Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454200 | sp|Q680U9|TFB2_ARATH | 74.860 | 358 | 88 | 1 | 1 | 358 | 1 | 356 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454200 | A0A072V0D8 | 96.648 | 358 | 11 | 1 | 1 | 358 | 1 | 357 | 0.0 | 711 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0695820 | Msa1454200 | 0.849397 | 3.319828e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454200 | MtrunA17_Chr3g0114801 | 96.648 | 358 | 11 | 1 | 1 | 358 | 1 | 357 | 0.0 | 708 |
| Msa1454200 | MtrunA17_Chr4g0047481 | 96.648 | 358 | 10 | 1 | 1 | 358 | 1 | 356 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454200 | AT4G17020.1 | 74.860 | 358 | 88 | 1 | 1 | 358 | 1 | 356 | 0.0 | 567 |
| Msa1454200 | AT4G17020.3 | 74.860 | 358 | 88 | 1 | 1 | 358 | 1 | 356 | 0.0 | 566 |
| Msa1454200 | AT4G17020.2 | 74.860 | 358 | 88 | 1 | 1 | 358 | 1 | 356 | 0.0 | 566 |
Find 76 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCACTTTCAGTTAATTT+TGG | 0.182729 | tig0035076:+2881 | None:intergenic |
| ACCTGTGCCGGCTAAATTAT+TGG | 0.265931 | tig0035076:-4452 | Msa1454200:CDS |
| ATTTCAGAGGAACATAATTA+AGG | 0.312303 | tig0035076:-2378 | Msa1454200:CDS |
| CTCCTTTCTTGATGATGATT+CGG | 0.327686 | tig0035076:+2128 | None:intergenic |
| CAATGTTGCCATTGATAGAT+TGG | 0.332658 | tig0035076:-4395 | Msa1454200:CDS |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | tig0035076:-4908 | Msa1454200:CDS |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | tig0035076:+4900 | None:intergenic |
| GGCTAAATTATTGGCGGAAT+GGG | 0.342205 | tig0035076:-4443 | Msa1454200:CDS |
| CACAGCTTTGGTACATCATC+AGG | 0.346440 | tig0035076:-2749 | Msa1454200:CDS |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | tig0035076:-385 | Msa1454200:CDS |
| AATTATGTTCCTCTGAAATT+CGG | 0.351671 | tig0035076:+2382 | None:intergenic |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | tig0035076:+379 | None:intergenic |
| ATGACGAAACACAACAATAT+TGG | 0.374063 | tig0035076:+5041 | None:intergenic |
| GTAGAGTTTATCGAGTTTGA+TGG | 0.382908 | tig0035076:+4864 | None:intergenic |
| TGTGAGGCTCCCAACATTAG+AGG | 0.387289 | tig0035076:-3355 | Msa1454200:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | tig0035076:-4475 | Msa1454200:CDS |
| AAATAGCATGAAATCACGTT+TGG | 0.402103 | tig0035076:-5160 | Msa1454200:five_prime_UTR |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | tig0035076:-2342 | Msa1454200:intron |
| CAAAGAAGAGCTTATGTTGA+AGG | 0.407543 | tig0035076:+3071 | None:intergenic |
| TTGTGCTTTGATAGTCCATC+TGG | 0.412236 | tig0035076:+4415 | None:intergenic |
| GCTCCAAAATTAACTGAAAG+TGG | 0.432592 | tig0035076:-2884 | Msa1454200:CDS |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | tig0035076:-4930 | Msa1454200:exon |
| GCCAATAATTTAGCCGGCAC+AGG | 0.449508 | tig0035076:+4451 | None:intergenic |
| CGGCTAAATTATTGGCGGAA+TGG | 0.450685 | tig0035076:-4444 | Msa1454200:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | tig0035076:-2361 | Msa1454200:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | tig0035076:-2362 | Msa1454200:CDS |
| GACTTATGCTCTGGAACAAT+GGG | 0.456255 | tig0035076:-3325 | Msa1454200:CDS |
| AAGGTCTTGTCAACATGACT+TGG | 0.470934 | tig0035076:+3090 | None:intergenic |
| GTCTCAAGATCCTCTAATGT+TGG | 0.472624 | tig0035076:+3345 | None:intergenic |
| TTGAAGCTCTTGACAATGAC+AGG | 0.474245 | tig0035076:-4354 | Msa1454200:intron |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | tig0035076:+3369 | None:intergenic |
| TCTCAAGATCCTCTAATGTT+GGG | 0.478745 | tig0035076:+3346 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | tig0035076:-2194 | Msa1454200:intron |
| CATTCCGCCAATAATTTAGC+CGG | 0.493364 | tig0035076:+4445 | None:intergenic |
| AGACTTATGCTCTGGAACAA+TGG | 0.494366 | tig0035076:-3326 | Msa1454200:CDS |
| CTGCTCTCTCACTCTTTCTC+CGG | 0.497192 | tig0035076:-5100 | Msa1454200:five_prime_UTR |
| TCTCCTTCTTGCAGGAAGAT+CGG | 0.500349 | tig0035076:-3808 | Msa1454200:intron |
| TGGATACAAATGCACAGCTT+TGG | 0.501549 | tig0035076:-2761 | Msa1454200:CDS |
| ATAAACAGAACCTCTGACTC+AGG | 0.514589 | tig0035076:+3025 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | tig0035076:+4387 | None:intergenic |
