAAATACACTACCTTCGG+TGG | - | tig0033735:11997-12016 | None:intergenic | 40.0% | |
| ATGCAGATATCTTGAGGGAT+TGG | - | tig0033735:12292-12311 | None:intergenic | 40.0% | |
| GTTCTCATGCAGATATCTTG+AGG | - | tig0033735:12298-12317 | None:intergenic | 40.0% | |
| CGCGGGATAAGAATAAGATT+AGG | - | tig0033735:12371-12390 | None:intergenic | 40.0% | |
| TATTGGATGAGAAACTTCCG+CGG | - | tig0033735:12389-12408 | None:intergenic | 40.0% | |
| TGACATCTGATTCCATGAGA+AGG | + | tig0033735:12518-12537 | Msa1452220:intron | 40.0% | |
| ATCTGATTCCATGAGAAGGT+AGG | + | tig0033735:12522-12541 | Msa1452220:intron | 40.0% | |
| ! | TTTTGTTACAAGCCACCCTT+TGG | - | tig0033735:12739-12758 | None:intergenic | 40.0% |
| TATCACCTGGACTGAATACA+AGG | + | tig0033735:12821-12840 | Msa1452220:intron | 40.0% | |
| ACCACAAAAGTAAAAGGCCA+CGG | - | tig0033735:12914-12933 | None:intergenic | 40.0% | |
| AAATCTGTTTCCTCAAACGC+AGG | + | tig0033735:13089-13108 | Msa1452220:intron | 40.0% | |
| TTCCTCAAACGCAGGTTAAA+CGG | + | tig0033735:13097-13116 | Msa1452220:intron | 40.0% | |
| AGTTCGTGAAGCTCTTCTAT+AGG | + | tig0033735:13318-13337 | Msa1452220:intron | 40.0% | |
| CCAGAAATGTAAGGAGAAGA+TGG | - | tig0033735:13448-13467 | None:intergenic | 40.0% | |
| CCATCTTCTCCTTACATTTC+TGG | + | tig0033735:13445-13464 | Msa1452220:intron | 40.0% | |
| !! | CTTCTCCTTACATTTCTGGT+TGG | + | tig0033735:13449-13468 | Msa1452220:intron | 40.0% |
| CGTCCAGATAACATATTTGG+AGG | - | tig0033735:13586-13605 | None:intergenic | 40.0% | |
| CTAAGGGGGATATTCTTTGT+AGG | + | tig0033735:13666-13685 | Msa1452220:intron | 40.0% | |
| TTCTTTGTAGGTCTGGATCA+TGG | + | tig0033735:13678-13697 | Msa1452220:intron | 40.0% | |
| TTCCGGTAAAATGCAAGTCT+TGG | + | tig0033735:13730-13749 | Msa1452220:CDS | 40.0% | |
| ! | TGCCAAGACTTGCATTTTAC+CGG | - | tig0033735:13735-13754 | None:intergenic | 40.0% |
| GTAAAATGCAAGTCTTGGCA+AGG | + | tig0033735:13735-13754 | Msa1452220:CDS | 40.0% | |
| CAATGCGATCATTTGTTCTC+TGG | - | tig0033735:13778-13797 | None:intergenic | 40.0% | |
| ! | CCTGAGTATAGTTTGAGACA+AGG | - | tig0033735:13802-13821 | None:intergenic | 40.0% |
| CCTTGTCTCAAACTATACTC+AGG | + | tig0033735:13799-13818 | Msa1452220:CDS | 40.0% | |
| ! | TGATATAAGGGTGTGATTGC+TGG | - | tig0033735:13862-13881 | None:intergenic | 40.0% |
| CAATGTGCTGTATCCATATC+AGG | + | tig0033735:13893-13912 | Msa1452220:intron | 40.0% | |
| ! | AAGTTCTAACCAGCCTGATA+TGG | - | tig0033735:13909-13928 | None:intergenic | 40.0% |
| ACTCCTCTTACTCTGCATTA+TGG | + | tig0033735:14168-14187 | Msa1452220:intron | 40.0% | |
| CTTCCATAATGCAGAGTAAG+AGG | - | tig0033735:14174-14193 | None:intergenic | 40.0% | |
| TCAGGTACTCAAATCAATGG+AGG | - | tig0033735:14233-14252 | None:intergenic | 40.0% | |
| !!! | AAATTGGGTAGTTTTGGGTG+GGG | - | tig0033735:14256-14275 | None:intergenic | 40.0% |
| !!! | CAAATTGGGTAGTTTTGGGT+GGG | - | tig0033735:14257-14276 | None:intergenic | 40.0% |
| GAGGATGGAAGGAGAAAATT+AGG | - | tig0033735:14293-14312 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+CGG | - | tig0033735:14671-14690 | None:intergenic | 40.0% | |
| GGGTTAGGATTGCCTATATT+AGG | + | tig0033735:14705-14724 | Msa1452220:intron | 40.0% | |
| TGCCTATATTAGGGCTATCA+AGG | + | tig0033735:14715-14734 | Msa1452220:intron | 40.0% | |
| GGCTATCAAGGATATGTTTG+AGG | + | tig0033735:14727-14746 | Msa1452220:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | tig0033735:15124-15143 | Msa1452220:intron | 40.0% | |
| !! | TTCGCCGTCATTTTGTACTA+TGG | - | tig0033735:15131-15150 | None:intergenic | 40.0% |
| GTAAGCCATCATATTCAAGC+TGG | + | tig0033735:15163-15182 | Msa1452220:intron | 40.0% | |
| ! | AGAGTACCACTTAAGCTGAA+AGG | + | tig0033735:15229-15248 | Msa1452220:intron | 40.0% |
| AGACTCGACATGATAGGATT+AGG | + | tig0033735:15377-15396 | Msa1452220:intron | 40.0% | |
| GGATTAGGAATGACACCATT+AGG | + | tig0033735:15392-15411 | Msa1452220:intron | 40.0% | |
| GAGGAGAGTCAAGTTAAAAG+AGG | + | tig0033735:15529-15548 | Msa1452220:intron | 40.0% | |
| AAAGAGGTAGAGGAAAACCT+AGG | + | tig0033735:15545-15564 | Msa1452220:intron | 40.0% | |
| ATCACAGCTACAACCTACAA+TGG | + | tig0033735:15811-15830 | Msa1452220:intron | 40.0% | |
| AGCTTGAACCCATATATACC+GGG | - | tig0033735:16062-16081 | None:intergenic | 40.0% | |
| GAGCTTGAACCCATATATAC+CGG | - | tig0033735:16063-16082 | None:intergenic | 40.0% | |
| ! | TCTTTTTGCTCAATTGTGCC+GGG | + | tig0033735:16218-16237 | Msa1452220:CDS | 40.0% |
| GCGCTACATCAATCAGTAAA+AGG | + | tig0033735:16271-16290 | Msa1452220:CDS | 40.0% | |
| GGTTGTGGACTCAATTTGAT+TGG | + | tig0033735:16475-16494 | Msa1452220:CDS | 40.0% | |
| !! | TCGTCTTGTTTGATCCTGAT+TGG | + | tig0033735:16509-16528 | Msa1452220:CDS | 40.0% |
| ! | TCATTTGCTGGATTCCAATC+AGG | - | tig0033735:16526-16545 | None:intergenic | 40.0% |
| TGCCGGAACAATAGAAGAAA+AGG | + | tig0033735:16720-16739 | Msa1452220:CDS | 40.0% | |
