AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1457550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457550 MtrunA17_Chr7g0270141 97.943 875 17 1 2 875 322 1196 0.0 1756
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457550 AT3G62360.2 62.301 878 320 5 2 875 327 1197 0.0 1128
Msa1457550 AT3G62360.1 60.242 908 320 6 2 875 327 1227 0.0 1113

Find 214 sgRNAs with CRISPR-Local

Find 899 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGTCTCGCCTCCTCTTTC+TGG 0.156683 tig0039039:+6295 Msa1457550:CDS
ATTGACTCATGTGTCTTCTT+TGG 0.185010 tig0039039:+4234 Msa1457550:CDS
TCTTCTATTGAAGCCATATT+TGG 0.188138 tig0039039:-1209 None:intergenic
CTCTTTCTGGTGTTCATATC+AGG 0.197336 tig0039039:+6308 Msa1457550:CDS
GCATTACAAGTTCAAGAAAT+TGG 0.201593 tig0039039:+1014 Msa1457550:CDS
CTTGAAGTTGATGTGGTTCC+CGG 0.219229 tig0039039:-12131 None:intergenic
ATGCTTCTTCCTTGCTTCTA+TGG 0.234325 tig0039039:-995 None:intergenic
TATAGAAACAACTCAGTATC+TGG 0.258710 tig0039039:+9054 Msa1457550:CDS
TTCAACTGAAACTCCTCCTT+TGG 0.261974 tig0039039:-11137 None:intergenic
TGCTCAGGTATTGCCAAATA+TGG 0.266920 tig0039039:+1196 Msa1457550:intron
GGACAAATAAATGTCCTTTC+CGG 0.267562 tig0039039:+4437 Msa1457550:CDS
GTTACTTACATGATGTTCTC+TGG 0.268353 tig0039039:-6111 None:intergenic
GGAGAAAAGCATCTTATTAA+AGG 0.271049 tig0039039:+4416 Msa1457550:CDS
AAAACTAAATTCATGTATTC+CGG 0.272345 tig0039039:-4211 None:intergenic
TCTTCCATGGTCACTGATTC+GGG 0.276213 tig0039039:-3899 None:intergenic
ATGCTATCAAAGTCGCTAAA+AGG 0.278501 tig0039039:+11251 Msa1457550:CDS
TTGACTCATGTGTCTTCTTT+GGG 0.279133 tig0039039:+4235 Msa1457550:CDS
GGCTTAGTCACTCTGTTATC+TGG 0.280904 tig0039039:+11109 Msa1457550:CDS
ATAAATTCTTACAGTGCTAT+TGG 0.282828 tig0039039:+11088 Msa1457550:intron
CTGTCTTTGAGTATTCTGTT+TGG 0.284849 tig0039039:+4576 Msa1457550:CDS
CAAGAAATTGGAGAATTATA+TGG 0.286191 tig0039039:+1026 Msa1457550:CDS
ATGATCTTTGTGGTTTAGTT+AGG 0.292647 tig0039039:+1249 Msa1457550:CDS
TTATCAATGTTAACTGTTAC+AGG 0.292767 tig0039039:+115 None:intergenic
CAGTGACCATGGAAGATAAT+TGG 0.300405 tig0039039:+3906 Msa1457550:CDS
TGTTAACTGTTACAGGTAAC+TGG 0.308644 tig0039039:+122 None:intergenic
ATCTTCCATGGTCACTGATT+CGG 0.315998 tig0039039:-3900 None:intergenic
TTTAATGTCTAGGTTCTTCC+TGG 0.320833 tig0039039:+2122 Msa1457550:intron
TGTCTTTGAGTATTCTGTTT+GGG 0.321332 tig0039039:+4577 Msa1457550:CDS
TTGTAGCCCATCCATCTAAA+AGG 0.322595 tig0039039:+4395 Msa1457550:intron
AACTGAGGATATCAAGGGTT+TGG 0.335214 tig0039039:+11424 Msa1457550:CDS
ACTTGGAAGAAGTTCGAAAT+TGG 0.340693 tig0039039:-11590 None:intergenic
TCCAGATTCTCTTTCTGTTA+AGG 0.346413 tig0039039:+11309 Msa1457550:CDS
CATCATTCACGTACTCTCAT+AGG 0.348595 tig0039039:+12261 Msa1457550:three_prime_UTR
CAAGCAATTGAGCTCGAATC+AGG 0.350823 tig0039039:+9569 Msa1457550:CDS
CATGAGTCCAGCAGCATTAT+CGG 0.352438 tig0039039:-2177 None:intergenic
GTATTTGATAGTTTGTTTCC+TGG 0.354735 tig0039039:+9093 Msa1457550:CDS
AGGCCACGCGAGTAGCTTAC+AGG 0.361880 tig0039039:+9615 Msa1457550:CDS
AAGAAACAAACAGATGGAAA+TGG 0.362628 tig0039039:+1419 Msa1457550:CDS
CATATATGTGTTGAATTTCC+CGG 0.363064 tig0039039:+4192 Msa1457550:CDS
TTTCCCGTGGGACTTGAGTA+TGG 0.368060 tig0039039:-4537 None:intergenic
CAACTTACAATTGTCATATC+TGG 0.370044 tig0039039:-11467 None:intergenic
ATTGTACTATGATAAACAAA+TGG 0.372743 tig0039039:-12472 None:intergenic
TTATCTTTGAGTGGTGATAA+TGG 0.375443 tig0039039:+9030 Msa1457550:CDS
CAACTGTGAATTTGAAGATT+CGG 0.376310 tig0039039:+4065 Msa1457550:CDS
TTGATAGCATAGACAGTATC+AGG 0.378590 tig0039039:-11238 None:intergenic
TCAACTGAAACTCCTCCTTT+GGG 0.387705 tig0039039:-11136 None:intergenic
TGATGTTGGTTATAATGTTC+AGG 0.391109 tig0039039:+6438 Msa1457550:CDS
AGTCGCTAAAAGGGATGTTA+TGG 0.391589 tig0039039:+11261 Msa1457550:CDS
GTTATACTGCTGTATTCCTT+TGG 0.391986 tig0039039:-12212 None:intergenic
CACAAAGGAGCCATCAGTTC+CGG 0.394925 tig0039039:-6398 None:intergenic
ACCTTAACAGAAAGAGAATC+TGG 0.399447 tig0039039:-11310 None:intergenic
GCAATTATAAGAGGAAATAC+TGG 0.406420 tig0039039:-11929 None:intergenic
AAATGGGAATTTCTGCTTTG+AGG 0.407460 tig0039039:+1436 Msa1457550:CDS
AAATTCACAGTTGACCCATC+TGG 0.413826 tig0039039:-4055 None:intergenic
ATCTCCACTCATGATGTTGA+TGG 0.419839 tig0039039:+4019 Msa1457550:CDS
GTTATCATTTAAAACAAGTT+GGG 0.421416 tig0039039:+8920 Msa1457550:CDS
ATTGTAAGTTGTCATGTTGA+AGG 0.424855 tig0039039:+11479 Msa1457550:CDS
CGGAACTGATGGCTCCTTTG+TGG 0.426816 tig0039039:+6399 Msa1457550:CDS
AACTGTGAATTTGAAGATTC+GGG 0.426894 tig0039039:+4066 Msa1457550:CDS
AACATCTGATGGTAGAAATC+AGG 0.427976 tig0039039:+11525 Msa1457550:CDS
AATTGACACATCGAATCTAT+TGG 0.432871 tig0039039:+4272 Msa1457550:CDS
ACTAGAAATGCAATTATAAG+AGG 0.433487 tig0039039:-11938 None:intergenic
AAACTAAATTCATGTATTCC+GGG 0.438085 tig0039039:-4210 None:intergenic
ATGTGGGCCCACTGAGATAC+AGG 0.441245 tig0039039:+11729 Msa1457550:CDS
TATTAGGTGGCTTTGACTCA+TGG 0.446176 tig0039039:+1374 Msa1457550:intron
TCGAGCTCAATTGCTTGTGC+TGG 0.446973 tig0039039:-9563 None:intergenic
CAGTATCATACCTTCAAAAC+AGG 0.447689 tig0039039:-9132 None:intergenic
GGAAGAAGTTCGAAATTGGC+AGG 0.447899 tig0039039:-11586 None:intergenic
GGTTATCATTTAAAACAAGT+TGG 0.450986 tig0039039:+8919 Msa1457550:CDS
GTTGATGTGGTTCCCGGCGC+AGG 0.451338 tig0039039:-12125 None:intergenic
TATCATAGTACAATTAAAGA+AGG 0.452166 tig0039039:+12481 Msa1457550:three_prime_UTR
ATGTTATTCCTGGAAAATAC+AGG 0.453422 tig0039039:+3677 Msa1457550:CDS
TCCTTTAGTTGTCAGAAGCT+TGG 0.456340 tig0039039:+8949 Msa1457550:CDS
TGTATCTCAGTGGGCCCACA+TGG 0.456400 tig0039039:-11727 None:intergenic
CGGTTGGGTGTATATATTGA+AGG 0.456654 tig0039039:+6271 Msa1457550:CDS
GGACGCAGATAGAACATTCC+AGG 0.457889 tig0039039:-9111 None:intergenic
GTATAACGACTGCTCTTAGT+TGG 0.461548 tig0039039:+12228 Msa1457550:three_prime_UTR
TTTGGAGGCGTAGATGCAAA+TGG 0.462091 tig0039039:+12306 Msa1457550:three_prime_UTR
GTTGTTGATATTTATCATGA+AGG 0.462716 tig0039039:+4488 Msa1457550:CDS
TGTAAGCTACTCGCGTGGCC+TGG 0.464472 tig0039039:-9613 None:intergenic
ACCAAGCTTCTGACAACTAA+AGG 0.466079 tig0039039:-8950 None:intergenic
AGAAACAAACAGATGGAAAT+GGG 0.467802 tig0039039:+1420 Msa1457550:CDS
TGCTATCAAAGTCGCTAAAA+GGG 0.468824 tig0039039:+11252 Msa1457550:CDS
ATAAGAGGAAATACTGGTGC+TGG 0.469643 tig0039039:-11923 None:intergenic
AACAAATGGGACAAAACGTT+CGG 0.470265 tig0039039:-12458 None:intergenic
AAAAGCTTAACTTTGTTCCT+CGG 0.471593 tig0039039:+4612 Msa1457550:CDS
GCCGTTTCATATGATCTTTG+TGG 0.471905 tig0039039:+1239 Msa1457550:CDS
ATCTGTGACTCTTGTCAAGC+AGG 0.472527 tig0039039:+3585 Msa1457550:CDS
CAAATCTAAGTGAGCTTGAT+GGG 0.474246 tig0039039:-11661 None:intergenic
GAAACCGTAACAGATTCGTC+TGG 0.476770 tig0039039:+11190 Msa1457550:CDS
TTCGAACTTCTTCCAAGTGA+AGG 0.478479 tig0039039:+11595 Msa1457550:CDS
GAAATTCAACACATATATGT+TGG 0.479231 tig0039039:-4188 None:intergenic
TTACTTACATGATGTTCTCT+GGG 0.479658 tig0039039:-6110 None:intergenic
ATTCCCAGACGAATCTGTTA+CGG 0.479748 tig0039039:-11194 None:intergenic
TATTCTGTTTGGGCCAATCC+AGG 0.481303 tig0039039:+4587 Msa1457550:CDS
AGGTTATTACAAGCTTGATC+AGG 0.485867 tig0039039:+244 Msa1457550:CDS
TTGTACTATGATAAACAAAT+GGG 0.486154 tig0039039:-12471 None:intergenic
TCAAATCTAAGTGAGCTTGA+TGG 0.486532 tig0039039:-11662 None:intergenic
GACCAGATCGAAGTTGTAGA+AGG 0.489153 tig0039039:-11637 None:intergenic
AAATTCAACACATATATGTT+GGG 0.489978 tig0039039:-4187 None:intergenic
TCTTTGTGGTTTAGTTAGGA+TGG 0.491868 tig0039039:+1253 Msa1457550:CDS
AAAGCTTAACTTTGTTCCTC+GGG 0.492623 tig0039039:+4613 Msa1457550:CDS
TGCTTCTATTTGCTTTAACT+CGG 0.499988 tig0039039:-12391 None:intergenic
ATGAGTCCAGCAGCATTATC+GGG 0.503144 tig0039039:-2176 None:intergenic
ACTGATGGCTCCTTTGTGGC+AGG 0.503999 tig0039039:+6403 Msa1457550:CDS
GGTTGGAACTGAGGATATCA+AGG 0.505962 tig0039039:+11418 Msa1457550:intron
ATAGAAACAACTCAGTATCT+GGG 0.506259 tig0039039:+9055 Msa1457550:CDS
ATCGCAACATCAATATAAGA+TGG 0.506969 tig0039039:-2206 None:intergenic
GATTGATGATCAGCTGAAGC+AGG 0.507779 tig0039039:+11751 Msa1457550:CDS
TATAACGACTGCTCTTAGTT+GGG 0.508489 tig0039039:+12229 Msa1457550:three_prime_UTR
TCAGTTCTGTTATCTTTGAG+TGG 0.510093 tig0039039:+9021 Msa1457550:CDS
AACAACTCAGTATCTGGGGC+TGG 0.511207 tig0039039:+9060 Msa1457550:CDS
AGTTGTCATGTTGAAGGAAA+CGG 0.513703 tig0039039:+11485 Msa1457550:CDS
GCTGGAGACAGCAGTATCAC+TGG 0.515052 tig0039039:+6340 Msa1457550:CDS
TCGAACTTCTTCCAAGTGAA+GGG 0.516414 tig0039039:+11596 Msa1457550:CDS
GCTACTCCCGATAATGCTGC+TGG 0.517169 tig0039039:+2170 Msa1457550:CDS
GATATTTATCATGAAGGAGC+TGG 0.518777 tig0039039:+4494 Msa1457550:CDS
AGCTCAATTGCTTGTGCTGG+AGG 0.519171 tig0039039:-9560 None:intergenic
CCATGGAAGATAATTGGTGC+TGG 0.519866 tig0039039:+3912 Msa1457550:CDS
ATACTGCTGTATTCCTTTGG+TGG 0.521696 tig0039039:-12209 None:intergenic
CACCTTCTACAACTTCGATC+TGG 0.522791 tig0039039:+11635 Msa1457550:CDS
AACAATTCCTTCGAAGTCCT+CGG 0.524755 tig0039039:-3966 None:intergenic
GGTGTCAAGATCATAGTTGA+TGG 0.525320 tig0039039:+194 Msa1457550:CDS
TGAAGGGCTTATCGAAGGGC+AGG 0.529646 tig0039039:+11612 Msa1457550:CDS
CTCAAAGATAACAGAACTGA+AGG 0.529828 tig0039039:-9018 None:intergenic
AAGAAGTTCGAAATTGGCAG+GGG 0.530875 tig0039039:-11584 None:intergenic
ACCACAAAGATCATATGAAA+CGG 0.534172 tig0039039:-1240 None:intergenic
GAAGCCCGGTCAGTGTCAAA+AGG 0.534333 tig0039039:+11157 Msa1457550:CDS
TGATATCATTGAGGTCGACT+TGG 0.534767 tig0039039:+11688 Msa1457550:CDS
GAAACGACCACCGGAACTGA+TGG 0.535181 tig0039039:+6388 Msa1457550:CDS
GTGACTCTTGTCAAGCAGGC+TGG 0.539074 tig0039039:+3589 Msa1457550:CDS
AGCTTCATAGATGTAAATGT+TGG 0.539175 tig0039039:+3941 Msa1457550:CDS
AACTCAGTATCTGGGGCTGG+AGG 0.539419 tig0039039:+9063 Msa1457550:CDS
CTGAAACTCCTCCTTTGGGT+TGG 0.542791 tig0039039:-11132 None:intergenic
TATCATGAAGGAGCTGGCGT+TGG 0.546808 tig0039039:+4500 Msa1457550:CDS
GAGGAGTTTCAGTTGAAGCC+CGG 0.549081 tig0039039:+11143 Msa1457550:CDS
TGATGGAAACGACATGGGAG+TGG 0.550160 tig0039039:+169 Msa1457550:CDS
CACTATTTATCAGCATCCCC+AGG 0.556200 tig0039039:+11966 Msa1457550:CDS
AAACAGAAATTCACTACGCT+CGG 0.556546 tig0039039:-3650 None:intergenic
CCACAAAAGAAACAAACAGA+TGG 0.556619 tig0039039:+1413 Msa1457550:CDS
AGGTCTATTACTGACAATCA+AGG 0.558543 tig0039039:+224 Msa1457550:CDS
CCAGCACCAATTATCTTCCA+TGG 0.560254 tig0039039:-3912 None:intergenic
ATTTGAATCTGATATCATTG+AGG 0.563041 tig0039039:+11679 Msa1457550:CDS
CCTTCGATAAGCCCTTCACT+TGG 0.563336 tig0039039:-11607 None:intergenic
TATTTGTTTCATCTTTCCCG+TGG 0.573213 tig0039039:-4550 None:intergenic
TACGATAGACATACCTGCGC+CGG 0.573282 tig0039039:+12112 Msa1457550:CDS
AGTCTCATTGCTACCACCAA+AGG 0.573377 tig0039039:+12196 Msa1457550:exon
TTATAATGTTCAGGCTTCAA+AGG 0.574139 tig0039039:+6447 Msa1457550:CDS
TTCTGACAACTAAAGGAATG+AGG 0.578856 tig0039039:-8943 None:intergenic
AGGCAATGCATCATGTAAGC+CGG 0.579548 tig0039039:-4456 None:intergenic
GTGGGACTTGAGTATGGCCA+TGG 0.580898 tig0039039:-4531 None:intergenic
CCAAGTGAAGGGCTTATCGA+AGG 0.581387 tig0039039:+11607 Msa1457550:CDS
AAGCAATTGAGCTCGAATCA+GGG 0.581839 tig0039039:+9570 Msa1457550:CDS
GAAGAAGTTCGAAATTGGCA+GGG 0.582032 tig0039039:-11585 None:intergenic
CTGATATGAACACCAGAAAG+AGG 0.582789 tig0039039:-6307 None:intergenic