| TAGATTTGTGACGTCGCTGC+CGG | 0.526322 | tig0035076:+5081 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.530426 | tig0035076:-4831 | Msa1454200:intron |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | tig0035076:-4902 | Msa1454200:CDS |
| GGATCTTGAGACTTATGCTC+TGG | 0.535259 | tig0035076:-3334 | Msa1454200:CDS |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | tig0035076:-2357 | Msa1454200:CDS |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | tig0035076:+3037 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.546852 | tig0035076:+3091 | None:intergenic |
| GACCGAATCATCATCAAGAA+AGG | 0.546881 | tig0035076:-2130 | Msa1454200:CDS |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | tig0035076:-326 | Msa1454200:CDS |
| AACACATATTTCTTTGCAAG+AGG | 0.556398 | tig0035076:+4496 | None:intergenic |
| CAGGAGAGAGGTGTTGATGC+AGG | 0.559845 | tig0035076:-2628 | Msa1454200:CDS |
| TGACTTGATATCATTCATGC+TGG | 0.561348 | tig0035076:-2605 | Msa1454200:CDS |
| GCGGAATGGGTGCTTCCAGA+TGG | 0.565096 | tig0035076:-4430 | Msa1454200:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | tig0035076:-740 | Msa1454200:CDS |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | tig0035076:+3384 | None:intergenic |
| AGTTTATCGAGTTTGATGGC+AGG | 0.583098 | tig0035076:+4868 | None:intergenic |
| GAGCAGAGGTCGAAATCGAT+CGG | 0.587306 | tig0035076:+5117 | None:intergenic |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | tig0035076:+4919 | None:intergenic |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | tig0035076:-4464 | Msa1454200:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | tig0035076:-3035 | Msa1454200:intron |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | tig0035076:+2345 | None:intergenic |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | tig0035076:-4899 | Msa1454200:CDS |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | tig0035076:+2354 | None:intergenic |
| CGAATCATCATCAAGAAAGG+AGG | 0.616443 | tig0035076:-2127 | Msa1454200:intron |
| ACATATTTCTTTGCAAGAGG+CGG | 0.617514 | tig0035076:+4499 | None:intergenic |
| ACACATTGACCGAATTTCAG+AGG | 0.620159 | tig0035076:-2391 | Msa1454200:CDS |
| TGTGCCGGCTAAATTATTGG+CGG | 0.623227 | tig0035076:-4449 | Msa1454200:CDS |
| TTATGCTCTGGAACAATGGG+AGG | 0.625310 | tig0035076:-3322 | Msa1454200:intron |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | tig0035076:-2727 | Msa1454200:intron |
| ACGTCACAAATCTAGTCGCG+TGG | 0.633216 | tig0035076:-5072 | Msa1454200:five_prime_UTR |
| GAGAAAGAGTGAGAGAGCAG+AGG | 0.648644 | tig0035076:+5103 | None:intergenic |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | tig0035076:-3400 | Msa1454200:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | tig0035076:-3401 | Msa1454200:intron |
| ACAGCTTTGGTACATCATCA+GGG | 0.675051 | tig0035076:-2748 | Msa1454200:CDS |
| AAACGAAATCAAAATGCCTG+AGG | 0.682481 | tig0035076:-4935 | Msa1454200:exon |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | tig0035076:-3371 | Msa1454200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAAATATAAATGTAG+CGG | - | tig0035076:4014-4033 | Msa1454200:intron | 10.0% |
| !! | AACAATTTATAGCTTAATTA+AGG | + | tig0035076:777-796 | None:intergenic | 15.0% |
| !!! | AATTTTCTTAAAAGTTTATG+AGG | - | tig0035076:1543-1562 | Msa1454200:intron | 15.0% |
| !! | GAATAATATACATAATCAAA+AGG | + | tig0035076:1604-1623 | None:intergenic | 15.0% |
| !! | AAAAAGAAAGAAGAAATATA+AGG | + | tig0035076:4208-4227 | None:intergenic | 15.0% |
| !! | GGAGTATATATTTAATTATA+TGG | - | tig0035076:4314-4333 | Msa1454200:intron | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | - | tig0035076:4720-4739 | Msa1454200:intron | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | - | tig0035076:4721-4740 | Msa1454200:intron | 15.0% |
| !! | AATAAGATGAAAACAACTTA+TGG | - | tig0035076:835-854 | Msa1454200:intron | 20.0% |
| !!! | TTTTGAGACAAATCATATAA+TGG | - | tig0035076:932-951 | Msa1454200:intron | 20.0% |
| !! | CTTACAAATCATAAAATGAT+AGG | - | tig0035076:1006-1025 | Msa1454200:intron | 20.0% |
| !!! | AACAAGTTTTTATCACAAAA+AGG | + | tig0035076:1378-1397 | None:intergenic | 20.0% |
| !!! | CTTTTAAGAAAATTCAAGAA+CGG | + | tig0035076:1537-1556 | None:intergenic | 20.0% |