| ! | GCAGCATTAACTTGAACACA+GGG | - | tig0033735:16949-16968 | None:intergenic | 40.0% |
| GCCATATTATTCTCAACACG+AGG | + | tig0033735:17187-17206 | Msa1452220:intron | 40.0% | |
| GCCTCGTGTTGAGAATAATA+TGG | - | tig0033735:17191-17210 | None:intergenic | 40.0% | |
| CGACAATGGAGAACAAATGA+CGG | + | tig0033735:17310-17329 | Msa1452220:intron | 40.0% | |
| GACAATGGAGAACAAATGAC+GGG | + | tig0033735:17311-17330 | Msa1452220:intron | 40.0% | |
| AATCTAGTGCAGAACCTCTA+TGG | + | tig0033735:17584-17603 | Msa1452220:intron | 40.0% | |
| GATCATTGTGATCACCATAG+AGG | - | tig0033735:17601-17620 | None:intergenic | 40.0% | |
| !! | TTTGGGGTCAGTTTTCTCAT+CGG | - | tig0033735:17703-17722 | None:intergenic | 40.0% |
| ! | AACCAAGAAGCATGTAACCA+GGG | - | tig0033735:17802-17821 | None:intergenic | 40.0% |
| AAAAATCTGGGTAAGGTGGT+CGG | + | tig0033735:17842-17861 | Msa1452220:intron | 40.0% | |
| ACGACCTACAGGAAACAAAT+GGG | + | tig0033735:17946-17965 | Msa1452220:intron | 40.0% | |
| ! | ATCATGAGCTCCTGATTTTG+GGG | - | tig0033735:18030-18049 | None:intergenic | 40.0% |
| ! | GTATCATGAGCTCCTGATTT+TGG | - | tig0033735:18032-18051 | None:intergenic | 40.0% |
| TCCAGCCCATGTATTAGTAT+TGG | - | tig0033735:18132-18151 | None:intergenic | 40.0% | |
| ACTAACATCAGATAGGGATC+TGG | + | tig0033735:18240-18259 | Msa1452220:intron | 40.0% | |
| GTTGATATTGATCGTCTGGT+AGG | + | tig0033735:18430-18449 | Msa1452220:intron | 40.0% | |
| AGTCGTTGCCAAAACAATGA+TGG | + | tig0033735:18566-18585 | Msa1452220:CDS | 40.0% | |
| GTCGTTGCCAAAACAATGAT+GGG | + | tig0033735:18567-18586 | Msa1452220:CDS | 40.0% | |
| GATGATGAAACCGCTGATAT+AGG | + | tig0033735:18638-18657 | Msa1452220:CDS | 40.0% | |
| AGCAAATCCACCTATATCAG+CGG | - | tig0033735:18651-18670 | None:intergenic | 40.0% | |
| !! | GTTTTACTCTTTTGAGTGGG+AGG | + | tig0033735:18746-18765 | Msa1452220:intron | 40.0% |
| AGATAGACAGGAAAGCTAGT+AGG | - | tig0033735:18803-18822 | None:intergenic | 40.0% | |
| AATCAAGAGGTGAGATAGAC+AGG | - | tig0033735:18815-18834 | None:intergenic | 40.0% | |
| ATTAAAAAAGGGAAGGGGGT+GGG | - | tig0033735:19047-19066 | None:intergenic | 40.0% | |
| AATTAAAAAAGGGAAGGGGG+TGG | - | tig0033735:19048-19067 | None:intergenic | 40.0% | |
| ! | GTCTTCACAAACCAAGTTGA+TGG | + | tig0033735:19193-19212 | Msa1452220:CDS | 40.0% |
| !! | AAACCAAGTTGATGGAAAGC+TGG | + | tig0033735:19201-19220 | Msa1452220:CDS | 40.0% |
| TTTCTGTAGCTTGGGACTTA+TGG | - | tig0033735:19239-19258 | None:intergenic | 40.0% | |
| AAGTCCCAAGCTACAGAAAA+AGG | + | tig0033735:19240-19259 | Msa1452220:CDS | 40.0% | |
| ATATTGGATGCAGAACGTAG+TGG | - | tig0033735:19334-19353 | None:intergenic | 40.0% | |
| GCATGACACATTGGCAATAT+TGG | - | tig0033735:19350-19369 | None:intergenic | 40.0% | |
| GGTGTTTAATGCTACACTCA+TGG | - | tig0033735:19434-19453 | None:intergenic | 40.0% | |
| ! | GGGTATGATCTTTTCTGTCT+TGG | - | tig0033735:19481-19500 | None:intergenic | 40.0% |
| !! | TTCATGTTTTTGCCCAGGTT+TGG | + | tig0033735:19595-19614 | Msa1452220:three_prime_UTR | 40.0% |
| ! | CCGAGAGTATATTCCACCAA+TGG | + | tig0033735:9864-9883 | Msa1452220:CDS | 45.0% |
| TCGTTGTAAGCATCAGATGG+TGG | - | tig0033735:9921-9940 | None:intergenic | 45.0% | |
| TCGCAAAAGGTTTGTCCCAT+GGG | + | tig0033735:9977-9996 | Msa1452220:CDS | 45.0% | |
| GGTGGGAATAGAAATAGGAG+TGG | - | tig0033735:10009-10028 | None:intergenic | 45.0% | |
| ATCCAACTCAGTCAAAGGTG+TGG | - | tig0033735:10036-10055 | None:intergenic | 45.0% | |
| TATCTCCGATCACAAAGAGG+AGG | + | tig0033735:10061-10080 | Msa1452220:CDS | 45.0% | |
| ! | AGAGGTTGCCAGAGTATTAG+AGG | - | tig0033735:10125-10144 | None:intergenic | 45.0% |
| CGAAGGAAACGAACAAGCAA+AGG | - | tig0033735:10185-10204 | None:intergenic | 45.0% | |
| CAACTGCTATGTAGTTGCAG+AGG | + | tig0033735:10324-10343 | Msa1452220:intron | 45.0% | |
| ! | TTTTGGCAGATGATATGGGG+TGG | + | tig0033735:10497-10516 | Msa1452220:CDS | 45.0% |
| TTTGGCAGATGATATGGGGT+GGG | + | tig0033735:10498-10517 | Msa1452220:CDS | 45.0% | |
| CAATTTCTGCGCACTTACCT+AGG | + | tig0033735:10562-10581 | Msa1452220:intron | 45.0% | |
| TGGGAAGCCTATGGTTAGAA+AGG | + | tig0033735:10674-10693 | Msa1452220:CDS | 45.0% | |
| CAATTGCTAACGAGACTGGT+AGG | - | tig0033735:10714-10733 | None:intergenic | 45.0% | |
| CTACCAGTCTCGTTAGCAAT+TGG | + | tig0033735:10712-10731 | Msa1452220:CDS | 45.0% | |
| TTCCCAATTGCTAACGAGAC+TGG | - | tig0033735:10718-10737 | None:intergenic | 45.0% | |
| ACAACGAGCACCTGTAAATC+GGG | - | tig0033735:10920-10939 | None:intergenic | 45.0% | |
| CTTCCAAGTCATTCTGCAAG+TGG | - | tig0033735:11278-11297 | None:intergenic | 45.0% | |
| GGAATCTAATTCACACGCTC+AGG | - | tig0033735:11768-11787 | None:intergenic | 45.0% | |
| TTGTAACCCTGCTGGTAAAC+TGG | + | tig0033735:11838-11857 | Msa1452220:intron | 45.0% | |