CTGTTATCTGGCCAACCCAA+AGG 0.584972 tig0039039:+11121 Msa1457550:CDS
TCCTGGAAAATACAGGCTTG+AGG 0.585866 tig0039039:+3684 Msa1457550:CDS
ATGTTTCCAGGTTGGAACTG+AGG 0.588059 tig0039039:+11409 Msa1457550:intron
CATCAATCCTGTATCTCAGT+GGG 0.588309 tig0039039:-11736 None:intergenic
TGAGCTTCGTAAACATCTGA+TGG 0.589751 tig0039039:+11514 Msa1457550:CDS
ATGCATCATGTAAGCCGGAA+AGG 0.590807 tig0039039:-4451 None:intergenic
TGCTTCTATGGTATAGTGTG+TGG 0.593669 tig0039039:-983 None:intergenic
ACAAGAGTCACAGATACAGA+TGG 0.594583 tig0039039:-3577 None:intergenic
ACTTTGTTCCTCGGGACTCG+AGG 0.595140 tig0039039:+4621 Msa1457550:CDS
AGTATCACTGGACTTAAAAG+TGG 0.598637 tig0039039:+6352 Msa1457550:CDS
ACTCAGTATCTGGGGCTGGA+GGG 0.601748 tig0039039:+9064 Msa1457550:CDS
GGTCCTCTGTATGATGATGT+TGG 0.602538 tig0039039:+6424 Msa1457550:CDS
CTAATACTTGAAACGACCAC+CGG 0.604363 tig0039039:+6379 Msa1457550:CDS
GTTACATAAATCAACCAGAT+GGG 0.605567 tig0039039:+4041 Msa1457550:CDS
ACGATAGACATACCTGCGCC+GGG 0.605634 tig0039039:+12113 Msa1457550:CDS
GGTTACATAAATCAACCAGA+TGG 0.607485 tig0039039:+4040 Msa1457550:CDS
TTCCATGGTCACTGATTCGG+GGG 0.607686 tig0039039:-3897 None:intergenic
CCCAACCGACAAGAAAATGT+AGG 0.607780 tig0039039:-6256 None:intergenic
AAACCGTAACAGATTCGTCT+GGG 0.609620 tig0039039:+11191 Msa1457550:CDS
TGGAAACGACATGGGAGTGG+AGG 0.611254 tig0039039:+172 Msa1457550:CDS
GGAAACGACATGGGAGTGGA+GGG 0.615099 tig0039039:+173 Msa1457550:CDS
AGATGTAAATGTTGGAGCCG+AGG 0.616032 tig0039039:+3949 Msa1457550:CDS
TCATGTTGAAGGAAACGGTA+CGG 0.617690 tig0039039:+11490 Msa1457550:CDS
TGGCCATACTCAAGTCCCAC+GGG 0.618469 tig0039039:+4534 Msa1457550:CDS
TGTAGTTGATGGAAACGACA+TGG 0.619360 tig0039039:+163 Msa1457550:CDS
GTATCTCAGTGGGCCCACAT+GGG 0.619772 tig0039039:-11726 None:intergenic
ATTTGTTTCATCTTTCCCGT+GGG 0.620563 tig0039039:-4549 None:intergenic
TCATAGTTGATGGTCATGAA+AGG 0.623919 tig0039039:+204 Msa1457550:CDS
CAAGTGAAGGGCTTATCGAA+GGG 0.624792 tig0039039:+11608 Msa1457550:CDS
CTTCCATGGTCACTGATTCG+GGG 0.625526 tig0039039:-3898 None:intergenic
CATGGAAGATAATTGGTGCT+GGG 0.626700 tig0039039:+3913 Msa1457550:CDS
GTTGGAACTGAGGATATCAA+GGG 0.626948 tig0039039:+11419 Msa1457550:CDS
GTTGGAGCCGAGGACTTCGA+AGG 0.629183 tig0039039:+3959 Msa1457550:CDS
AGCAATTGAGCTCGAATCAG+GGG 0.632098 tig0039039:+9571 Msa1457550:CDS
GTAACCATCAACATCATGAG+TGG 0.639513 tig0039039:-4023 None:intergenic
GAAAATTCAACATTCAACAA+TGG 0.642979 tig0039039:-2236 None:intergenic
GCTGACAAGCGATATTCACC+AGG 0.644183 tig0039039:-2140 None:intergenic
CCGTGGTGCTGTAGTCTGCA+AGG 0.644204 tig0039039:+3543 Msa1457550:CDS
AAAGGAGCCATCAGTTCCGG+TGG 0.646213 tig0039039:-6395 None:intergenic
TAGAAACAACTCAGTATCTG+GGG 0.651855 tig0039039:+9056 Msa1457550:CDS
CACACTATACCATAGAAGCA+AGG 0.657779 tig0039039:+986 Msa1457550:CDS
TTATCTGGCCAACCCAAAGG+AGG 0.657923 tig0039039:+11124 Msa1457550:CDS
TAGGCTTTGGTCAATGTCCG+TGG 0.660231 tig0039039:+3526 Msa1457550:intron
TGGCGTTGGTGATAATGCCA+TGG 0.660482 tig0039039:+4514 Msa1457550:CDS
ATGGCCATACTCAAGTCCCA+CGG 0.662322 tig0039039:+4533 Msa1457550:CDS
GTAGTTGATGGAAACGACAT+GGG 0.665582 tig0039039:+164 Msa1457550:CDS
TTAGTTAGGATGGTTAGTAG+CGG 0.666821 tig0039039:+1263 Msa1457550:CDS
TAGTAGCGGTCAGAAAGCAA+CGG 0.675411 tig0039039:+1277 Msa1457550:CDS
CAACTTCAAGAAAAGATGCG+AGG 0.676910 tig0039039:+12144 Msa1457550:CDS
CAGAAATTCACTACGCTCGG+AGG 0.677987 tig0039039:-3647 None:intergenic
TCTGGGAATTATCGTCTGAG+AGG 0.678057 tig0039039:+11208 Msa1457550:CDS
TCATCAATCCTGTATCTCAG+TGG 0.679879 tig0039039:-11737 None:intergenic
ATACAGAGGACCTGCCACAA+AGG 0.685844 tig0039039:-6413 None:intergenic
ATATGAACACCAGAAAGAGG+AGG 0.692528 tig0039039:-6304 None:intergenic
AAACCTGTAAGCTACTCGCG+TGG 0.699670 tig0039039:-9618 None:intergenic
AGAAGTTCGAAATTGGCAGG+GGG 0.705475 tig0039039:-11583 None:intergenic
CCTTGCAGACTACAGCACCA+CGG 0.708504 tig0039039:-3543 None:intergenic
TAACCAACATCATCATACAG+AGG 0.720625 tig0039039:-6427 None:intergenic
AAAATGTACCTCGAGTCCCG+AGG 0.736060 tig0039039:-4629 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAATTAAATTAAATTA+AGG - tig0039039:3339-3358 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + tig0039039:6650-6669 Msa1457550:intron 0.0%
!! ATATATATATATATATATAT+GGG + tig0039039:6649-6668 Msa1457550:intron 0.0%
!! TAAAAAATGTTATTATTTAG+AGG + tig0039039:1860-1879 Msa1457550:intron 10.0%
!!! TGATTTTATATCAAATATTT+TGG + tig0039039:1946-1965 Msa1457550:intron 10.0%
!!! TGTTTTATAATATTTCTTTT+AGG + tig0039039:3862-3881 Msa1457550:intron 10.0%
!! ATATATATATATATAGAGTT+CGG + tig0039039:6709-6728 Msa1457550:intron 10.0%
!!! ATTATTTGTTTTGATTTTAA+TGG + tig0039039:6806-6825 Msa1457550:intron 10.0%
!!! ATTATTTATTGTATTTTTGA+TGG - tig0039039:6987-7006 None:intergenic 10.0%
!! ATATATACATATATATATAG+GGG - tig0039039:8321-8340 None:intergenic 10.0%
!! ATTATACAATCTTAAAATTT+AGG - tig0039039:8481-8500 None:intergenic 10.0%
!!! TTTTTATGAAATGGAAATAT+TGG - tig0039039:820-839 None:intergenic 15.0%
!! TATTTCCATTTCATAAAAAA+TGG + tig0039039:821-840 Msa1457550:intron 15.0%
!! AATACAACAAAATTATATTG+AGG - tig0039039:3243-3262 None:intergenic 15.0%
!! TAAATTTGCAATTATGTAAT+GGG - tig0039039:4757-4776 None:intergenic 15.0%
!! ATAAATTTGCAATTATGTAA+TGG - tig0039039:4758-4777 None:intergenic 15.0%
!! TAGTAACTATAAATTCAAAA+TGG - tig0039039:4893-4912 None:intergenic 15.0%
!! TAACTATAATAAACTCAAAA+GGG - tig0039039:5729-5748 None:intergenic 15.0%
!!! TTACCTTTTTTTTTTTTTAC+AGG + tig0039039:6057-6076 Msa1457550:intron 15.0%
!! ATTCCTGTAAAAAAAAAAAA+AGG - tig0039039:6063-6082 None:intergenic 15.0%
!! AATTAAATATTATGTGATTG+AGG + tig0039039:7338-7357 Msa1457550:intron 15.0%
!! ATTAAATATTATGTGATTGA+GGG + tig0039039:7339-7358 Msa1457550:intron 15.0%
!!! CATTGATTAAATAAAATGAA+CGG + tig0039039:7394-7413 Msa1457550:intron 15.0%
!!! ACTTATAGTTGATAAATAAA+AGG + tig0039039:9323-9342 Msa1457550:intron 15.0%
!! ATATCCTTATTCTTTATATA+TGG + tig0039039:9509-9528 Msa1457550:intron 15.0%
!!! ATTGTTTTTTTAGTTGATTA+TGG + tig0039039:9743-9762 Msa1457550:intron 15.0%
!!! TTTTAGTTTATATCTAGTAT+TGG + tig0039039:10421-10440 Msa1457550:intron 15.0%
!!! GCAATACAATATAATTTTTA+CGG - tig0039039:11004-11023 None:intergenic 15.0%
!!! GATGTTTTTCTTTATTAATT+TGG + tig0039039:12288-12307 Msa1457550:three_prime_UTR 15.0%
!!! TTTTTTTTACTTTAGCTTTT+TGG + tig0039039:12368-12387 Msa1457550:three_prime_UTR 15.0%
!! GTTTGTGTTGAATTTATTAT+AGG + tig0039039:954-973 Msa1457550:intron 20.0%
!!! TACCTTTTGTTAATTGTATT+AGG + tig0039039:1358-1377 Msa1457550:intron 20.0%
!! AAAAATCAATCTATTGTGAA+GGG + tig0039039:1905-1924 Msa1457550:intron 20.0%
!! TGTTCAGATTAATAAAATTC+AGG + tig0039039:2483-2502 Msa1457550:intron 20.0%
!! AATAACTTTGTCATTAACAT+CGG + tig0039039:2603-2622 Msa1457550:intron 20.0%
!! AATTATTGTGGAATTCAATT+TGG - tig0039039:3185-3204 None:intergenic 20.0%
!! GGTTAAATTTCCATAAAAAT+TGG + tig0039039:3476-3495 Msa1457550:intron 20.0%
!!! AACAGAATAACCAATTTTTA+TGG - tig0039039:3489-3508 None:intergenic 20.0%
!! TATTTAAAAGGAATGAATTC+AGG - tig0039039:3785-3804 None:intergenic 20.0%
!! AAATTCAACACATATATGTT+GGG - tig0039039:4190-4209 None:intergenic 20.0%
!! AAAACTAAATTCATGTATTC+CGG - tig0039039:4214-4233 None:intergenic 20.0%
!! ATTTATATTTGCTTCTTTCT+AGG + tig0039039:4338-4357 Msa1457550:intron 20.0%
!! AATATAGTTGAAGTAGAATT+AGG - tig0039039:4858-4877 None:intergenic 20.0%
!! TAAATTGACAATCATGTAAT+GGG - tig0039039:4975-4994 None:intergenic 20.0%
!! ATAAATTGACAATCATGTAA+TGG - tig0039039:4976-4995 None:intergenic 20.0%
!! ATAAATTAGTACTGTATGTA+TGG + tig0039039:5026-5045 Msa1457550:intron 20.0%
!! AAAATAGTTCGCATATAATT+AGG - tig0039039:5080-5099 None:intergenic 20.0%
!! GTAACTATAATAAACTCAAA+AGG - tig0039039:5730-5749 None:intergenic 20.0%
!! TAACTATATCAAACAGATAT+TGG - tig0039039:5764-5783 None:intergenic 20.0%
!! ATGAAAACATTTATCCTTAA+AGG - tig0039039:5821-5840 None:intergenic 20.0%
!! AAGGTAAACAGTATAAAATA+TGG - tig0039039:6044-6063 None:intergenic 20.0%
!!! TTTTTTTTTTACAGGAATGA+TGG + tig0039039:6065-6084 Msa1457550:intron 20.0%
!!! AAATGAATTTTTTCAGTGAT+TGG - tig0039039:6181-6200 None:intergenic 20.0%
!!! ATAAGTTTTGATGAAAATAG+AGG - tig0039039:6531-6550 None:intergenic 20.0%
!!! TCTATTTTCATCAAAACTTA+TGG + tig0039039:6530-6549 Msa1457550:intron 20.0%
!! AATCAAAACAAATAATGCTT+AGG - tig0039039:6802-6821 None:intergenic 20.0%
!!! ATGATTGATTTGAAACATTA+GGG - tig0039039:7015-7034 None:intergenic 20.0%
!!! TATGATTGATTTGAAACATT+AGG - tig0039039:7016-7035 None:intergenic 20.0%
!! CATATTTACTACAAACTAAT+TGG + tig0039039:7032-7051 Msa1457550:intron 20.0%
!! TTTGGAAAAATTGAAACTAA+AGG + tig0039039:7578-7597 Msa1457550:intron 20.0%
!!! AATCGACTTTTTTTTTTGTT+TGG + tig0039039:8002-8021 Msa1457550:intron 20.0%
!! AAAGAAAACATTAATGATAC+TGG + tig0039039:8169-8188 Msa1457550:intron 20.0%
!!! ATTTTTTCAAAACAAAACCA+AGG + tig0039039:8219-8238 Msa1457550:intron 20.0%
!!! TTTTTTCAAAACAAAACCAA+GGG + tig0039039:8220-8239 Msa1457550:intron 20.0%
!! AATCTTAAAATTTAGGAGTA+GGG - tig0039039:8474-8493 None:intergenic 20.0%
!!! GTTATCATTTAAAACAAGTT+GGG + tig0039039:8920-8939 Msa1457550:CDS 20.0%
!! AACAAAATGTGAAAAAGAAA+AGG + tig0039039:9347-9366 Msa1457550:intron 20.0%
!! CAAGATGATTAAAATTATGT+TGG + tig0039039:9472-9491 Msa1457550:intron 20.0%
!! AAGACCATATATAAAGAATA+AGG - tig0039039:9516-9535 None:intergenic 20.0%
!!! TATGGTTTTATATCTTATCT+TGG + tig0039039:9761-9780 Msa1457550:intron 20.0%
!!! ATATTATATAGTTGCTTTCA+AGG - tig0039039:9800-9819 None:intergenic 20.0%
!!! TCTATATTTAAGTTGGAATA+TGG + tig0039039:9945-9964 Msa1457550:intron 20.0%
!! GCATATATCATATCAATTAT+TGG - tig0039039:10244-10263 None:intergenic 20.0%
!! ATTAGTTAAAATAACTAGGA+AGG - tig0039039:10277-10296 None:intergenic 20.0%
!! CTCAATTAGTTAAAATAACT+AGG - tig0039039:10281-10300 None:intergenic 20.0%
!! GATAATTTAAATAGTTGAAG+TGG - tig0039039:10579-10598 None:intergenic 20.0%
!!! TAATTTTCCTTATTTCAAGA+GGG + tig0039039:10854-10873 Msa1457550:intron 20.0%
!!! TTTGGATTTTATAGTTTTTG+AGG + tig0039039:11442-11461 Msa1457550:CDS 20.0%
!!! GTTTTTCTTTATTAATTTGG+AGG + tig0039039:12291-12310 Msa1457550:three_prime_UTR 20.0%
!! TTGTACTATGATAAACAAAT+GGG - tig0039039:12474-12493 None:intergenic 20.0%
!! ATTGTACTATGATAAACAAA+TGG - tig0039039:12475-12494 None:intergenic 20.0%
!! TATCATAGTACAATTAAAGA+AGG + tig0039039:12481-12500 Msa1457550:three_prime_UTR 20.0%
! ATAACCAATTTACAGAAACA+AGG - tig0039039:407-426 None:intergenic 25.0%
!!! AATTGGTTATTTCTGTCATT+TGG + tig0039039:417-436 Msa1457550:intron 25.0%
!!! ATTTTTAAAATCCCTCCAAA+AGG + tig0039039:607-626 Msa1457550:intron 25.0%
! TGTTTACATTCTGAATCATT+TGG - tig0039039:634-653 None:intergenic 25.0%
! TAACACTCGAATGTTAAATT+TGG + tig0039039:747-766 Msa1457550:intron 25.0%
! AACACTCGAATGTTAAATTT+GGG + tig0039039:748-767 Msa1457550:intron 25.0%
!!! TTCTGCCATTTTTTATGAAA+TGG - tig0039039:829-848 None:intergenic 25.0%
! AATGGCAGAATAAACTTTAA+AGG + tig0039039:839-858 Msa1457550:intron 25.0%
!! ATTTTTAAACATACCCAACA+AGG - tig0039039:912-931 None:intergenic 25.0%
! CAAGAAATTGGAGAATTATA+TGG + tig0039039:1026-1045 Msa1457550:CDS 25.0%
! CACCTAATACAATTAACAAA+AGG - tig0039039:1363-1382 None:intergenic 25.0%