| !!! | ACAGCATTTTTATAATTTCA+TGG | + | tig0035076:1983-2002 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+AGG | + | tig0035076:2018-2037 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | + | tig0035076:3071-3090 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | + | tig0035076:3122-3141 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTCACAACTTTAT+AGG | - | tig0035076:3323-3342 | Msa1454200:CDS | 20.0% |
| !!! | CTTTTTTTCACAACTTTATA+GGG | - | tig0035076:3324-3343 | Msa1454200:CDS | 20.0% |
| !! | AAAACAAATCAATTGTGAAA+CGG | + | tig0035076:3441-3460 | None:intergenic | 20.0% |
| !! | AAGCAAAGAAAAAAAAGAAT+GGG | + | tig0035076:3721-3740 | None:intergenic | 20.0% |
| !!! | TAATCTTTTTTGTTAGTAGA+TGG | - | tig0035076:3848-3867 | Msa1454200:intron | 20.0% |
| !!! | AAAAAGTTCTAAAACAAGAT+TGG | + | tig0035076:3895-3914 | None:intergenic | 20.0% |
| !! | ATTATGTCATCAAAATGAAA+AGG | - | tig0035076:4238-4257 | Msa1454200:intron | 20.0% |
| !!! | AATTTTGTTCATGTGTATAT+AGG | - | tig0035076:4293-4312 | Msa1454200:intron | 20.0% |
| !! | TACAAGTACAAGATAAATTA+AGG | + | tig0035076:4985-5004 | None:intergenic | 20.0% |
| !!! | CAATAATATTTTGGTGAAAT+AGG | + | tig0035076:5045-5064 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | - | tig0035076:5047-5066 | Msa1454200:five_prime_UTR | 20.0% |
| !!! | AAGACCAAACAATAATATTT+TGG | + | tig0035076:5054-5073 | None:intergenic | 20.0% |
| !!! | TATTCACTTTTCTCCTATTA+AGG | - | tig0035076:733-752 | Msa1454200:CDS | 25.0% |
| !! | TAAGGTGTTTAATGAAAACA+TGG | + | tig0035076:759-778 | None:intergenic | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | - | tig0035076:1059-1078 | Msa1454200:intron | 25.0% |
| !!! | AAGAGTTTTAGCAAAAAATC+AGG | + | tig0035076:1442-1461 | None:intergenic | 25.0% |
| ! | AGAAGAAAAATACTAAACTG+GGG | + | tig0035076:1709-1728 | None:intergenic | 25.0% |
| ! | GAGAAGAAAAATACTAAACT+GGG | + | tig0035076:1710-1729 | None:intergenic | 25.0% |
| !! | TTCAGAAACTTTTAGTACAT+GGG | - | tig0035076:1787-1806 | Msa1454200:intron | 25.0% |
| !! | TTGTCTTCTTTTTCTTTTCA+TGG | - | tig0035076:1826-1845 | Msa1454200:intron | 25.0% |
| ! | ATGTACCTTAATAGAAACAA+GGG | + | tig0035076:1873-1892 | None:intergenic | 25.0% |
| ! | TATGTACCTTAATAGAAACA+AGG | + | tig0035076:1874-1893 | None:intergenic | 25.0% |
| ! | ATAAAATCGTTAATACGAGT+GGG | - | tig0035076:1891-1910 | Msa1454200:intron | 25.0% |
| ! | TAACAAACCTATATAGACAA+TGG | - | tig0035076:1948-1967 | Msa1454200:intron | 25.0% |
| ! | AACAAACCTATATAGACAAT+GGG | - | tig0035076:1949-1968 | Msa1454200:intron | 25.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | + | tig0035076:2245-2264 | None:intergenic | 25.0% |
| !! | AAACCACTTTCAGTTAATTT+TGG | + | tig0035076:2656-2675 | None:intergenic | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | + | tig0035076:3072-3091 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCTTCCAATGATT+AGG | - | tig0035076:3108-3127 | Msa1454200:CDS | 25.0% |
| !!! | AATTATGTTCCTCTGAAATT+CGG | + | tig0035076:3155-3174 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGAACATAATTA+AGG | - | tig0035076:3156-3175 | Msa1454200:intron | 25.0% |
| !!! | AGATTTGTTGCTAATTTTGT+TGG | + | tig0035076:3372-3391 | None:intergenic | 25.0% |
| ! | TTTAATAGAAAGTTTAGACG+TGG | - | tig0035076:3464-3483 | Msa1454200:intron | 25.0% |
| ! | GAAGCAAAGAAAAAAAAGAA+TGG | + | tig0035076:3722-3741 | None:intergenic | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | - | tig0035076:3858-3877 | Msa1454200:intron | 25.0% |
| ! | ACTGCTAATGTAAAAAATAG+AGG | + | tig0035076:4049-4068 | None:intergenic | 25.0% |
| !! | ATATGGTTTAGATGATCTTT+TGG | - | tig0035076:4331-4350 | Msa1454200:intron | 25.0% |
| !! | TATGGTTTAGATGATCTTTT+GGG | - | tig0035076:4332-4351 | Msa1454200:intron | 25.0% |
| ! | TCATTGCATAAAATATTTCG+CGG | + | tig0035076:4836-4855 | None:intergenic | 25.0% |
| !!! | AAACTGGAAGTTGTTTTTTA+TGG | - | tig0035076:4941-4960 | Msa1454200:exon | 25.0% |
| !! | AAGCTTTATAGCTGAATTAA+TGG | + | tig0035076:5015-5034 | None:intergenic | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | - | tig0035076:5191-5210 | Msa1454200:five_prime_UTR | 25.0% |
| AAATAGCATGAAATCACGTT+TGG | - | tig0035076:374-393 | Msa1454200:CDS | 30.0% | |
| ATGACGAAACACAACAATAT+TGG | + | tig0035076:496-515 | None:intergenic | 30.0% | |
| ! | AATGAAAACATGGCCTTAAT+AGG | + | tig0035076:749-768 | None:intergenic | 30.0% |