| ATTGGATGAGAAACTTCCGC+GGG | - | tig0033735:12388-12407 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | tig0033735:12724-12743 | Msa1452220:intron | 45.0% | |
| AAGGACCTTGTATTCAGTCC+AGG | - | tig0033735:12829-12848 | None:intergenic | 45.0% | |
| TCCTCTTAATCTCGTAACCG+TGG | + | tig0033735:12894-12913 | Msa1452220:intron | 45.0% | |
| !! | ACCGTGGCCTTTTACTTTTG+TGG | + | tig0033735:12910-12929 | Msa1452220:intron | 45.0% |
| TCCTCAAACGCAGGTTAAAC+GGG | + | tig0033735:13098-13117 | Msa1452220:intron | 45.0% | |
| CCTCAAAACCTGAAGTTCCT+GGG | - | tig0033735:13546-13565 | None:intergenic | 45.0% | |
| TCCTCAAAACCTGAAGTTCC+TGG | - | tig0033735:13547-13566 | None:intergenic | 45.0% | |
| GGGGATATTCTTTGTAGGTC+TGG | + | tig0033735:13671-13690 | Msa1452220:intron | 45.0% | |
| AATGCGATCTAGATTCACCC+AGG | - | tig0033735:14040-14059 | None:intergenic | 45.0% | |
| CCATTTGCATCTCTGCACTT+TGG | - | tig0033735:14198-14217 | None:intergenic | 45.0% | |
| CCAAAGTGCAGAGATGCAAA+TGG | + | tig0033735:14195-14214 | Msa1452220:intron | 45.0% | |
| GGGTCAGGTACTCAAATCAA+TGG | - | tig0033735:14236-14255 | None:intergenic | 45.0% | |
| !!! | GCAAATTGGGTAGTTTTGGG+TGG | - | tig0033735:14258-14277 | None:intergenic | 45.0% |
| TTGAAAAGAAGCGGCACACT+TGG | + | tig0033735:14391-14410 | Msa1452220:intron | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | tig0033735:14673-14692 | Msa1452220:intron | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | tig0033735:14911-14930 | Msa1452220:intron | 45.0% |
| ! | TAGTCTTGCTTGGTGAGTTG+AGG | + | tig0033735:14921-14940 | Msa1452220:intron | 45.0% |
| ! | AGTCTTGCTTGGTGAGTTGA+GGG | + | tig0033735:14922-14941 | Msa1452220:intron | 45.0% |
| GAGTTGAGGGAGGAATTGAA+CGG | + | tig0033735:14935-14954 | Msa1452220:intron | 45.0% | |
| AGTTGAGGGAGGAATTGAAC+GGG | + | tig0033735:14936-14955 | Msa1452220:intron | 45.0% | |
| ! | AGGCAAGCCTTAGAAGCATA+TGG | + | tig0033735:14974-14993 | Msa1452220:intron | 45.0% |
| GCGGAAACCATATGCTTCTA+AGG | - | tig0033735:14984-15003 | None:intergenic | 45.0% | |
| TCGTCTTGCTTCTACTCAAG+CGG | - | tig0033735:15003-15022 | None:intergenic | 45.0% | |
| TGGAATGTAACTTCAGCGGA+AGG | + | tig0033735:15029-15048 | Msa1452220:intron | 45.0% | |
| AAGGAGAAGTAGGTCTACCT+CGG | + | tig0033735:15048-15067 | Msa1452220:intron | 45.0% | |
| ACCACCCAGCTTGAATATGA+TGG | - | tig0033735:15171-15190 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | tig0033735:15176-15195 | Msa1452220:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | tig0033735:15190-15209 | Msa1452220:intron | 45.0% | |
| TGAAATGGAGAAGAGCCTCA+GGG | + | tig0033735:15191-15210 | Msa1452220:intron | 45.0% | |
| CTATCGGACAACAATCAGAC+CGG | + | tig0033735:15258-15277 | Msa1452220:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | tig0033735:15284-15303 | Msa1452220:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | tig0033735:15285-15304 | Msa1452220:intron | 45.0% |
| GTGGTAAGACTCGACATGAT+AGG | + | tig0033735:15371-15390 | Msa1452220:intron | 45.0% | |
| TCTTCTTACCACGGCATCTA+CGG | - | tig0033735:15497-15516 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0033735:15675-15694 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0033735:15676-15695 | None:intergenic | 45.0% |
| TCAAACTTGGGCTCCATTGT+AGG | - | tig0033735:15827-15846 | None:intergenic | 45.0% | |
| !! | AACGAAAGTACCCTCACTTG+AGG | + | tig0033735:16241-16260 | Msa1452220:CDS | 45.0% |
| ! | AACGACCCGTCTAAGGTAAA+TGG | + | tig0033735:16315-16334 | Msa1452220:intron | 45.0% |
| ! | ACGACCCGTCTAAGGTAAAT+GGG | + | tig0033735:16316-16335 | Msa1452220:intron | 45.0% |
| GTGACCCATTTACCTTAGAC+GGG | - | tig0033735:16323-16342 | None:intergenic | 45.0% | |
| GGTGACCCATTTACCTTAGA+CGG | - | tig0033735:16324-16343 | None:intergenic | 45.0% | |
| TTTCTCTTAAGCAGCAAGGC+TGG | + | tig0033735:16451-16470 | Msa1452220:CDS | 45.0% | |
| AGTTAGAGAGAGAGAGAGAG+AGG | - | tig0033735:16602-16621 | None:intergenic | 45.0% | |
| GGCCTGTTAATGGTTAGGAA+TGG | - | tig0033735:16641-16660 | None:intergenic | 45.0% | |
| AGCGTCAGATGGCAAAAGAA+GGG | + | tig0033735:16865-16884 | Msa1452220:CDS | 45.0% | |
| GCTGCAAAAGGTCATTCAGA+GGG | + | tig0033735:16887-16906 | Msa1452220:CDS | 45.0% | |
| ! | GGCAGCATTAACTTGAACAC+AGG | - | tig0033735:16950-16969 | None:intergenic | 45.0% |
| AACCAGCGAAACAACGACAA+TGG | + | tig0033735:17296-17315 | Msa1452220:intron | 45.0% | |
| ACAGAGAAGCAAAAGCTCTC+TGG | - | tig0033735:17391-17410 | None:intergenic | 45.0% | |
| AGTCACACTCTCTAGATGAC+TGG | + | tig0033735:17521-17540 | Msa1452220:intron | 45.0% | |
| ! | CACCTCGCCTTAACATTTTG+GGG | - | tig0033735:17680-17699 | None:intergenic | 45.0% |
| ! | GCACCTCGCCTTAACATTTT+GGG | - | tig0033735:17681-17700 | None:intergenic | 45.0% |
| ! | ACACACAGCTCTCGATTTTG+GGG | - | tig0033735:17719-17738 | None:intergenic | 45.0% |