!! CTTTTGTTAATTGTATTAGG+TGG + tig0039039:1361-1380 Msa1457550:intron 25.0%
!!! TTTTGTGGTTTTACATTATC+AGG - tig0039039:1401-1420 None:intergenic 25.0%
!! TTTTATCTCGTAGTGATTAT+TGG + tig0039039:1502-1521 Msa1457550:intron 25.0%
! AAATAGCATATTCTACTACA+TGG + tig0039039:1573-1592 Msa1457550:intron 25.0%
! AATAGCATATTCTACTACAT+GGG + tig0039039:1574-1593 Msa1457550:intron 25.0%
!! AATTTTGCTTTAATTGCAGT+TGG + tig0039039:1602-1621 Msa1457550:intron 25.0%
! ATATAGTCTCAAACTTTAAC+AGG + tig0039039:1679-1698 Msa1457550:intron 25.0%
!!! GATGATATTTTTATGCATAC+TGG + tig0039039:1734-1753 Msa1457550:intron 25.0%
! ATTTCTGTATGAACTCAAAT+TGG + tig0039039:1763-1782 Msa1457550:intron 25.0%
! GAAAAATCAATCTATTGTGA+AGG + tig0039039:1904-1923 Msa1457550:intron 25.0%
! AAAATCAATCTATTGTGAAG+GGG + tig0039039:1906-1925 Msa1457550:intron 25.0%
! TAAGTTTGATTGTTCCTTAT+CGG + tig0039039:2083-2102 Msa1457550:intron 25.0%
! AATAAGATAGAATACCGATA+AGG - tig0039039:2100-2119 None:intergenic 25.0%
! TTATCGGTATTCTATCTTAT+TGG + tig0039039:2099-2118 Msa1457550:intron 25.0%
!!! ATCTTATTGGTTTAATGTCT+AGG + tig0039039:2112-2131 Msa1457550:intron 25.0%
! GAAAATTCAACATTCAACAA+TGG - tig0039039:2239-2258 None:intergenic 25.0%
! GCGTAATATATCATTTACAA+TGG - tig0039039:2279-2298 None:intergenic 25.0%
!!! ATGAGATGACAACTTTTTTA+TGG + tig0039039:2400-2419 Msa1457550:intron 25.0%
! ATAGTGTCGCATATTATTAT+TGG - tig0039039:2442-2461 None:intergenic 25.0%
! CAGATTAATAAAATTCAGGA+TGG + tig0039039:2487-2506 Msa1457550:intron 25.0%
! ATAACTTTGTCATTAACATC+GGG + tig0039039:2604-2623 Msa1457550:intron 25.0%
! CATCAAAATCAGTAAAGAAT+GGG - tig0039039:2694-2713 None:intergenic 25.0%
! TATGAATCTATGCATTATCT+GGG - tig0039039:2823-2842 None:intergenic 25.0%
!! TTGATCTTTTTCTTTAGCTA+AGG - tig0039039:2878-2897 None:intergenic 25.0%
! ATACAAACCACAAACAAAAT+GGG - tig0039039:3730-3749 None:intergenic 25.0%
! TATACAAACCACAAACAAAA+TGG - tig0039039:3731-3750 None:intergenic 25.0%
! GCATTAAAACACAAAACTAA+AGG - tig0039039:3763-3782 None:intergenic 25.0%
! AAAAGCAGCAACTATTTAAA+AGG - tig0039039:3797-3816 None:intergenic 25.0%
!!! GGAATTGTTTTTGTTCAAAA+AGG + tig0039039:3980-3999 Msa1457550:CDS 25.0%
! GAAATTCAACACATATATGT+TGG - tig0039039:4191-4210 None:intergenic 25.0%
! AAACTAAATTCATGTATTCC+GGG - tig0039039:4213-4232 None:intergenic 25.0%
!! ATATCAACAACTATTTTCTC+AGG - tig0039039:4479-4498 None:intergenic 25.0%
! GTTGTTGATATTTATCATGA+AGG + tig0039039:4488-4507 Msa1457550:CDS 25.0%
! ATACTGCTCTTAATTATTAC+AGG - tig0039039:4801-4820 None:intergenic 25.0%
! ATACAGTACTAATTTATTGC+AGG - tig0039039:5023-5042 None:intergenic 25.0%
!!! AACTATTTTAAGTGCCTTAT+TGG + tig0039039:5091-5110 Msa1457550:intron 25.0%
!!! ACTATTTTAAGTGCCTTATT+GGG + tig0039039:5092-5111 Msa1457550:intron 25.0%
! CATGATAAGAGTTTATATAG+AGG + tig0039039:5149-5168 Msa1457550:intron 25.0%
! CATGATAAGAGTTTATATAG+AGG + tig0039039:5149-5168 Msa1457550:intron 25.0%
! TATCAAACAGATATTGGATT+CGG - tig0039039:5758-5777 None:intergenic 25.0%
!!! ATGTTTGCTTTTTTCCTTTA+AGG + tig0039039:5804-5823 Msa1457550:intron 25.0%
! TCATTTCAATACTACAAAGA+GGG - tig0039039:5997-6016 None:intergenic 25.0%
! TTCATTTCAATACTACAAAG+AGG - tig0039039:5998-6017 None:intergenic 25.0%
!!! TAGTGCTGTTTTTTTTTTCT+GGG + tig0039039:6155-6174 Msa1457550:intron 25.0%
!! ATATTCCTACATTTTCTTGT+CGG + tig0039039:6251-6270 Msa1457550:CDS 25.0%
! AACAAATAATGCTTAGGATT+TGG - tig0039039:6796-6815 None:intergenic 25.0%
! TATTCACTTAATTGTTAACG+TGG + tig0039039:6837-6856 Msa1457550:intron 25.0%
! ATTCACTTAATTGTTAACGT+GGG + tig0039039:6838-6857 Msa1457550:intron 25.0%
!!! ACGTGTATTTAAGATTTTGT+TGG + tig0039039:7090-7109 Msa1457550:intron 25.0%
! TTTCCAAAAAACAAAACCAA+GGG - tig0039039:7566-7585 None:intergenic 25.0%
!! TTTTCCAAAAAACAAAACCA+AGG - tig0039039:7567-7586 None:intergenic 25.0%
! TAGTTCTTATCTCTAATTGT+AGG - tig0039039:8387-8406 None:intergenic 25.0%
! TACAATTAGAGATAAGAACT+AGG + tig0039039:8386-8405 Msa1457550:intron 25.0%
! CAATCTTAAAATTTAGGAGT+AGG - tig0039039:8475-8494 None:intergenic 25.0%
! CCTATCTTAGATATGTTATT+GGG + tig0039039:8503-8522 Msa1457550:intron 25.0%
! AAGCAAACCAAAACTAAAAA+TGG - tig0039039:8875-8894 None:intergenic 25.0%
!!! ACTTGTTTTAAATGATAACC+AGG - tig0039039:8919-8938 None:intergenic 25.0%
!! GGTTATCATTTAAAACAAGT+TGG + tig0039039:8919-8938 Msa1457550:CDS 25.0%
! ATTAAAATTATGTTGGTCAC+TGG + tig0039039:9479-9498 Msa1457550:intron 25.0%
!!! TATATATGGTCTTATTTCCT+AGG + tig0039039:9523-9542 Msa1457550:intron 25.0%
! AATGATAGTAAGAGCAATTT+GGG - tig0039039:9658-9677 None:intergenic 25.0%
! AAATGATAGTAAGAGCAATT+TGG - tig0039039:9659-9678 None:intergenic 25.0%
! AAGTTAAAGCTATCTTTGAT+AGG + tig0039039:9679-9698 Msa1457550:intron 25.0%
!!! AGTTCCTAGATATCTTTTTT+GGG - tig0039039:9859-9878 None:intergenic 25.0%
!!! AAGTTCCTAGATATCTTTTT+TGG - tig0039039:9860-9879 None:intergenic 25.0%
! TTCTCTCTCTATATTTAAGT+TGG + tig0039039:9938-9957 Msa1457550:intron 25.0%
!!! GTTATTTTGTGTTTATAGTG+TGG + tig0039039:10001-10020 Msa1457550:intron 25.0%
! TTCTCTTTCTATATCAAAGT+TGG + tig0039039:10065-10084 Msa1457550:intron 25.0%
! TCTATATCAAAGTTGGAATA+TGG + tig0039039:10072-10091 Msa1457550:intron 25.0%
!!! CTAATTTTCCTTATTTCAAG+AGG + tig0039039:10853-10872 Msa1457550:intron 25.0%
! TTTAATACCCTCTTGAAATA+AGG - tig0039039:10864-10883 None:intergenic 25.0%
! ATTAAACTATTGCTGATGAT+AGG + tig0039039:10878-10897 Msa1457550:intron 25.0%
! TTAAACTATTGCTGATGATA+GGG + tig0039039:10879-10898 Msa1457550:intron 25.0%
! ATAAATTCTTACAGTGCTAT+TGG + tig0039039:11088-11107 Msa1457550:intron 25.0%
! AGCTAAACAAGATAGTAAAA+AGG - tig0039039:11348-11367 None:intergenic 25.0%
! ATTTGAATCTGATATCATTG+AGG + tig0039039:11679-11698 Msa1457550:CDS 25.0%
! TTAGGCAAAAATATAAAGGA+TGG - tig0039039:11792-11811 None:intergenic 25.0%
! GCAATTAGGCAAAAATATAA+AGG - tig0039039:11796-11815 None:intergenic 25.0%
! CTTGAAAACTAAATGCAATT+AGG - tig0039039:11810-11829 None:intergenic 25.0%
!!! TTGCATTTAGTTTTCAAGAT+TGG + tig0039039:11812-11831 Msa1457550:intron 25.0%
!!! TTGGCCTATTTACTATTTTT+CGG + tig0039039:11831-11850 Msa1457550:intron 25.0%
! ACTAGAAATGCAATTATAAG+AGG - tig0039039:11941-11960 None:intergenic 25.0%
! TATGAATATCAAACTTACCT+GGG - tig0039039:11986-12005 None:intergenic 25.0%
! ATATGAATATCAAACTTACC+TGG - tig0039039:11987-12006 None:intergenic 25.0%
CATAGACAATGCATTCTTTA+TGG + tig0039039:302-321 Msa1457550:intron 30.0%
CTCAGTTAACTTTCAGTATA+GGG + tig0039039:342-361 Msa1457550:intron 30.0%
TCAGTTAACTTTCAGTATAG+GGG + tig0039039:343-362 Msa1457550:intron 30.0%
TTTACAGAAACAAGGAAAGT+GGG - tig0039039:399-418 None:intergenic 30.0%
ATTTACAGAAACAAGGAAAG+TGG - tig0039039:400-419 None:intergenic 30.0%
!! CTTTCCTTGTTTCTGTAAAT+TGG + tig0039039:400-419 Msa1457550:intron 30.0%
AATAAATCAAGTGATCAAGC+AGG - tig0039039:579-598 None:intergenic 30.0%
AGAATGTAAACATAATCGTC+AGG + tig0039039:642-661 Msa1457550:intron 30.0%
GCATTACAAGTTCAAGAAAT+TGG + tig0039039:1014-1033 Msa1457550:CDS 30.0%
TTGTGAAAAGCTTGGAATTT+AGG + tig0039039:1133-1152 Msa1457550:intron 30.0%
TCTTCTATTGAAGCCATATT+TGG - tig0039039:1212-1231 None:intergenic 30.0%
ACCACAAAGATCATATGAAA+CGG - tig0039039:1243-1262 None:intergenic 30.0%
ATGATCTTTGTGGTTTAGTT+AGG + tig0039039:1249-1268 Msa1457550:CDS 30.0%
TACCAAGAAAACTACAGAAA+GGG - tig0039039:1313-1332 None:intergenic 30.0%
TTACCAAGAAAACTACAGAA+AGG - tig0039039:1314-1333 None:intergenic 30.0%
AAGAAACAAACAGATGGAAA+TGG + tig0039039:1419-1438 Msa1457550:CDS 30.0%
AGAAACAAACAGATGGAAAT+GGG + tig0039039:1420-1439 Msa1457550:CDS 30.0%
ACTACGAGATAAAACAAAAG+GGG - tig0039039:1496-1515 None:intergenic 30.0%
CACTACGAGATAAAACAAAA+GGG - tig0039039:1497-1516 None:intergenic 30.0%
TCACTACGAGATAAAACAAA+AGG - tig0039039:1498-1517 None:intergenic 30.0%
! AAGCAAAAGCACAAAATTTG+TGG + tig0039039:1814-1833 Msa1457550:intron 30.0%
CTTAGAAGATCATTTAGAAG+CGG - tig0039039:2067-2086 None:intergenic 30.0%
ATCGCAACATCAATATAAGA+TGG - tig0039039:2209-2228 None:intergenic 30.0%
! GTTGAATGTTGAATTTTCAC+AGG + tig0039039:2241-2260 Msa1457550:CDS 30.0%
! CAAAAACTTGTTTCCATTGA+TGG + tig0039039:2579-2598 Msa1457550:intron 30.0%
GACAAAGTTATTACCATCAA+TGG - tig0039039:2595-2614 None:intergenic 30.0%
AAAATCAGTAAAGAATGGGT+TGG - tig0039039:2690-2709 None:intergenic 30.0%
CCATCAAAATCAGTAAAGAA+TGG - tig0039039:2695-2714 None:intergenic 30.0%
!!! CCATTCTTTACTGATTTTGA+TGG + tig0039039:2692-2711 Msa1457550:intron 30.0%
CTATGAATCTATGCATTATC+TGG - tig0039039:2824-2843 None:intergenic 30.0%
TTGTAAGTTAATGACACCTT+TGG - tig0039039:2931-2950 None:intergenic 30.0%
!!! CCATTATTTTGAACCATTAG+AGG - tig0039039:3054-3073 None:intergenic 30.0%
CCTCTAATGGTTCAAAATAA+TGG + tig0039039:3051-3070 Msa1457550:intron 30.0%
ATGTTATTCCTGGAAAATAC+AGG + tig0039039:3677-3696 Msa1457550:CDS 30.0%
AGCTTCATAGATGTAAATGT+TGG + tig0039039:3941-3960 Msa1457550:CDS 30.0%
! TTTTTGTTCAAAAAGGCTAC+TGG + tig0039039:3987-4006 Msa1457550:CDS 30.0%
! TTTTGTTCAAAAAGGCTACT+GGG + tig0039039:3988-4007 Msa1457550:CDS 30.0%
GTTACATAAATCAACCAGAT+GGG + tig0039039:4041-4060 Msa1457550:CDS 30.0%
CAACTGTGAATTTGAAGATT+CGG + tig0039039:4065-4084 Msa1457550:CDS 30.0%
AACTGTGAATTTGAAGATTC+GGG + tig0039039:4066-4085 Msa1457550:CDS 30.0%
! TTGGTTCGTTTAAATATGTC+AGG + tig0039039:4105-4124 Msa1457550:intron 30.0%
CATATATGTGTTGAATTTCC+CGG + tig0039039:4192-4211 Msa1457550:CDS 30.0%
AATTGACACATCGAATCTAT+TGG + tig0039039:4272-4291 Msa1457550:CDS 30.0%
! TTTTCTCCTTTTAGATGGAT+GGG - tig0039039:4404-4423 None:intergenic 30.0%
!! GGAGAAAAGCATCTTATTAA+AGG + tig0039039:4416-4435 Msa1457550:CDS 30.0%
TGTCTTTGAGTATTCTGTTT+GGG + tig0039039:4577-4596 Msa1457550:CDS 30.0%
AAAAGCTTAACTTTGTTCCT+CGG + tig0039039:4612-4631 Msa1457550:CDS 30.0%
! TTGCAGTTGAATTTGTGTTT+TGG + tig0039039:4666-4685 Msa1457550:intron 30.0%
!!! GAATTTGTGTTTTGGTTACA+TGG + tig0039039:4674-4693 Msa1457550:intron 30.0%
GATAAGAGTTTATATAGAGG+AGG + tig0039039:5152-5171 Msa1457550:intron 30.0%
TGATACCATGTTGAAATATG+AGG - tig0039039:5220-5239 None:intergenic 30.0%
GATAAGAGTTTATATAGAGG+AGG + tig0039039:5152-5171 Msa1457550:intron 30.0%
ATAAGGCATGTTGAAATATG+AGG - tig0039039:5701-5720 None:intergenic 30.0%
! AACTCAAAAGGGTACAAATA+AGG - tig0039039:5718-5737 None:intergenic 30.0%
TTACTTACATGATGTTCTCT+GGG - tig0039039:6113-6132 None:intergenic 30.0%
GAACATCATGTAAGTAACAA+AGG + tig0039039:6116-6135 Msa1457550:intron 30.0%
!!! CTAGTGCTGTTTTTTTTTTC+TGG + tig0039039:6154-6173 Msa1457550:intron 30.0%
! TGATGTTGGTTATAATGTTC+AGG + tig0039039:6438-6457 Msa1457550:CDS 30.0%
TTATAATGTTCAGGCTTCAA+AGG + tig0039039:6447-6466 Msa1457550:CDS 30.0%
TGAGAAAACGTTTCATGATT+TGG - tig0039039:6623-6642 None:intergenic 30.0%
TTCACTTAATTGTTAACGTG+GGG + tig0039039:6839-6858 Msa1457550:intron 30.0%
AGAATGAAACCGAAAACAAA+GGG - tig0039039:6964-6983 None:intergenic 30.0%
! CAAACTAATTGGTATTGAGA+AGG + tig0039039:7043-7062 Msa1457550:intron 30.0%
CCAATTGAATTGTTGTCAAT+CGG + tig0039039:7135-7154 Msa1457550:intron 30.0%
! CCATATATTTTGCATTCAGA+TGG - tig0039039:7195-7214 None:intergenic 30.0%
CCATCTGAATGCAAAATATA+TGG + tig0039039:7192-7211 Msa1457550:intron 30.0%
