Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1456540 | XP_003602833.1 | 96.410 | 390 | 13 | 1 | 1 | 389 | 1 | 390 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1456540 | sp|Q9SK86|ADHL1_ARATH | 64.456 | 377 | 132 | 2 | 14 | 389 | 12 | 387 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1456540 | G7J3Y9 | 96.410 | 390 | 13 | 1 | 1 | 389 | 1 | 390 | 0.0 | 763 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379350 | Msa1456540 | 0.907151 | 6.908276e-81 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1456540 | MtrunA17_Chr3g0132351 | 96.410 | 390 | 13 | 1 | 1 | 389 | 1 | 390 | 0.0 | 763 |
| Msa1456540 | MtrunA17_Chr5g0440521 | 60.847 | 378 | 145 | 2 | 13 | 389 | 15 | 390 | 3.52e-170 | 481 |
| Msa1456540 | MtrunA17_Chr3g0118441 | 57.990 | 388 | 160 | 2 | 4 | 390 | 1 | 386 | 1.49e-165 | 469 |
| Msa1456540 | MtrunA17_Chr3g0125911 | 50.667 | 375 | 180 | 4 | 16 | 389 | 9 | 379 | 6.42e-130 | 378 |
| Msa1456540 | MtrunA17_Chr3g0125961 | 50.267 | 374 | 181 | 4 | 16 | 388 | 9 | 378 | 2.70e-129 | 376 |
| Msa1456540 | MtrunA17_Chr3g0125941 | 49.867 | 375 | 183 | 4 | 16 | 389 | 10 | 380 | 1.71e-126 | 369 |
| Msa1456540 | MtrunA17_Chr6g0478081 | 50.933 | 375 | 177 | 3 | 16 | 390 | 10 | 377 | 1.07e-125 | 367 |
| Msa1456540 | MtrunA17_Chr1g0183131 | 47.594 | 374 | 191 | 4 | 16 | 388 | 8 | 377 | 6.42e-123 | 360 |
| Msa1456540 | MtrunA17_Chr7g0262421 | 47.059 | 374 | 193 | 4 | 16 | 388 | 10 | 379 | 7.81e-123 | 360 |
| Msa1456540 | MtrunA17_Chr7g0242291 | 51.053 | 380 | 177 | 7 | 14 | 388 | 18 | 393 | 1.79e-122 | 359 |
| Msa1456540 | MtrunA17_Chr3g0118431 | 57.295 | 281 | 119 | 1 | 100 | 379 | 9 | 289 | 1.69e-115 | 338 |
| Msa1456540 | MtrunA17_Chr5g0419681 | 45.789 | 380 | 192 | 7 | 13 | 388 | 5 | 374 | 1.77e-109 | 325 |
| Msa1456540 | MtrunA17_Chr4g0021211 | 44.149 | 376 | 197 | 7 | 16 | 388 | 33 | 398 | 8.44e-108 | 322 |
| Msa1456540 | MtrunA17_Chr7g0242301 | 46.537 | 361 | 153 | 6 | 32 | 388 | 1 | 325 | 9.39e-102 | 304 |
| Msa1456540 | MtrunA17_Chr8g0385221 | 27.749 | 382 | 260 | 9 | 15 | 388 | 51 | 424 | 4.24e-36 | 136 |
| Msa1456540 | MtrunA17_Chr6g0474141 | 26.316 | 361 | 220 | 14 | 30 | 379 | 27 | 352 | 2.70e-23 | 100 |
| Msa1456540 | MtrunA17_Chr5g0411871 | 27.385 | 325 | 173 | 14 | 44 | 349 | 54 | 334 | 1.79e-14 | 74.3 |
| Msa1456540 | MtrunA17_Chr5g0411911 | 27.508 | 309 | 193 | 10 | 44 | 349 | 41 | 321 | 4.25e-13 | 70.1 |
| Msa1456540 | MtrunA17_Chr4g0064291 | 26.462 | 325 | 176 | 13 | 44 | 349 | 39 | 319 | 1.35e-12 | 68.6 |
| Msa1456540 | MtrunA17_Chr1g0157021 | 33.562 | 146 | 79 | 6 | 44 | 188 | 38 | 166 | 1.18e-11 | 65.5 |
| Msa1456540 | MtrunA17_Chr8g0367151 | 30.667 | 150 | 78 | 5 | 44 | 188 | 39 | 167 | 3.61e-11 | 63.9 |
| Msa1456540 | MtrunA17_Chr8g0383721 | 26.667 | 315 | 173 | 10 | 44 | 342 | 39 | 311 | 6.24e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1456540 | AT1G22430.2 | 64.456 | 377 | 132 | 2 | 14 | 389 | 12 | 387 | 0.0 | 513 |
| Msa1456540 | AT1G22430.1 | 64.456 | 377 | 132 | 2 | 14 | 389 | 12 | 387 | 0.0 | 513 |
| Msa1456540 | AT1G22440.1 | 65.252 | 377 | 129 | 2 | 14 | 389 | 10 | 385 | 0.0 | 513 |
| Msa1456540 | AT4G22110.2 | 63.395 | 377 | 136 | 2 | 14 | 389 | 13 | 388 | 1.14e-178 | 502 |
| Msa1456540 | AT4G22110.1 | 63.395 | 377 | 136 | 2 | 14 | 389 | 13 | 388 | 1.14e-178 | 502 |
| Msa1456540 | AT5G42250.1 | 60.212 | 377 | 146 | 3 | 14 | 388 | 15 | 389 | 3.94e-167 | 473 |
| Msa1456540 | AT1G22430.3 | 66.667 | 285 | 93 | 2 | 14 | 297 | 12 | 295 | 1.05e-139 | 400 |
| Msa1456540 | AT1G77120.1 | 51.337 | 374 | 177 | 4 | 16 | 388 | 8 | 377 | 9.80e-131 | 380 |
| Msa1456540 | AT1G64710.1 | 50.392 | 383 | 182 | 6 | 10 | 388 | 2 | 380 | 1.83e-130 | 380 |
| Msa1456540 | AT1G32780.1 | 48.711 | 388 | 188 | 4 | 10 | 388 | 3 | 388 | 7.18e-125 | 366 |
| Msa1456540 | AT1G22430.4 | 65.000 | 260 | 89 | 2 | 14 | 272 | 12 | 270 | 5.87e-123 | 357 |
| Msa1456540 | AT1G22430.5 | 65.000 | 260 | 89 | 2 | 14 | 272 | 12 | 270 | 5.87e-123 | 357 |
| Msa1456540 | AT5G24760.1 | 49.330 | 373 | 182 | 3 | 16 | 388 | 14 | 379 | 6.33e-123 | 360 |
| Msa1456540 | AT1G64710.2 | 50.139 | 361 | 172 | 6 | 32 | 388 | 1 | 357 | 6.36e-123 | 360 |
| Msa1456540 | AT5G43940.1 | 48.118 | 372 | 188 | 4 | 16 | 386 | 8 | 375 | 1.56e-122 | 359 |
| Msa1456540 | AT5G43940.2 | 47.554 | 368 | 188 | 4 | 20 | 386 | 24 | 387 | 1.91e-119 | 352 |
| Msa1456540 | AT4G22110.3 | 65.490 | 255 | 86 | 2 | 14 | 267 | 13 | 266 | 3.36e-118 | 345 |
| Msa1456540 | AT5G24760.2 | 49.020 | 357 | 175 | 3 | 32 | 388 | 1 | 350 | 1.09e-115 | 341 |
| Msa1456540 | AT5G24760.3 | 49.020 | 357 | 175 | 3 | 32 | 388 | 1 | 350 | 1.09e-115 | 341 |
| Msa1456540 | AT1G64710.3 | 49.191 | 309 | 150 | 5 | 84 | 388 | 6 | 311 | 2.68e-99 | 298 |
| Msa1456540 | AT5G24760.4 | 49.804 | 255 | 126 | 2 | 134 | 388 | 13 | 265 | 1.70e-80 | 248 |
| Msa1456540 | AT5G63620.1 | 28.455 | 369 | 249 | 8 | 19 | 380 | 57 | 417 | 3.64e-36 | 137 |
| Msa1456540 | AT5G63620.2 | 28.455 | 369 | 249 | 8 | 19 | 380 | 57 | 417 | 3.71e-36 | 137 |
| Msa1456540 | AT5G63620.3 | 28.980 | 245 | 165 | 4 | 19 | 257 | 57 | 298 | 7.91e-26 | 106 |
| Msa1456540 | AT5G51970.1 | 25.424 | 354 | 208 | 13 | 44 | 381 | 43 | 356 | 6.01e-22 | 96.7 |
| Msa1456540 | AT5G51970.2 | 25.424 | 354 | 208 | 13 | 44 | 381 | 43 | 356 | 6.01e-22 | 96.7 |
| Msa1456540 | AT4G37970.1 | 24.317 | 366 | 186 | 13 | 44 | 379 | 40 | 344 | 2.22e-12 | 68.2 |
| Msa1456540 | AT2G21730.1 | 25.141 | 354 | 198 | 13 | 44 | 378 | 33 | 338 | 6.36e-12 | 67.0 |
| Msa1456540 | AT4G37970.4 | 26.667 | 255 | 143 | 8 | 44 | 275 | 40 | 273 | 1.72e-11 | 65.1 |
| Msa1456540 | AT4G37980.1 | 25.402 | 311 | 197 | 12 | 44 | 349 | 35 | 315 | 2.23e-11 | 65.1 |
| Msa1456540 | AT2G21890.1 | 24.857 | 350 | 203 | 12 | 44 | 378 | 33 | 337 | 3.70e-11 | 64.7 |
Find 127 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATACCTTTGCATCTTAT+TGG | 0.127700 | tig0037557:-2163 | None:intergenic |
| TTATGGACTTGGCACATTAT+TGG | 0.197128 | tig0037557:-1925 | None:intergenic |
| ACCAAAACAGCTGTGTTTAA+TGG | 0.199797 | tig0037557:+1954 | Msa1456540:five_prime_UTR |
| CCCACACTTATAGGTGATTA+AGG | 0.206441 | tig0037557:+9906 | Msa1456540:intron |
| AGCAACAATTGCACAAAGTT+TGG | 0.228530 | tig0037557:+2933 | Msa1456540:CDS |
| GCTTCGTGTCCTAAAATTCT+TGG | 0.241983 | tig0037557:-2578 | None:intergenic |
| TATGGACTTGGCACATTATT+GGG | 0.243703 | tig0037557:-1924 | None:intergenic |
| AATCAGGACAAATTTGAAAT+AGG | 0.247521 | tig0037557:+9471 | Msa1456540:CDS |
| AGAAGTGGTGCACCATTTAT+TGG | 0.249121 | tig0037557:+3016 | Msa1456540:CDS |
| ACCATCACCGGATCCCTATT+TGG | 0.255326 | tig0037557:+10246 | Msa1456540:CDS |
| ATTCGTACTTCCCATGATTT+AGG | 0.257153 | tig0037557:-2351 | None:intergenic |
| AGACCTTATGACATTCTAAA+AGG | 0.257256 | tig0037557:+10219 | Msa1456540:CDS |
| CATAGGCTTGGCATCCTTAA+TGG | 0.268660 | tig0037557:+9966 | Msa1456540:CDS |
| TCCATTAAACACAGCTGTTT+TGG | 0.278803 | tig0037557:-1955 | None:intergenic |
| GAGATGGAACAAGCAGGTTT+AGG | 0.280140 | tig0037557:+2982 | Msa1456540:CDS |
| AGGAGGGGAAGATCAGATTT+TGG | 0.284829 | tig0037557:-10279 | None:intergenic |
| ATTGAAGAAGACTCTCAATT+TGG | 0.288093 | tig0037557:-2081 | None:intergenic |
| AGCTACTAACACCCAATAAA+TGG | 0.291135 | tig0037557:-3028 | None:intergenic |
| TTGGCACATTATTGGGCTAT+TGG | 0.294967 | tig0037557:-1917 | None:intergenic |
| ATTAAAAGCCTCTGCCATTA+AGG | 0.295223 | tig0037557:-9980 | None:intergenic |
| TCATACACAGGAAAACAATT+TGG | 0.296006 | tig0037557:+9605 | Msa1456540:intron |
| GCCACTCTGATGTCACCTTT+TGG | 0.303788 | tig0037557:+2397 | Msa1456540:CDS |
| AATAATACCAAGGCTTAAAT+AGG | 0.310769 | tig0037557:+11110 | Msa1456540:three_prime_UTR |
| TCTTCAATCTTCATCATTTG+TGG | 0.325167 | tig0037557:+2096 | Msa1456540:five_prime_UTR |
| ACCTGTTAAAACGGGTTGAT+AGG | 0.351577 | tig0037557:-2003 | None:intergenic |
| TCTATGCATTCACCACAGTT+TGG | 0.364954 | tig0037557:-2894 | None:intergenic |
| TAAGTAAAATATGCTTAAAA+AGG | 0.366240 | tig0037557:+1836 | Msa1456540:five_prime_UTR |
| TTGGTTTCAAGCCTCCAAAT+AGG | 0.369588 | tig0037557:-10260 | None:intergenic |