| CTACTTAAGTAAGTACTTGT+GGG | + | tig0035076:878-897 | None:intergenic | 30.0% | |
| TCTACTTAAGTAAGTACTTG+TGG | + | tig0035076:879-898 | None:intergenic | 30.0% | |
| AACACATATTTCTTTGCAAG+AGG | + | tig0035076:1041-1060 | None:intergenic | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | + | tig0035076:1150-1169 | None:intergenic | 30.0% | |
| !!! | CTTGTTTTATTTGTTGCATG+TGG | - | tig0035076:1392-1411 | Msa1454200:intron | 30.0% |
| AATCACTTTATAGCATGACA+CGG | - | tig0035076:1510-1529 | Msa1454200:intron | 30.0% | |
| CTTAAAAGTTTATGAGGAAC+AGG | - | tig0035076:1549-1568 | Msa1454200:intron | 30.0% | |
| GGAGAAGAAAAATACTAAAC+TGG | + | tig0035076:1711-1730 | None:intergenic | 30.0% | |
| ! | CTTCAGAAACTTTTAGTACA+TGG | - | tig0035076:1786-1805 | Msa1454200:intron | 30.0% |
| !! | ATGTTCCCTTGTTTCTATTA+AGG | - | tig0035076:1865-1884 | Msa1454200:intron | 30.0% |
| CATAAAATCGTTAATACGAG+TGG | - | tig0035076:1890-1909 | Msa1454200:intron | 30.0% | |
| TTAACTCGTAATACGTGATA+TGG | + | tig0035076:1931-1950 | None:intergenic | 30.0% | |
| TGTACAGAGTAAACAAAAAG+TGG | + | tig0035076:2260-2279 | None:intergenic | 30.0% | |
| TTACCACAAAACAAAGTCAT+TGG | + | tig0035076:2395-2414 | None:intergenic | 30.0% | |
| ATTTGATGCATACCAAAAAC+TGG | + | tig0035076:2679-2698 | None:intergenic | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | + | tig0035076:2712-2731 | None:intergenic | 30.0% | |
| TTGTTATGAATTACAGCTGA+TGG | - | tig0035076:2753-2772 | Msa1454200:CDS | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | - | tig0035076:2807-2826 | Msa1454200:intron | 30.0% | |
| ATAGAGACAGATAACTGTTA+CGG | + | tig0035076:2836-2855 | None:intergenic | 30.0% | |
| !! | AGCTTAGTTTTCATGTCATT+GGG | - | tig0035076:2952-2971 | Msa1454200:intron | 30.0% |
| TTATATGCCTAATCATTGGA+AGG | + | tig0035076:3118-3137 | None:intergenic | 30.0% | |
| AGATGCAGAATGATTTAACT+TGG | - | tig0035076:3260-3279 | Msa1454200:intron | 30.0% | |
| AAATATAAATGTAGCGGTGT+CGG | - | tig0035076:4020-4039 | Msa1454200:intron | 30.0% | |
| TATGTATAAGACAGTGAACA+GGG | + | tig0035076:4184-4203 | None:intergenic | 30.0% | |
| ATATGTATAAGACAGTGAAC+AGG | + | tig0035076:4185-4204 | None:intergenic | 30.0% | |
| ! | ATGGTTTAGATGATCTTTTG+GGG | - | tig0035076:4333-4352 | Msa1454200:intron | 30.0% |
| ATATGTATGGAAGTTTCTGT+TGG | - | tig0035076:4430-4449 | Msa1454200:CDS | 30.0% | |
| !!! | TTTTTTTACCTTCCATTGGA+AGG | - | tig0035076:4470-4489 | Msa1454200:CDS | 30.0% |
| TGTAGGAAACTAATGTTTGT+TGG | - | tig0035076:4518-4537 | Msa1454200:intron | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | - | tig0035076:4794-4813 | Msa1454200:intron | 30.0% | |
| !! | AGATATTGCGGTTATTTTCA+AGG | - | tig0035076:4806-4825 | Msa1454200:intron | 30.0% |
| TTGAGTAGTTGTATATATGC+AGG | - | tig0035076:5117-5136 | Msa1454200:five_prime_UTR | 30.0% | |
| TGAGTAGTTGTATATATGCA+GGG | - | tig0035076:5118-5137 | Msa1454200:five_prime_UTR | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | - | tig0035076:5149-5168 | Msa1454200:five_prime_UTR | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | + | tig0035076:5158-5177 | None:intergenic | 30.0% | |
| AAACGAAATCAAAATGCCTG+AGG | - | tig0035076:599-618 | Msa1454200:intron | 35.0% | |
| AAATCAAAATGCCTGAGGTT+AGG | - | tig0035076:604-623 | Msa1454200:intron | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | - | tig0035076:626-645 | Msa1454200:intron | 35.0% | |
| GTAGAGTTTATCGAGTTTGA+TGG | + | tig0035076:673-692 | None:intergenic | 35.0% | |
| !! | TATGTTTTGAACATGCTTCG+TGG | - | tig0035076:975-994 | Msa1454200:intron | 35.0% |
| ACATATTTCTTTGCAAGAGG+CGG | + | tig0035076:1038-1057 | None:intergenic | 35.0% | |
| CAATGTTGCCATTGATAGAT+TGG | - | tig0035076:1139-1158 | Msa1454200:intron | 35.0% | |
| ! | AGACAATTTAGCCTCTGAAA+TGG | - | tig0035076:1267-1286 | Msa1454200:intron | 35.0% |
| ATCAGTTTGAACCATTTCAG+AGG | + | tig0035076:1281-1300 | None:intergenic | 35.0% | |
| ! | TCAAATGCTAGCCTATACTA+TGG | - | tig0035076:1311-1330 | Msa1454200:intron | 35.0% |
| CAGGATTTGATGTCACAATT+TGG | - | tig0035076:1568-1587 | Msa1454200:intron | 35.0% | |
| ACTAAACTGGGGTAAAACAA+GGG | + | tig0035076:1698-1717 | None:intergenic | 35.0% | |
| TACTAAACTGGGGTAAAACA+AGG | + | tig0035076:1699-1718 | None:intergenic | 35.0% | |