!! ATCTCTAGAGTTATCTATGA+TGG + tig0039039:7244-7263 Msa1457550:intron 30.0%
TAAAATGAACGGTTGAGATT+TGG + tig0039039:7405-7424 Msa1457550:intron 30.0%
! GTTTTTGTGTCCAAATCAAA+AGG - tig0039039:8242-8261 None:intergenic 30.0%
!!! AAACCCTTGGTTTTGTTTTT+TGG + tig0039039:7560-7579 Msa1457550:intron 30.0%
AGGTAAATCAGAAAAGAAGA+GGG - tig0039039:7747-7766 None:intergenic 30.0%
TAGGTAAATCAGAAAAGAAG+AGG - tig0039039:7748-7767 None:intergenic 30.0%
TGCTTCCAAAAGAAACTAAT+TGG + tig0039039:7775-7794 Msa1457550:intron 30.0%
!! AACTAATTGGTGCTGAATAT+TGG + tig0039039:7788-7807 Msa1457550:intron 30.0%
TTGTAAAGCAAGTAGTAACA+CGG + tig0039039:7844-7863 Msa1457550:intron 30.0%
AAGAATGAGAGATAAGAAAG+AGG - tig0039039:7896-7915 None:intergenic 30.0%
! GTTTTTGTGTCCAAATCAAA+AGG + tig0039039:8242-8261 Msa1457550:intron 30.0%
GCCTATCTTAGATATGTTAT+TGG + tig0039039:8502-8521 Msa1457550:intron 30.0%
! CCCAATAACATATCTAAGAT+AGG - tig0039039:8506-8525 None:intergenic 30.0%
ATATTGGTCATGGATAAATG+CGG - tig0039039:8550-8569 None:intergenic 30.0%
ATTCTTAGAATTTGAGCCAA+CGG - tig0039039:8702-8721 None:intergenic 30.0%
AAAAGAAGCAAACACAAAGT+AGG - tig0039039:8784-8803 None:intergenic 30.0%
TTCATCGAATGATACTCATA+AGG - tig0039039:8827-8846 None:intergenic 30.0%
! TTTTATTCATATTTGCAGCC+TGG + tig0039039:8898-8917 Msa1457550:intron 30.0%
TTATCTTTGAGTGGTGATAA+TGG + tig0039039:9030-9049 Msa1457550:CDS 30.0%
TATAGAAACAACTCAGTATC+TGG + tig0039039:9054-9073 Msa1457550:CDS 30.0%
ATAGAAACAACTCAGTATCT+GGG + tig0039039:9055-9074 Msa1457550:CDS 30.0%
!! GTATTTGATAGTTTGTTTCC+TGG + tig0039039:9093-9112 Msa1457550:CDS 30.0%
AGTGGAATGTAATATTACCA+CGG - tig0039039:9165-9184 None:intergenic 30.0%
TAGACAATTCATACATATCC+AGG - tig0039039:9198-9217 None:intergenic 30.0%
!! GTTCAAAGAAGTTATTTTCC+AGG + tig0039039:9595-9614 Msa1457550:CDS 30.0%
GCTTTCAAGGATTCTAAATT+AGG - tig0039039:9787-9806 None:intergenic 30.0%
! ATTTTGTGTTTATAGTGTGG+AGG + tig0039039:10004-10023 Msa1457550:intron 30.0%
! CAGACATTAGTTCAAACTTT+TGG - tig0039039:10037-10056 None:intergenic 30.0%
CAAAAGTTTGAACTAATGTC+TGG + tig0039039:10035-10054 Msa1457550:intron 30.0%
! AAACTAAGGTGTTTATAAGG+TGG - tig0039039:10187-10206 None:intergenic 30.0%
! GGAAAACTAAGGTGTTTATA+AGG - tig0039039:10190-10209 None:intergenic 30.0%
! CTCTTGTTTAAAAACAGTGT+AGG + tig0039039:10346-10365 Msa1457550:intron 30.0%
TTGTTTAAAAACAGTGTAGG+AGG + tig0039039:10349-10368 Msa1457550:intron 30.0%
! AACACTCTTATTTACATCAG+TGG - tig0039039:10379-10398 None:intergenic 30.0%
!! ATATCTAGTATTGGTGTGTT+CGG + tig0039039:10430-10449 Msa1457550:intron 30.0%
ACTATTTAAATTATCCAGCC+AGG + tig0039039:10584-10603 Msa1457550:intron 30.0%
TGGAATTTACTACACAATTC+AGG - tig0039039:10690-10709 None:intergenic 30.0%
TTTCTGTTAAGGTTAGTACT+TGG + tig0039039:11320-11339 Msa1457550:intron 30.0%
CAACTTACAATTGTCATATC+TGG - tig0039039:11470-11489 None:intergenic 30.0%
ATTGTAAGTTGTCATGTTGA+AGG + tig0039039:11479-11498 Msa1457550:CDS 30.0%
AAAAATGTTCAAACCCATGT+GGG + tig0039039:11713-11732 Msa1457550:CDS 30.0%
GGAACCGAAAAATAGTAAAT+AGG - tig0039039:11838-11857 None:intergenic 30.0%
TTGTTCAAATGAGAACAGAA+GGG - tig0039039:11859-11878 None:intergenic 30.0%
TTTGTTCAAATGAGAACAGA+AGG - tig0039039:11860-11879 None:intergenic 30.0%
ATCTTAATCTTCTACAATGC+AGG + tig0039039:11892-11911 Msa1457550:intron 30.0%
GCAATTATAAGAGGAAATAC+TGG - tig0039039:11932-11951 None:intergenic 30.0%
ATGAATATCAAACTTACCTG+GGG - tig0039039:11985-12004 None:intergenic 30.0%
TAGTGGAAGTTAAGGTAAAT+AGG - tig0039039:12011-12030 None:intergenic 30.0%
TCAAAAACTAGTGGAAGTTA+AGG - tig0039039:12019-12038 None:intergenic 30.0%
CCATAAAGTTCAAAAACTAG+TGG - tig0039039:12028-12047 None:intergenic 30.0%
!!! CCACTAGTTTTTGAACTTTA+TGG + tig0039039:12025-12044 Msa1457550:intron 30.0%
AATCGTTCAATCTTCACATA+GGG - tig0039039:12082-12101 None:intergenic 30.0%
AAATCGTTCAATCTTCACAT+AGG - tig0039039:12083-12102 None:intergenic 30.0%
!!! ATCTTTTCTTGAAGTTGATG+TGG - tig0039039:12141-12160 None:intergenic 30.0%
TGCTTCTATTTGCTTTAACT+CGG - tig0039039:12394-12413 None:intergenic 30.0%
!! TCATAGTTGATGGTCATGAA+AGG + tig0039039:204-223 Msa1457550:CDS 35.0%
AGGTCTATTACTGACAATCA+AGG + tig0039039:224-243 Msa1457550:CDS 35.0%
AGGTTATTACAAGCTTGATC+AGG + tig0039039:244-263 Msa1457550:CDS 35.0%
CTTGATCAGGTATTAGTATG+AGG + tig0039039:257-276 Msa1457550:intron 35.0%
CCTATACTGAAAGTTAACTG+AGG - tig0039039:344-363 None:intergenic 35.0%
CCTCAGTTAACTTTCAGTAT+AGG + tig0039039:341-360 Msa1457550:intron 35.0%
!! TGGTGTTATAAAACTCAGAC+CGG + tig0039039:437-456 Msa1457550:intron 35.0%
TTATAAAACTCAGACCGGAT+CGG + tig0039039:442-461 Msa1457550:intron 35.0%
GCATCCTTACTAATATGAAC+CGG + tig0039039:528-547 Msa1457550:intron 35.0%
TTACTAATATGAACCGGTCT+CGG + tig0039039:534-553 Msa1457550:intron 35.0%
! AATCATTTGGACCTTTTGGA+GGG - tig0039039:621-640 None:intergenic 35.0%
! TCTGAATCATTTGGACCTTT+TGG - tig0039039:625-644 None:intergenic 35.0%
TAAACATACCCAACAAGGTA+AGG - tig0039039:907-926 None:intergenic 35.0%
TCTTTGTGGTTTAGTTAGGA+TGG + tig0039039:1253-1272 Msa1457550:CDS 35.0%
TTAGTTAGGATGGTTAGTAG+CGG + tig0039039:1263-1282 Msa1457550:CDS 35.0%
ACCAAGAAAACTACAGAAAG+GGG - tig0039039:1312-1331 None:intergenic 35.0%
!! CCATCTGTTTGTTTCTTTTG+TGG - tig0039039:1416-1435 None:intergenic 35.0%
CCACAAAAGAAACAAACAGA+TGG + tig0039039:1413-1432 Msa1457550:CDS 35.0%
AAATGGGAATTTCTGCTTTG+AGG + tig0039039:1436-1455 Msa1457550:CDS 35.0%
CTACGAGATAAAACAAAAGG+GGG - tig0039039:1495-1514 None:intergenic 35.0%
TATCTCGTAGTGATTATTGG+AGG + tig0039039:1505-1524 Msa1457550:intron 35.0%
AGTCTCAAACTTTAACAGGA+AGG + tig0039039:1683-1702 Msa1457550:intron 35.0%
TTTAATGTCTAGGTTCTTCC+TGG + tig0039039:2122-2141 Msa1457550:intron 35.0%
CACAAAAGACTAAAGGCAAA+AGG - tig0039039:2318-2337 None:intergenic 35.0%
CATGTAGCACAAAAGACTAA+AGG - tig0039039:2325-2344 None:intergenic 35.0%
ATGCTGAACTATGATGACAA+GGG - tig0039039:2382-2401 None:intergenic 35.0%
CATAGATTCATAGTCTTCGT+TGG + tig0039039:2831-2850 Msa1457550:intron 35.0%
GCATCAATAACATCAGAGTA+AGG - tig0039039:2909-2928 None:intergenic 35.0%
TCTGATGTTATTGATGCCAA+AGG + tig0039039:2912-2931 Msa1457550:intron 35.0%
ATGAGCACAACTCAGAAAAA+GGG - tig0039039:2962-2981 None:intergenic 35.0%
CATTAGAGGTTCATATCATC+GGG - tig0039039:3040-3059 None:intergenic 35.0%
CCATTAGAGGTTCATATCAT+CGG - tig0039039:3041-3060 None:intergenic 35.0%
TTCTGCAGCTAGATCTTATA+TGG + tig0039039:3075-3094 Msa1457550:intron 35.0%
GTGGTTGAATGTGAAGTTAT+TGG + tig0039039:3118-3137 Msa1457550:intron 35.0%
GTTGAATGTGAAGTTATTGG+TGG + tig0039039:3121-3140 Msa1457550:intron 35.0%
!!! CCATTTTTAAAACCCTGCTT+GGG - tig0039039:3209-3228 None:intergenic 35.0%
!!! CCAAGCAGGGTTTTAAAAAT+GGG + tig0039039:3207-3226 Msa1457550:intron 35.0%
! GTTCAAGTTAAACGAATCAC+AGG - tig0039039:3305-3324 None:intergenic 35.0%
TAAAAGCAAGGCATATATCC+TGG - tig0039039:3446-3465 None:intergenic 35.0%
AAACAGAAATTCACTACGCT+CGG - tig0039039:3653-3672 None:intergenic 35.0%
! CTGTTTTCAGATGTTATTCC+TGG + tig0039039:3667-3686 Msa1457550:CDS 35.0%
GGTTACATAAATCAACCAGA+TGG + tig0039039:4040-4059 Msa1457550:CDS 35.0%
! ATTGACTCATGTGTCTTCTT+TGG + tig0039039:4234-4253 Msa1457550:CDS 35.0%
TTGACTCATGTGTCTTCTTT+GGG + tig0039039:4235-4254 Msa1457550:CDS 35.0%
! CTTTTCTCCTTTTAGATGGA+TGG - tig0039039:4405-4424 None:intergenic 35.0%
! GATGCTTTTCTCCTTTTAGA+TGG - tig0039039:4409-4428 None:intergenic 35.0%
GGACAAATAAATGTCCTTTC+CGG + tig0039039:4437-4456 Msa1457550:CDS 35.0%
GATATTTATCATGAAGGAGC+TGG + tig0039039:4494-4513 Msa1457550:CDS 35.0%
ATTTGTTTCATCTTTCCCGT+GGG - tig0039039:4552-4571 None:intergenic 35.0%
TATTTGTTTCATCTTTCCCG+TGG - tig0039039:4553-4572 None:intergenic 35.0%
CTGTCTTTGAGTATTCTGTT+TGG + tig0039039:4576-4595 Msa1457550:CDS 35.0%
! ACAAAGTTAAGCTTTTCTCC+TGG - tig0039039:4608-4627 None:intergenic 35.0%
AAAGCTTAACTTTGTTCCTC+GGG + tig0039039:4613-4632 Msa1457550:CDS 35.0%
AAACTATTGTGTAGAGAGCT+AGG + tig0039039:4912-4931 Msa1457550:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - tig0039039:5196-5215 None:intergenic 35.0%
TTAGGCCTCATATTTCAACA+TGG + tig0039039:5212-5231 Msa1457550:intron 35.0%
ATCAGAGCTTGTCAAATTCA+AGG + tig0039039:5236-5255 Msa1457550:intron 35.0%
TCAGAGCTTGTCAAATTCAA+GGG + tig0039039:5237-5256 Msa1457550:intron 35.0%
TCGGATAGATAAGACTCATA+AGG + tig0039039:5484-5503 Msa1457550:intron 35.0%
CGGATAGATAAGACTCATAA+GGG + tig0039039:5485-5504 Msa1457550:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - tig0039039:5196-5215 None:intergenic 35.0%
TGCACACAATTTGTGATTCT+GGG + tig0039039:5901-5920 Msa1457550:intron 35.0%
TCAATACTACAAAGAGGGAA+GGG - tig0039039:5992-6011 None:intergenic 35.0%
TTCAATACTACAAAGAGGGA+AGG - tig0039039:5993-6012 None:intergenic 35.0%
GTTACTTACATGATGTTCTC+TGG - tig0039039:6114-6133 None:intergenic 35.0%
TCATGTAAGTAACAAAGGAG+AGG + tig0039039:6121-6140 Msa1457550:intron 35.0%
! TTTGCTAAACCCATTTTCGT+AGG + tig0039039:6198-6217 Msa1457550:intron 35.0%
TCACTGATACCTACGAAAAT+GGG - tig0039039:6210-6229 None:intergenic 35.0%
AGTATCACTGGACTTAAAAG+TGG + tig0039039:6352-6371 Msa1457550:CDS 35.0%
TAACCAACATCATCATACAG+AGG - tig0039039:6430-6449 None:intergenic 35.0%
TCTATTGGTATTTGGTTGTG+TGG - tig0039039:6937-6956 None:intergenic 35.0%
AAAACAAAGGGATGGTCTAT+TGG - tig0039039:6952-6971 None:intergenic 35.0%
!!! ATAGACCATCCCTTTGTTTT+CGG + tig0039039:6952-6971 Msa1457550:intron 35.0%
GAGAATGAAACCGAAAACAA+AGG - tig0039039:6965-6984 None:intergenic 35.0%
! ACTAATTGGTATTGAGAAGG+TGG + tig0039039:7046-7065 Msa1457550:intron 35.0%
CCGATTGACAACAATTCAAT+TGG - tig0039039:7138-7157 None:intergenic 35.0%
TTGTCAATCGGTATGATGTA+GGG + tig0039039:7147-7166 Msa1457550:intron 35.0%
TTTGTATATGCACCAAGGAT+TGG - tig0039039:7225-7244 None:intergenic 35.0%
AGAGATTTGTATATGCACCA+AGG - tig0039039:7230-7249 None:intergenic 35.0%
TTATGTTTGCACAGATTGAC+AGG + tig0039039:7310-7329 Msa1457550:intron 35.0%
AGACCTTCATGAAAATGAGT+GGG - tig0039039:8281-8300 None:intergenic 35.0%
TAGACCTTCATGAAAATGAG+TGG - tig0039039:8280-8299 None:intergenic 35.0%
!! CAGCACCAATTAGTTTCTTT+TGG - tig0039039:7783-7802 None:intergenic 35.0%
TAGACCTTCATGAAAATGAG+TGG + tig0039039:8280-8299 Msa1457550:intron 35.0%
AGACCTTCATGAAAATGAGT+GGG + tig0039039:8281-8300 Msa1457550:intron 35.0%
AGAACTAGGTAGTGTGTATA+AGG + tig0039039:8400-8419 Msa1457550:intron 35.0%
TATTGGTCATGGATAAATGC+GGG - tig0039039:8549-8568 None:intergenic 35.0%
! AAGTCTTATACACACTACCT+AGG - tig0039039:8634-8653 None:intergenic 35.0%
! CAATCTTTTGGACTTGACTA+AGG + tig0039039:8676-8695 Msa1457550:intron 35.0%
!!! CAGAAGGCCATTTTTAGTTT+TGG + tig0039039:8865-8884 Msa1457550:intron 35.0%
TTCTGACAACTAAAGGAATG+AGG - tig0039039:8946-8965 None:intergenic 35.0%
CTCAAAGATAACAGAACTGA+AGG - tig0039039:9021-9040 None:intergenic 35.0%
TCAGTTCTGTTATCTTTGAG+TGG + tig0039039:9021-9040 Msa1457550:CDS 35.0%
TAGAAACAACTCAGTATCTG+GGG + tig0039039:9056-9075 Msa1457550:CDS 35.0%
CAGTATCATACCTTCAAAAC+AGG - tig0039039:9135-9154 None:intergenic 35.0%
!!! CTGTTTTGAAGGTATGATAC+TGG + tig0039039:9133-9152 Msa1457550:intron 35.0%
TGCTTCAATGTTATCTGGAT+AGG - tig0039039:9416-9435 None:intergenic 35.0%