| GCTTACAGATTTGTCGTTGT+AGG | 0.371102 | tig0037557:-9654 | None:intergenic |
| AGATGGAACAAGCAGGTTTA+GGG | 0.374578 | tig0037557:+2983 | Msa1456540:CDS |
| TGGTTTCAAGCCTCCAAATA+GGG | 0.376109 | tig0037557:-10259 | None:intergenic |
| GCAACAATTGCACAAAGTTT+GGG | 0.381600 | tig0037557:+2934 | Msa1456540:CDS |
| AGAGTATCCGTTGCATTATA+AGG | 0.382377 | tig0037557:+10945 | Msa1456540:CDS |
| AACCTGCTTGTTCCATCTCT+TGG | 0.385296 | tig0037557:-2978 | None:intergenic |
| CTATGCATTCACCACAGTTT+GGG | 0.391708 | tig0037557:-2893 | None:intergenic |
| GAAGTGGTGCACCATTTATT+GGG | 0.395014 | tig0037557:+3017 | Msa1456540:CDS |
| CGAGGAGCTTCAAAGATTAT+AGG | 0.397391 | tig0037557:+9438 | Msa1456540:CDS |
| CATTTAGCTCCAACATATGA+TGG | 0.408342 | tig0037557:+11034 | Msa1456540:three_prime_UTR |
| TTTGTATCCTTGCAGGGATA+GGG | 0.413313 | tig0037557:+9163 | Msa1456540:intron |
| TGGGCTTGGTGCTGTAGGCT+TGG | 0.418349 | tig0037557:+9236 | Msa1456540:CDS |
| TCAAGATATTCCTCTTGATA+AGG | 0.419451 | tig0037557:+3097 | Msa1456540:CDS |
| TGCCAAATGACCTGTTAAAA+CGG | 0.419851 | tig0037557:-2012 | None:intergenic |
| ATCACAAGAGGTGGGCTTCA+AGG | 0.423772 | tig0037557:+10886 | Msa1456540:CDS |
| AAACAACTTCATAAATAAAT+CGG | 0.437036 | tig0037557:+11085 | Msa1456540:three_prime_UTR |
| GCCAAATGACCTGTTAAAAC+GGG | 0.437255 | tig0037557:-2011 | None:intergenic |
| ACAGAGTCGTGGAGAGTGTA+GGG | 0.439450 | tig0037557:+2820 | Msa1456540:intron |
| CTCAGTTGCGGTGTTTCCAC+AGG | 0.447139 | tig0037557:+3128 | Msa1456540:CDS |
| TTCCATCTCTTGGCATGTCA+AGG | 0.447447 | tig0037557:-2968 | None:intergenic |
| AACGGATACTCTTTCCTTGA+AGG | 0.450121 | tig0037557:-10934 | None:intergenic |
| TATAGGCGTTGATCTAAATC+AGG | 0.457697 | tig0037557:+9455 | Msa1456540:CDS |
| TCTGTTACAGGAACTTAACT+TGG | 0.459373 | tig0037557:+10853 | Msa1456540:intron |
| CGAAAGACCTATTTAAGCCT+TGG | 0.459445 | tig0037557:-11117 | None:intergenic |
| AGATTTGTCGTTGTAGGTGG+AGG | 0.462539 | tig0037557:-9648 | None:intergenic |
| GTGATTAAGGATATGACAAA+TGG | 0.463825 | tig0037557:+9919 | Msa1456540:CDS |
| AATTAGACCCACCTAAATCA+TGG | 0.464922 | tig0037557:+2340 | Msa1456540:CDS |
| TTGGTAAACCATTATGGACT+TGG | 0.471679 | tig0037557:-1936 | None:intergenic |
| ATAATGTGCCAAGTCCATAA+TGG | 0.480475 | tig0037557:+1928 | Msa1456540:five_prime_UTR |
| CGTACTTCCCATGATTTAGG+TGG | 0.486581 | tig0037557:-2348 | None:intergenic |
| TTACAGGAACTTAACTTGGA+TGG | 0.487365 | tig0037557:+10857 | Msa1456540:intron |
| CTTGTAACGCTTCTGATGAT+CGG | 0.487709 | tig0037557:-2124 | None:intergenic |
| TTGCTTCGAATGCATAGGCT+TGG | 0.488095 | tig0037557:+9954 | Msa1456540:CDS |
| GATAGGGGCAGCTTGGAAGG+TGG | 0.495016 | tig0037557:+9179 | Msa1456540:CDS |
| GAATGTGGAAGAAGTGAAAG+AGG | 0.499905 | tig0037557:+2845 | Msa1456540:CDS |
| TCATAAGGTCTTAAAGTCAA+TGG | 0.500826 | tig0037557:-10207 | None:intergenic |
| GGGGAAAACGGTGATAATTG+GGG | 0.503172 | tig0037557:+10167 | Msa1456540:CDS |
| TCCAAATAGGGATCCGGTGA+TGG | 0.505173 | tig0037557:-10247 | None:intergenic |
| CGATCATCAGAAGCGTTACA+AGG | 0.506663 | tig0037557:+2125 | Msa1456540:CDS |
| TTGCAGGGATAGGGGCAGCT+TGG | 0.510319 | tig0037557:+9172 | Msa1456540:intron |
| TTCAACTTCCTCTATGACAA+GGG | 0.512129 | tig0037557:-2319 | None:intergenic |
| GGAGAGTGTAGGGGAGAATG+TGG | 0.512251 | tig0037557:+2830 | Msa1456540:CDS |
| AAGGTGGCGGATGTAGAAAA+AGG | 0.514460 | tig0037557:+9195 | Msa1456540:CDS |
| TACAGATTTGTCGTTGTAGG+TGG | 0.517707 | tig0037557:-9651 | None:intergenic |
| GTATACTTTGATTAGGGCTG+GGG | 0.522571 | tig0037557:+10147 | Msa1456540:intron |
| AGGGGCAGCTTGGAAGGTGG+CGG | 0.522982 | tig0037557:+9182 | Msa1456540:CDS |
| AAAAGGCTGGTAGTGGTAGT+TGG | 0.525623 | tig0037557:+1853 | Msa1456540:five_prime_UTR |
| CTTGGCATCCTTAATGGCAG+AGG | 0.533409 | tig0037557:+9972 | Msa1456540:CDS |
| CAAGCCTCCAAATAGGGATC+CGG | 0.534257 | tig0037557:-10253 | None:intergenic |
| CCACAGTTTGGGAGGAACAC+TGG | 0.534671 | tig0037557:-2882 | None:intergenic |
| TTGTATCCTTGCAGGGATAG+GGG | 0.535538 | tig0037557:+9164 | Msa1456540:intron |
| GATTTGTCGTTGTAGGTGGA+GGG | 0.537187 | tig0037557:-9647 | None:intergenic |
| AGGGATAGGGGCAGCTTGGA+AGG | 0.549497 | tig0037557:+9176 | Msa1456540:intron |
| ATCACCGGATCCCTATTTGG+AGG | 0.549651 | tig0037557:+10249 | Msa1456540:CDS |
| AGATTAACTCTACAAAAGAA+AGG | 0.549881 | tig0037557:+2047 | Msa1456540:five_prime_UTR |
| AAATGTTTACCATCATATGT+TGG | 0.550986 | tig0037557:-11043 | None:intergenic |
| ATCCTTGACATGCCAAGAGA+TGG | 0.551996 | tig0037557:+2966 | Msa1456540:CDS |
| GTAGAGTTAATCTTAGACTG+TGG | 0.554226 | tig0037557:-2037 | None:intergenic |
| AGAAGTGAAAGAGGGCGACT+TGG | 0.555464 | tig0037557:+2854 | Msa1456540:CDS |
| GAAAACGGTGATAATTGGGG+TGG | 0.557825 | tig0037557:+10170 | Msa1456540:CDS |
| TGCATTCACCACAGTTTGGG+AGG | 0.560405 | tig0037557:-2890 | None:intergenic |
| AGGTGAACCCCTTGTCATAG+AGG | 0.563425 | tig0037557:+2311 | Msa1456540:CDS |
| GTACTTCCCATGATTTAGGT+GGG | 0.563464 | tig0037557:-2347 | None:intergenic |
| TATCCGTTGCATTATAAGGA+TGG | 0.568382 | tig0037557:+10949 | Msa1456540:CDS |
| CTAAAAGGCAAAACCATCAC+CGG | 0.569450 | tig0037557:+10234 | Msa1456540:CDS |
| AGCAAGCCAATAAGATGCAA+AGG | 0.570572 | tig0037557:+2157 | Msa1456540:CDS |
| TCTCTTGGCATGTCAAGGAT+CGG | 0.570734 | tig0037557:-2963 | None:intergenic |
| TGGCTTCATATCACAAGAGG+TGG | 0.572643 | tig0037557:+10877 | Msa1456540:CDS |
| TACAATTAAGTACAGAGTCG+TGG | 0.574732 | tig0037557:+2809 | Msa1456540:intron |
| AAGGCTTGCTTGCTCAGTTG+CGG | 0.582731 | tig0037557:+3116 | Msa1456540:CDS |
| TACAGAGTCGTGGAGAGTGT+AGG | 0.586438 | tig0037557:+2819 | Msa1456540:intron |
| ATTCTTGGAAACCTAGCAGT+AGG | 0.592994 | tig0037557:-2563 | None:intergenic |
| ATTAGACCCACCTAAATCAT+GGG | 0.594297 | tig0037557:+2341 | Msa1456540:CDS |
| TAAGTACTTCTGAGCAAGGA+GGG | 0.597060 | tig0037557:-10295 | None:intergenic |
| AATGTGGAAGAAGTGAAAGA+GGG | 0.597105 | tig0037557:+2846 | Msa1456540:CDS |
| GATTATTGCTTCGAATGCAT+AGG | 0.597733 | tig0037557:+9949 | Msa1456540:CDS |
| AGCAAGCAAGCCTTATCAAG+AGG | 0.598014 | tig0037557:-3107 | None:intergenic |
| ATTAAGGATATGACAAATGG+AGG | 0.599771 | tig0037557:+9922 | Msa1456540:CDS |
| GATCCATCCTTATAATGCAA+CGG | 0.602365 | tig0037557:-10952 | None:intergenic |
| TGTCTAAGTACTTCTGAGCA+AGG | 0.606047 | tig0037557:-10299 | None:intergenic |
| TAGGGACATGAAAGGAGAAG+TGG | 0.619690 | tig0037557:+3001 | Msa1456540:CDS |
| TGCCAAGAGATGGAACAAGC+AGG | 0.620572 | tig0037557:+2976 | Msa1456540:CDS |
| GGCTTCATATCACAAGAGGT+GGG | 0.622762 | tig0037557:+10878 | Msa1456540:CDS |
| ATTCAACTTCCTCTATGACA+AGG | 0.625158 | tig0037557:-2320 | None:intergenic |
| ATAATTGGGGTGGAAATGCA+TGG | 0.627346 | tig0037557:+10180 | Msa1456540:CDS |
| TCAACTTCCTCTATGACAAG+GGG | 0.628421 | tig0037557:-2318 | None:intergenic |
| TATACTTTGATTAGGGCTGG+GGG | 0.638684 | tig0037557:+10148 | Msa1456540:intron |
| CAACGACAAATCTGTAAGCG+AGG | 0.644250 | tig0037557:+9658 | Msa1456540:CDS |
| GGATGGCTTCATATCACAAG+AGG | 0.646176 | tig0037557:+10874 | Msa1456540:CDS |
| AGCAGGTTTAGGGACATGAA+AGG | 0.654568 | tig0037557:+2993 | Msa1456540:CDS |
| GATCATCAGAAGCGTTACAA+GGG | 0.662460 | tig0037557:+2126 | Msa1456540:CDS |
| AAGTACTTCTGAGCAAGGAG+GGG | 0.663616 | tig0037557:-10294 | None:intergenic |
| CTAAGTACTTCTGAGCAAGG+AGG | 0.669426 | tig0037557:-10296 | None:intergenic |
| CAGAGTCGTGGAGAGTGTAG+GGG | 0.676936 | tig0037557:+2821 | Msa1456540:intron |
| TAAATCGGTTAATAATACCA+AGG | 0.684138 | tig0037557:+11100 | Msa1456540:three_prime_UTR |
| TCCAAAAGGTGACATCAGAG+TGG | 0.707208 | tig0037557:-2398 | None:intergenic |
| CCAGTGTTCCTCCCAAACTG+TGG | 0.714540 | tig0037557:+2882 | Msa1456540:CDS |
| GCTGTTGCAGCAAAGCAACG+AGG | 0.749239 | tig0037557:+9420 | Msa1456540:CDS |
| AGTGGTGGATGTAACCCATG+TGG | 0.808348 | tig0037557:+3064 | Msa1456540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATAATTTTTAAAAAAT+GGG | - | tig0037557:6303-6322 | None:intergenic | 0.0% |
| !!! | TAAATATAATTTTTAAAAAA+TGG | - | tig0037557:6304-6323 | None:intergenic | 0.0% |
| !!! | TAATTTGTATATTAAGAATA+TGG | + | tig0037557:3917-3936 | Msa1456540:intron | 10.0% |