| ! | CACACACAGCTCTCGATTTT+GGG | - | tig0033735:17720-17739 | None:intergenic | 45.0% |
| ! | TCACACACAGCTCTCGATTT+TGG | - | tig0033735:17721-17740 | None:intergenic | 45.0% |
| ATGTAACCAGGGACATCAGA+CGG | - | tig0033735:17791-17810 | None:intergenic | 45.0% | |
| ! | GAACCAAGAAGCATGTAACC+AGG | - | tig0033735:17803-17822 | None:intergenic | 45.0% |
| GGTTACATGCTTCTTGGTTC+CGG | + | tig0033735:17803-17822 | Msa1452220:intron | 45.0% | |
| !!! | GATTTTTTCCGCCCAGAGAT+TGG | - | tig0033735:17829-17848 | None:intergenic | 45.0% |
| ATCTCTGGGCGGAAAAAATC+TGG | + | tig0033735:17829-17848 | Msa1452220:intron | 45.0% | |
| TCTCTGGGCGGAAAAAATCT+GGG | + | tig0033735:17830-17849 | Msa1452220:intron | 45.0% | |
| CGGAAAAAATCTGGGTAAGG+TGG | + | tig0033735:17838-17857 | Msa1452220:intron | 45.0% | |
| !! | GAATGGGAACTTGTTGCTGT+GGG | + | tig0033735:17921-17940 | Msa1452220:intron | 45.0% |
| GACGACCTACAGGAAACAAA+TGG | + | tig0033735:17945-17964 | Msa1452220:intron | 45.0% | |
| AGTGCCCATTTGTTTCCTGT+AGG | - | tig0033735:17953-17972 | None:intergenic | 45.0% | |
| AAATGGGCACTAAAGCCCAA+AGG | + | tig0033735:17962-17981 | Msa1452220:intron | 45.0% | |
| AATGGGCACTAAAGCCCAAA+GGG | + | tig0033735:17963-17982 | Msa1452220:intron | 45.0% | |
| ! | TCATGAGCTCCTGATTTTGG+GGG | - | tig0033735:18029-18048 | None:intergenic | 45.0% |
| GCCAATACTAATACATGGGC+TGG | + | tig0033735:18128-18147 | Msa1452220:intron | 45.0% | |
| GATCGTCTGGTAGGGTTAAA+AGG | + | tig0033735:18439-18458 | Msa1452220:intron | 45.0% | |
| CATTAGACTGAGAGAGTGAG+AGG | - | tig0033735:18495-18514 | None:intergenic | 45.0% | |
| ! | CTTGCAGCCCATCATTGTTT+TGG | - | tig0033735:18577-18596 | None:intergenic | 45.0% |
| GATGAAACCGCTGATATAGG+TGG | + | tig0033735:18641-18660 | Msa1452220:CDS | 45.0% | |
| TAGACAGGAAAGCTAGTAGG+TGG | - | tig0033735:18800-18819 | None:intergenic | 45.0% | |
| GTACCAGCTTTCCATCAACT+TGG | - | tig0033735:19207-19226 | None:intergenic | 45.0% | |
| !! | AGTTGATGGAAAGCTGGTAC+CGG | + | tig0033735:19207-19226 | Msa1452220:CDS | 45.0% |
| TTGGGACTTATGGAGTCAAC+CGG | - | tig0033735:19229-19248 | None:intergenic | 45.0% | |
| ATTGCGTAAAGCAAAAGGGG+TGG | - | tig0033735:19302-19321 | None:intergenic | 45.0% | |
| CGAAGATGAGCATGACACAT+TGG | - | tig0033735:19359-19378 | None:intergenic | 45.0% | |
| CATGCTCATCTTCGATTGCT+TGG | + | tig0033735:19365-19384 | Msa1452220:CDS | 45.0% | |
| TTCGATTGCTTGGACGAAGA+AGG | + | tig0033735:19375-19394 | Msa1452220:CDS | 45.0% | |
| !! | TACCCTGCTGATTCCAATGA+TGG | + | tig0033735:19496-19515 | Msa1452220:CDS | 45.0% |
| TACAAGAGAGTGGCCATCAT+TGG | - | tig0033735:19512-19531 | None:intergenic | 45.0% | |
| !!! | TATTTTATTTTAAATGTATA+TGG | + | tig0033735:11246-11265 | Msa1452220:intron | 5.0% |
| !! | TTCTATAAATAATTAAAAAA+GGG | - | tig0033735:19058-19077 | None:intergenic | 5.0% |
| !! | TTTCTATAAATAATTAAAAA+AGG | - | tig0033735:19059-19078 | None:intergenic | 5.0% |
| GTAGGCTTTCTGCTCGCAAA+AGG | + | tig0033735:9964-9983 | Msa1452220:CDS | 50.0% | |
| CTCGCAAAAGGTTTGTCCCA+TGG | + | tig0033735:9976-9995 | Msa1452220:CDS | 50.0% | |
| CGCAAAAGGTTTGTCCCATG+GGG | + | tig0033735:9978-9997 | Msa1452220:CDS | 50.0% | |
| TAGGAGTGGTAGAACCCCAT+GGG | - | tig0033735:9995-10014 | None:intergenic | 50.0% | |
| ATAGGAGTGGTAGAACCCCA+TGG | - | tig0033735:9996-10015 | None:intergenic | 50.0% | |
| GCGGAGGTGGGAATAGAAAT+AGG | - | tig0033735:10014-10033 | None:intergenic | 50.0% | |
| ! | CAACTCAGTCAAAGGTGTGG+CGG | - | tig0033735:10033-10052 | None:intergenic | 50.0% |
| CACAGCCTCCTCTTTGTGAT+CGG | - | tig0033735:10069-10088 | None:intergenic | 50.0% | |
| GTTTCCTTCGTCCACATCAG+AGG | + | tig0033735:10195-10214 | Msa1452220:intron | 50.0% | |
| AGTACCTCTGATGTGGACGA+AGG | - | tig0033735:10202-10221 | None:intergenic | 50.0% | |
| TGCTATGTAGTTGCAGAGGC+AGG | + | tig0033735:10328-10347 | Msa1452220:intron | 50.0% | |
| AACTGTGCAGCGAGGATCAA+AGG | - | tig0033735:10596-10615 | None:intergenic | 50.0% | |
| TTGATCCTCGCTGCACAGTT+TGG | + | tig0033735:10596-10615 | Msa1452220:intron | 50.0% | |
| TGATCCTCGCTGCACAGTTT+GGG | + | tig0033735:10597-10616 | Msa1452220:intron | 50.0% | |
| AGGTTTCGATGGGAAGCCTA+TGG | + | tig0033735:10665-10684 | Msa1452220:CDS | 50.0% | |
| ACTGGTAGGAGTGACGATGA+TGG | - | tig0033735:10700-10719 | None:intergenic | 50.0% | |
| AAGTCCCCAAGGCAAATTCC+AGG | + | tig0033735:10833-10852 | Msa1452220:CDS | 50.0% | |
| GTCACAGATGAGGAGATCAC+AGG | - | tig0033735:10993-11012 | None:intergenic | 50.0% | |
| TGATCTCCTCATCTGTGACG+AGG | + | tig0033735:10994-11013 | Msa1452220:CDS | 50.0% | |
| CCTGTAAAGAGGAAGGAGAG+AGG | - | tig0033735:11072-11091 | None:intergenic | 50.0% | |
| CCTCTCTCCTTCCTCTTTAC+AGG | + | tig0033735:11069-11088 | Msa1452220:intron | 50.0% | |
| GGATAGATCCTCACCTGCAA+AGG | - | tig0033735:11181-11200 | None:intergenic | 50.0% | |