TCCAGATAACATTGAAGCAT+AGG + tig0039039:9417-9436 Msa1457550:intron 35.0%
TCCTATGCTTCAATGTTATC+TGG - tig0039039:9421-9440 None:intergenic 35.0%
ATACTTGAAATGCAGTAAGC+TGG - tig0039039:9707-9726 None:intergenic 35.0%
!!! AGATATCTTTTTTGGGTGCA+AGG - tig0039039:9852-9871 None:intergenic 35.0%
TGCACCCAAAAAAGATATCT+AGG + tig0039039:9852-9871 Msa1457550:intron 35.0%
! ATCTTTTCTTTCCGTATGTC+TGG + tig0039039:9909-9928 Msa1457550:intron 35.0%
! TAGTTCAAACTTTTGGACCA+TGG - tig0039039:10030-10049 None:intergenic 35.0%
CTATTTCCAACACTCCAATT+GGG - tig0039039:10104-10123 None:intergenic 35.0%
ACTATTTCCAACACTCCAAT+TGG - tig0039039:10105-10124 None:intergenic 35.0%
! ATTTTGTGTTTATAGGCCCA+TGG + tig0039039:10130-10149 Msa1457550:intron 35.0%
! TAGTTCAACTTTTGGACCAT+GGG - tig0039039:10149-10168 None:intergenic 35.0%
! TTAGTTCAACTTTTGGACCA+TGG - tig0039039:10150-10169 None:intergenic 35.0%
TGGTCCAAAAGTTGAACTAA+TGG + tig0039039:10150-10169 Msa1457550:intron 35.0%
! GACTCCATTAGTTCAACTTT+TGG - tig0039039:10157-10176 None:intergenic 35.0%
TTAAGAAGTCCCATGTAGTA+GGG - tig0039039:10218-10237 None:intergenic 35.0%
AGGACAACTACACATTCAAA+TGG - tig0039039:10710-10729 None:intergenic 35.0%
TGAATGTGTAGTTGTCCTAA+CGG + tig0039039:10712-10731 Msa1457550:intron 35.0%
CCTAACGTTGCAAAATAAGA+AGG - tig0039039:10829-10848 None:intergenic 35.0%
!!! CCTTCTTATTTTGCAACGTT+AGG + tig0039039:10826-10845 Msa1457550:intron 35.0%
! AAGTTAGAAAGTACAGGCAA+GGG - tig0039039:11044-11063 None:intergenic 35.0%
! AGAGTGAAGTTAGAAAGTAC+AGG - tig0039039:11050-11069 None:intergenic 35.0%
TGTACTTTCTAACTTCACTC+TGG + tig0039039:11049-11068 Msa1457550:intron 35.0%
!! AGTGTCAAAAGGCTATTTTG+AGG + tig0039039:11168-11187 Msa1457550:CDS 35.0%
! TTGATAGCATAGACAGTATC+AGG - tig0039039:11241-11260 None:intergenic 35.0%
ATGCTATCAAAGTCGCTAAA+AGG + tig0039039:11251-11270 Msa1457550:CDS 35.0%
TGCTATCAAAGTCGCTAAAA+GGG + tig0039039:11252-11271 Msa1457550:CDS 35.0%
TCCAGATTCTCTTTCTGTTA+AGG + tig0039039:11309-11328 Msa1457550:CDS 35.0%
ACCTTAACAGAAAGAGAATC+TGG - tig0039039:11313-11332 None:intergenic 35.0%
AGTTGTCATGTTGAAGGAAA+CGG + tig0039039:11485-11504 Msa1457550:CDS 35.0%
AACATCTGATGGTAGAAATC+AGG + tig0039039:11525-11544 Msa1457550:CDS 35.0%
ACTTGGAAGAAGTTCGAAAT+TGG - tig0039039:11593-11612 None:intergenic 35.0%
CAAATCTAAGTGAGCTTGAT+GGG - tig0039039:11664-11683 None:intergenic 35.0%
TCAAATCTAAGTGAGCTTGA+TGG - tig0039039:11665-11684 None:intergenic 35.0%
CAAAAATGTTCAAACCCATG+TGG + tig0039039:11712-11731 Msa1457550:CDS 35.0%
TTCAATCTTCACATAGGGTT+AGG - tig0039039:12077-12096 None:intergenic 35.0%
! TAAGTTTTCTTTCGCAACGT+TGG - tig0039039:12173-12192 None:intergenic 35.0%
GTTATACTGCTGTATTCCTT+TGG - tig0039039:12215-12234 None:intergenic 35.0%
TATAACGACTGCTCTTAGTT+GGG + tig0039039:12229-12248 Msa1457550:three_prime_UTR 35.0%
AACAAATGGGACAAAACGTT+CGG - tig0039039:12461-12480 None:intergenic 35.0%
! CAGGTAACTGGATTTTCTGT+CGG + tig0039039:134-153 Msa1457550:CDS 40.0%
! AGGTAACTGGATTTTCTGTC+GGG + tig0039039:135-154 Msa1457550:CDS 40.0%
!! TGTAGTTGATGGAAACGACA+TGG + tig0039039:163-182 Msa1457550:CDS 40.0%
!! GTAGTTGATGGAAACGACAT+GGG + tig0039039:164-183 Msa1457550:CDS 40.0%
GGTGTCAAGATCATAGTTGA+TGG + tig0039039:194-213 Msa1457550:CDS 40.0%
ATCAGTCAAATTGACCGATC+CGG - tig0039039:459-478 None:intergenic 40.0%
ATTTGACTGATTAACCAGCC+AGG + tig0039039:468-487 Msa1457550:intron 40.0%
TAACCAGCCAGGTGATTAAT+TGG + tig0039039:479-498 Msa1457550:intron 40.0%
! GAGACCGGTTCATATTAGTA+AGG - tig0039039:535-554 None:intergenic 40.0%
! GAATCATTTGGACCTTTTGG+AGG - tig0039039:622-641 None:intergenic 40.0%
AGTGAATTTAGTGTCAACGC+AGG + tig0039039:683-702 Msa1457550:intron 40.0%
TGCTTCTATGGTATAGTGTG+TGG - tig0039039:986-1005 None:intergenic 40.0%
CACACTATACCATAGAAGCA+AGG + tig0039039:986-1005 Msa1457550:CDS 40.0%
ATGCTTCTTCCTTGCTTCTA+TGG - tig0039039:998-1017 None:intergenic 40.0%
TTCAGTCGTTGTGAAAAGCT+TGG + tig0039039:1125-1144 Msa1457550:intron 40.0%
TATTTGGCAATACCTGAGCA+AGG - tig0039039:1196-1215 None:intergenic 40.0%
! TGCTCAGGTATTGCCAAATA+TGG + tig0039039:1196-1215 Msa1457550:intron 40.0%
GCCGTTTCATATGATCTTTG+TGG + tig0039039:1239-1258 Msa1457550:CDS 40.0%
CCAAGAAAACTACAGAAAGG+GGG - tig0039039:1311-1330 None:intergenic 40.0%
!! TATTAGGTGGCTTTGACTCA+TGG + tig0039039:1374-1393 Msa1457550:intron 40.0%
! TATTGGAGGACAATTTGCTC+AGG + tig0039039:1519-1538 Msa1457550:intron 40.0%
CTCAGGCTTAAAGAGAAATG+TGG + tig0039039:1536-1555 Msa1457550:intron 40.0%
AGGCTTAAAGAGAAATGTGG+CGG + tig0039039:1539-1558 Msa1457550:intron 40.0%
!! AAAGAGAAATGTGGCGGATT+AGG + tig0039039:1545-1564 Msa1457550:intron 40.0%
TAATTGCAGTTGGCATGTCT+AGG + tig0039039:1612-1631 Msa1457550:intron 40.0%
AATTGCAGTTGGCATGTCTA+GGG + tig0039039:1613-1632 Msa1457550:intron 40.0%
GTACATGATCACTGCTTTCA+GGG - tig0039039:1792-1811 None:intergenic 40.0%
TGTACATGATCACTGCTTTC+AGG - tig0039039:1793-1812 None:intergenic 40.0%
AATCTATTGTGAAGGGGTTC+AGG + tig0039039:1912-1931 Msa1457550:intron 40.0%
GAAGCGGTACTAAAGAAAGT+AGG - tig0039039:2051-2070 None:intergenic 40.0%
TACATGCATGCCAAACTATG+CGG + tig0039039:2339-2358 Msa1457550:intron 40.0%
CATGCTGAACTATGATGACA+AGG - tig0039039:2383-2402 None:intergenic 40.0%
TCAGTAATGACATCTCAACG+TGG + tig0039039:2650-2669 Msa1457550:intron 40.0%
GCCTTCTACAATCGTTTCAA+CGG - tig0039039:2776-2795 None:intergenic 40.0%
GATGAGCACAACTCAGAAAA+AGG - tig0039039:2963-2982 None:intergenic 40.0%
TTTCTGAGTTGTGCTCATCA+AGG + tig0039039:2964-2983 Msa1457550:intron 40.0%
! CAAGGATGAGTTGAACAAGA+TGG + tig0039039:2982-3001 Msa1457550:intron 40.0%
CCGATGATATGAACCTCTAA+TGG + tig0039039:3038-3057 Msa1457550:intron 40.0%
TCCACAATAATTACCCAAGC+AGG + tig0039039:3193-3212 Msa1457550:intron 40.0%
CCACAATAATTACCCAAGCA+GGG + tig0039039:3194-3213 Msa1457550:intron 40.0%
!!! CCCAAGCAGGGTTTTAAAAA+TGG + tig0039039:3206-3225 Msa1457550:intron 40.0%
!!! CCCATTTTTAAAACCCTGCT+TGG - tig0039039:3210-3229 None:intergenic 40.0%
!! TGCTTTCCCGTCATTTTCTT+TGG + tig0039039:3405-3424 Msa1457550:intron 40.0%
!! GCTTTCCCGTCATTTTCTTT+GGG + tig0039039:3406-3425 Msa1457550:intron 40.0%
ATATATCCTGGTCCAAATGG+GGG - tig0039039:3434-3453 None:intergenic 40.0%
CATATATCCTGGTCCAAATG+GGG - tig0039039:3435-3454 None:intergenic 40.0%
GCATATATCCTGGTCCAAAT+GGG - tig0039039:3436-3455 None:intergenic 40.0%
CCTCACAGCATATAAAAGCA+AGG - tig0039039:3458-3477 None:intergenic 40.0%
!! CCTTGCTTTTATATGCTGTG+AGG + tig0039039:3455-3474 Msa1457550:intron 40.0%
! TTTGTTTGCTGCGTGATTGT+AGG + tig0039039:3507-3526 Msa1457550:intron 40.0%
ACAAGAGTCACAGATACAGA+TGG - tig0039039:3580-3599 None:intergenic 40.0%
!!! TGCTGCTTTTTGTTCAGCAT+TGG + tig0039039:3807-3826 Msa1457550:intron 40.0%
! ATCTTCCATGGTCACTGATT+CGG - tig0039039:3903-3922 None:intergenic 40.0%
CAGTGACCATGGAAGATAAT+TGG + tig0039039:3906-3925 Msa1457550:CDS 40.0%
! CATGGAAGATAATTGGTGCT+GGG + tig0039039:3913-3932 Msa1457550:CDS 40.0%
AACAATTCCTTCGAAGTCCT+CGG - tig0039039:3969-3988 None:intergenic 40.0%
ATCTCCACTCATGATGTTGA+TGG + tig0039039:4019-4038 Msa1457550:CDS 40.0%
GTAACCATCAACATCATGAG+TGG - tig0039039:4026-4045 None:intergenic 40.0%
AAATTCACAGTTGACCCATC+TGG - tig0039039:4058-4077 None:intergenic 40.0%
GGGTATTTGTATTCGATCGT+TGG + tig0039039:4086-4105 Msa1457550:intron 40.0%
! TTGTGTTGTTACCTGCAGAA+AGG + tig0039039:4162-4181 Msa1457550:intron 40.0%
TTGTAGCCCATCCATCTAAA+AGG + tig0039039:4395-4414 Msa1457550:intron 40.0%
! GTTAAGCTTTTCTCCTGGAT+TGG - tig0039039:4603-4622 None:intergenic 40.0%
!! TGGCTTTTGCTGTGAAAGAA+AGG + tig0039039:4694-4713 Msa1457550:intron 40.0%
GTGAAAGAAAGGATCAAGAG+AGG + tig0039039:4705-4724 Msa1457550:intron 40.0%
AGGCTGTACACAGTCAAATT+GGG - tig0039039:4781-4800 None:intergenic 40.0%
TTAGGACAGTTAGCATGAGA+TGG - tig0039039:4840-4859 None:intergenic 40.0%
TTAGGACAGTTAGCATGAGA+TGG - tig0039039:4840-4859 None:intergenic 40.0%
! GACTTGGGTTTTTCCCAATA+AGG - tig0039039:5108-5127 None:intergenic 40.0%
! TGAGTCTTATCTATCCGATG+TGG - tig0039039:5131-5150 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + tig0039039:5194-5213 Msa1457550:intron 40.0%
ATCCGAGCTTGTCAAATTCA+AGG + tig0039039:5355-5374 Msa1457550:intron 40.0%
TCCGAGCTTGTCAAATTCAA+GGG + tig0039039:5356-5375 Msa1457550:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG - tig0039039:5130-5149 None:intergenic 40.0%
! TGAGTCTTATCTATCCGATG+TGG - tig0039039:5131-5150 None:intergenic 40.0%
GAAAAACCTAAGTCCCACAT+CGG + tig0039039:5595-5614 Msa1457550:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG - tig0039039:5130-5149 None:intergenic 40.0%
! TGAGTCTTATCTATCCGATG+TGG - tig0039039:5131-5150 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + tig0039039:5194-5213 Msa1457550:intron 40.0%
CTGCACACAATTTGTGATTC+TGG + tig0039039:5900-5919 Msa1457550:intron 40.0%
ACACAATTTGTGATTCTGGG+AGG + tig0039039:5904-5923 Msa1457550:intron 40.0%
TACAAAGAGGGAAGGGAAAA+TGG - tig0039039:5985-6004 None:intergenic 40.0%
GTCACTGATACCTACGAAAA+TGG - tig0039039:6211-6230 None:intergenic 40.0%
! TCCTACATTTTCTTGTCGGT+TGG + tig0039039:6255-6274 Msa1457550:CDS 40.0%
!! CCTACATTTTCTTGTCGGTT+GGG + tig0039039:6256-6275 Msa1457550:CDS 40.0%
CGGTTGGGTGTATATATTGA+AGG + tig0039039:6271-6290 Msa1457550:CDS 40.0%
ATATGAACACCAGAAAGAGG+AGG - tig0039039:6307-6326 None:intergenic 40.0%
CTGATATGAACACCAGAAAG+AGG - tig0039039:6310-6329 None:intergenic 40.0%
! CTCTTTCTGGTGTTCATATC+AGG + tig0039039:6308-6327 Msa1457550:CDS 40.0%
! CATATCAGGATTTTTGCTGC+TGG + tig0039039:6322-6341 Msa1457550:CDS 40.0%
CTAATACTTGAAACGACCAC+CGG + tig0039039:6379-6398 Msa1457550:CDS 40.0%
! ACTGCTTTAGACAATGCAAC+TGG - tig0039039:6566-6585 None:intergenic 40.0%
AGGGATGGTCTATTGGTATT+TGG - tig0039039:6945-6964 None:intergenic 40.0%
TGAAACCGAAAACAAAGGGA+TGG - tig0039039:6960-6979 None:intergenic 40.0%
GTTGTCAATCGGTATGATGT+AGG + tig0039039:7146-7165 Msa1457550:intron 40.0%
TCAATGAATTCGTTGACACC+AGG + tig0039039:7430-7449 Msa1457550:intron 40.0%
TATATATATCCGTTGACGCC+TGG - tig0039039:7451-7470 None:intergenic 40.0%
! AGACCCACTCATTTTCATGA+AGG + tig0039039:7499-7518 Msa1457550:intron 40.0%
GATTTGGACACAAAAACCCT+TGG + tig0039039:7547-7566 Msa1457550:intron 40.0%
GACGTATGAAATAGAAGAGG+CGG - tig0039039:7676-7695 None:intergenic 40.0%
GGAGACGTATGAAATAGAAG+AGG - tig0039039:7679-7698 None:intergenic 40.0%
GGTAGATACAGGAACAACAA+AGG - tig0039039:7700-7719 None:intergenic 40.0%
!! GTTTCTTTTGGAAGCAAGCA+CGG - tig0039039:7771-7790 None:intergenic 40.0%
GAATTGCAGCATGATAGAGA+AGG + tig0039039:8093-8112 Msa1457550:intron 40.0%
GATTTGGACACAAAAACCCT+TGG - tig0039039:7547-7566 None:intergenic 40.0%
! AGACCCACTCATTTTCATGA+AGG - tig0039039:7499-7518 None:intergenic 40.0%
TAGGTAGTGTGTATAAGGCT+TGG + tig0039039:8405-8424 Msa1457550:intron 40.0%
AGGTAGTGTGTATAAGGCTT+GGG + tig0039039:8406-8425 Msa1457550:intron 40.0%
CAGACTTATGAAGTTGAGCT+AGG + tig0039039:8448-8467 Msa1457550:intron 40.0%
GTGTATGGGCTTGGATATAT+TGG - tig0039039:8566-8585 None:intergenic 40.0%
AAAGATTGCCTTGTAAGGTG+AGG - tig0039039:8664-8683 None:intergenic 40.0%
! CACCTTACAAGGCAATCTTT+TGG + tig0039039:8664-8683 Msa1457550:intron 40.0%