| !! | AAAACATTAATATAAAAACT+GGG | + | tig0037557:4150-4169 | Msa1456540:intron | 10.0% |
| !!! | TATTCATTATTTTATATGTT+TGG | - | tig0037557:4480-4499 | None:intergenic | 10.0% |
| !! | TTTAGAAAAAAAAAAGAATT+TGG | + | tig0037557:5638-5657 | Msa1456540:intron | 10.0% |
| !! | TTAGAAAAAAAAAAGAATTT+GGG | + | tig0037557:5639-5658 | Msa1456540:intron | 10.0% |
| !!! | ATATAATTTTTAAAAAATGG+GGG | - | tig0037557:6301-6320 | None:intergenic | 10.0% |
| !! | TTCATTAAAAAAAATTACAT+AGG | - | tig0037557:6736-6755 | None:intergenic | 10.0% |
| !!! | ATCTTTAAATTTTTTTTTGA+AGG | - | tig0037557:7151-7170 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | tig0037557:7666-7685 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | tig0037557:7667-7686 | None:intergenic | 10.0% |
| !!! | ATTATATTATTTTGTAATAC+AGG | - | tig0037557:7812-7831 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATCTTTAAAC+TGG | - | tig0037557:9051-9070 | None:intergenic | 10.0% |
| !! | TGAATTTAAAAATATATTTG+AGG | - | tig0037557:10367-10386 | None:intergenic | 10.0% |
| !! | TAAGTAAAATATGCTTAAAA+AGG | + | tig0037557:1836-1855 | Msa1456540:five_prime_UTR | 15.0% |
| !!! | TTGATTAATCTAAAATTGAA+TGG | + | tig0037557:3887-3906 | Msa1456540:intron | 15.0% |
| !!! | TAATTCAAATTTTCCTTTTT+TGG | + | tig0037557:4045-4064 | Msa1456540:intron | 15.0% |
| !! | CAAAACATTAATATAAAAAC+TGG | + | tig0037557:4149-4168 | Msa1456540:intron | 15.0% |
| !!! | ATAATGATACTAAACATTTT+TGG | + | tig0037557:4198-4217 | Msa1456540:intron | 15.0% |
| !! | AAACTTTGATATATACTATA+AGG | + | tig0037557:5153-5172 | Msa1456540:intron | 15.0% |
| !! | AACTTTGATATATACTATAA+GGG | + | tig0037557:5154-5173 | Msa1456540:intron | 15.0% |
| !! | TTGATAGGTATAAATAAAAT+TGG | + | tig0037557:5519-5538 | Msa1456540:intron | 15.0% |
| !!! | TTAGTTAATCTTTAAGATTA+TGG | + | tig0037557:5831-5850 | Msa1456540:intron | 15.0% |
| !!! | TAGTTAATCTTTAAGATTAT+GGG | + | tig0037557:5832-5851 | Msa1456540:intron | 15.0% |
| !! | TTCATAATTAAACTTACTTT+AGG | - | tig0037557:6060-6079 | None:intergenic | 15.0% |
| !!! | GTTTTTACAAATTTCAATAA+TGG | + | tig0037557:6116-6135 | Msa1456540:intron | 15.0% |
| !!! | TTTTTAGCTTAAATATGATT+TGG | - | tig0037557:6210-6229 | None:intergenic | 15.0% |
| !!! | AAAATAATTTTGATCTTTTG+AGG | - | tig0037557:6442-6461 | None:intergenic | 15.0% |
| !! | CATTAAAAAAATAGTGAAAA+TGG | - | tig0037557:6608-6627 | None:intergenic | 15.0% |
| !! | AATATAAATATAAACATCTC+AGG | + | tig0037557:6957-6976 | Msa1456540:intron | 15.0% |
| !! | ATTGTAATGTTTAATGATAA+AGG | - | tig0037557:7101-7120 | None:intergenic | 15.0% |
| !!! | AATTCATCTTTATTGATTTT+TGG | - | tig0037557:7218-7237 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0037557:7601-7620 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0037557:7602-7621 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | tig0037557:7665-7684 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | + | tig0037557:7702-7721 | Msa1456540:intron | 15.0% |
| !!! | ATATTTCAATTTTCTTTTGA+AGG | + | tig0037557:8189-8208 | Msa1456540:intron | 15.0% |
| !!! | TATTTCAATTTTCTTTTGAA+GGG | + | tig0037557:8190-8209 | Msa1456540:intron | 15.0% |
| !!! | TACTTCTAAAAATTGATAAT+TGG | + | tig0037557:8821-8840 | Msa1456540:intron | 15.0% |
| !!! | TTTTATCTATTTTGAATCTT+GGG | + | tig0037557:9562-9581 | Msa1456540:intron | 15.0% |
| !!! | CCATTAATTGATTTTTTTTA+AGG | - | tig0037557:10124-10143 | None:intergenic | 15.0% |
| !! | CCTTAAAAAAAATCAATTAA+TGG | + | tig0037557:10121-10140 | Msa1456540:intron | 15.0% |
| !! | AAAAAAAATCAATTAATGGT+TGG | + | tig0037557:10125-10144 | Msa1456540:intron | 15.0% |
| !!! | TAAAAATATATTTGAGGTTA+AGG | - | tig0037557:10361-10380 | None:intergenic | 15.0% |
| !!! | AAATGATTTTTTTGATCAAA+TGG | - | tig0037557:10638-10657 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCAAAAACAATG+AGG | + | tig0037557:10682-10701 | Msa1456540:intron | 15.0% |
| !!! | ATCATTTTTTTTCTAAAGAA+TGG | + | tig0037557:10715-10734 | Msa1456540:intron | 15.0% |
| !! | AAAAAAACTAAAAATGTGAT+TGG | + | tig0037557:10819-10838 | Msa1456540:intron | 15.0% |
| !! | AAACAACTTCATAAATAAAT+CGG | + | tig0037557:11085-11104 | Msa1456540:three_prime_UTR | 15.0% |
| !! | GCATATAATTGAATAATTGA+TGG | - | tig0037557:2481-2500 | None:intergenic | 20.0% |
| !! | TCGACAATAGTAAAAATTAT+GGG | - | tig0037557:3259-3278 | None:intergenic | 20.0% |
| !! | ATCGACAATAGTAAAAATTA+TGG | - | tig0037557:3260-3279 | None:intergenic | 20.0% |
| !! | TTATATTTGCATCTTTAACT+AGG | - | tig0037557:3293-3312 | None:intergenic | 20.0% |
| !! | AGATGCAAATATAATATAGA+CGG | + | tig0037557:3299-3318 | Msa1456540:intron | 20.0% |
| !! | TGCATTTAAATTGTAACAAA+AGG | - | tig0037557:3627-3646 | None:intergenic | 20.0% |
| !! | TTGATTAAAGATAAAGTTTC+TGG | + | tig0037557:4239-4258 | Msa1456540:intron | 20.0% |
| !! | TATTGAGATCGATTAAAATT+TGG | + | tig0037557:4262-4281 | Msa1456540:intron | 20.0% |
| !! | ATTGAGATCGATTAAAATTT+GGG | + | tig0037557:4263-4282 | Msa1456540:intron | 20.0% |
| !!! | GAACAAACGTAATTTAATTT+GGG | + | tig0037557:4309-4328 | Msa1456540:intron | 20.0% |
| !!! | AACAAACGTAATTTAATTTG+GGG | + | tig0037557:4310-4329 | Msa1456540:intron | 20.0% |
| !! | TAATGAATAAATGATGAAAC+TGG | + | tig0037557:4491-4510 | Msa1456540:intron | 20.0% |
| !!! | AAATATGATTTGGAATGTTA+GGG | - | tig0037557:4586-4605 | None:intergenic | 20.0% |
| !!! | AAAATATGATTTGGAATGTT+AGG | - | tig0037557:4587-4606 | None:intergenic | 20.0% |
| !! | TTTGATCAATTTCAAACATT+GGG | - | tig0037557:5290-5309 | None:intergenic | 20.0% |
| !! | ATTTGATCAATTTCAAACAT+TGG | - | tig0037557:5291-5310 | None:intergenic | 20.0% |
| !!! | GGATCATTTTAATTATAAGT+CGG | - | tig0037557:5327-5346 | None:intergenic | 20.0% |
| !!! | TTTTTACTTCAAACAAGTTT+TGG | - | tig0037557:5348-5367 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAGAATTTGGGTT+TGG | + | tig0037557:5644-5663 | Msa1456540:intron | 20.0% |
| !! | TCTATTCTGATTTAGTATAT+AGG | + | tig0037557:5780-5799 | Msa1456540:intron | 20.0% |
| !! | GTGGTAATATAATGAAAAAA+AGG | - | tig0037557:5926-5945 | None:intergenic | 20.0% |
| !!! | TATTTAAGATTTGCAATAAG+TGG | + | tig0037557:6086-6105 | Msa1456540:intron | 20.0% |
| !! | TCATTTAAGAGATCAATTTA+CGG | + | tig0037557:7265-7284 | Msa1456540:intron | 20.0% |
| !!! | ACTATGTTTTTAGTGTTTTT+TGG | - | tig0037557:7296-7315 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | tig0037557:7532-7551 | None:intergenic | 20.0% |
| !!! | AGACACTTTTTTTTAGAAAA+TGG | - | tig0037557:7533-7552 | None:intergenic | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | + | tig0037557:7701-7720 | Msa1456540:intron | 20.0% |
| !!! | GATCAATTTTACTAAACATT+TGG | - | tig0037557:7782-7801 | None:intergenic | 20.0% |
| !! | ATACACATTTATAATGAATG+AGG | + | tig0037557:7838-7857 | Msa1456540:intron | 20.0% |
| !!! | AGACATATTTTCAATTAGTA+AGG | + | tig0037557:8082-8101 | Msa1456540:intron | 20.0% |
| !! | TAACATAATGCTTTCTAATA+TGG | + | tig0037557:8396-8415 | Msa1456540:intron | 20.0% |
| !! | AACATAATGCTTTCTAATAT+GGG | + | tig0037557:8397-8416 | Msa1456540:intron | 20.0% |
| !! | GAGAAACAATATCAAAAAAT+AGG | + | tig0037557:8502-8521 | Msa1456540:intron | 20.0% |
| !! | GACATAAATGACATTTAAAA+TGG | - | tig0037557:8594-8613 | None:intergenic | 20.0% |
| !!! | AAAAAAAATACAGACGTTTT+TGG | - | tig0037557:8619-8638 | None:intergenic | 20.0% |
| !! | ATAATGAGCAAATTTCATTA+TGG | - | tig0037557:8946-8965 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTATTGGGCA+AGG | + | tig0037557:9061-9080 | Msa1456540:intron | 20.0% |
| !! | CTACAAATTATAACAAGTTA+TGG | + | tig0037557:9098-9117 | Msa1456540:intron | 20.0% |
| !! | AATTATAACAAGTTATGGTA+TGG | + | tig0037557:9103-9122 | Msa1456540:intron | 20.0% |
| !! | CATTATTCGATATTTCAAAT+TGG | + | tig0037557:9127-9146 | Msa1456540:intron | 20.0% |
| !! | AAGAAAACTTGACAATTTAA+AGG | - | tig0037557:9318-9337 | None:intergenic | 20.0% |
| !! | AAATCACACAAAAATCTAAT+CGG | - | tig0037557:9366-9385 | None:intergenic | 20.0% |
| !! | AGAAAATATCACTGAAAATA+TGG | - | tig0037557:9508-9527 | None:intergenic | 20.0% |
| !!! | CTTTTATCTATTTTGAATCT+TGG | + | tig0037557:9561-9580 | Msa1456540:intron | 20.0% |