| !! | GTGCCACTTGCAGAATGACT+TGG | + | tig0033735:11272-11291 | Msa1452220:intron | 50.0% |
| TTCTCTTCTGCAGTAGCAGC+AGG | - | tig0033735:11679-11698 | None:intergenic | 50.0% | |
| CCAGCAGGGTTACAACATCA+AGG | - | tig0033735:11833-11852 | None:intergenic | 50.0% | |
| CCTTGATGTTGTAACCCTGC+TGG | + | tig0033735:11830-11849 | Msa1452220:intron | 50.0% | |
| ACCCTGCTGGTAAACTGGAA+AGG | + | tig0033735:11843-11862 | Msa1452220:intron | 50.0% | |
| CCCTTTCCAGTTTACCAGCA+GGG | - | tig0033735:11847-11866 | None:intergenic | 50.0% | |
| CCCTGCTGGTAAACTGGAAA+GGG | + | tig0033735:11844-11863 | Msa1452220:intron | 50.0% | |
| ACCCTTTCCAGTTTACCAGC+AGG | - | tig0033735:11848-11867 | None:intergenic | 50.0% | |
| TCTTGAGGGATTGGACAGCT+TGG | - | tig0033735:12283-12302 | None:intergenic | 50.0% | |
| GGCTGAAACCTACCTTCTCA+TGG | - | tig0033735:12533-12552 | None:intergenic | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | - | tig0033735:12736-12755 | None:intergenic | 50.0% | |
| GCCACGGTTACGAGATTAAG+AGG | - | tig0033735:12898-12917 | None:intergenic | 50.0% | |
| !! | CCCAGGAACTTCAGGTTTTG+AGG | + | tig0033735:13543-13562 | Msa1452220:CDS | 50.0% |
| TGTAGGTCTGGATCATGGAC+AGG | + | tig0033735:13683-13702 | Msa1452220:intron | 50.0% | |
| GTGCTGTATCCATATCAGGC+TGG | + | tig0033735:13897-13916 | Msa1452220:intron | 50.0% | |
| AGTTAGCACTCTGACTGCTG+TGG | - | tig0033735:14318-14337 | None:intergenic | 50.0% | |
| ! | GGGTTCCGAGAGAGATTTTG+TGG | + | tig0033735:14663-14682 | Msa1452220:intron | 50.0% |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | tig0033735:14683-14702 | Msa1452220:intron | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | tig0033735:14684-14703 | Msa1452220:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | tig0033735:14685-14704 | Msa1452220:intron | 50.0% | |
| CCTAACCCCTTTCTTCTCCA+GGG | - | tig0033735:14693-14712 | None:intergenic | 50.0% | |
| TCCTAACCCCTTTCTTCTCC+AGG | - | tig0033735:14694-14713 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | tig0033735:14820-14839 | None:intergenic | 50.0% | |
| ACTTCAGCGGAAGGAGAAGT+AGG | + | tig0033735:15038-15057 | Msa1452220:intron | 50.0% | |
| TCTACCTCGGAGGTGAAAGT+TGG | + | tig0033735:15061-15080 | Msa1452220:intron | 50.0% | |
| ATCTCCAACTTTCACCTCCG+AGG | - | tig0033735:15068-15087 | None:intergenic | 50.0% | |
| GCCATCATATTCAAGCTGGG+TGG | + | tig0033735:15167-15186 | Msa1452220:intron | 50.0% | |
| GAAATGGAGAAGAGCCTCAG+GGG | + | tig0033735:15192-15211 | Msa1452220:intron | 50.0% | |
| CTTATCGCACAAAACCCCTG+AGG | - | tig0033735:15209-15228 | None:intergenic | 50.0% | |
| ATCAGACCGGCGATGTTGTA+TGG | + | tig0033735:15271-15290 | Msa1452220:intron | 50.0% | |
| ACCGGCGATGTTGTATGGTA+CGG | + | tig0033735:15276-15295 | Msa1452220:intron | 50.0% | |
| TCCGTACCATACAACATCGC+CGG | - | tig0033735:15280-15299 | None:intergenic | 50.0% | |
| TAGAGATGAGGATGTTGCGC+TGG | + | tig0033735:15344-15363 | Msa1452220:intron | 50.0% | |
| TGACACCATTAGGGAGAGAG+TGG | + | tig0033735:15402-15421 | Msa1452220:intron | 50.0% | |
| GACACCATTAGGGAGAGAGT+GGG | + | tig0033735:15403-15422 | Msa1452220:intron | 50.0% | |
| ACACCATTAGGGAGAGAGTG+GGG | + | tig0033735:15404-15423 | Msa1452220:intron | 50.0% | |
| CTTCTTACCACGGCATCTAC+GGG | - | tig0033735:15496-15515 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | tig0033735:15671-15690 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0033735:15677-15696 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | tig0033735:15674-15693 | Msa1452220:intron | 50.0% | |
| !! | AGTGAGGGTACTTTCGTTCC+CGG | - | tig0033735:16239-16258 | None:intergenic | 50.0% |
| TACCCTCACTTGAGGCTTGA+TGG | + | tig0033735:16249-16268 | Msa1452220:CDS | 50.0% | |
| ATCCCTCCAAACTCTTGCTG+CGG | - | tig0033735:16662-16681 | None:intergenic | 50.0% | |
| ! | CTTCTTTTGCCATCTGACGC+TGG | - | tig0033735:16866-16885 | None:intergenic | 50.0% |
| CAGCGTCAGATGGCAAAAGA+AGG | + | tig0033735:16864-16883 | Msa1452220:CDS | 50.0% | |
| GGCAAAAGAAGGGCTGCAAA+AGG | + | tig0033735:16875-16894 | Msa1452220:CDS | 50.0% | |
| GGCTGCAAAAGGTCATTCAG+AGG | + | tig0033735:16886-16905 | Msa1452220:CDS | 50.0% | |
| GGGTAACTTTCTCTCGACAG+AGG | + | tig0033735:17021-17040 | Msa1452220:intron | 50.0% | |
| ! | TGTCGTTGTTTCGCTGGTTG+TGG | - | tig0033735:17295-17314 | None:intergenic | 50.0% |
| ! | CTCCATTGTCGTTGTTTCGC+TGG | - | tig0033735:17301-17320 | None:intergenic | 50.0% |
| AGAGTGTGACTGACACGTGT+CGG | - | tig0033735:17512-17531 | None:intergenic | 50.0% | |
| GACCCCAAAATGTTAAGGCG+AGG | + | tig0033735:17675-17694 | Msa1452220:intron | 50.0% | |
| ! | GGCACCTCGCCTTAACATTT+TGG | - | tig0033735:17682-17701 | None:intergenic | 50.0% |
| TGTAACCAGGGACATCAGAC+GGG | - | tig0033735:17790-17809 | None:intergenic | 50.0% | |
| GTCCCTGGTTACATGCTTCT+TGG | + | tig0033735:17797-17816 | Msa1452220:intron | 50.0% | |