| ! | ATTTTTCTTCTCCTTCTTGC+AGG | - | tig0035076:1718-1737 | Msa1454200:intron | 35.0% |
| TAGAAACAAGGGAACATGAT+GGG | + | tig0035076:1862-1881 | None:intergenic | 35.0% | |
| ATAGAAACAAGGGAACATGA+TGG | + | tig0035076:1863-1882 | None:intergenic | 35.0% | |
| TCGTAATACGTGATATGGAA+GGG | + | tig0035076:1926-1945 | None:intergenic | 35.0% | |
| AAACCTATATAGACAATGGG+TGG | - | tig0035076:1952-1971 | Msa1454200:intron | 35.0% | |
| TAACCACCCATTGTCTATAT+AGG | + | tig0035076:1958-1977 | None:intergenic | 35.0% | |
| ACTTGAATGTTTGCTTTAGC+TGG | - | tig0035076:2088-2107 | Msa1454200:intron | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | - | tig0035076:2163-2182 | Msa1454200:CDS | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | + | tig0035076:2168-2187 | None:intergenic | 35.0% | |
| TCTCAAGATCCTCTAATGTT+GGG | + | tig0035076:2191-2210 | None:intergenic | 35.0% | |
| AACAAAGTCATTGGAGGTTT+AGG | + | tig0035076:2386-2405 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | + | tig0035076:2419-2438 | None:intergenic | 35.0% | |
| CAAAGAAGAGCTTATGTTGA+AGG | + | tig0035076:2466-2485 | None:intergenic | 35.0% | |
| ! | CTTTGATGAAAGTTTTCCAG+CGG | - | tig0035076:2481-2500 | Msa1454200:intron | 35.0% |
| AGTCAGAGGTTCTGTTTATT+TGG | - | tig0035076:2513-2532 | Msa1454200:intron | 35.0% | |
| GCTCCAAAATTAACTGAAAG+TGG | - | tig0035076:2650-2669 | Msa1454200:intron | 35.0% | |
| ! | TGAAAGTGGTTTCCAGTTTT+TGG | - | tig0035076:2664-2683 | Msa1454200:intron | 35.0% |
| TGACTTGATATCATTCATGC+TGG | - | tig0035076:2929-2948 | Msa1454200:intron | 35.0% | |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | - | tig0035076:2951-2970 | Msa1454200:intron | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | - | tig0035076:2953-2972 | Msa1454200:intron | 35.0% |
| ! | TTTTCACAACTTTATAGGGC+AGG | - | tig0035076:3328-3347 | Msa1454200:CDS | 35.0% |
| !! | CTCCTTTCTTGATGATGATT+CGG | + | tig0035076:3409-3428 | None:intergenic | 35.0% |
| TTCTGCATGTGATTTCGTTT+AGG | - | tig0035076:3493-3512 | Msa1454200:intron | 35.0% | |
| TCTGCATGTGATTTCGTTTA+GGG | - | tig0035076:3494-3513 | Msa1454200:intron | 35.0% | |
| TATGAGTATCATACAGGTGT+CGG | + | tig0035076:3668-3687 | None:intergenic | 35.0% | |
| GTGTTGTATGAGTATCATAC+AGG | + | tig0035076:3674-3693 | None:intergenic | 35.0% | |
| GATATGTCTTATATGTGCCA+AGG | + | tig0035076:3751-3770 | None:intergenic | 35.0% | |
| TCTACGAGATTAAAGATGTC+TGG | - | tig0035076:3769-3788 | Msa1454200:CDS | 35.0% | |
| ! | TGGTTTAGATGATCTTTTGG+GGG | - | tig0035076:4334-4353 | Msa1454200:intron | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | - | tig0035076:4417-4436 | Msa1454200:CDS | 35.0% |
| TGTTGGACATTATCAGTTTC+TGG | - | tig0035076:4447-4466 | Msa1454200:CDS | 35.0% | |
| !!! | CTGGTTTTTTTACCTTCCAT+TGG | - | tig0035076:4466-4485 | Msa1454200:CDS | 35.0% |
| GTTTCCTACAAGTTGTAGTA+TGG | + | tig0035076:4508-4527 | None:intergenic | 35.0% | |
| ! | CATCAGTCTGAAGTAGTAAA+AGG | + | tig0035076:4568-4587 | None:intergenic | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | - | tig0035076:4735-4754 | Msa1454200:intron | 35.0% |
| GAACATGAGAAAAGACTAGA+GGG | + | tig0035076:4883-4902 | None:intergenic | 35.0% | |
| AGGAAGTTCCAAAACCAAAA+GGG | + | tig0035076:4911-4930 | None:intergenic | 35.0% | |
| TAGGAAGTTCCAAAACCAAA+AGG | + | tig0035076:4912-4931 | None:intergenic | 35.0% | |
| !!! | TTTGGTTTTGGAACTTCCTA+TGG | - | tig0035076:4912-4931 | Msa1454200:CDS | 35.0% |
| CTTCCTATGGAAATTGAAAC+TGG | - | tig0035076:4925-4944 | Msa1454200:CDS | 35.0% | |
| CTTCCAGTTTCAATTTCCAT+AGG | + | tig0035076:4931-4950 | None:intergenic | 35.0% | |
| TGCCAAGAATTTCATGGACA+TGG | - | tig0035076:632-651 | Msa1454200:intron | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | + | tig0035076:637-656 | None:intergenic | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | - | tig0035076:635-654 | Msa1454200:intron | 40.0% | |
| ! | AGTTTATCGAGTTTGATGGC+AGG | + | tig0035076:669-688 | None:intergenic | 40.0% |
| CATTCCGCCAATAATTTAGC+CGG | + | tig0035076:1092-1111 | None:intergenic | 40.0% | |
| GGCTAAATTATTGGCGGAAT+GGG | - | tig0035076:1091-1110 | Msa1454200:intron | 40.0% | |
| ! | TTGTGCTTTGATAGTCCATC+TGG | + | tig0035076:1122-1141 | None:intergenic | 40.0% |
| TTGAAGCTCTTGACAATGAC+AGG | - | tig0035076:1180-1199 | Msa1454200:intron | 40.0% | |