| !! | AAAAAAATACTACATGACTT+TGG | - | tig0037557:9740-9759 | None:intergenic | 20.0% |
| !! | CATATTCATATCTTATTAGT+AGG | + | tig0037557:9762-9781 | Msa1456540:intron | 20.0% |
| !! | TTATTAGTAGGAATTGAATT+CGG | + | tig0037557:9774-9793 | Msa1456540:intron | 20.0% |
| !! | AACCATTAGTTAATGTTAAT+CGG | - | tig0037557:10097-10116 | None:intergenic | 20.0% |
| !!! | TATGATATACTGATTATACA+TGG | - | tig0037557:10336-10355 | None:intergenic | 20.0% |
| !!! | AGTGTATTAACTATTTTTTC+CGG | - | tig0037557:10511-10530 | None:intergenic | 20.0% |
| !! | AATAGTTAATACACTGAATA+TGG | + | tig0037557:10516-10535 | Msa1456540:intron | 20.0% |
| !!! | TTATTTTGAAGTGTTTGTTT+AGG | + | tig0037557:10598-10617 | Msa1456540:intron | 20.0% |
| ! | TAAAATATGCTTAAAAAGGC+TGG | + | tig0037557:1840-1859 | Msa1456540:five_prime_UTR | 25.0% |
| !! | TATCGTTTTCAGTTAATCAT+CGG | - | tig0037557:1882-1901 | None:intergenic | 25.0% |
| ! | AGATTAACTCTACAAAAGAA+AGG | + | tig0037557:2047-2066 | Msa1456540:five_prime_UTR | 25.0% |
| !! | GCTTTAGTCTTTAATTTCTA+TGG | + | tig0037557:2211-2230 | Msa1456540:intron | 25.0% |
| ! | TTTGACAATTGTTCATGAAA+TGG | + | tig0037557:2264-2283 | Msa1456540:intron | 25.0% |
| ! | GTCAAACTATTATTACTATG+TGG | + | tig0037557:2678-2697 | Msa1456540:intron | 25.0% |
| !!! | TTGAGTTATTTTAACCACAT+GGG | - | tig0037557:3081-3100 | None:intergenic | 25.0% |
| ! | TATAGCTTATACAAATGGAA+TGG | - | tig0037557:3198-3217 | None:intergenic | 25.0% |
| ! | CATCTTTAACTAGGATAAAA+TGG | - | tig0037557:3284-3303 | None:intergenic | 25.0% |
| ! | TAGTTGTTATAAAGTCTAAC+CGG | - | tig0037557:3351-3370 | None:intergenic | 25.0% |
| ! | TATAACAACTAGGATAATAC+CGG | + | tig0037557:3360-3379 | Msa1456540:intron | 25.0% |
| !! | TTTTTATTGGAGTATGCTAT+AGG | - | tig0037557:3527-3546 | None:intergenic | 25.0% |
| ! | AATACGATATCCACATAAAA+TGG | - | tig0037557:3809-3828 | None:intergenic | 25.0% |
| ! | TTAATATAAAAACTGGGTTC+TGG | + | tig0037557:4156-4175 | Msa1456540:intron | 25.0% |
| ! | GGAACAAACGTAATTTAATT+TGG | + | tig0037557:4308-4327 | Msa1456540:intron | 25.0% |
| !! | AAATTGAAATGGTTAGTTGT+TGG | + | tig0037557:4404-4423 | Msa1456540:intron | 25.0% |
| ! | AAATGATGAAACTGGTTAAA+AGG | + | tig0037557:4499-4518 | Msa1456540:intron | 25.0% |
| !!! | GATTAGATTGCTTGTTATTT+AGG | + | tig0037557:4541-4560 | Msa1456540:intron | 25.0% |
| !!! | ATTCCAAATCATATTTTAGC+TGG | + | tig0037557:4590-4609 | Msa1456540:intron | 25.0% |
| ! | TTTCCAGCTAAAATATGATT+TGG | - | tig0037557:4596-4615 | None:intergenic | 25.0% |
| ! | AGTAGTTGAATACATAAGTT+TGG | + | tig0037557:4742-4761 | Msa1456540:intron | 25.0% |
| !! | TTTGATTTAGCATGAAGTAT+AGG | - | tig0037557:5003-5022 | None:intergenic | 25.0% |
| !! | ATATACTATAAGGGCTTTAA+AGG | + | tig0037557:5163-5182 | Msa1456540:intron | 25.0% |
| !!! | TATACTATAAGGGCTTTAAA+GGG | + | tig0037557:5164-5183 | Msa1456540:intron | 25.0% |
| ! | TTGATCAATTTCAAACATTG+GGG | - | tig0037557:5289-5308 | None:intergenic | 25.0% |
| !! | TGTTTGAAATTGATCAAATG+TGG | + | tig0037557:5292-5311 | Msa1456540:intron | 25.0% |
| !! | CTTGTTTGAAGTAAAAAGTT+TGG | + | tig0037557:5351-5370 | Msa1456540:intron | 25.0% |
| !! | TATGGAATGAGATTTTTGAT+AGG | + | tig0037557:5504-5523 | Msa1456540:intron | 25.0% |
| ! | CTTATGTTATTGTAACTAGA+TGG | + | tig0037557:5740-5759 | Msa1456540:intron | 25.0% |
| !! | TTAGAATGTTTTGTCATGTT+TGG | - | tig0037557:5898-5917 | None:intergenic | 25.0% |
| ! | ACAAATTTCAATAATGGCTT+TGG | + | tig0037557:6122-6141 | Msa1456540:intron | 25.0% |
| ! | CATCTCATCCAAATATTATT+CGG | + | tig0037557:6241-6260 | Msa1456540:intron | 25.0% |
| ! | ATCTCATCCAAATATTATTC+GGG | + | tig0037557:6242-6261 | Msa1456540:intron | 25.0% |
| ! | TATCATACCCGAATAATATT+TGG | - | tig0037557:6252-6271 | None:intergenic | 25.0% |
| ! | AGTCATCAATTTACTGTAAA+AGG | - | tig0037557:6576-6595 | None:intergenic | 25.0% |
| ! | AAAATAGTGAAAATGGTAAG+AGG | - | tig0037557:6601-6620 | None:intergenic | 25.0% |
| ! | AAAATTACATAGGAATCACA+CGG | - | tig0037557:6726-6745 | None:intergenic | 25.0% |
| ! | AATCCTTATATGTCTTACTA+TGG | + | tig0037557:7382-7401 | Msa1456540:intron | 25.0% |
| ! | ACAAAATTGTATCCACTTTA+TGG | + | tig0037557:7452-7471 | Msa1456540:intron | 25.0% |
| !! | CAATTTTACTAAACATTTGG+TGG | - | tig0037557:7779-7798 | None:intergenic | 25.0% |
| !! | TTTTCTTTCGAAGAGATAAT+CGG | + | tig0037557:7925-7944 | Msa1456540:intron | 25.0% |
| ! | ATATATCTCACAAACAATAG+AGG | + | tig0037557:8120-8139 | Msa1456540:intron | 25.0% |
| !!! | GCTAGTTTTTCATTGTTTAT+TGG | - | tig0037557:8270-8289 | None:intergenic | 25.0% |
| ! | ACATAATGCTTTCTAATATG+GGG | + | tig0037557:8398-8417 | Msa1456540:intron | 25.0% |
| !!! | ATGGTTTTGTAACAAATCAA+AGG | - | tig0037557:8575-8594 | None:intergenic | 25.0% |
| !! | AATTTGCTCATTATGAATGA+AGG | + | tig0037557:8952-8971 | Msa1456540:intron | 25.0% |
| ! | TATTCGATATTTCAAATTGG+TGG | + | tig0037557:9130-9149 | Msa1456540:intron | 25.0% |
| !! | AATCAGGACAAATTTGAAAT+AGG | + | tig0037557:9471-9490 | Msa1456540:CDS | 25.0% |
| ! | AACCGATTAACATTAACTAA+TGG | + | tig0037557:10092-10111 | Msa1456540:intron | 25.0% |
| !! | TAAAAAAGTACAAGTGTGTT+TGG | - | tig0037557:10486-10505 | None:intergenic | 25.0% |
| !!! | GTGTATTAACTATTTTTTCC+GGG | - | tig0037557:10510-10529 | None:intergenic | 25.0% |
| ! | AAATGTTTACCATCATATGT+TGG | - | tig0037557:11046-11065 | None:intergenic | 25.0% |
| ! | TAAATCGGTTAATAATACCA+AGG | + | tig0037557:11100-11119 | Msa1456540:three_prime_UTR | 25.0% |
| ! | AATAATACCAAGGCTTAAAT+AGG | + | tig0037557:11110-11129 | Msa1456540:three_prime_UTR | 25.0% |
| ATTGAAGAAGACTCTCAATT+TGG | - | tig0037557:2084-2103 | None:intergenic | 30.0% | |
| TCTTCAATCTTCATCATTTG+TGG | + | tig0037557:2096-2115 | Msa1456540:five_prime_UTR | 30.0% | |
| TTCATACCTTTGCATCTTAT+TGG | - | tig0037557:2166-2185 | None:intergenic | 30.0% | |
| !! | TGAAGTATCCATTTTCCAAA+AGG | - | tig0037557:2415-2434 | None:intergenic | 30.0% |
| ! | TTGATAATATGCAGAGTTTG+TGG | - | tig0037557:2453-2472 | None:intergenic | 30.0% |
| ! | ATCCCGTAATTTTCTTTTTC+AGG | + | tig0037557:2538-2557 | Msa1456540:intron | 30.0% |
| TGCCTGAAAAAGAAAATTAC+GGG | - | tig0037557:2543-2562 | None:intergenic | 30.0% | |
| GTGCCTGAAAAAGAAAATTA+CGG | - | tig0037557:2544-2563 | None:intergenic | 30.0% | |
| !!! | CTTGAGTTATTTTAACCACA+TGG | - | tig0037557:3082-3101 | None:intergenic | 30.0% |
| TCAAGATATTCCTCTTGATA+AGG | + | tig0037557:3097-3116 | Msa1456540:CDS | 30.0% | |
| TGGAGGCAAATTAAATTGAA+AGG | - | tig0037557:3163-3182 | None:intergenic | 30.0% | |
| AATGGATAATACATATGTGG+AGG | - | tig0037557:3180-3199 | None:intergenic | 30.0% | |
| TGGAATGGATAATACATATG+TGG | - | tig0037557:3183-3202 | None:intergenic | 30.0% | |
| CTAGCTATAGCTTATACAAA+TGG | - | tig0037557:3203-3222 | None:intergenic | 30.0% | |
| GGTTAGACTTTATAACAACT+AGG | + | tig0037557:3350-3369 | Msa1456540:intron | 30.0% | |
| ATTGAATTGAAATGTGTGTG+TGG | + | tig0037557:3441-3460 | Msa1456540:intron | 30.0% | |
| TTGAATTGAAATGTGTGTGT+GGG | + | tig0037557:3442-3461 | Msa1456540:intron | 30.0% | |
| TTAAGCAATAGAGAAATGCT+AGG | + | tig0037557:3481-3500 | Msa1456540:intron | 30.0% | |
| TAAGCAATAGAGAAATGCTA+GGG | + | tig0037557:3482-3501 | Msa1456540:intron | 30.0% | |
| ! | GTGACATGGCTAATTTTTAT+TGG | - | tig0037557:3540-3559 | None:intergenic | 30.0% |
| GGTAAATGAACAAAGAAAGT+GGG | - | tig0037557:3562-3581 | None:intergenic | 30.0% | |
| AGGTAAATGAACAAAGAAAG+TGG | - | tig0037557:3563-3582 | None:intergenic | 30.0% | |
| ATAGTTTAGATCGCTAATGA+CGG | - | tig0037557:3866-3885 | None:intergenic | 30.0% | |
| AAGAACCCAACTCAATTATT+GGG | - | tig0037557:4108-4127 | None:intergenic | 30.0% | |
| TAAGAACCCAACTCAATTAT+TGG | - | tig0037557:4109-4128 | None:intergenic | 30.0% | |
| ! | GATTCGTTTGTAGTTCTATT+TGG | + | tig0037557:4368-4387 | Msa1456540:intron | 30.0% |
| TTGCAGCAATCAAATTGAAA+TGG | + | tig0037557:4393-4412 | Msa1456540:intron | 30.0% | |
| ! | TTTTCTCAAAACCAGTAACA+AGG | - | tig0037557:4440-4459 | None:intergenic | 30.0% |
| AAAGGTGAAGAAGTAAAGAA+TGG | + | tig0037557:4517-4536 | Msa1456540:intron | 30.0% | |