| GGGCGGAAAAAATCTGGGTA+AGG | + | tig0033735:17835-17854 | Msa1452220:intron | 50.0% | |
| !! | CGAATGGGAACTTGTTGCTG+TGG | + | tig0033735:17920-17939 | Msa1452220:intron | 50.0% |
| ! | ACGCGGCTAGGGTTTTTACT+CGG | + | tig0033735:17995-18014 | Msa1452220:intron | 50.0% |
| GAAGCAAGACCCCCAAAATC+AGG | + | tig0033735:18017-18036 | Msa1452220:intron | 50.0% | |
| !! | GGTGGATTTGCTGAGATTGC+AGG | + | tig0033735:18659-18678 | Msa1452220:CDS | 50.0% |
| CTGAGATTGCAGGCTGCTTA+GGG | + | tig0033735:18669-18688 | Msa1452220:CDS | 50.0% | |
| TTCCCAACCTCTGTACCAGA+CGG | + | tig0033735:18960-18979 | Msa1452220:CDS | 50.0% | |
| ! | TGGATTTTCGCTCGACGTTG+CGG | - | tig0033735:19282-19301 | None:intergenic | 50.0% |
| GGCCATCATTGGAATCAGCA+GGG | - | tig0033735:19501-19520 | None:intergenic | 50.0% | |
| TGGCCATCATTGGAATCAGC+AGG | - | tig0033735:19502-19521 | None:intergenic | 50.0% | |
| AATAGCGGCAGCTCCATTGG+TGG | - | tig0033735:9880-9899 | None:intergenic | 55.0% | |
| GCAAATAGCGGCAGCTCCAT+TGG | - | tig0033735:9883-9902 | None:intergenic | 55.0% | |
| CGCCACACCTTTGACTGAGT+TGG | + | tig0033735:10031-10050 | Msa1452220:CDS | 55.0% | |
| AGGATCAATTCCAGGGGGCA+GGG | - | tig0033735:10105-10124 | None:intergenic | 55.0% | |
| GATCCTCGCTGCACAGTTTG+GGG | + | tig0033735:10598-10617 | Msa1452220:intron | 55.0% | |
| TGTGAGCCTCGTCACAGATG+AGG | - | tig0033735:11003-11022 | None:intergenic | 55.0% | |
| GAGCAGCCAATGCCTAATCC+AGG | - | tig0033735:11123-11142 | None:intergenic | 55.0% | |
| GCTGTCAGGAACTCCTTTGC+AGG | + | tig0033735:11165-11184 | Msa1452220:CDS | 55.0% | |
| CAGGAACTCCTTTGCAGGTG+AGG | + | tig0033735:11170-11189 | Msa1452220:intron | 55.0% | |
| GCAATGCCGCCCAATATTCC+AGG | - | tig0033735:11330-11349 | None:intergenic | 55.0% | |
| GCCCGTTTAACCTGCGTTTG+AGG | - | tig0033735:13102-13121 | None:intergenic | 55.0% | |
| AGGTCTGGATCATGGACAGG+AGG | + | tig0033735:13686-13705 | Msa1452220:intron | 55.0% | |
| GGTCTGGATCATGGACAGGA+GGG | + | tig0033735:13687-13706 | Msa1452220:intron | 55.0% | |
| GTCTGGATCATGGACAGGAG+GGG | + | tig0033735:13688-13707 | Msa1452220:CDS | 55.0% | |
| CCCTGGAGAAGAAAGGGGTT+AGG | + | tig0033735:14690-14709 | Msa1452220:intron | 55.0% | |
| ! | CTTGCTTGGTGAGTTGAGGG+AGG | + | tig0033735:14925-14944 | Msa1452220:intron | 55.0% |
| TGAGGGAGGAATTGAACGGG+AGG | + | tig0033735:14939-14958 | Msa1452220:intron | 55.0% | |
| !! | TGCTTCTAAGGCTTGCCTCC+AGG | - | tig0033735:14972-14991 | None:intergenic | 55.0% |
| GAGAAGTAGGTCTACCTCGG+AGG | + | tig0033735:15051-15070 | Msa1452220:intron | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | tig0033735:15288-15307 | Msa1452220:intron | 55.0% |
| AGGATGTTGCGCTGGATGAG+TGG | + | tig0033735:15352-15371 | Msa1452220:intron | 55.0% | |
| CACCATTAGGGAGAGAGTGG+GGG | + | tig0033735:15405-15424 | Msa1452220:intron | 55.0% | |
| TACCCCCACTCTCTCCCTAA+TGG | - | tig0033735:15410-15429 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | tig0033735:15663-15682 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | tig0033735:15662-15681 | Msa1452220:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | tig0033735:15663-15682 | Msa1452220:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | tig0033735:15669-15688 | Msa1452220:intron | 55.0% | |
| CGCCATCAAGCCTCAAGTGA+GGG | - | tig0033735:16254-16273 | None:intergenic | 55.0% | |
| CTGCTTGAACGACCCGTCTA+AGG | + | tig0033735:16308-16327 | Msa1452220:CDS | 55.0% | |
| CTCTTAAGCAGCAAGGCTGG+TGG | + | tig0033735:16454-16473 | Msa1452220:CDS | 55.0% | |
| GCTGCGGCCTGTTAATGGTT+AGG | - | tig0033735:16646-16665 | None:intergenic | 55.0% | |
| CTCTTGCTGCGGCCTGTTAA+TGG | - | tig0033735:16651-16670 | None:intergenic | 55.0% | |
| AACAGGCCGCAGCAAGAGTT+TGG | + | tig0033735:16653-16672 | Msa1452220:intron | 55.0% | |
| GCAGCAAGAGTTTGGAGGGA+TGG | + | tig0033735:16661-16680 | Msa1452220:CDS | 55.0% | |
| GTAGGTCTACCAGCGTCAGA+TGG | + | tig0033735:16854-16873 | Msa1452220:intron | 55.0% | |
| ! | CGTTGTTTCGCTGGTTGTGG+TGG | - | tig0033735:17292-17311 | None:intergenic | 55.0% |
| ! | GACACGTGTCGGTCACTTAG+AGG | - | tig0033735:17501-17520 | None:intergenic | 55.0% |
| GAAACCGACTGCTGCTGTAG+TGG | + | tig0033735:17754-17773 | Msa1452220:intron | 55.0% | |
| ! | TGTGCCACTACAGCAGCAGT+CGG | - | tig0033735:17761-17780 | None:intergenic | 55.0% |
| TGCTGCTGTAGTGGCACATG+TGG | + | tig0033735:17763-17782 | Msa1452220:intron | 55.0% | |
| GCTGCTGTAGTGGCACATGT+GGG | + | tig0033735:17764-17783 | Msa1452220:intron | 55.0% | |
| TCTTGGTTCCGGCCAATCTC+TGG | + | tig0033735:17814-17833 | Msa1452220:intron | 55.0% | |
| CTTGGTTCCGGCCAATCTCT+GGG | + | tig0033735:17815-17834 | Msa1452220:intron | 55.0% | |
| ! | TTTTCCGCCCAGAGATTGGC+CGG | - | tig0033735:17825-17844 | None:intergenic | 55.0% |