| CTAGCCTATACTATGGAGTT+TGG | - | tig0035076:1318-1337 | Msa1454200:intron | 40.0% | |
| GTGTCCAAACTCCATAGTAT+AGG | + | tig0035076:1325-1344 | None:intergenic | 40.0% | |
| TGCACCTTGTAATGTGTTGA+AGG | - | tig0035076:1351-1370 | Msa1454200:intron | 40.0% | |
| AGGTCCTTCAACACATTACA+AGG | + | tig0035076:1358-1377 | None:intergenic | 40.0% | |
| TGAACAAAGACACACAGATG+TGG | + | tig0035076:1628-1647 | None:intergenic | 40.0% | |
| CTCGTAATACGTGATATGGA+AGG | + | tig0035076:1927-1946 | None:intergenic | 40.0% | |
| CACGTCCTTGTGGTTAAATA+TGG | - | tig0035076:2114-2133 | Msa1454200:intron | 40.0% | |
| CACTGCCATATTTAACCACA+AGG | + | tig0035076:2122-2141 | None:intergenic | 40.0% | |
| CTTGTGGTTAAATATGGCAG+TGG | - | tig0035076:2120-2139 | Msa1454200:intron | 40.0% | |
| !! | TTAGAAGGCATTGATTCCCT+CGG | + | tig0035076:2153-2172 | None:intergenic | 40.0% |
| GTCTCAAGATCCTCTAATGT+TGG | + | tig0035076:2192-2211 | None:intergenic | 40.0% | |
| !! | AGACTTATGCTCTGGAACAA+TGG | - | tig0035076:2208-2227 | Msa1454200:intron | 40.0% |
| !! | GACTTATGCTCTGGAACAAT+GGG | - | tig0035076:2209-2228 | Msa1454200:intron | 40.0% |
| CCACAAAACAAAGTCATTGG+AGG | + | tig0035076:2392-2411 | None:intergenic | 40.0% | |
| !!! | CCTCCAATGACTTTGTTTTG+TGG | - | tig0035076:2389-2408 | Msa1454200:CDS | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | + | tig0035076:2446-2465 | None:intergenic | 40.0% |
| ! | AAGGTCTTGTCAACATGACT+TGG | + | tig0035076:2447-2466 | None:intergenic | 40.0% |
| ATAAACAGAACCTCTGACTC+AGG | + | tig0035076:2512-2531 | None:intergenic | 40.0% | |
| TGGATACAAATGCACAGCTT+TGG | - | tig0035076:2773-2792 | Msa1454200:intron | 40.0% | |
| ! | ACAGCTTTGGTACATCATCA+GGG | - | tig0035076:2786-2805 | Msa1454200:intron | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | - | tig0035076:2881-2900 | Msa1454200:CDS | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | - | tig0035076:2956-2975 | Msa1454200:intron | 40.0% |
| ACACATTGACCGAATTTCAG+AGG | - | tig0035076:3143-3162 | Msa1454200:intron | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | - | tig0035076:3340-3359 | Msa1454200:CDS | 40.0% | |
| GACCGAATCATCATCAAGAA+AGG | - | tig0035076:3404-3423 | Msa1454200:intron | 40.0% | |
| CGAATCATCATCAAGAAAGG+AGG | - | tig0035076:3407-3426 | Msa1454200:intron | 40.0% | |
| CGAAATCACATGCAGAAACA+AGG | + | tig0035076:3490-3509 | None:intergenic | 40.0% | |
| AACTCCTTAGCTATGAAGCA+CGG | - | tig0035076:3518-3537 | Msa1454200:intron | 40.0% | |
| !! | GACACTTGTTGTATGAGTGT+CGG | + | tig0035076:3574-3593 | None:intergenic | 40.0% |
| GACACTCATACAACAAGTGT+CGG | - | tig0035076:3573-3592 | Msa1454200:intron | 40.0% | |
| GATACTCATACAACACGTGT+TGG | - | tig0035076:3678-3697 | Msa1454200:intron | 40.0% | |
| TCTGGAAGCAATGTTGATCA+AGG | - | tig0035076:3787-3806 | Msa1454200:CDS | 40.0% | |
| GAAGCAATGTTGATCAAGGA+GGG | - | tig0035076:3791-3810 | Msa1454200:CDS | 40.0% | |
| AAGCAATGTTGATCAAGGAG+GGG | - | tig0035076:3792-3811 | Msa1454200:CDS | 40.0% | |
| TGACGTCTTAGTGTTGTGTT+AGG | - | tig0035076:4071-4090 | Msa1454200:intron | 40.0% | |
| TTAGCATGTCTAAGGAGCTA+TGG | + | tig0035076:4107-4126 | None:intergenic | 40.0% | |
| ATAGCTCCTTAGACATGCTA+AGG | - | tig0035076:4106-4125 | Msa1454200:intron | 40.0% | |
| TAGCTCCTTAGACATGCTAA+GGG | - | tig0035076:4107-4126 | Msa1454200:intron | 40.0% | |
| ! | GGTTTAGATGATCTTTTGGG+GGG | - | tig0035076:4335-4354 | Msa1454200:intron | 40.0% |
| GCTTCCATACTACAACTTGT+AGG | - | tig0035076:4501-4520 | Msa1454200:CDS | 40.0% | |
| TGAACGATTGACATGCTATG+AGG | + | tig0035076:4592-4611 | None:intergenic | 40.0% | |
| ATAGCATGTCAATCGTTCAC+TGG | - | tig0035076:4593-4612 | Msa1454200:intron | 40.0% | |
| GGAACATGAGAAAAGACTAG+AGG | + | tig0035076:4884-4903 | None:intergenic | 40.0% | |
| TTCCAAAACCAAAAGGGAAG+GGG | + | tig0035076:4905-4924 | None:intergenic | 40.0% | |
| GTTCCAAAACCAAAAGGGAA+GGG | + | tig0035076:4906-4925 | None:intergenic | 40.0% | |
| AGTTCCAAAACCAAAAGGGA+AGG | + | tig0035076:4907-4926 | None:intergenic | 40.0% | |
| TTGGCAATGATCCTAACCTC+AGG | + | tig0035076:618-637 | None:intergenic | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | - | tig0035076:703-722 | Msa1454200:intron | 45.0% | |
| !! | ACCTGTGCCGGCTAAATTAT+TGG | - | tig0035076:1082-1101 | Msa1454200:intron | 45.0% |