| CCAAGATCATGTATCTATTT+GGG | + | tig0037557:4666-4685 | Msa1456540:intron | 30.0% | |
| ACCTTAAATCATTGTAGTCA+AGG | + | tig0037557:4694-4713 | Msa1456540:intron | 30.0% | |
| TCCTTGACTACAATGATTTA+AGG | - | tig0037557:4698-4717 | None:intergenic | 30.0% | |
| !! | ATACTATAAGGGCTTTAAAG+GGG | + | tig0037557:5165-5184 | Msa1456540:intron | 30.0% |
| TTCATAAATCCTATACCTTG+AGG | + | tig0037557:5200-5219 | Msa1456540:intron | 30.0% | |
| GCAACAAAGAACACAAATAT+CGG | + | tig0037557:5245-5264 | Msa1456540:intron | 30.0% | |
| TGATCAATTTCAAACATTGG+GGG | - | tig0037557:5288-5307 | None:intergenic | 30.0% | |
| CTTTGCAACCAATTCAATAA+TGG | + | tig0037557:5947-5966 | Msa1456540:intron | 30.0% | |
| ACCAATTCAATAATGGTAGA+AGG | + | tig0037557:5954-5973 | Msa1456540:intron | 30.0% | |
| TCCTTCTACCATTATTGAAT+TGG | - | tig0037557:5958-5977 | None:intergenic | 30.0% | |
| CAAATCAAACTACTTTAGCA+TGG | - | tig0037557:6030-6049 | None:intergenic | 30.0% | |
| CGAATAATATTTGGATGAGA+TGG | - | tig0037557:6243-6262 | None:intergenic | 30.0% | |
| ACATCCATACAAACTTCTTA+TGG | + | tig0037557:6406-6425 | Msa1456540:intron | 30.0% | |
| ACTTCCATAAGAAGTTTGTA+TGG | - | tig0037557:6413-6432 | None:intergenic | 30.0% | |
| GAACCATAGTAAGACATATA+AGG | - | tig0037557:7388-7407 | None:intergenic | 30.0% | |
| GTCGATGATATCAATCAAAA+TGG | - | tig0037557:7434-7453 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | tig0037557:7658-7677 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | + | tig0037557:7706-7725 | Msa1456540:intron | 30.0% | |
| !! | TTCAATTTTCTTTTGAAGGG+CGG | + | tig0037557:8193-8212 | Msa1456540:intron | 30.0% |
| ! | TTTGATATTGTTTCTCAAGC+CGG | - | tig0037557:8498-8517 | None:intergenic | 30.0% |
| !!! | GTCTGTCTCATTTTTTAAAG+AGG | + | tig0037557:8769-8788 | Msa1456540:intron | 30.0% |
| ACCTCTCAACAAAAATGTAT+CGG | - | tig0037557:8873-8892 | None:intergenic | 30.0% | |
| ATTGTATTTGTATCCTTGCA+GGG | + | tig0037557:9157-9176 | Msa1456540:intron | 30.0% | |
| TCATACACAGGAAAACAATT+TGG | + | tig0037557:9605-9624 | Msa1456540:intron | 30.0% | |
| GTTAGTGTGAATAACATGTT+TGG | + | tig0037557:9684-9703 | Msa1456540:intron | 30.0% | |
| GAATAACATGTTTGGTATCA+TGG | + | tig0037557:9692-9711 | Msa1456540:intron | 30.0% | |
| GTGATTAAGGATATGACAAA+TGG | + | tig0037557:9919-9938 | Msa1456540:CDS | 30.0% | |
| ATTAAGGATATGACAAATGG+AGG | + | tig0037557:9922-9941 | Msa1456540:CDS | 30.0% | |
| ! | ATGGTTGGTATACTTTGATT+AGG | + | tig0037557:10140-10159 | Msa1456540:intron | 30.0% |
| ! | TGGTTGGTATACTTTGATTA+GGG | + | tig0037557:10141-10160 | Msa1456540:intron | 30.0% |
| TCATAAGGTCTTAAAGTCAA+TGG | - | tig0037557:10210-10229 | None:intergenic | 30.0% | |
| AGACCTTATGACATTCTAAA+AGG | + | tig0037557:10219-10238 | Msa1456540:CDS | 30.0% | |
| !!! | TTGCCTTTTAGAATGTCATA+AGG | - | tig0037557:10225-10244 | None:intergenic | 30.0% |
| !!! | ACACTTGTACTTTTTTAACC+CGG | + | tig0037557:10489-10508 | Msa1456540:intron | 30.0% |
| TTTGCACACGTCAAATATAT+AGG | + | tig0037557:10556-10575 | Msa1456540:intron | 30.0% | |
| TTGCACACGTCAAATATATA+GGG | + | tig0037557:10557-10576 | Msa1456540:intron | 30.0% | |
| !!! | TTTTGACTTTTGAGGTAACA+AGG | - | tig0037557:11004-11023 | None:intergenic | 30.0% |
| !!! | AGAAAGAGTTTTGACTTTTG+AGG | - | tig0037557:11012-11031 | None:intergenic | 30.0% |
| TATGGACTTGGCACATTATT+GGG | - | tig0037557:1927-1946 | None:intergenic | 35.0% | |
| TTATGGACTTGGCACATTAT+TGG | - | tig0037557:1928-1947 | None:intergenic | 35.0% | |
| ATAATGTGCCAAGTCCATAA+TGG | + | tig0037557:1928-1947 | Msa1456540:five_prime_UTR | 35.0% | |
| TTGGTAAACCATTATGGACT+TGG | - | tig0037557:1939-1958 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTGGTAAACCATTA+TGG | - | tig0037557:1945-1964 | None:intergenic | 35.0% |
| ACCAAAACAGCTGTGTTTAA+TGG | + | tig0037557:1954-1973 | Msa1456540:five_prime_UTR | 35.0% | |
| ! | TCCATTAAACACAGCTGTTT+TGG | - | tig0037557:1958-1977 | None:intergenic | 35.0% |
| TGCCAAATGACCTGTTAAAA+CGG | - | tig0037557:2015-2034 | None:intergenic | 35.0% | |
| GTAGAGTTAATCTTAGACTG+TGG | - | tig0037557:2040-2059 | None:intergenic | 35.0% | |
| GCTGCAATATGCAAAAAATC+AGG | + | tig0037557:2291-2310 | Msa1456540:intron | 35.0% | |
| TTCAACTTCCTCTATGACAA+GGG | - | tig0037557:2322-2341 | None:intergenic | 35.0% | |
| ATTCAACTTCCTCTATGACA+AGG | - | tig0037557:2323-2342 | None:intergenic | 35.0% | |
| AATTAGACCCACCTAAATCA+TGG | + | tig0037557:2340-2359 | Msa1456540:CDS | 35.0% | |
| ATTAGACCCACCTAAATCAT+GGG | + | tig0037557:2341-2360 | Msa1456540:CDS | 35.0% | |
| ATTCGTACTTCCCATGATTT+AGG | - | tig0037557:2354-2373 | None:intergenic | 35.0% | |
| !! | TGATGTCACCTTTTGGAAAA+TGG | + | tig0037557:2404-2423 | Msa1456540:CDS | 35.0% |
| ! | GCTAGGTTTCCAAGAATTTT+AGG | + | tig0037557:2569-2588 | Msa1456540:CDS | 35.0% |
| TACAATTAAGTACAGAGTCG+TGG | + | tig0037557:2809-2828 | Msa1456540:intron | 35.0% | |
| AATGTGGAAGAAGTGAAAGA+GGG | + | tig0037557:2846-2865 | Msa1456540:CDS | 35.0% | |
| AGCAACAATTGCACAAAGTT+TGG | + | tig0037557:2933-2952 | Msa1456540:CDS | 35.0% | |
| GCAACAATTGCACAAAGTTT+GGG | + | tig0037557:2934-2953 | Msa1456540:CDS | 35.0% | |
| AGCTACTAACACCCAATAAA+TGG | - | tig0037557:3031-3050 | None:intergenic | 35.0% | |
| ! | TAGCTTTTCTGAGTATACAG+TGG | + | tig0037557:3046-3065 | Msa1456540:CDS | 35.0% |
| TTTCGTATCCTTGATTCTAC+CGG | + | tig0037557:3329-3348 | Msa1456540:intron | 35.0% | |
| TAATTCCTTGTGCTTGAAAC+CGG | - | tig0037557:3382-3401 | None:intergenic | 35.0% | |
| TGAATTGAAATGTGTGTGTG+GGG | + | tig0037557:3443-3462 | Msa1456540:intron | 35.0% | |
| AGCTTGCATTACAAATTGGA+AGG | - | tig0037557:3677-3696 | None:intergenic | 35.0% | |
| CAAGAGCTTGCATTACAAAT+TGG | - | tig0037557:3681-3700 | None:intergenic | 35.0% | |
| AAAATGGTAGAGTTTCGTGA+CGG | - | tig0037557:3793-3812 | None:intergenic | 35.0% | |
| ! | CGAAACTCTACCATTTTATG+TGG | + | tig0037557:3796-3815 | Msa1456540:intron | 35.0% |
| TGGAAAATGTTAACTAGTGC+CGG | + | tig0037557:3937-3956 | Msa1456540:intron | 35.0% | |
| CTGGTTAAGGAATCCAAAAA+AGG | - | tig0037557:4061-4080 | None:intergenic | 35.0% | |
| AATTATTGGGTCCTCTTAAC+CGG | - | tig0037557:4095-4114 | None:intergenic | 35.0% | |
| GCCAAGATCATGTATCTATT+TGG | + | tig0037557:4665-4684 | Msa1456540:intron | 35.0% | |
| CCCAAATAGATACATGATCT+TGG | - | tig0037557:4669-4688 | None:intergenic | 35.0% | |
| ! | TTTGGCTAACACATTTTCAG+AGG | + | tig0037557:4760-4779 | Msa1456540:intron | 35.0% |
| ! | ACACATTTTCAGAGGTTTTG+CGG | + | tig0037557:4768-4787 | Msa1456540:intron | 35.0% |
| TTAAGAGCTATTCGTAGAAG+TGG | - | tig0037557:4845-4864 | None:intergenic | 35.0% | |
| ATAATAAAAGGTCCCGGTAT+AGG | - | tig0037557:4881-4900 | None:intergenic | 35.0% | |
| GAAGTCATAATAAAAGGTCC+CGG | - | tig0037557:4887-4906 | None:intergenic | 35.0% | |
| CGAGCAGAAGTCATAATAAA+AGG | - | tig0037557:4893-4912 | None:intergenic | 35.0% | |
| ATTCGAACAGTAGTAGATCA+AGG | - | tig0037557:4923-4942 | None:intergenic | 35.0% | |
| TCATGCTAAATCAAAACACG+TGG | + | tig0037557:5008-5027 | Msa1456540:intron | 35.0% | |
| !! | TACTATAAGGGCTTTAAAGG+GGG | + | tig0037557:5166-5185 | Msa1456540:intron | 35.0% |
| AAATCCTATACCTTGAGGAT+AGG | + | tig0037557:5205-5224 | Msa1456540:intron | 35.0% | |
| GAACACAAATATCGGAGAAT+TGG | + | tig0037557:5253-5272 | Msa1456540:intron | 35.0% | |
| GATCAATTTCAAACATTGGG+GGG | - | tig0037557:5287-5306 | None:intergenic | 35.0% | |
| GTTAGTGTTTATTGATGCCA+AGG | + | tig0037557:5378-5397 | Msa1456540:intron | 35.0% | |
| TCCATTCTCTCAAAATACCT+TGG | - | tig0037557:5398-5417 | None:intergenic | 35.0% | |
| TGTGAAGTGGTGTTTCATTA+TGG | + | tig0037557:5486-5505 | Msa1456540:intron | 35.0% | |
| ATTATGTCGTGTTTCATGTG+AGG | + | tig0037557:5546-5565 | Msa1456540:intron | 35.0% | |
| GGCAACTGAGTAATATTATG+AGG | + | tig0037557:5595-5614 | Msa1456540:intron | 35.0% | |
| ATTGAATTGGTTGCAAAGAG+TGG | - | tig0037557:5945-5964 | None:intergenic | 35.0% | |
| TCAATAATGGTAGAAGGATG+AGG | + | tig0037557:5960-5979 | Msa1456540:intron | 35.0% | |
| AGATTTGCAATAAGTGGCTT+TGG | + | tig0037557:6092-6111 | Msa1456540:intron | 35.0% | |