GTCCAAAAGATTGCCTTGTA+AGG - tig0039039:8669-8688 None:intergenic 40.0%
!! ACATAAGTGCTGAATGCAGA+AGG + tig0039039:8849-8868 Msa1457550:intron 40.0%
TCCTTTAGTTGTCAGAAGCT+TGG + tig0039039:8949-8968 Msa1457550:CDS 40.0%
ACCAAGCTTCTGACAACTAA+AGG - tig0039039:8953-8972 None:intergenic 40.0%
TATGATACTGGACATAACCG+TGG + tig0039039:9145-9164 Msa1457550:intron 40.0%
ACCTCAACAAAGAGAGTAAC+AGG + tig0039039:9298-9317 Msa1457550:intron 40.0%
! AGGTGAGAAAGCATATTCCT+AGG - tig0039039:9543-9562 None:intergenic 40.0%
AAGCAATTGAGCTCGAATCA+GGG + tig0039039:9570-9589 Msa1457550:CDS 40.0%
GAGAAATGAGACCAGACATA+CGG - tig0039039:9923-9942 None:intergenic 40.0%
GAATATGGCACAAACCCAAT+TGG + tig0039039:9960-9979 Msa1457550:intron 40.0%
TATGTTCCTACGCTCCAATT+GGG - tig0039039:9977-9996 None:intergenic 40.0%
GTAGGGAACAAGGAAAACTA+AGG - tig0039039:10201-10220 None:intergenic 40.0%
TTTCCTTGTTCCCTACTACA+TGG + tig0039039:10205-10224 Msa1457550:intron 40.0%
TTCCTTGTTCCCTACTACAT+GGG + tig0039039:10206-10225 Msa1457550:intron 40.0%
GTTAAGAAGTCCCATGTAGT+AGG - tig0039039:10219-10238 None:intergenic 40.0%
!! TAAGAGTGTTCTGTAACCCT+TGG + tig0039039:10389-10408 Msa1457550:intron 40.0%
!! AAGAGTGTTCTGTAACCCTT+GGG + tig0039039:10390-10409 Msa1457550:intron 40.0%
ACTAAAAAGCCTTTCCCCAA+GGG - tig0039039:10408-10427 None:intergenic 40.0%
AACTAAAAAGCCTTTCCCCA+AGG - tig0039039:10409-10428 None:intergenic 40.0%
!! TAGTATTGGTGTGTTCGGAT+TGG + tig0039039:10435-10454 Msa1457550:intron 40.0%
!! AGTATTGGTGTGTTCGGATT+GGG + tig0039039:10436-10455 Msa1457550:intron 40.0%
! CTGGTTTGCAAATGACAGTA+GGG - tig0039039:10553-10572 None:intergenic 40.0%
TAAATAGTTGAAGTGGAGCC+TGG - tig0039039:10572-10591 None:intergenic 40.0%
AATGACGACTTTCATGTACC+TGG - tig0039039:10605-10624 None:intergenic 40.0%
CATGTAGATTCGACGATCAA+CGG + tig0039039:10634-10653 Msa1457550:intron 40.0%
ATGTAGATTCGACGATCAAC+GGG + tig0039039:10635-10654 Msa1457550:intron 40.0%
GAATGTGTAGTTGTCCTAAC+GGG + tig0039039:10713-10732 Msa1457550:intron 40.0%
AATAATTCCGTCAACCCGTT+AGG - tig0039039:10730-10749 None:intergenic 40.0%
TGCAACATGCATGATTACAG+TGG + tig0039039:10795-10814 Msa1457550:intron 40.0%
TATTGCTGATGATAGGGTGA+CGG + tig0039039:10885-10904 Msa1457550:intron 40.0%
AGGCTGTCAGTAATTTCTCT+GGG - tig0039039:10928-10947 None:intergenic 40.0%
AAGGCTGTCAGTAATTTCTC+TGG - tig0039039:10929-10948 None:intergenic 40.0%
TTTACCTAACCACTGAGCAA+CGG + tig0039039:10947-10966 Msa1457550:intron 40.0%
! GAAGTTAGAAAGTACAGGCA+AGG - tig0039039:11045-11064 None:intergenic 40.0%
TCAACTGAAACTCCTCCTTT+GGG - tig0039039:11139-11158 None:intergenic 40.0%
TTCAACTGAAACTCCTCCTT+TGG - tig0039039:11140-11159 None:intergenic 40.0%
! AATAGCCTTTTGACACTGAC+CGG - tig0039039:11165-11184 None:intergenic 40.0%
AAACCGTAACAGATTCGTCT+GGG + tig0039039:11191-11210 Msa1457550:CDS 40.0%
ATTCCCAGACGAATCTGTTA+CGG - tig0039039:11197-11216 None:intergenic 40.0%
AGTCGCTAAAAGGGATGTTA+TGG + tig0039039:11261-11280 Msa1457550:CDS 40.0%
TAAACCAACCAGTTTACACC+AGG - tig0039039:11390-11409 None:intergenic 40.0%
!! ACTGGTTGGTTTATGTTTCC+AGG + tig0039039:11397-11416 Msa1457550:intron 40.0%
! GTTGGTTTATGTTTCCAGGT+TGG + tig0039039:11401-11420 Msa1457550:intron 40.0%
GTTGGAACTGAGGATATCAA+GGG + tig0039039:11419-11438 Msa1457550:CDS 40.0%
AACTGAGGATATCAAGGGTT+TGG + tig0039039:11424-11443 Msa1457550:CDS 40.0%
TCATGTTGAAGGAAACGGTA+CGG + tig0039039:11490-11509 Msa1457550:CDS 40.0%
TGAGCTTCGTAAACATCTGA+TGG + tig0039039:11514-11533 Msa1457550:CDS 40.0%
AAGAAGTTCGAAATTGGCAG+GGG - tig0039039:11587-11606 None:intergenic 40.0%
GAAGAAGTTCGAAATTGGCA+GGG - tig0039039:11588-11607 None:intergenic 40.0%
TTCGAACTTCTTCCAAGTGA+AGG + tig0039039:11595-11614 Msa1457550:CDS 40.0%
TCGAACTTCTTCCAAGTGAA+GGG + tig0039039:11596-11615 Msa1457550:CDS 40.0%
TGATATCATTGAGGTCGACT+TGG + tig0039039:11688-11707 Msa1457550:CDS 40.0%
CATCAATCCTGTATCTCAGT+GGG - tig0039039:11739-11758 None:intergenic 40.0%
TCATCAATCCTGTATCTCAG+TGG - tig0039039:11740-11759 None:intergenic 40.0%
ATAAGAGGAAATACTGGTGC+TGG - tig0039039:11926-11945 None:intergenic 40.0%
AATCTTCACATAGGGTTAGG+AGG - tig0039039:12074-12093 None:intergenic 40.0%
CAACTTCAAGAAAAGATGCG+AGG + tig0039039:12144-12163 Msa1457550:CDS 40.0%
ATACTGCTGTATTCCTTTGG+TGG - tig0039039:12212-12231 None:intergenic 40.0%
GTATAACGACTGCTCTTAGT+TGG + tig0039039:12228-12247 Msa1457550:three_prime_UTR 40.0%
CATCATTCACGTACTCTCAT+AGG + tig0039039:12261-12280 Msa1457550:three_prime_UTR 40.0%
! GGTAACTGGATTTTCTGTCG+GGG + tig0039039:136-155 Msa1457550:CDS 45.0%
! GTAACTGGATTTTCTGTCGG+GGG + tig0039039:137-156 Msa1457550:CDS 45.0%
AGACCAATTAATCACCTGGC+TGG - tig0039039:485-504 None:intergenic 45.0%
GCTCAGACCAATTAATCACC+TGG - tig0039039:489-508 None:intergenic 45.0%
! GTCTGAGCATCGTACTAGAT+TGG + tig0039039:501-520 Msa1457550:intron 45.0%
TCAGCAGTTCCTTACCTTGT+TGG + tig0039039:895-914 Msa1457550:intron 45.0%
CAGCAGTTCCTTACCTTGTT+GGG + tig0039039:896-915 Msa1457550:intron 45.0%
TAGTAGCGGTCAGAAAGCAA+CGG + tig0039039:1277-1296 Msa1457550:CDS 45.0%
! CCCCCTTTCTGTAGTTTTCT+TGG + tig0039039:1308-1327 Msa1457550:intron 45.0%
GCATATTCTACTACATGGGC+TGG + tig0039039:1578-1597 Msa1457550:intron 45.0%
! ATTGTGAAGGGGTTCAGGTT+AGG + tig0039039:1917-1936 Msa1457550:intron 45.0%
ATGAGTCCAGCAGCATTATC+GGG - tig0039039:2179-2198 None:intergenic 45.0%
CATGAGTCCAGCAGCATTAT+CGG - tig0039039:2180-2199 None:intergenic 45.0%
ACATGCATGCCAAACTATGC+GGG + tig0039039:2340-2359 Msa1457550:intron 45.0%
! TTTTCAACCCCCGCATAGTT+TGG - tig0039039:2352-2371 None:intergenic 45.0%
GCCGTTGAAACGATTGTAGA+AGG + tig0039039:2772-2791 Msa1457550:intron 45.0%
!! TGTAGAAGGCGTTGACATCA+TGG + tig0039039:2786-2805 Msa1457550:intron 45.0%
!! GTAGAAGGCGTTGACATCAT+GGG + tig0039039:2787-2806 Msa1457550:intron 45.0%
! CATAGTCTTCGTTGGTGAGA+TGG + tig0039039:2839-2858 Msa1457550:intron 45.0%
CCCTGCTTGGGTAATTATTG+TGG - tig0039039:3197-3216 None:intergenic 45.0%
GGGATCCCAAAGAAAATGAC+GGG - tig0039039:3414-3433 None:intergenic 45.0%
GGGGATCCCAAAGAAAATGA+CGG - tig0039039:3415-3434 None:intergenic 45.0%
!! TTTCTTTGGGATCCCCCATT+TGG + tig0039039:3419-3438 Msa1457550:intron 45.0%
GGCATATATCCTGGTCCAAA+TGG - tig0039039:3437-3456 None:intergenic 45.0%
ATCTGTGACTCTTGTCAAGC+AGG + tig0039039:3585-3604 Msa1457550:CDS 45.0%
TCCTGGAAAATACAGGCTTG+AGG + tig0039039:3684-3703 Msa1457550:CDS 45.0%
! ACCTCAAGCCTGTATTTTCC+AGG - tig0039039:3688-3707 None:intergenic 45.0%
!! TCACGCTCCCATTTTGTTTG+TGG + tig0039039:3720-3739 Msa1457550:intron 45.0%
!! TCTTCCATGGTCACTGATTC+GGG - tig0039039:3902-3921 None:intergenic 45.0%
CCAGCACCAATTATCTTCCA+TGG - tig0039039:3915-3934 None:intergenic 45.0%
CCATGGAAGATAATTGGTGC+TGG + tig0039039:3912-3931 Msa1457550:CDS 45.0%
AGATGTAAATGTTGGAGCCG+AGG + tig0039039:3949-3968 Msa1457550:CDS 45.0%
TATGTTGGGAACCTTTCTGC+AGG - tig0039039:4176-4195 None:intergenic 45.0%
ATGCATCATGTAAGCCGGAA+AGG - tig0039039:4454-4473 None:intergenic 45.0%
AGGCAATGCATCATGTAAGC+CGG - tig0039039:4459-4478 None:intergenic 45.0%
TATTCTGTTTGGGCCAATCC+AGG + tig0039039:4587-4606 Msa1457550:CDS 45.0%
CAGGCTGTACACAGTCAAAT+TGG - tig0039039:4782-4801 None:intergenic 45.0%
TGTAGAGAGCTAGGATCAAG+AGG + tig0039039:4921-4940 Msa1457550:intron 45.0%
GTAGAGAGCTAGGATCAAGA+GGG + tig0039039:4922-4941 Msa1457550:intron 45.0%
TAGAGAGCTAGGATCAAGAG+GGG + tig0039039:4923-4942 Msa1457550:intron 45.0%
TGTACACAGTCGATCTTCGT+GGG - tig0039039:4999-5018 None:intergenic 45.0%
TTGTACACAGTCGATCTTCG+TGG - tig0039039:5000-5019 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - tig0039039:5187-5206 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + tig0039039:5184-5203 Msa1457550:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG - tig0039039:5266-5285 None:intergenic 45.0%
GCCCTTGAATTTGACAAGCT+CGG - tig0039039:5241-5260 None:intergenic 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG - tig0039039:5266-5285 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG + tig0039039:5114-5133 Msa1457550:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG - tig0039039:5123-5142 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG - tig0039039:5124-5143 None:intergenic 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG - tig0039039:5266-5285 None:intergenic 45.0%
ATCTATCCGATGTGGGACTT+AGG - tig0039039:5123-5142 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - tig0039039:5187-5206 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + tig0039039:5184-5203 Msa1457550:intron 45.0%
AAGAGGGAAGGGAAAATGGT+GGG - tig0039039:5981-6000 None:intergenic 45.0%
AAAGAGGGAAGGGAAAATGG+TGG - tig0039039:5982-6001 None:intergenic 45.0%
CCCAACCGACAAGAAAATGT+AGG - tig0039039:6259-6278 None:intergenic 45.0%
! GGTCCTCTGTATGATGATGT+TGG + tig0039039:6424-6443 Msa1457550:CDS 45.0%
TAAAGATACCTGACCTTGGG+AGG - tig0039039:6900-6919 None:intergenic 45.0%
CGGTAAAGATACCTGACCTT+GGG - tig0039039:6903-6922 None:intergenic 45.0%
ACGGTAAAGATACCTGACCT+TGG - tig0039039:6904-6923 None:intergenic 45.0%
GTCAGGTATCTTTACCGTTC+AGG + tig0039039:6906-6925 Msa1457550:intron 45.0%
GTTGTGTGGAAGAACCTGAA+CGG - tig0039039:6923-6942 None:intergenic 45.0%
! TATGGATTGCTGCCAATCCT+TGG + tig0039039:7210-7229 Msa1457550:intron 45.0%
!! GCAACCTGCACCTTTTGATT+TGG + tig0039039:7531-7550 Msa1457550:intron 45.0%
! GTGTCCAAATCAAAAGGTGC+AGG - tig0039039:8248-8267 None:intergenic 45.0%
GCAAAACACCATGAGAGAGA+AGG + tig0039039:8053-8072 Msa1457550:intron 45.0%
AAACACCATGAGAGAGAAGG+TGG + tig0039039:8056-8075 Msa1457550:intron 45.0%
! GTGTCCAAATCAAAAGGTGC+AGG + tig0039039:8248-8267 Msa1457550:intron 45.0%
!! GCAACCTGCACCTTTTGATT+TGG - tig0039039:7531-7550 None:intergenic 45.0%
GGGCTTGGATATATTGGTCA+TGG - tig0039039:8560-8579 None:intergenic 45.0%
ATATCCAAGCCCATACACGA+CGG + tig0039039:8568-8587 Msa1457550:intron 45.0%
CACACTAGTCGATATGACCT+AGG + tig0039039:8614-8633 Msa1457550:intron 45.0%
TGAGCATTCCTCACCTTACA+AGG + tig0039039:8653-8672 Msa1457550:intron 45.0%
!! CTATCTGCGTCCTGTTTTGA+AGG + tig0039039:9122-9141 Msa1457550:CDS 45.0%
GCCTGTTACTCTCTTTGTTG+AGG - tig0039039:9302-9321 None:intergenic 45.0%
CAAGCAATTGAGCTCGAATC+AGG + tig0039039:9569-9588 Msa1457550:CDS 45.0%
AGCAATTGAGCTCGAATCAG+GGG + tig0039039:9571-9590 Msa1457550:CDS 45.0%
CTATGTTCCTACGCTCCAAT+TGG - tig0039039:9978-9997 None:intergenic 45.0%
ATTGGAGCGTAGGAACATAG+TGG + tig0039039:9978-9997 Msa1457550:intron 45.0%
TTGGAGCGTAGGAACATAGT+GGG + tig0039039:9979-9998 Msa1457550:intron 45.0%
TGTTTATAGTGTGGAGGCCA+TGG + tig0039039:10010-10029 Msa1457550:intron 45.0%
GAATATGGCACAGACCCAAT+TGG + tig0039039:10087-10106 Msa1457550:intron 45.0%
! AGAGTGTTCTGTAACCCTTG+GGG + tig0039039:10391-10410 Msa1457550:intron 45.0%
! TTCGGATTGGGAAGTTTGAG+TGG + tig0039039:10448-10467 Msa1457550:intron 45.0%
! CCTGGTTTGCAAATGACAGT+AGG - tig0039039:10554-10573 None:intergenic 45.0%
! CCTACTGTCATTTGCAAACC+AGG + tig0039039:10551-10570 Msa1457550:intron 45.0%
TGTAGATTCGACGATCAACG+GGG + tig0039039:10636-10655 Msa1457550:intron 45.0%
!! TAGTTGTCCTAACGGGTTGA+CGG + tig0039039:10720-10739 Msa1457550:intron 45.0%
TATTAGCTGACCCCACTTAG+TGG + tig0039039:10746-10765 Msa1457550:intron 45.0%