| GACTGACGGCAAGCGAACAT+TGG | + | tig0033735:17877-17896 | Msa1452220:intron | 55.0% | |
| CGCGTTCTTTGCAGCCCTTT+GGG | - | tig0033735:17980-17999 | None:intergenic | 55.0% | |
| CCAAAGGGCTGCAAAGAACG+CGG | + | tig0033735:17978-17997 | Msa1452220:intron | 55.0% | |
| GCTGAGATTGCAGGCTGCTT+AGG | + | tig0033735:18668-18687 | Msa1452220:CDS | 55.0% | |
| CACCGTCTGGTACAGAGGTT+GGG | - | tig0033735:18965-18984 | None:intergenic | 55.0% | |
| ACACCGTCTGGTACAGAGGT+TGG | - | tig0033735:18966-18985 | None:intergenic | 55.0% | |
| AAGGACACCGTCTGGTACAG+AGG | - | tig0033735:18970-18989 | None:intergenic | 55.0% | |
| TGTACCAGACGGTGTCCTTC+AGG | + | tig0033735:18971-18990 | Msa1452220:CDS | 55.0% | |
| CATCACCAGCTGAAGCCTGA+AGG | - | tig0033735:18989-19008 | None:intergenic | 55.0% | |
| ! | TCAGGCTTCAGCTGGTGATG+AGG | + | tig0033735:18989-19008 | Msa1452220:CDS | 55.0% |
| ! | GTCAAAGGTGTGGCGGAGGT+GGG | - | tig0033735:10026-10045 | None:intergenic | 60.0% |
| ! | AGTCAAAGGTGTGGCGGAGG+TGG | - | tig0033735:10027-10046 | None:intergenic | 60.0% |
| ! | CTCAGTCAAAGGTGTGGCGG+AGG | - | tig0033735:10030-10049 | None:intergenic | 60.0% |
| GGATCAATTCCAGGGGGCAG+GGG | - | tig0033735:10104-10123 | None:intergenic | 60.0% | |
| GAGGATCAATTCCAGGGGGC+AGG | - | tig0033735:10106-10125 | None:intergenic | 60.0% | |
| GTTGCAGAGGCAGGCACACT+TGG | + | tig0033735:10337-10356 | Msa1452220:intron | 60.0% | |
| GATCAAAGGCAGGCAGCCCT+AGG | - | tig0033735:10582-10601 | None:intergenic | 60.0% | |
| GTGCAGCGAGGATCAAAGGC+AGG | - | tig0033735:10592-10611 | None:intergenic | 60.0% | |
| CTTCCCCAAACTGTGCAGCG+AGG | - | tig0033735:10604-10623 | None:intergenic | 60.0% | |
| ACCATACGAAGTGGGAGCCC+AGG | + | tig0033735:13526-13545 | Msa1452220:CDS | 60.0% | |
| TCCTGGGCTCCCACTTCGTA+TGG | - | tig0033735:13530-13549 | None:intergenic | 60.0% | |
| AGTGGGAGCCCAGGAACTTC+AGG | + | tig0033735:13535-13554 | Msa1452220:CDS | 60.0% | |
| GGATCATGGACAGGAGGGGA+TGG | + | tig0033735:13692-13711 | Msa1452220:CDS | 60.0% | |
| TCATGGACAGGAGGGGATGG+AGG | + | tig0033735:13695-13714 | Msa1452220:CDS | 60.0% | |
| ! | GGAGGCTGGGTTGAGCTTTC+CGG | + | tig0033735:13713-13732 | Msa1452220:CDS | 60.0% |
| !!! | GGGTAGTTTTGGGTGGGGTC+AGG | - | tig0033735:14251-14270 | None:intergenic | 60.0% |
| CTGCTGTGGCAGAGGATGGA+AGG | - | tig0033735:14304-14323 | None:intergenic | 60.0% | |
| CTGACTGCTGTGGCAGAGGA+TGG | - | tig0033735:14308-14327 | None:intergenic | 60.0% | |
| CACTCTGACTGCTGTGGCAG+AGG | - | tig0033735:14312-14331 | None:intergenic | 60.0% | |
| AGGGAGCTTCGACCAGTGTG+AGG | + | tig0033735:14747-14766 | Msa1452220:intron | 60.0% | |
| TTCGACCAGTGTGAGGACGC+AGG | + | tig0033735:14754-14773 | Msa1452220:intron | 60.0% | |
| ACCAGTGTGAGGACGCAGGA+TGG | + | tig0033735:14758-14777 | Msa1452220:intron | 60.0% | |
| CCAGTGTGAGGACGCAGGAT+GGG | + | tig0033735:14759-14778 | Msa1452220:intron | 60.0% | |
| CAGTGTGAGGACGCAGGATG+GGG | + | tig0033735:14760-14779 | Msa1452220:intron | 60.0% | |
| TGAACGGGAGGCTAGAGACC+TGG | + | tig0033735:14951-14970 | Msa1452220:intron | 60.0% | |
| GAGAAGACCCGTAGATGCCG+TGG | + | tig0033735:15486-15505 | Msa1452220:intron | 60.0% | |
| GCGCCATCAAGCCTCAAGTG+AGG | - | tig0033735:16255-16274 | None:intergenic | 60.0% | |
| AGCAGCAAGGCTGGTGGTTG+TGG | + | tig0033735:16460-16479 | Msa1452220:CDS | 60.0% | |
| AGGCCGCAGCAAGAGTTTGG+AGG | + | tig0033735:16656-16675 | Msa1452220:intron | 60.0% | |
| GGCCGCAGCAAGAGTTTGGA+GGG | + | tig0033735:16657-16676 | Msa1452220:intron | 60.0% | |
| GGAGCAAAACGACAGCGTCG+CGG | + | tig0033735:16908-16927 | Msa1452220:CDS | 60.0% | |
| TAAGGTGGTCGGTGCGAAGG+CGG | + | tig0033735:17853-17872 | Msa1452220:intron | 60.0% | |
| TGCTGTGGGAGACGACCTAC+AGG | + | tig0033735:17935-17954 | Msa1452220:intron | 60.0% | |
| CCGCGTTCTTTGCAGCCCTT+TGG | - | tig0033735:17981-18000 | None:intergenic | 60.0% | |
| GGCTGCAAAGAACGCGGCTA+GGG | + | tig0033735:17984-18003 | Msa1452220:intron | 60.0% | |
| GAAGCCTGAAGGACACCGTC+TGG | - | tig0033735:18978-18997 | None:intergenic | 60.0% | |
| GGTGTCCTTCAGGCTTCAGC+TGG | + | tig0033735:18981-19000 | Msa1452220:CDS | 60.0% | |
| TTTCGCTCGACGTTGCGGCT+TGG | - | tig0033735:19277-19296 | None:intergenic | 60.0% | |
| TCAATTCCAGGGGGCAGGGG+CGG | - | tig0033735:10101-10120 | None:intergenic | 65.0% | |
| GACAGGAGGGGATGGAGGCT+GGG | + | tig0033735:13700-13719 | Msa1452220:CDS | 65.0% | |
| CCCATCCTGCGTCCTCACAC+TGG | - | tig0033735:14762-14781 | None:intergenic | 65.0% | |
| ACGGGAGGCTAGAGACCTGG+AGG | + | tig0033735:14954-14973 | Msa1452220:intron | 65.0% | |
| AAACGACAGCGTCGCGGCAC+AGG | + | tig0033735:16914-16933 | Msa1452220:CDS | 65.0% | |
| GGTTCCGGCCAATCTCTGGG+CGG | + | tig0033735:17818-17837 | Msa1452220:intron | 65.0% | |
| GGGTAAGGTGGTCGGTGCGA+AGG | + | tig0033735:17850-17869 | Msa1452220:intron | 65.0% | |