| CGGGTATGATATTGTATCTT+TGG | + | tig0037557:6261-6280 | Msa1456540:intron | 35.0% | |
| CTCTTAAATGATTCAGTTCG+TGG | - | tig0037557:7256-7275 | None:intergenic | 35.0% | |
| TCTTAGATCATCGAGTTCAA+TGG | - | tig0037557:7335-7354 | None:intergenic | 35.0% | |
| GACTATGTTACTCCATAAAG+TGG | - | tig0037557:7467-7486 | None:intergenic | 35.0% | |
| TCGTATCTTTCACAGACTAT+AGG | + | tig0037557:7875-7894 | Msa1456540:intron | 35.0% | |
| ACGTGTAGTTTATAGTTTCG+CGG | + | tig0037557:8342-8361 | Msa1456540:intron | 35.0% | |
| TAATGCTTTCTAATATGGGG+TGG | + | tig0037557:8401-8420 | Msa1456540:intron | 35.0% | |
| ATGCTTTCTAATTTATGCGC+CGG | + | tig0037557:8476-8495 | Msa1456540:intron | 35.0% | |
| ! | ACCGATACATTTTTGTTGAG+AGG | + | tig0037557:8869-8888 | Msa1456540:intron | 35.0% |
| AAAACAACCATGACAACCAA+CGG | + | tig0037557:8989-9008 | Msa1456540:intron | 35.0% | |
| CATTGTATTTGTATCCTTGC+AGG | + | tig0037557:9156-9175 | Msa1456540:intron | 35.0% | |
| !! | TATAGGCGTTGATCTAAATC+AGG | + | tig0037557:9455-9474 | Msa1456540:CDS | 35.0% |
| ! | TTTTCTTGCTCATCATACAC+AGG | + | tig0037557:9593-9612 | Msa1456540:intron | 35.0% |
| TTAGTAGGAATTGAATTCGG+TGG | + | tig0037557:9777-9796 | Msa1456540:intron | 35.0% | |
| ! | TTTTCTTTCCCCACACTTAT+AGG | + | tig0037557:9897-9916 | Msa1456540:intron | 35.0% |
| CTTAATCACCTATAAGTGTG+GGG | - | tig0037557:9908-9927 | None:intergenic | 35.0% | |
| CCTTAATCACCTATAAGTGT+GGG | - | tig0037557:9909-9928 | None:intergenic | 35.0% | |
| TCCTTAATCACCTATAAGTG+TGG | - | tig0037557:9910-9929 | None:intergenic | 35.0% | |
| GATTATTGCTTCGAATGCAT+AGG | + | tig0037557:9949-9968 | Msa1456540:CDS | 35.0% | |
| ATTAAAAGCCTCTGCCATTA+AGG | - | tig0037557:9983-10002 | None:intergenic | 35.0% | |
| ! | GTTGTTGTCATTTCTGTTAC+AGG | + | tig0037557:10841-10860 | Msa1456540:intron | 35.0% |
| TCTGTTACAGGAACTTAACT+TGG | + | tig0037557:10853-10872 | Msa1456540:intron | 35.0% | |
| ! | TTACAGGAACTTAACTTGGA+TGG | + | tig0037557:10857-10876 | Msa1456540:intron | 35.0% |
| ! | AGAGTATCCGTTGCATTATA+AGG | + | tig0037557:10945-10964 | Msa1456540:CDS | 35.0% |
| TATCCGTTGCATTATAAGGA+TGG | + | tig0037557:10949-10968 | Msa1456540:CDS | 35.0% | |
| GATCCATCCTTATAATGCAA+CGG | - | tig0037557:10955-10974 | None:intergenic | 35.0% | |
| ! | CATTTAGCTCCAACATATGA+TGG | + | tig0037557:11034-11053 | Msa1456540:three_prime_UTR | 35.0% |
| ATGCTTAAAAAGGCTGGTAG+TGG | + | tig0037557:1846-1865 | Msa1456540:five_prime_UTR | 40.0% | |
| TTGGCACATTATTGGGCTAT+TGG | - | tig0037557:1920-1939 | None:intergenic | 40.0% | |
| !! | TCCTATCAACCCGTTTTAAC+AGG | + | tig0037557:2002-2021 | Msa1456540:five_prime_UTR | 40.0% |
| !! | ACCTGTTAAAACGGGTTGAT+AGG | - | tig0037557:2006-2025 | None:intergenic | 40.0% |
| !! | ACCCGTTTTAACAGGTCATT+TGG | + | tig0037557:2010-2029 | Msa1456540:five_prime_UTR | 40.0% |
| GCCAAATGACCTGTTAAAAC+GGG | - | tig0037557:2014-2033 | None:intergenic | 40.0% | |
| CTTGTAACGCTTCTGATGAT+CGG | - | tig0037557:2127-2146 | None:intergenic | 40.0% | |
| !! | GATCATCAGAAGCGTTACAA+GGG | + | tig0037557:2126-2145 | Msa1456540:CDS | 40.0% |
| AGCAAGCCAATAAGATGCAA+AGG | + | tig0037557:2157-2176 | Msa1456540:CDS | 40.0% | |
| TCAACTTCCTCTATGACAAG+GGG | - | tig0037557:2321-2340 | None:intergenic | 40.0% | |
| GTACTTCCCATGATTTAGGT+GGG | - | tig0037557:2350-2369 | None:intergenic | 40.0% | |
| ATGCAGAGTTTGTGGATTTG+TGG | - | tig0037557:2445-2464 | None:intergenic | 40.0% | |
| ATTCTTGGAAACCTAGCAGT+AGG | - | tig0037557:2566-2585 | None:intergenic | 40.0% | |
| GCTTCGTGTCCTAAAATTCT+TGG | - | tig0037557:2581-2600 | None:intergenic | 40.0% | |
| !!! | AATTTTAGGACACGAAGCTG+TGG | + | tig0037557:2583-2602 | Msa1456540:CDS | 40.0% |
| !!! | ATTTTAGGACACGAAGCTGT+GGG | + | tig0037557:2584-2603 | Msa1456540:CDS | 40.0% |
| GAATGTGGAAGAAGTGAAAG+AGG | + | tig0037557:2845-2864 | Msa1456540:CDS | 40.0% | |
| CTATGCATTCACCACAGTTT+GGG | - | tig0037557:2896-2915 | None:intergenic | 40.0% | |
| TCTATGCATTCACCACAGTT+TGG | - | tig0037557:2897-2916 | None:intergenic | 40.0% | |
| AGATGGAACAAGCAGGTTTA+GGG | + | tig0037557:2983-3002 | Msa1456540:CDS | 40.0% | |
| AGAAGTGGTGCACCATTTAT+TGG | + | tig0037557:3016-3035 | Msa1456540:CDS | 40.0% | |
| GAAGTGGTGCACCATTTATT+GGG | + | tig0037557:3017-3036 | Msa1456540:CDS | 40.0% | |
| ! | CTTTTCTGAGTATACAGTGG+TGG | + | tig0037557:3049-3068 | Msa1456540:CDS | 40.0% |
| AAGTCTAACCGGTAGAATCA+AGG | - | tig0037557:3340-3359 | None:intergenic | 40.0% | |
| !! | TAATACCGGTTTCAAGCACA+AGG | + | tig0037557:3374-3393 | Msa1456540:intron | 40.0% |
| GAATTGAAATGTGTGTGTGG+GGG | + | tig0037557:3444-3463 | Msa1456540:intron | 40.0% | |
| AATTGAAATGTGTGTGTGGG+GGG | + | tig0037557:3445-3464 | Msa1456540:intron | 40.0% | |
| AACAAAGAAAGTGGGTGACA+TGG | - | tig0037557:3554-3573 | None:intergenic | 40.0% | |
| AAATGGTAGAGTTTCGTGAC+GGG | - | tig0037557:3792-3811 | None:intergenic | 40.0% | |
| TATTTGTCGCAATCTCCATG+AGG | + | tig0037557:3825-3844 | Msa1456540:intron | 40.0% | |
| GGAAAATGTTAACTAGTGCC+GGG | + | tig0037557:3938-3957 | Msa1456540:intron | 40.0% | |
| ATATTTGCTCCCTTAACCAG+TGG | - | tig0037557:3964-3983 | None:intergenic | 40.0% | |
| AGAGGACCCAATAATTGAGT+TGG | + | tig0037557:4099-4118 | Msa1456540:intron | 40.0% | |
| GAGGACCCAATAATTGAGTT+GGG | + | tig0037557:4100-4119 | Msa1456540:intron | 40.0% | |
| ATTGCCTCAATGTCGTTGAT+CGG | + | tig0037557:4287-4306 | Msa1456540:intron | 40.0% | |
| TCTCAAAACCAGTAACAAGG+AGG | - | tig0037557:4437-4456 | None:intergenic | 40.0% | |
| ! | TGATCTCATCCAAGTGTTGT+TGG | + | tig0037557:4629-4648 | Msa1456540:intron | 40.0% |
| ! | GATCTCATCCAAGTGTTGTT+GGG | + | tig0037557:4630-4649 | Msa1456540:intron | 40.0% |
| ! | ATCTCATCCAAGTGTTGTTG+GGG | + | tig0037557:4631-4650 | Msa1456540:intron | 40.0% |
| TATCATACCCCAACAACACT+TGG | - | tig0037557:4641-4660 | None:intergenic | 40.0% | |
| GTAGTCAAGGAAACAAACTC+TGG | + | tig0037557:4707-4726 | Msa1456540:intron | 40.0% | |
| TTCGTAGAAGTGGTAGGATA+GGG | - | tig0037557:4835-4854 | None:intergenic | 40.0% | |
| ATTCGTAGAAGTGGTAGGAT+AGG | - | tig0037557:4836-4855 | None:intergenic | 40.0% | |
| GTGACAATGCTACTGTACTT+AGG | - | tig0037557:4975-4994 | None:intergenic | 40.0% | |
| TGCTAAATCAAAACACGTGG+AGG | + | tig0037557:5011-5030 | Msa1456540:intron | 40.0% | |
| GCTAAATCAAAACACGTGGA+GGG | + | tig0037557:5012-5031 | Msa1456540:intron | 40.0% | |
| AGTTTAGCATATCTTTGCCC+TGG | + | tig0037557:5060-5079 | Msa1456540:intron | 40.0% | |
| AGAGTCAACATACTGATCCA+GGG | - | tig0037557:5080-5099 | None:intergenic | 40.0% | |
| CTGAGAGACAAGCTCATTAA+CGG | + | tig0037557:5113-5132 | Msa1456540:intron | 40.0% | |
| !! | GCCAAGGTATTTTGAGAGAA+TGG | + | tig0037557:5394-5413 | Msa1456540:intron | 40.0% |
| GAGAATGGATCAGATAACCT+TGG | + | tig0037557:5409-5428 | Msa1456540:intron | 40.0% | |
| TCATTCCAACACACTCCTTA+GGG | - | tig0037557:5438-5457 | None:intergenic | 40.0% | |
| GTTGGAATGAGAAGGATAAG+AGG | + | tig0037557:5448-5467 | Msa1456540:intron | 40.0% | |
| ! | ACCACTTCACAGTTTTTGTG+TGG | - | tig0037557:5477-5496 | None:intergenic | 40.0% |
| ATGTGAGGATATGCGAGAAT+TGG | + | tig0037557:5561-5580 | Msa1456540:intron | 40.0% | |
| TGTGAGGATATGCGAGAATT+GGG | + | tig0037557:5562-5581 | Msa1456540:intron | 40.0% | |
| TAGAAGGATGAGGAAAGTAG+AGG | + | tig0037557:5970-5989 | Msa1456540:intron | 40.0% | |
| AGAAGGATGAGGAAAGTAGA+GGG | + | tig0037557:5971-5990 | Msa1456540:intron | 40.0% | |
| GTTATATTGTTGACATGCGC+CGG | - | tig0037557:7196-7215 | None:intergenic | 40.0% | |
| AATGATTCAGTTCGTGGTAG+TGG | - | tig0037557:7250-7269 | None:intergenic | 40.0% | |
| ! | ATGGGTCAGTTATTTCGAGA+CGG | - | tig0037557:7514-7533 | None:intergenic | 40.0% |
| TGGGACGGATGTAGTATTTA+CGG | + | tig0037557:7721-7740 | Msa1456540:intron | 40.0% | |
| GCAACACTACCATCTCAATA+AGG | + | tig0037557:7750-7769 | Msa1456540:intron | 40.0% | |
| TGGTGGAAACCTTATTGAGA+TGG | - | tig0037557:7762-7781 | None:intergenic | 40.0% | |
| CGTGTAGTTTATAGTTTCGC+GGG | + | tig0037557:8343-8362 | Msa1456540:intron | 40.0% | |
| !! | CGCGGGATAATTTGTTAATG+TGG | + | tig0037557:8360-8379 | Msa1456540:intron | 40.0% |