ATTAGCTGACCCCACTTAGT+GGG + tig0039039:10747-10766 Msa1457550:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - tig0039039:10759-10778 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - tig0039039:10760-10779 None:intergenic 45.0%
! TGGGATAAGGCTTGGTTGTT+GGG + tig0039039:10766-10785 Msa1457550:intron 45.0%
GTTGCTCAGTGGTTAGGTAA+AGG - tig0039039:10948-10967 None:intergenic 45.0%
! TTAGAAAGTACAGGCAAGGG+AGG - tig0039039:11041-11060 None:intergenic 45.0%
GGCTTAGTCACTCTGTTATC+TGG + tig0039039:11109-11128 Msa1457550:CDS 45.0%
! ATAGCCTTTTGACACTGACC+GGG - tig0039039:11164-11183 None:intergenic 45.0%
GAAACCGTAACAGATTCGTC+TGG + tig0039039:11190-11209 Msa1457550:CDS 45.0%
TCTGGGAATTATCGTCTGAG+AGG + tig0039039:11208-11227 Msa1457550:CDS 45.0%
ATGCTGATCCTGGTGTAAAC+TGG + tig0039039:11379-11398 Msa1457550:intron 45.0%
TGATCCTGGTGTAAACTGGT+TGG + tig0039039:11383-11402 Msa1457550:intron 45.0%
! ATGTTTCCAGGTTGGAACTG+AGG + tig0039039:11409-11428 Msa1457550:intron 45.0%
TGATATCCTCAGTTCCAACC+TGG - tig0039039:11418-11437 None:intergenic 45.0%
GGTTGGAACTGAGGATATCA+AGG + tig0039039:11418-11437 Msa1457550:intron 45.0%
AGAAGTTCGAAATTGGCAGG+GGG - tig0039039:11586-11605 None:intergenic 45.0%
GGAAGAAGTTCGAAATTGGC+AGG - tig0039039:11589-11608 None:intergenic 45.0%
CAAGTGAAGGGCTTATCGAA+GGG + tig0039039:11608-11627 Msa1457550:CDS 45.0%
CACCTTCTACAACTTCGATC+TGG + tig0039039:11635-11654 Msa1457550:CDS 45.0%
GACCAGATCGAAGTTGTAGA+AGG - tig0039039:11640-11659 None:intergenic 45.0%
! GATTGATGATCAGCTGAAGC+AGG + tig0039039:11751-11770 Msa1457550:CDS 45.0%
CACTATTTATCAGCATCCCC+AGG + tig0039039:11966-11985 Msa1457550:CDS 45.0%
TTCACATAGGGTTAGGAGGA+GGG - tig0039039:12070-12089 None:intergenic 45.0%
!! CTTGAAGTTGATGTGGTTCC+CGG - tig0039039:12134-12153 None:intergenic 45.0%
AGTCTCATTGCTACCACCAA+AGG + tig0039039:12196-12215 Msa1457550:exon 45.0%
! TTTGGAGGCGTAGATGCAAA+TGG + tig0039039:12306-12325 Msa1457550:three_prime_UTR 45.0%
!! TATATATATATATATATATG+GGG + tig0039039:7465-7484 Msa1457550:intron 5.0%
!! TATATATACATATATATATA+GGG - tig0039039:8322-8341 None:intergenic 5.0%
!! ATATATATACATATATATAT+AGG - tig0039039:8323-8342 None:intergenic 5.0%
TGATGGAAACGACATGGGAG+TGG + tig0039039:169-188 Msa1457550:CDS 50.0%
TAATATGAACCGGTCTCGGC+TGG + tig0039039:538-557 Msa1457550:intron 50.0%
ATAAAGCAACCAGCCGAGAC+CGG - tig0039039:550-569 None:intergenic 50.0%
TCAAACTCTGCTCCTTGCTC+AGG + tig0039039:1181-1200 Msa1457550:intron 50.0%
GCTGACAAGCGATATTCACC+AGG - tig0039039:2143-2162 None:intergenic 50.0%
CATGCATGCCAAACTATGCG+GGG + tig0039039:2341-2360 Msa1457550:intron 50.0%
ATGCATGCCAAACTATGCGG+GGG + tig0039039:2342-2361 Msa1457550:intron 50.0%
! AGTCTTCGTTGGTGAGATGG+TGG + tig0039039:2842-2861 Msa1457550:intron 50.0%
! GTCTTCGTTGGTGAGATGGT+GGG + tig0039039:2843-2862 Msa1457550:intron 50.0%
! TCTTCGTTGGTGAGATGGTG+GGG + tig0039039:2844-2863 Msa1457550:intron 50.0%
GCACAACTCAGAAAAAGGGC+AGG - tig0039039:2958-2977 None:intergenic 50.0%
GGTGTCAGTGAGATCAGTTG+TGG + tig0039039:3096-3115 Msa1457550:intron 50.0%
GTCAGTGAGATCAGTTGTGG+TGG + tig0039039:3099-3118 Msa1457550:intron 50.0%
TGCTGCGTGATTGTAGGCTT+TGG + tig0039039:3513-3532 Msa1457550:intron 50.0%
! TAGGCTTTGGTCAATGTCCG+TGG + tig0039039:3526-3545 Msa1457550:intron 50.0%
CAGAAATTCACTACGCTCGG+AGG - tig0039039:3650-3669 None:intergenic 50.0%
!! TTCCATGGTCACTGATTCGG+GGG - tig0039039:3900-3919 None:intergenic 50.0%
!! CTTCCATGGTCACTGATTCG+GGG - tig0039039:3901-3920 None:intergenic 50.0%
TATCATGAAGGAGCTGGCGT+TGG + tig0039039:4500-4519 Msa1457550:CDS 50.0%
!! TGGCGTTGGTGATAATGCCA+TGG + tig0039039:4514-4533 Msa1457550:CDS 50.0%
ATGGCCATACTCAAGTCCCA+CGG + tig0039039:4533-4552 Msa1457550:CDS 50.0%
TTTCCCGTGGGACTTGAGTA+TGG - tig0039039:4540-4559 None:intergenic 50.0%
AAAATGTACCTCGAGTCCCG+AGG - tig0039039:4632-4651 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG + tig0039039:5174-5193 Msa1457550:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - tig0039039:5182-5201 None:intergenic 50.0%
GGTGCGTGAATAGGTTTAGG+CGG - tig0039039:5263-5282 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG - tig0039039:5272-5291 None:intergenic 50.0%
! GAGGGGGGTGTATTTCAACA+TGG + tig0039039:5331-5350 Msa1457550:intron 50.0%
GGTGCGTGAATAGGTTTAGG+CGG - tig0039039:5263-5282 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG - tig0039039:5272-5291 None:intergenic 50.0%
GGTGCGTGAATAGGTTTAGG+CGG - tig0039039:5263-5282 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG - tig0039039:5272-5291 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG + tig0039039:5174-5193 Msa1457550:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - tig0039039:5182-5201 None:intergenic 50.0%
! GATTCTGGGAGGTTTCTGTC+TGG + tig0039039:5915-5934 Msa1457550:intron 50.0%
CACAAAGGAGCCATCAGTTC+CGG - tig0039039:6401-6420 None:intergenic 50.0%
ATACAGAGGACCTGCCACAA+AGG - tig0039039:6416-6435 None:intergenic 50.0%
TCAACGAATCCGTTGACACC+TGG - tig0039039:6746-6765 None:intergenic 50.0%
! TCAACGGATTCGTTGACACC+AGG + tig0039039:6750-6769 Msa1457550:intron 50.0%
TCGTTGACACCAGGTGTCAA+CGG + tig0039039:6759-6778 Msa1457550:intron 50.0%
TCAACGAATCCGTTGACACC+TGG - tig0039039:6746-6765 None:intergenic 50.0%
ACACTCTCATCTTCCTCCCA+AGG + tig0039039:6884-6903 Msa1457550:intron 50.0%
GAGGGAGACCTGAAGAGAAT+GGG - tig0039039:7729-7748 None:intergenic 50.0%
AGAGGGAGACCTGAAGAGAA+TGG - tig0039039:7730-7749 None:intergenic 50.0%
!! CTTTTGGAAGCAAGCACGGT+AGG - tig0039039:7767-7786 None:intergenic 50.0%
TCTCTCCACCTTCTCTCTCA+TGG - tig0039039:8064-8083 None:intergenic 50.0%
GAGAAGGTGGAGAGAAGTGA+AGG + tig0039039:8069-8088 Msa1457550:intron 50.0%
TTGGACTTGACTAAGGCCGT+TGG + tig0039039:8683-8702 Msa1457550:intron 50.0%
! AACAACTCAGTATCTGGGGC+TGG + tig0039039:9060-9079 Msa1457550:CDS 50.0%
GGACGCAGATAGAACATTCC+AGG - tig0039039:9114-9133 None:intergenic 50.0%
ATTCCACTGCTCGTGTTTCC+TGG + tig0039039:9177-9196 Msa1457550:intron 50.0%
TATCCAGGAAACACGAGCAG+TGG - tig0039039:9183-9202 None:intergenic 50.0%
AGCTCAATTGCTTGTGCTGG+AGG - tig0039039:9563-9582 None:intergenic 50.0%
TCGAGCTCAATTGCTTGTGC+TGG - tig0039039:9566-9585 None:intergenic 50.0%
AAACCTGTAAGCTACTCGCG+TGG - tig0039039:9621-9640 None:intergenic 50.0%
CACAAACCCAATTGGAGCGT+AGG + tig0039039:9968-9987 Msa1457550:intron 50.0%
CACAGACCCAATTGGAGTGT+TGG + tig0039039:10095-10114 Msa1457550:intron 50.0%
GTCCCATGTAGTAGGGAACA+AGG - tig0039039:10211-10230 None:intergenic 50.0%
AAATTAGTCACCGCAGCGCA+GGG - tig0039039:10305-10324 None:intergenic 50.0%
AAAATTAGTCACCGCAGCGC+AGG - tig0039039:10306-10325 None:intergenic 50.0%
GTTCTGTAACCCTTGGGGAA+AGG + tig0039039:10396-10415 Msa1457550:intron 50.0%
ACGACTTTCATGTACCTGGC+TGG - tig0039039:10601-10620 None:intergenic 50.0%
!! CGATCAACGGGGTTTTATGC+TGG + tig0039039:10647-10666 Msa1457550:intron 50.0%
TGACCCCACTTAGTGGGATA+AGG + tig0039039:10753-10772 Msa1457550:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - tig0039039:10761-10780 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + tig0039039:10758-10777 Msa1457550:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG + tig0039039:10765-10784 Msa1457550:intron 50.0%
! GGGATAAGGCTTGGTTGTTG+GGG + tig0039039:10767-10786 Msa1457550:intron 50.0%
ATGTCCGTTGCTCAGTGGTT+AGG - tig0039039:10954-10973 None:intergenic 50.0%
CAAACATGTCCGTTGCTCAG+TGG - tig0039039:10959-10978 None:intergenic 50.0%
CTGTTATCTGGCCAACCCAA+AGG + tig0039039:11121-11140 Msa1457550:CDS 50.0%
TTATCTGGCCAACCCAAAGG+AGG + tig0039039:11124-11143 Msa1457550:CDS 50.0%
CTGAAACTCCTCCTTTGGGT+TGG - tig0039039:11135-11154 None:intergenic 50.0%
GAGGAGTTTCAGTTGAAGCC+CGG + tig0039039:11143-11162 Msa1457550:CDS 50.0%
TGCTGTCAGTATGCTGATCC+TGG + tig0039039:11369-11388 Msa1457550:intron 50.0%
CCTTCGATAAGCCCTTCACT+TGG - tig0039039:11610-11629 None:intergenic 50.0%
CCAAGTGAAGGGCTTATCGA+AGG + tig0039039:11607-11626 Msa1457550:CDS 50.0%
TCACATAGGGTTAGGAGGAG+GGG - tig0039039:12069-12088 None:intergenic 50.0%
CTTCACATAGGGTTAGGAGG+AGG - tig0039039:12071-12090 None:intergenic 50.0%
TACGATAGACATACCTGCGC+CGG + tig0039039:12112-12131 Msa1457550:CDS 50.0%
TGGAAACGACATGGGAGTGG+AGG + tig0039039:172-191 Msa1457550:CDS 55.0%
GGAAACGACATGGGAGTGGA+GGG + tig0039039:173-192 Msa1457550:CDS 55.0%
! GGTCTCGGCTGGTTGCTTTA+TGG + tig0039039:549-568 Msa1457550:intron 55.0%
GCTACTCCCGATAATGCTGC+TGG + tig0039039:2170-2189 Msa1457550:CDS 55.0%
!! GAAGGCGTTGACATCATGGG+TGG + tig0039039:2790-2809 Msa1457550:intron 55.0%
CCTTGCAGACTACAGCACCA+CGG - tig0039039:3546-3565 None:intergenic 55.0%
GTGACTCTTGTCAAGCAGGC+TGG + tig0039039:3589-3608 Msa1457550:CDS 55.0%
TTCCCCCGAATCAGTGACCA+TGG + tig0039039:3895-3914 Msa1457550:CDS 55.0%
GTGGGACTTGAGTATGGCCA+TGG - tig0039039:4534-4553 None:intergenic 55.0%
TGGCCATACTCAAGTCCCAC+GGG + tig0039039:4534-4553 Msa1457550:CDS 55.0%
ACTTTGTTCCTCGGGACTCG+AGG + tig0039039:4621-4640 Msa1457550:CDS 55.0%
GTGACAGCACTCTTTGGGCT+TGG - tig0039039:5284-5303 None:intergenic 55.0%
GGTGCGTGACAGCACTCTTT+GGG - tig0039039:5289-5308 None:intergenic 55.0%
TGGTGCGTGACAGCACTCTT+TGG - tig0039039:5290-5309 None:intergenic 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG + tig0039039:5279-5298 Msa1457550:intron 55.0%
GTGACAGCACTCTTTGGGCT+TGG - tig0039039:5284-5303 None:intergenic 55.0%
GGTGCGTGACAGCACTCTTT+GGG - tig0039039:5289-5308 None:intergenic 55.0%
TGGTGCGTGACAGCACTCTT+TGG - tig0039039:5290-5309 None:intergenic 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG + tig0039039:5279-5298 Msa1457550:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG + tig0039039:5279-5298 Msa1457550:intron 55.0%
TCAGTCTCGCCTCCTCTTTC+TGG + tig0039039:6295-6314 Msa1457550:CDS 55.0%
GCTGGAGACAGCAGTATCAC+TGG + tig0039039:6340-6359 Msa1457550:CDS 55.0%
GAAACGACCACCGGAACTGA+TGG + tig0039039:6388-6407 Msa1457550:CDS 55.0%
AAAGGAGCCATCAGTTCCGG+TGG - tig0039039:6398-6417 None:intergenic 55.0%
CGGAACTGATGGCTCCTTTG+TGG + tig0039039:6399-6418 Msa1457550:CDS 55.0%
ACTGATGGCTCCTTTGTGGC+AGG + tig0039039:6403-6422 Msa1457550:CDS 55.0%
AGTTCGGATCCGTTGACACC+AGG + tig0039039:6725-6744 Msa1457550:intron 55.0%
! CCGTTGACACCTGGTGTCAA+CGG - tig0039039:6737-6756 None:intergenic 55.0%
CCGTTGACACCAGGTGTCAA+CGG + tig0039039:6734-6753 Msa1457550:intron 55.0%
CTCATCTTCCTCCCAAGGTC+AGG + tig0039039:6889-6908 Msa1457550:intron 55.0%
TCGTTGACACCAGGCGTCAA+CGG + tig0039039:7439-7458 Msa1457550:intron 55.0%
ATGGGAGCAGCGGTAGATAC+AGG - tig0039039:7711-7730 None:intergenic 55.0%
CCTGAAGAGAATGGGAGCAG+CGG - tig0039039:7721-7740 None:intergenic 55.0%
CAACGCACTCCGTCGTGTAT+GGG - tig0039039:8580-8599 None:intergenic 55.0%
! AACTCAGTATCTGGGGCTGG+AGG + tig0039039:9063-9082 Msa1457550:CDS 55.0%
! ACTCAGTATCTGGGGCTGGA+GGG + tig0039039:9064-9083 Msa1457550:CDS 55.0%
CTAATTGAGACCCTGCGCTG+CGG + tig0039039:10292-10311 Msa1457550:intron 55.0%
! TGCTGATGATAGGGTGACGG+AGG + tig0039039:10888-10907 Msa1457550:intron 55.0%
GAAGCCCGGTCAGTGTCAAA+AGG + tig0039039:11157-11176 Msa1457550:CDS 55.0%
TGAAGGGCTTATCGAAGGGC+AGG + tig0039039:11612-11631 Msa1457550:CDS 55.0%