| !! | TGTGCCGGCTAAATTATTGG+CGG | - | tig0035076:1085-1104 | Msa1454200:intron | 45.0% |
| CGGCTAAATTATTGGCGGAA+TGG | - | tig0035076:1090-1109 | Msa1454200:intron | 45.0% | |
| ACAAGGGTCGAGAGTGATAA+TGG | + | tig0035076:1682-1701 | None:intergenic | 45.0% | |
| TCTCCTTCTTGCAGGAAGAT+CGG | - | tig0035076:1726-1745 | Msa1454200:intron | 45.0% | |
| TTTCCGATCTTCCTGCAAGA+AGG | + | tig0035076:1732-1751 | None:intergenic | 45.0% | |
| GGATCTTGAGACTTATGCTC+TGG | - | tig0035076:2200-2219 | Msa1454200:intron | 45.0% | |
| !! | TTATGCTCTGGAACAATGGG+AGG | - | tig0035076:2212-2231 | Msa1454200:intron | 45.0% |
| GAGCTTCTCTGTCTCTGTAT+CGG | + | tig0035076:2634-2653 | None:intergenic | 45.0% | |
| ! | CACAGCTTTGGTACATCATC+AGG | - | tig0035076:2785-2804 | Msa1454200:intron | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | - | tig0035076:2887-2906 | Msa1454200:CDS | 45.0% |
| TGTGCAACAGATTCTCAGCA+AGG | + | tig0035076:2997-3016 | None:intergenic | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | - | tig0035076:3172-3191 | Msa1454200:intron | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | - | tig0035076:3173-3192 | Msa1454200:intron | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | - | tig0035076:3196-3215 | Msa1454200:intron | 45.0% | |
| TATGAAGCACGGACACCTAA+AGG | - | tig0035076:3529-3548 | Msa1454200:intron | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+CGG | - | tig0035076:3545-3564 | Msa1454200:intron | 45.0% | |
| ! | TTTGAGACACCAGTCTGAGT+TGG | + | tig0035076:3600-3619 | None:intergenic | 45.0% |
| TTCTTTGCTTCGACACTCCT+TGG | - | tig0035076:3634-3653 | Msa1454200:intron | 45.0% | |
| TCTTTGCTTCGACACTCCTT+GGG | - | tig0035076:3635-3654 | Msa1454200:intron | 45.0% | |
| ACAACACGTGTTGGACAACT+CGG | - | tig0035076:3687-3706 | Msa1454200:intron | 45.0% | |
| TTCTTTGCTTCGACACACCT+TGG | - | tig0035076:3731-3750 | Msa1454200:intron | 45.0% | |
| GGAAGCAATGTTGATCAAGG+AGG | - | tig0035076:3790-3809 | Msa1454200:CDS | 45.0% | |
| AGCAATGTTGATCAAGGAGG+GGG | - | tig0035076:3793-3812 | Msa1454200:CDS | 45.0% | |
| !! | TTAGATGATCTTTTGGGGGG+AGG | - | tig0035076:4338-4357 | Msa1454200:intron | 45.0% |
| !! | TAGATGATCTTTTGGGGGGA+GGG | - | tig0035076:4339-4358 | Msa1454200:intron | 45.0% |
| AGGGGAACTCTCTATACTGT+TGG | - | tig0035076:4358-4377 | Msa1454200:CDS | 45.0% | |
| CTTCTTCACCTTCCAATGGA+AGG | + | tig0035076:4481-4500 | None:intergenic | 45.0% | |
| CTTCCATTGGAAGGTGAAGA+AGG | - | tig0035076:4479-4498 | Msa1454200:CDS | 45.0% | |
| AAGCCTTCTTCACCTTCCAA+TGG | + | tig0035076:4485-4504 | None:intergenic | 45.0% | |
| CATGTCAATCGTTCACTGGT+TGG | - | tig0035076:4597-4616 | Msa1454200:intron | 45.0% | |
| !!! | TTCCCCTTCCCTTTTGGTTT+TGG | - | tig0035076:4900-4919 | Msa1454200:CDS | 45.0% |
| GAGCAGAGGTCGAAATCGAT+CGG | + | tig0035076:420-439 | None:intergenic | 50.0% | |
| GAGAAAGAGTGAGAGAGCAG+AGG | + | tig0035076:434-453 | None:intergenic | 50.0% | |
| CTGCTCTCTCACTCTTTCTC+CGG | - | tig0035076:434-453 | Msa1454200:intron | 50.0% | |
| TAGATTTGTGACGTCGCTGC+CGG | + | tig0035076:456-475 | None:intergenic | 50.0% | |
| ACGTCACAAATCTAGTCGCG+TGG | - | tig0035076:462-481 | Msa1454200:intron | 50.0% | |
| ! | GCATATTGATGGACCTGTGC+CGG | - | tig0035076:1070-1089 | Msa1454200:intron | 50.0% |
| GCCAATAATTTAGCCGGCAC+AGG | + | tig0035076:1086-1105 | None:intergenic | 50.0% | |
| TAGCTGGTAACACGTCCTTG+TGG | - | tig0035076:2104-2123 | Msa1454200:intron | 50.0% | |
| TGTGAGGCTCCCAACATTAG+AGG | - | tig0035076:2179-2198 | Msa1454200:CDS | 50.0% | |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | - | tig0035076:2894-2913 | Msa1454200:CDS | 50.0% |
| GTTGAAGTTTGACCAGCCCA+AGG | + | tig0035076:3192-3211 | None:intergenic | 50.0% | |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | - | tig0035076:3192-3211 | Msa1454200:intron | 50.0% |
| GTGTCCGTGCTTCATAGCTA+AGG | + | tig0035076:3525-3544 | None:intergenic | 50.0% | |
| GCACGGACACCTAAAGGATT+AGG | - | tig0035076:3535-3554 | Msa1454200:intron | 50.0% | |
| CGTGACACGCCTAATCCTTT+AGG | + | tig0035076:3547-3566 | None:intergenic | 50.0% | |
| GCAATGTTGATCAAGGAGGG+GGG | - | tig0035076:3794-3813 | Msa1454200:CDS | 50.0% | |
| CAATGTTGATCAAGGAGGGG+GGG | - | tig0035076:3795-3814 | Msa1454200:CDS | 50.0% | |