| AAACAACCATGACAACCAAC+GGG | + | tig0037557:8990-9009 | Msa1456540:intron | 40.0% | |
| ATTTGTATCCTTGCAGGGAT+AGG | + | tig0037557:9162-9181 | Msa1456540:intron | 40.0% | |
| TTTGTATCCTTGCAGGGATA+GGG | + | tig0037557:9163-9182 | Msa1456540:intron | 40.0% | |
| TGTAGAAAAAGGAACCACAG+TGG | + | tig0037557:9206-9225 | Msa1456540:CDS | 40.0% | |
| !!! | GAACCACAGTGGCTATTTTT+GGG | + | tig0037557:9217-9236 | Msa1456540:CDS | 40.0% |
| CAAATCTGAATGAGTCCTCT+AGG | - | tig0037557:9269-9288 | None:intergenic | 40.0% | |
| !!! | AGCGAACCTTGAGTTTTGAA+TGG | + | tig0037557:9386-9405 | Msa1456540:intron | 40.0% |
| CGAGGAGCTTCAAAGATTAT+AGG | + | tig0037557:9438-9457 | Msa1456540:CDS | 40.0% | |
| TACAGATTTGTCGTTGTAGG+TGG | - | tig0037557:9654-9673 | None:intergenic | 40.0% | |
| GCTTACAGATTTGTCGTTGT+AGG | - | tig0037557:9657-9676 | None:intergenic | 40.0% | |
| ! | TGAATTCGGTGGTATAGTCT+AGG | + | tig0037557:9788-9807 | Msa1456540:intron | 40.0% |
| ! | GAATTCGGTGGTATAGTCTA+GGG | + | tig0037557:9789-9808 | Msa1456540:intron | 40.0% |
| CCCACACTTATAGGTGATTA+AGG | + | tig0037557:9906-9925 | Msa1456540:intron | 40.0% | |
| TGGTATACTTTGATTAGGGC+TGG | + | tig0037557:10145-10164 | Msa1456540:intron | 40.0% | |
| GGTATACTTTGATTAGGGCT+GGG | + | tig0037557:10146-10165 | Msa1456540:intron | 40.0% | |
| GTATACTTTGATTAGGGCTG+GGG | + | tig0037557:10147-10166 | Msa1456540:intron | 40.0% | |
| TATACTTTGATTAGGGCTGG+GGG | + | tig0037557:10148-10167 | Msa1456540:intron | 40.0% | |
| ATAATTGGGGTGGAAATGCA+TGG | + | tig0037557:10180-10199 | Msa1456540:CDS | 40.0% | |
| CTAAAAGGCAAAACCATCAC+CGG | + | tig0037557:10234-10253 | Msa1456540:CDS | 40.0% | |
| TGGTTTCAAGCCTCCAAATA+GGG | - | tig0037557:10262-10281 | None:intergenic | 40.0% | |
| TTGGTTTCAAGCCTCCAAAT+AGG | - | tig0037557:10263-10282 | None:intergenic | 40.0% | |
| TAAGTACTTCTGAGCAAGGA+GGG | - | tig0037557:10298-10317 | None:intergenic | 40.0% | |
| TGTCTAAGTACTTCTGAGCA+AGG | - | tig0037557:10302-10321 | None:intergenic | 40.0% | |
| !! | GCTTTTGACTATCTCCTTCA+AGG | + | tig0037557:10920-10939 | Msa1456540:CDS | 40.0% |
| AACGGATACTCTTTCCTTGA+AGG | - | tig0037557:10937-10956 | None:intergenic | 40.0% | |
| CGAAAGACCTATTTAAGCCT+TGG | - | tig0037557:11120-11139 | None:intergenic | 40.0% | |
| !! | AAAAGGCTGGTAGTGGTAGT+TGG | + | tig0037557:1853-1872 | Msa1456540:five_prime_UTR | 45.0% |
| !! | CGATCATCAGAAGCGTTACA+AGG | + | tig0037557:2125-2144 | Msa1456540:CDS | 45.0% |
| CGTACTTCCCATGATTTAGG+TGG | - | tig0037557:2351-2370 | None:intergenic | 45.0% | |
| TCCAAAAGGTGACATCAGAG+TGG | - | tig0037557:2401-2420 | None:intergenic | 45.0% | |
| !!! | TTTTTCAGGCACCTACTGCT+AGG | + | tig0037557:2552-2571 | Msa1456540:intron | 45.0% |
| !!! | TTTTAGGACACGAAGCTGTG+GGG | + | tig0037557:2585-2604 | Msa1456540:CDS | 45.0% |
| TCTCTTGGCATGTCAAGGAT+CGG | - | tig0037557:2966-2985 | None:intergenic | 45.0% | |
| ATCCTTGACATGCCAAGAGA+TGG | + | tig0037557:2966-2985 | Msa1456540:CDS | 45.0% | |
| TTCCATCTCTTGGCATGTCA+AGG | - | tig0037557:2971-2990 | None:intergenic | 45.0% | |
| AACCTGCTTGTTCCATCTCT+TGG | - | tig0037557:2981-3000 | None:intergenic | 45.0% | |
| GAGATGGAACAAGCAGGTTT+AGG | + | tig0037557:2982-3001 | Msa1456540:CDS | 45.0% | |
| AGCAGGTTTAGGGACATGAA+AGG | + | tig0037557:2993-3012 | Msa1456540:CDS | 45.0% | |
| TAGGGACATGAAAGGAGAAG+TGG | + | tig0037557:3001-3020 | Msa1456540:CDS | 45.0% | |
| ! | AGCAAGCAAGCCTTATCAAG+AGG | - | tig0037557:3110-3129 | None:intergenic | 45.0% |
| !! | TGAAAGGTTAGCCTAACCTG+TGG | - | tig0037557:3147-3166 | None:intergenic | 45.0% |
| GAGCTTGTACAACAAGTTGC+AGG | - | tig0037557:3583-3602 | None:intergenic | 45.0% | |
| ! | GCTAATGACGGAGACAACAT+CGG | - | tig0037557:3854-3873 | None:intergenic | 45.0% |
| TGTTCCGATCAACGACATTG+AGG | - | tig0037557:4294-4313 | None:intergenic | 45.0% | |
| GAAGAGATCCTCCTTGTTAC+TGG | + | tig0037557:4426-4445 | Msa1456540:intron | 45.0% | |
| TCGTAGAAGTGGTAGGATAG+GGG | - | tig0037557:4834-4853 | None:intergenic | 45.0% | |
| GAGCTATTCGTAGAAGTGGT+AGG | - | tig0037557:4841-4860 | None:intergenic | 45.0% | |
| !! | GGTTGTCATAGAGTACTGAG+CGG | - | tig0037557:4954-4973 | None:intergenic | 45.0% |
| GAGAGTCAACATACTGATCC+AGG | - | tig0037557:5081-5100 | None:intergenic | 45.0% | |
| GATGCCTATCCTCAAGGTAT+AGG | - | tig0037557:5212-5231 | None:intergenic | 45.0% | |
| CCATTAGATGCCTATCCTCA+AGG | - | tig0037557:5218-5237 | None:intergenic | 45.0% | |
| CCTTGAGGATAGGCATCTAA+TGG | + | tig0037557:5215-5234 | Msa1456540:intron | 45.0% | |
| AGATAACCTTGGCATCCCTA+AGG | + | tig0037557:5420-5439 | Msa1456540:intron | 45.0% | |
| CTCATTCCAACACACTCCTT+AGG | - | tig0037557:5439-5458 | None:intergenic | 45.0% | |
| ! | AGGAGTGTGTTGGAATGAGA+AGG | + | tig0037557:5440-5459 | Msa1456540:intron | 45.0% |
| GCCACACAAAAACTGTGAAG+TGG | + | tig0037557:5473-5492 | Msa1456540:intron | 45.0% | |
| ! | TGCTGCTTACATGTGTGTGT+GGG | + | tig0037557:6159-6178 | Msa1456540:intron | 45.0% |
| ! | GTCAGTTATTTCGAGACGGA+GGG | - | tig0037557:7510-7529 | None:intergenic | 45.0% |
| ACTGGATGTAGACGTAGTGT+TGG | - | tig0037557:9033-9052 | None:intergenic | 45.0% | |
| TTGTATCCTTGCAGGGATAG+GGG | + | tig0037557:9164-9183 | Msa1456540:intron | 45.0% | |
| !! | AAGGTGGCGGATGTAGAAAA+AGG | + | tig0037557:9195-9214 | Msa1456540:CDS | 45.0% |
| !! | GGAACCACAGTGGCTATTTT+TGG | + | tig0037557:9216-9235 | Msa1456540:CDS | 45.0% |
| AAGCCCAAAAATAGCCACTG+TGG | - | tig0037557:9223-9242 | None:intergenic | 45.0% | |
| !!! | ACAGTGGCTATTTTTGGGCT+TGG | + | tig0037557:9222-9241 | Msa1456540:CDS | 45.0% |
| !!! | ATTTTTGGGCTTGGTGCTGT+AGG | + | tig0037557:9231-9250 | Msa1456540:CDS | 45.0% |
| GATTTGTCGTTGTAGGTGGA+GGG | - | tig0037557:9650-9669 | None:intergenic | 45.0% | |
| AGATTTGTCGTTGTAGGTGG+AGG | - | tig0037557:9651-9670 | None:intergenic | 45.0% | |
| CAACGACAAATCTGTAAGCG+AGG | + | tig0037557:9658-9677 | Msa1456540:CDS | 45.0% | |
| TTGCTTCGAATGCATAGGCT+TGG | + | tig0037557:9954-9973 | Msa1456540:CDS | 45.0% | |
| CATAGGCTTGGCATCCTTAA+TGG | + | tig0037557:9966-9985 | Msa1456540:CDS | 45.0% | |
| TGGGGGAAAACGGTGATAAT+TGG | + | tig0037557:10165-10184 | Msa1456540:CDS | 45.0% | |
| GGGGGAAAACGGTGATAATT+GGG | + | tig0037557:10166-10185 | Msa1456540:CDS | 45.0% | |
| GGGGAAAACGGTGATAATTG+GGG | + | tig0037557:10167-10186 | Msa1456540:CDS | 45.0% | |
| GAAAACGGTGATAATTGGGG+TGG | + | tig0037557:10170-10189 | Msa1456540:CDS | 45.0% | |
| ! | AGGAGGGGAAGATCAGATTT+TGG | - | tig0037557:10282-10301 | None:intergenic | 45.0% |
| AAGTACTTCTGAGCAAGGAG+GGG | - | tig0037557:10297-10316 | None:intergenic | 45.0% | |
| CTAAGTACTTCTGAGCAAGG+AGG | - | tig0037557:10299-10318 | None:intergenic | 45.0% | |
| GGATGGCTTCATATCACAAG+AGG | + | tig0037557:10874-10893 | Msa1456540:CDS | 45.0% | |
| TGGCTTCATATCACAAGAGG+TGG | + | tig0037557:10877-10896 | Msa1456540:CDS | 45.0% | |
| GGCTTCATATCACAAGAGGT+GGG | + | tig0037557:10878-10897 | Msa1456540:CDS | 45.0% | |
| !! | TTTATAAAAATTTAGTAAAA+AGG | + | tig0037557:3407-3426 | Msa1456540:intron | 5.0% |
| !!! | AATATAATTTTTAAAAAATG+GGG | - | tig0037557:6302-6321 | None:intergenic | 5.0% |
| !!! | AATTTTAAACATATATAAAA+AGG | - | tig0037557:6899-6918 | None:intergenic | 5.0% |
| !! | AAATAAAAATAAAAATTATC+CGG | + | tig0037557:7174-7193 | Msa1456540:intron | 5.0% |
| !!! | AAAGATTTTTTTTTTTTTAT+TGG | + | tig0037557:9055-9074 | Msa1456540:intron | 5.0% |
| !!! | AAGATTTTTTTTTTTTTATT+GGG | + | tig0037557:9056-9075 | Msa1456540:intron | 5.0% |
| AGGTGAACCCCTTGTCATAG+AGG | + | tig0037557:2311-2330 | Msa1456540:CDS | 50.0% | |
| ! | GCCACTCTGATGTCACCTTT+TGG | + | tig0037557:2397-2416 | Msa1456540:CDS | 50.0% |
| ! | TACAGAGTCGTGGAGAGTGT+AGG | + | tig0037557:2819-2838 | Msa1456540:intron | 50.0% |
| ! | ACAGAGTCGTGGAGAGTGTA+GGG | + | tig0037557:2820-2839 | Msa1456540:intron | 50.0% |
| AGAAGTGAAAGAGGGCGACT+TGG | + | tig0037557:2854-2873 | Msa1456540:CDS | 50.0% | |
| TGCATTCACCACAGTTTGGG+AGG | - | tig0037557:2893-2912 | None:intergenic | 50.0% | |
| TGCCAAGAGATGGAACAAGC+AGG | + | tig0037557:2976-2995 | Msa1456540:CDS | 50.0% | |
| !! | AGTGGTGGATGTAACCCATG+TGG | + | tig0037557:3064-3083 | Msa1456540:CDS | 50.0% |