GTATCTCAGTGGGCCCACAT+GGG - tig0039039:11729-11748 None:intergenic 55.0%
TGTATCTCAGTGGGCCCACA+TGG - tig0039039:11730-11749 None:intergenic 55.0%
ATGTGGGCCCACTGAGATAC+AGG + tig0039039:11729-11748 Msa1457550:CDS 55.0%
CACATAGGGTTAGGAGGAGG+GGG - tig0039039:12068-12087 None:intergenic 55.0%
ACGATAGACATACCTGCGCC+GGG + tig0039039:12113-12132 Msa1457550:CDS 55.0%
GTCGGGGGTCGTGTAGTTGA+TGG + tig0039039:152-171 Msa1457550:CDS 60.0%
! TTGGGTCACTTGCTGCGCTG+TGG + tig0039039:766-785 Msa1457550:intron 60.0%
! TGGGTCACTTGCTGCGCTGT+GGG + tig0039039:767-786 Msa1457550:intron 60.0%
TGGGATCCCCCATTTGGACC+AGG + tig0039039:3425-3444 Msa1457550:intron 60.0%
!! CCGTGGTGCTGTAGTCTGCA+AGG + tig0039039:3543-3562 Msa1457550:CDS 60.0%
GTTGGAGCCGAGGACTTCGA+AGG + tig0039039:3959-3978 Msa1457550:CDS 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG + tig0039039:5278-5297 Msa1457550:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG - tig0039039:5315-5334 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG + tig0039039:5313-5332 Msa1457550:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG + tig0039039:5314-5333 Msa1457550:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG + tig0039039:5315-5334 Msa1457550:intron 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG + tig0039039:5278-5297 Msa1457550:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG - tig0039039:5315-5334 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG + tig0039039:5313-5332 Msa1457550:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG + tig0039039:5314-5333 Msa1457550:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG + tig0039039:5315-5334 Msa1457550:intron 60.0%
! TGGGCGTGAGGGGGTGTATT+GGG + tig0039039:5443-5462 Msa1457550:intron 60.0%
GTGACAGCGCTCTTTGGGCT+TGG - tig0039039:5532-5551 None:intergenic 60.0%
GGTGCGTGACAGCGCTCTTT+GGG - tig0039039:5537-5556 None:intergenic 60.0%
TGGTGCGTGACAGCGCTCTT+TGG - tig0039039:5538-5557 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG + tig0039039:5278-5297 Msa1457550:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG - tig0039039:5315-5334 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG + tig0039039:5313-5332 Msa1457550:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG + tig0039039:5314-5333 Msa1457550:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG + tig0039039:5315-5334 Msa1457550:intron 60.0%
CATCAGTGCAACGCGCACAC+AGG + tig0039039:6590-6609 Msa1457550:intron 60.0%
CCGCTGCTCCCATTCTCTTC+AGG + tig0039039:7718-7737 Msa1457550:intron 60.0%
CACTCCGTCGTGTATGGGCT+TGG - tig0039039:8575-8594 None:intergenic 60.0%
CCAACGCACTCCGTCGTGTA+TGG - tig0039039:8581-8600 None:intergenic 60.0%
CCATACACGACGGAGTGCGT+TGG + tig0039039:8578-8597 Msa1457550:intron 60.0%
TGTAAGCTACTCGCGTGGCC+TGG - tig0039039:9616-9635 None:intergenic 60.0%
AGGCCACGCGAGTAGCTTAC+AGG + tig0039039:9615-9634 Msa1457550:CDS 60.0%
GTACAGGCAAGGGAGGTCAC+AGG - tig0039039:11034-11053 None:intergenic 60.0%
! GGGTCACTTGCTGCGCTGTG+GGG + tig0039039:768-787 Msa1457550:intron 65.0%
CGCCCAGCACTCTTTGGGCT+TGG - tig0039039:5310-5329 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG + tig0039039:5312-5331 Msa1457550:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG - tig0039039:5316-5335 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG + tig0039039:5316-5335 Msa1457550:intron 65.0%
CGCCCAGCACTCTTTGGGCT+TGG - tig0039039:5310-5329 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG + tig0039039:5312-5331 Msa1457550:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG - tig0039039:5316-5335 None:intergenic 65.0%
! CTGGGCGTGAGGGGGTGTAT+TGG + tig0039039:5442-5461 Msa1457550:intron 65.0%
CGCCCAGCACTCTTTGGGCT+TGG - tig0039039:5310-5329 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG + tig0039039:5312-5331 Msa1457550:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG - tig0039039:5316-5335 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG + tig0039039:5316-5335 Msa1457550:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG + tig0039039:5324-5343 Msa1457550:intron 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG + tig0039039:5325-5344 Msa1457550:intron 65.0%
GTTGATGTGGTTCCCGGCGC+AGG - tig0039039:12128-12147 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0039039 gene 128 12513 128 ID=Msa1457550;Name=Msa1457550
tig0039039 mRNA 128 12513 128 ID=Msa1457550-mRNA-1;Parent=Msa1457550;Name=Msa1457550-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.94|1|1|1|17|317|875
tig0039039 exon 128 265 128 ID=Msa1457550-mRNA-1:exon:21234;Parent=Msa1457550-mRNA-1
tig0039039 exon 976 1047 976 ID=Msa1457550-mRNA-1:exon:21235;Parent=Msa1457550-mRNA-1
tig0039039 exon 1203 1298 1203 ID=Msa1457550-mRNA-1:exon:21236;Parent=Msa1457550-mRNA-1
tig0039039 exon 1380 1457 1380 ID=Msa1457550-mRNA-1:exon:21237;Parent=Msa1457550-mRNA-1
tig0039039 exon 2134 2262 2134 ID=Msa1457550-mRNA-1:exon:21238;Parent=Msa1457550-mRNA-1
tig0039039 exon 3529 3705 3529 ID=Msa1457550-mRNA-1:exon:21239;Parent=Msa1457550-mRNA-1
tig0039039 exon 3884 4087 3884 ID=Msa1457550-mRNA-1:exon:21240;Parent=Msa1457550-mRNA-1
tig0039039 exon 4180 4293 4180 ID=Msa1457550-mRNA-1:exon:21241;Parent=Msa1457550-mRNA-1
tig0039039 exon 4401 4642 4401 ID=Msa1457550-mRNA-1:exon:21242;Parent=Msa1457550-mRNA-1
tig0039039 exon 6079 6124 6079 ID=Msa1457550-mRNA-1:exon:21243;Parent=Msa1457550-mRNA-1
tig0039039 exon 6220 6468 6220 ID=Msa1457550-mRNA-1:exon:21244;Parent=Msa1457550-mRNA-1
tig0039039 exon 8916 9143 8916 ID=Msa1457550-mRNA-1:exon:21245;Parent=Msa1457550-mRNA-1
tig0039039 exon 9545 9636 9545 ID=Msa1457550-mRNA-1:exon:21246;Parent=Msa1457550-mRNA-1
tig0039039 exon 11102 11330 11102 ID=Msa1457550-mRNA-1:exon:21247;Parent=Msa1457550-mRNA-1
tig0039039 exon 11419 11772 11419 ID=Msa1457550-mRNA-1:exon:21248;Parent=Msa1457550-mRNA-1
tig0039039 exon 11914 11987 11914 ID=Msa1457550-mRNA-1:exon:21249;Parent=Msa1457550-mRNA-1
tig0039039 exon 12091 12513 12091 ID=Msa1457550-mRNA-1:exon:21250;Parent=Msa1457550-mRNA-1
tig0039039 CDS 128 265 128 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 976 1047 976 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 1203 1298 1203 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 1380 1457 1380 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 2134 2262 2134 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 3529 3705 3529 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 3884 4087 3884 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 4180 4293 4180 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 4401 4642 4401 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 6079 6124 6079 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 6220 6468 6220 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 8916 9143 8916 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 9545 9636 9545 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 11102 11330 11102 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 11419 11772 11419 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 11914 11987 11914 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 CDS 12091 12196 12091 ID=Msa1457550-mRNA-1:cds;Parent=Msa1457550-mRNA-1
tig0039039 three_prime_UTR 12197 12513 12197 ID=Msa1457550-mRNA-1:three_prime_utr;Parent=Msa1457550-mRNA-1
Gene Sequence

>Msa1457550

CTGTTACAGGTAACTGGATTTTCTGTCGGGGGTCGTGTAGTTGATGGAAACGACATGGGAGTGGAGGGTGTCAAGATCATAGTTGATGGTCATGAAAGGTCTATTACTGACAATCAAGGTTATTACAAGCTTGATCAGGTTACGTCCACACACTATACCATAGAAGCAAGGAAGAAGCATTACAAGTTCAAGAAATTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATTGTCGCCGTTTCATATGATCTTTGTGGTTTAGTTAGGATGGTTAGTAGCGGTCAGAAAGCAACGGTGGCTTTGACTCATGGACCTGATAATGTAAAACCACAAAAGAAACAAACAGATGGAAATGGGAATTTCTGCTTTGAGGTTCTTCCTGGTGAATATCGCTTGTCAGCTATTGCTGCTACTCCCGATAATGCTGCTGGACTCATGTTTGCTCCATCTTATATTGATGTTGCGATCAAAAGTCCATTGTTGAATGTTGAATTTTCACAGGCTTTGGTCAATGTCCGTGGTGCTGTAGTCTGCAAGGAGAAATGCGATCCATCTGTATCTGTGACTCTTGTCAAGCAGGCTGGTAAACATAATGAAGAGAGAAAGACAATTAGCTTGACCTCCGAGCGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTGAAACATAGTTCCCCCGAATCAGTGACCATGGAAGATAATTGGTGCTGGGAGAAGAGCTTCATAGATGTAAATGTTGGAGCCGAGGACTTCGAAGGAATTGTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCATGATGTTGATGGTTACATAAATCAACCAGATGGGTCAACTGTGAATTTGAAGATTCGGAAAGGTTCCCAACATATATGTGTTGAATTTCCCGGAATACATGAATTTAGTTTTATTGACTCATGTGTCTTCTTTGGGAGTTCATCTGTGAAAATTGACACATCGAATCTATTGCCCATCCATCTAAAAGGAGAAAAGCATCTTATTAAAGGACAAATAAATGTCCTTTCCGGCTTACATGATGCATTGCCTGAGAAAATAGTTGTTGATATTTATCATGAAGGAGCTGGCGTTGGTGATAATGCCATGGCCATACTCAAGTCCCACGGGAAAGATGAAACAAATACTTCTGTCTTTGAGTATTCTGTTTGGGCCAATCCAGGAGAAAAGCTTAACTTTGTTCCTCGGGACTCGAGGAATGATGGAGATAAAAAGCTTTTATTTTATCCCAGAGAACATCATGTATCAGTGACAGATGATAATTGTCAAGCTCATATTCCTACATTTTCTTGTCGGTTGGGTGTATATATTGAAGGATCAGTCTCGCCTCCTCTTTCTGGTGTTCATATCAGGATTTTTGCTGCTGGAGACAGCAGTATCACTGGACTTAAAAGTGGTGAACTAATACTTGAAACGACCACCGGAACTGATGGCTCCTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTATAATGTTCAGGCTTCAAAGCCTGGTTATCATTTAAAACAAGTTGGGCCTCATTCCTTTAGTTGTCAGAAGCTTGGTCAGATTTCAATACATATACATCACAATGACAATAAAGAGCTCATTCCTTCAGTTCTGTTATCTTTGAGTGGTGATAATGGTTATAGAAACAACTCAGTATCTGGGGCTGGAGGGACATTCGTATTTGATAGTTTGTTTCCTGGAATGTTCTATCTGCGTCCTGTTTTGAAGGAATATGCTTTCTCACCTCCAGCACAAGCAATTGAGCTCGAATCAGGGGAGTTCAAAGAAGTTATTTTCCAGGCCACGCGAGTAGCTTACAGTGCTATTGGCTTAGTCACTCTGTTATCTGGCCAACCCAAAGGAGGAGTTTCAGTTGAAGCCCGGTCAGTGTCAAAAGGCTATTTTGAGGAAACCGTAACAGATTCGTCTGGGAATTATCGTCTGAGAGGACTACTGCCTGATACTGTCTATGCTATCAAAGTCGCTAAAAGGGATGTTATGGAAAGTTCTAATATAGAGCGTGCATCTCCAGATTCTCTTTCTGTTAAGGTTGGAACTGAGGATATCAAGGGTTTGGATTTTATAGTTTTTGAGGAGCCAGATATGACAATTGTAAGTTGTCATGTTGAAGGAAACGGTACGGATGAGCTTCGTAAACATCTGATGGTAGAAATCAGGTCTGCTAGTGAGACAAGCAAGATAGAGTCAGTCTTCCCCCTGCCAATTTCGAACTTCTTCCAAGTGAAGGGCTTATCGAAGGGCAGGCACCTTCTACAACTTCGATCTGGTCTCCCATCAAGCTCACTTAGATTTGAATCTGATATCATTGAGGTCGACTTGGACAAAAATGTTCAAACCCATGTGGGCCCACTGAGATACAGGATTGATGATCAGCTGAAGCAGGAGTTGACTCCAGCACCAGTATTTCCTCTTATAATTGCATTTCTAGTTGTTGCACTATTTATCAGCATCCCCAGATTGAACGATTTGTATCAAGCTACGATAGACATACCTGCGCCGGGAACCACATCAACTTCAAGAAAAGATGCGAGGAAGCCAACGTTGCGAAAGAAAACTTACTAA
Protein sequence

>Msa1457550

LLQVTGFSVGGRVVDGNDMGVEGVKIIVDGHERSITDNQGYYKLDQVTSTHYTIEARKKHYKFKKLENYMVLPNMASIEDIVAVSYDLCGLVRMVSSGQKATVALTHGPDNVKPQKKQTDGNGNFCFEVLPGEYRLSAIAATPDNAAGLMFAPSYIDVAIKSPLLNVEFSQALVNVRGAVVCKEKCDPSVSVTLVKQAGKHNEERKTISLTSERSEFLFSDVIPGKYRLEVKHSSPESVTMEDNWCWEKSFIDVNVGAEDFEGIVFVQKGYWVNVISTHDVDGYINQPDGSTVNLKIRKGSQHICVEFPGIHEFSFIDSCVFFGSSSVKIDTSNLLPIHLKGEKHLIKGQINVLSGLHDALPEKIVVDIYHEGAGVGDNAMAILKSHGKDETNTSVFEYSVWANPGEKLNFVPRDSRNDGDKKLLFYPREHHVSVTDDNCQAHIPTFSCRLGVYIEGSVSPPLSGVHIRIFAAGDSSITGLKSGELILETTTGTDGSFVAGPLYDDVGYNVQASKPGYHLKQVGPHSFSCQKLGQISIHIHHNDNKELIPSVLLSLSGDNGYRNNSVSGAGGTFVFDSLFPGMFYLRPVLKEYAFSPPAQAIELESGEFKEVIFQATRVAYSAIGLVTLLSGQPKGGVSVEARSVSKGYFEETVTDSSGNYRLRGLLPDTVYAIKVAKRDVMESSNIERASPDSLSVKVGTEDIKGLDFIVFEEPDMTIVSCHVEGNGTDELRKHLMVEIRSASETSKIESVFPLPISNFFQVKGLSKGRHLLQLRSGLPSSSLRFESDIIEVDLDKNVQTHVGPLRYRIDDQLKQELTPAPVFPLIIAFLVVALFISIPRLNDLYQATIDIPAPGTTSTSRKDARKPTLRKKTY*