| CTCCTTAGACATGCTAAGGG+TGG | - | tig0035076:4110-4129 | Msa1454200:intron | 50.0% | |
| CTCCACCCTTAGCATGTCTA+AGG | + | tig0035076:4115-4134 | None:intergenic | 50.0% | |
| CTTAGACATGCTAAGGGTGG+AGG | - | tig0035076:4113-4132 | Msa1454200:intron | 50.0% | |
| !! | AGATGATCTTTTGGGGGGAG+GGG | - | tig0035076:4340-4359 | Msa1454200:intron | 50.0% |
| !! | CGTTCACTGGTTGGCTTTAG+TGG | - | tig0035076:4606-4625 | Msa1454200:intron | 50.0% |
| ! | CTCATGTTCCCCTTCCCTTT+TGG | - | tig0035076:4894-4913 | Msa1454200:CDS | 50.0% |
| CAATGGCATTACAGCAGACC+AGG | - | tig0035076:5208-5227 | Msa1454200:five_prime_UTR | 50.0% | |
| ATGGCAGTGGAACTTTGCCG+AGG | - | tig0035076:2133-2152 | Msa1454200:CDS | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | - | tig0035076:2134-2153 | Msa1454200:CDS | 55.0% | |
| !! | CAGGAGAGAGGTGTTGATGC+AGG | - | tig0035076:2906-2925 | Msa1454200:intron | 55.0% |
| ! | AGTGTCGGACCAACTCAGAC+TGG | - | tig0035076:3588-3607 | Msa1454200:intron | 55.0% |
| TGCTTCGACACTCCTTGGGT+TGG | - | tig0035076:3639-3658 | Msa1454200:intron | 55.0% | |
| GCGGAATGGGTGCTTCCAGA+TGG | - | tig0035076:1104-1123 | Msa1454200:intron | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | + | tig0035076:3183-3202 | None:intergenic | 60.0% | |
| !! | AGGTGTCGGACACCAACCCA+AGG | + | tig0035076:3654-3673 | None:intergenic | 60.0% |
| TCTGACTCAGGAGACGCCGC+TGG | + | tig0035076:2500-2519 | None:intergenic | 65.0% | |
| AGCGGCGTCTCCTGAGTCAG+AGG | - | tig0035076:2499-2518 | Msa1454200:intron | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | - | tig0035076:3177-3196 | Msa1454200:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035076 | gene | 324 | 5232 | 324 | ID=Msa1454200;Name=Msa1454200 |
| tig0035076 | mRNA | 324 | 5232 | 324 | ID=Msa1454200-mRNA-1;Parent=Msa1454200;Name=Msa1454200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=288|0.90|0.91|1|1|1|12|0|358 |
| tig0035076 | exon | 324 | 417 | 324 | ID=Msa1454200-mRNA-1:exon:19603;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 729 | 814 | 729 | ID=Msa1454200-mRNA-1:exon:19602;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 2128 | 2211 | 2128 | ID=Msa1454200-mRNA-1:exon:19601;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 2343 | 2426 | 2343 | ID=Msa1454200-mRNA-1:exon:19600;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 2579 | 2647 | 2579 | ID=Msa1454200-mRNA-1:exon:19599;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 2728 | 2787 | 2728 | ID=Msa1454200-mRNA-1:exon:19598;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 2871 | 2916 | 2871 | ID=Msa1454200-mRNA-1:exon:19597;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 3036 | 3136 | 3036 | ID=Msa1454200-mRNA-1:exon:19596;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 3323 | 3416 | 3323 | ID=Msa1454200-mRNA-1:exon:19595;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 3748 | 3816 | 3748 | ID=Msa1454200-mRNA-1:exon:19594;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 4355 | 4528 | 4355 | ID=Msa1454200-mRNA-1:exon:19593;Parent=Msa1454200-mRNA-1 |
| tig0035076 | exon | 4832 | 5232 | 4832 | ID=Msa1454200-mRNA-1:exon:19592;Parent=Msa1454200-mRNA-1 |
| tig0035076 | five_prime_UTR | 4945 | 5232 | 4945 | ID=Msa1454200-mRNA-1:five_prime_utr;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 4832 | 4944 | 4832 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 4355 | 4528 | 4355 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 3748 | 3816 | 3748 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 3323 | 3416 | 3323 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 3036 | 3136 | 3036 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 2871 | 2916 | 2871 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 2728 | 2787 | 2728 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 2579 | 2647 | 2579 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 2343 | 2426 | 2343 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 2128 | 2211 | 2128 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 729 | 814 | 729 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| tig0035076 | CDS | 324 | 417 | 324 | ID=Msa1454200-mRNA-1:cds;Parent=Msa1454200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