| ! | AAGGCTTGCTTGCTCAGTTG+CGG | + | tig0037557:3116-3135 | Msa1456540:CDS | 50.0% |
| TTGCGGTGTTTCCACAGGTT+AGG | + | tig0037557:3133-3152 | Msa1456540:intron | 50.0% | |
| !! | GTAGAGTTTCGTGACGGGTA+TGG | - | tig0037557:3787-3806 | None:intergenic | 50.0% |
| TGGATTCCTTAACCAGTGCC+CGG | + | tig0037557:4065-4084 | Msa1456540:intron | 50.0% | |
| TGCCGCATCTCTTCCTATAC+CGG | + | tig0037557:4865-4884 | Msa1456540:intron | 50.0% | |
| TCCCGGTATAGGAAGAGATG+CGG | - | tig0037557:4870-4889 | None:intergenic | 50.0% | |
| GAGGATATGCGAGAATTGGG+AGG | + | tig0037557:5565-5584 | Msa1456540:intron | 50.0% | |
| TGCGAGAATTGGGAGGCTTA+TGG | + | tig0037557:5572-5591 | Msa1456540:intron | 50.0% | |
| GCGAGAATTGGGAGGCTTAT+GGG | + | tig0037557:5573-5592 | Msa1456540:intron | 50.0% | |
| CGAGAATTGGGAGGCTTATG+GGG | + | tig0037557:5574-5593 | Msa1456540:intron | 50.0% | |
| AGGATGAGGAAAGTAGAGGG+TGG | + | tig0037557:5974-5993 | Msa1456540:intron | 50.0% | |
| GGATGAGGAAAGTAGAGGGT+GGG | + | tig0037557:5975-5994 | Msa1456540:intron | 50.0% | |
| !! | GTGCTGCTTACATGTGTGTG+TGG | + | tig0037557:6158-6177 | Msa1456540:intron | 50.0% |
| GCTGCTTACATGTGTGTGTG+GGG | + | tig0037557:6160-6179 | Msa1456540:intron | 50.0% | |
| ! | GGTCAGTTATTTCGAGACGG+AGG | - | tig0037557:7511-7530 | None:intergenic | 50.0% |
| TAATATGGGGTGGTCGCACA+TGG | + | tig0037557:8411-8430 | Msa1456540:intron | 50.0% | |
| ACAACCAACGGGTAGCACTT+AGG | + | tig0037557:9001-9020 | Msa1456540:intron | 50.0% | |
| GGCGCACCATTCAAAACTCA+AGG | - | tig0037557:9395-9414 | None:intergenic | 50.0% | |
| !!! | TGAGTTTTGAATGGTGCGCC+AGG | + | tig0037557:9395-9414 | Msa1456540:intron | 50.0% |
| CTTGGCATCCTTAATGGCAG+AGG | + | tig0037557:9972-9991 | Msa1456540:CDS | 50.0% | |
| TGATTAGGGCTGGGGGAAAA+CGG | + | tig0037557:10155-10174 | Msa1456540:intron | 50.0% | |
| ACCATCACCGGATCCCTATT+TGG | + | tig0037557:10246-10265 | Msa1456540:CDS | 50.0% | |
| TCCAAATAGGGATCCGGTGA+TGG | - | tig0037557:10250-10269 | None:intergenic | 50.0% | |
| ATCACCGGATCCCTATTTGG+AGG | + | tig0037557:10249-10268 | Msa1456540:CDS | 50.0% | |
| CAAGCCTCCAAATAGGGATC+CGG | - | tig0037557:10256-10275 | None:intergenic | 50.0% | |
| ! | ATCACAAGAGGTGGGCTTCA+AGG | + | tig0037557:10886-10905 | Msa1456540:CDS | 50.0% |
| ! | CAGAGTCGTGGAGAGTGTAG+GGG | + | tig0037557:2821-2840 | Msa1456540:intron | 55.0% |
| ! | GGAGAGTGTAGGGGAGAATG+TGG | + | tig0037557:2830-2849 | Msa1456540:CDS | 55.0% |
| CCACAGTTTGGGAGGAACAC+TGG | - | tig0037557:2885-2904 | None:intergenic | 55.0% | |
| CCAGTGTTCCTCCCAAACTG+TGG | + | tig0037557:2882-2901 | Msa1456540:CDS | 55.0% | |
| CTCAGTTGCGGTGTTTCCAC+AGG | + | tig0037557:3128-3147 | Msa1456540:CDS | 55.0% | |
| TGAAATGTGTGTGTGGGGGG+TGG | + | tig0037557:3448-3467 | Msa1456540:intron | 55.0% | |
| GAAATGTGTGTGTGGGGGGT+GGG | + | tig0037557:3449-3468 | Msa1456540:intron | 55.0% | |
| AAATGTGTGTGTGGGGGGTG+GGG | + | tig0037557:3450-3469 | Msa1456540:intron | 55.0% | |
| ! | ACGGGTATGGTGGAGGCTTA+GGG | - | tig0037557:3774-3793 | None:intergenic | 55.0% |
| !! | TTTCGTGACGGGTATGGTGG+AGG | - | tig0037557:3781-3800 | None:intergenic | 55.0% |
| !! | GAGTTTCGTGACGGGTATGG+TGG | - | tig0037557:3784-3803 | None:intergenic | 55.0% |
| AGACAACATCGGCGACCTCA+TGG | - | tig0037557:3843-3862 | None:intergenic | 55.0% | |
| GGATTCCTTAACCAGTGCCC+GGG | + | tig0037557:4066-4085 | Msa1456540:intron | 55.0% | |
| GATTCCTTAACCAGTGCCCG+GGG | + | tig0037557:4067-4086 | Msa1456540:intron | 55.0% | |
| GCCGCATCTCTTCCTATACC+GGG | + | tig0037557:4866-4885 | Msa1456540:intron | 55.0% | |
| CACACTCCTTAGGGATGCCA+AGG | - | tig0037557:5429-5448 | None:intergenic | 55.0% | |
| ! | GGCATCCCTAAGGAGTGTGT+TGG | + | tig0037557:5430-5449 | Msa1456540:intron | 55.0% |
| ! | GTGCTACCCGTTGGTTGTCA+TGG | - | tig0037557:8999-9018 | None:intergenic | 55.0% |
| GTCACCTAAGTGCTACCCGT+TGG | - | tig0037557:9008-9027 | None:intergenic | 55.0% | |
| AGGCTTGGCTGTAAGCCTAG+AGG | + | tig0037557:9251-9270 | Msa1456540:intron | 55.0% | |
| GCTTTGCTGCAACAGCAACC+TGG | - | tig0037557:9416-9435 | None:intergenic | 55.0% | |
| GCTGTTGCAGCAAAGCAACG+AGG | + | tig0037557:9420-9439 | Msa1456540:CDS | 55.0% | |
| ! | GACGGGTATGGTGGAGGCTT+AGG | - | tig0037557:3775-3794 | None:intergenic | 60.0% |
| ! | GTTAACTAGTGCCGGGCCAC+TGG | + | tig0037557:3945-3964 | Msa1456540:intron | 60.0% |
| ! | TAGTGCCGGGCCACTGGTTA+AGG | + | tig0037557:3951-3970 | Msa1456540:intron | 60.0% |
| ! | AGTGCCGGGCCACTGGTTAA+GGG | + | tig0037557:3952-3971 | Msa1456540:intron | 60.0% |
| TGCTCCCTTAACCAGTGGCC+CGG | - | tig0037557:3959-3978 | None:intergenic | 60.0% | |
| AAGCTGCCCCTATCCCTGCA+AGG | - | tig0037557:9173-9192 | None:intergenic | 60.0% | |
| TTGCAGGGATAGGGGCAGCT+TGG | + | tig0037557:9172-9191 | Msa1456540:intron | 60.0% | |
| AGGGATAGGGGCAGCTTGGA+AGG | + | tig0037557:9176-9195 | Msa1456540:intron | 60.0% | |
| GATAGGGGCAGCTTGGAAGG+TGG | + | tig0037557:9179-9198 | Msa1456540:CDS | 60.0% | |
| !! | TGGGCTTGGTGCTGTAGGCT+TGG | + | tig0037557:9236-9255 | Msa1456540:CDS | 60.0% |
| TTAACCAGTGCCCGGGGCAC+CGG | + | tig0037557:4073-4092 | Msa1456540:intron | 65.0% | |
| GTCCTCTTAACCGGTGCCCC+GGG | - | tig0037557:4086-4105 | None:intergenic | 65.0% | |
| GGTCCTCTTAACCGGTGCCC+CGG | - | tig0037557:4087-4106 | None:intergenic | 65.0% | |
| AGGGGCAGCTTGGAAGGTGG+CGG | + | tig0037557:9182-9201 | Msa1456540:CDS | 65.0% | |
| !! | GGTGCCCCGGGCACTGGTTA+AGG | - | tig0037557:4074-4093 | None:intergenic | 70.0% |
| TTAACCGGTGCCCCGGGCAC+TGG | - | tig0037557:4080-4099 | None:intergenic | 70.0% | |
| !! | TGCCCGGGGCACCGGTTAAG+AGG | + | tig0037557:4081-4100 | Msa1456540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0037557 | gene | 1832 | 11142 | 1832 | ID=Msa1456540;Name=Msa1456540 |
| tig0037557 | mRNA | 1832 | 11142 | 1832 | ID=Msa1456540-mRNA-1;Parent=Msa1456540;Name=Msa1456540-mRNA-1;_AED=0.16;_eAED=0.16;_QI=289|1|1|1|1|1|10|163|390 |
| tig0037557 | exon | 1832 | 2178 | 1832 | ID=Msa1456540-mRNA-1:exon:20752;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 2292 | 2434 | 2292 | ID=Msa1456540-mRNA-1:exon:20753;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 2560 | 2606 | 2560 | ID=Msa1456540-mRNA-1:exon:20754;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 2824 | 3149 | 2824 | ID=Msa1456540-mRNA-1:exon:20755;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 9178 | 9260 | 9178 | ID=Msa1456540-mRNA-1:exon:20756;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 9417 | 9492 | 9417 | ID=Msa1456540-mRNA-1:exon:20757;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 9615 | 9679 | 9615 | ID=Msa1456540-mRNA-1:exon:20758;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 9919 | 10014 | 9919 | ID=Msa1456540-mRNA-1:exon:20759;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 10162 | 10323 | 10162 | ID=Msa1456540-mRNA-1:exon:20760;Parent=Msa1456540-mRNA-1 |
| tig0037557 | exon | 10863 | 11142 | 10863 | ID=Msa1456540-mRNA-1:exon:20761;Parent=Msa1456540-mRNA-1 |
| tig0037557 | five_prime_UTR | 1832 | 2120 | 1832 | ID=Msa1456540-mRNA-1:five_prime_utr;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 2121 | 2178 | 2121 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 2292 | 2434 | 2292 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 2560 | 2606 | 2560 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 2824 | 3149 | 2824 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 9178 | 9260 | 9178 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 9417 | 9492 | 9417 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 9615 | 9679 | 9615 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 9919 | 10014 | 9919 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 10162 | 10323 | 10162 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | CDS | 10863 | 10979 | 10863 | ID=Msa1456540-mRNA-1:cds;Parent=Msa1456540-mRNA-1 |
| tig0037557 | three_prime_UTR | 10980 | 11142 | 10980 | ID=Msa1456540-mRNA-1:three_prime_utr;Parent=Msa1456540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