| GGGCTGCAAAGAACGCGGCT+AGG | + | tig0033735:17983-18002 | Msa1452220:intron | 65.0% | |
| GGACAGGAGGGGATGGAGGC+TGG | + | tig0033735:13699-13718 | Msa1452220:CDS | 70.0% | |
| GTGGGCCCGTCTGATGTCCC+TGG | + | tig0033735:17782-17801 | Msa1452220:intron | 70.0% | |
| GGTGCGAAGGCGGCGACTGA+CGG | + | tig0033735:17863-17882 | Msa1452220:intron | 70.0% | |
| ! | CCAGGGGGCAGGGGCGGCGA+GGG | - | tig0033735:10095-10114 | None:intergenic | 85.0% |
| ! | TCCAGGGGGCAGGGGCGGCG+AGG | - | tig0033735:10096-10115 | None:intergenic | 85.0% |
| ! | CCCTCGCCGCCCCTGCCCCC+TGG | + | tig0033735:10092-10111 | Msa1452220:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0033735 | gene | 9681 | 19671 | 9681 | ID=Msa1452220;Name=Msa1452220 |
| tig0033735 | mRNA | 9681 | 19671 | 9681 | ID=Msa1452220-mRNA-1;Parent=Msa1452220;Name=Msa1452220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.89|0.9|1|0.78|0.9|20|80|929 |
| tig0033735 | exon | 9681 | 10194 | 9681 | ID=Msa1452220-mRNA-1:exon:18465;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 10429 | 10519 | 10429 | ID=Msa1452220-mRNA-1:exon:18466;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 10614 | 10854 | 10614 | ID=Msa1452220-mRNA-1:exon:18467;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 10929 | 11054 | 10929 | ID=Msa1452220-mRNA-1:exon:18468;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 11130 | 11186 | 11130 | ID=Msa1452220-mRNA-1:exon:18469;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 11285 | 11371 | 11285 | ID=Msa1452220-mRNA-1:exon:18470;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 11652 | 11747 | 11652 | ID=Msa1452220-mRNA-1:exon:18471;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 11952 | 12002 | 11952 | ID=Msa1452220-mRNA-1:exon:18472;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 12938 | 13012 | 12938 | ID=Msa1452220-mRNA-1:exon:18473;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 13111 | 13197 | 13111 | ID=Msa1452220-mRNA-1:exon:18474;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 13514 | 13605 | 13514 | ID=Msa1452220-mRNA-1:exon:18475;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 13688 | 13820 | 13688 | ID=Msa1452220-mRNA-1:exon:18476;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 16210 | 16329 | 16210 | ID=Msa1452220-mRNA-1:exon:18477;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 16439 | 16552 | 16439 | ID=Msa1452220-mRNA-1:exon:18478;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 16658 | 16741 | 16658 | ID=Msa1452220-mRNA-1:exon:18479;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 16858 | 16935 | 16858 | ID=Msa1452220-mRNA-1:exon:18480;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 17022 | 17080 | 17022 | ID=Msa1452220-mRNA-1:exon:18481;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 18538 | 18715 | 18538 | ID=Msa1452220-mRNA-1:exon:18482;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 18912 | 19010 | 18912 | ID=Msa1452220-mRNA-1:exon:18483;Parent=Msa1452220-mRNA-1 |
| tig0033735 | exon | 19184 | 19671 | 19184 | ID=Msa1452220-mRNA-1:exon:18484;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 9681 | 10194 | 9681 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 10429 | 10519 | 10429 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 10614 | 10854 | 10614 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 10929 | 11054 | 10929 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 11130 | 11186 | 11130 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 11285 | 11371 | 11285 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 11652 | 11747 | 11652 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 11952 | 12002 | 11952 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 12938 | 13012 | 12938 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 13111 | 13197 | 13111 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 13514 | 13605 | 13514 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 13688 | 13820 | 13688 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 16210 | 16329 | 16210 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 16439 | 16552 | 16439 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 16658 | 16741 | 16658 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 16858 | 16935 | 16858 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 17022 | 17080 | 17022 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 18538 | 18715 | 18538 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 18912 | 19010 | 18912 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | CDS | 19184 | 19591 | 19184 | ID=Msa1452220-mRNA-1:cds;Parent=Msa1452220-mRNA-1 |
| tig0033735 | three_prime_UTR | 19592 | 19671 | 19592 | ID=Msa1452220-mRNA-1:three_prime_utr;Parent=Msa1452220-mRNA-1 |
| Gene Sequence |
| Protein sequence |