Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465910 | AFK48766.1 | 100.000 | 268 | 0 | 0 | 1 | 268 | 156 | 423 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465910 | sp|P42824|DNJH2_ALLPO | 68.030 | 269 | 81 | 3 | 1 | 268 | 154 | 418 | 3.77e-128 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465910 | I3T8C4 | 100.000 | 268 | 0 | 0 | 1 | 268 | 156 | 423 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1184230 | Msa1465910 | 0.828521 | 8.583903e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465910 | MtrunA17_Chr8g0334811 | 100.000 | 268 | 0 | 0 | 1 | 268 | 156 | 423 | 0.0 | 555 |
| Msa1465910 | MtrunA17_Chr2g0322181 | 66.045 | 268 | 87 | 2 | 1 | 268 | 154 | 417 | 5.05e-126 | 364 |
| Msa1465910 | MtrunA17_Chr4g0025401 | 67.286 | 269 | 83 | 3 | 1 | 268 | 152 | 416 | 2.83e-125 | 362 |
| Msa1465910 | MtrunA17_Chr5g0415751 | 36.735 | 147 | 89 | 2 | 61 | 207 | 18 | 160 | 2.00e-29 | 109 |
| Msa1465910 | MtrunA17_Chr2g0324921 | 40.000 | 140 | 80 | 2 | 68 | 207 | 199 | 334 | 5.09e-24 | 99.0 |
| Msa1465910 | MtrunA17_Chr7g0269841 | 34.225 | 187 | 103 | 5 | 21 | 207 | 177 | 343 | 5.28e-23 | 96.3 |
| Msa1465910 | MtrunA17_Chr2g0282741 | 38.571 | 140 | 82 | 2 | 68 | 207 | 203 | 338 | 1.06e-22 | 95.5 |
| Msa1465910 | MtrunA17_Chr4g0006391 | 35.374 | 147 | 91 | 2 | 61 | 207 | 196 | 338 | 1.16e-22 | 95.5 |
| Msa1465910 | MtrunA17_Chr4g0040501 | 38.211 | 123 | 74 | 1 | 68 | 190 | 208 | 328 | 1.66e-22 | 95.1 |
| Msa1465910 | MtrunA17_Chr3g0124801 | 36.076 | 158 | 94 | 4 | 34 | 190 | 125 | 276 | 6.85e-22 | 92.4 |
| Msa1465910 | MtrunA17_Chr3g0093111 | 34.965 | 143 | 89 | 2 | 65 | 207 | 172 | 310 | 4.40e-21 | 90.5 |
| Msa1465910 | MtrunA17_Chr4g0010781 | 30.387 | 181 | 115 | 6 | 11 | 190 | 240 | 410 | 2.90e-20 | 89.7 |
| Msa1465910 | MtrunA17_Chr2g0277721 | 35.948 | 153 | 95 | 2 | 62 | 214 | 117 | 266 | 2.08e-19 | 85.1 |
| Msa1465910 | MtrunA17_Chr3g0138471 | 32.639 | 144 | 93 | 2 | 64 | 207 | 186 | 325 | 1.76e-18 | 83.6 |
| Msa1465910 | MtrunA17_Chr2g0282761 | 34.211 | 152 | 94 | 4 | 42 | 190 | 182 | 330 | 2.02e-18 | 83.6 |
| Msa1465910 | MtrunA17_Chr5g0426951 | 29.474 | 190 | 119 | 6 | 4 | 192 | 235 | 410 | 3.69e-17 | 80.9 |
| Msa1465910 | MtrunA17_Chr3g0087741 | 29.670 | 182 | 114 | 8 | 11 | 190 | 241 | 410 | 3.84e-16 | 77.8 |
| Msa1465910 | MtrunA17_Chr3g0123861 | 26.702 | 191 | 131 | 5 | 2 | 190 | 228 | 411 | 6.01e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465910 | AT5G22060.1 | 66.791 | 268 | 86 | 2 | 1 | 268 | 155 | 419 | 1.20e-127 | 369 |
| Msa1465910 | AT3G44110.1 | 68.773 | 269 | 81 | 2 | 1 | 268 | 154 | 420 | 1.27e-126 | 366 |
| Msa1465910 | AT3G44110.2 | 73.034 | 178 | 48 | 0 | 1 | 178 | 154 | 331 | 1.84e-93 | 279 |
| Msa1465910 | AT2G20550.1 | 38.776 | 147 | 86 | 2 | 61 | 207 | 141 | 283 | 7.65e-26 | 103 |
| Msa1465910 | AT2G20550.2 | 38.776 | 147 | 86 | 2 | 61 | 207 | 141 | 283 | 7.65e-26 | 103 |
| Msa1465910 | AT3G47940.1 | 35.374 | 147 | 91 | 2 | 61 | 207 | 204 | 346 | 1.02e-24 | 101 |
| Msa1465910 | AT3G62600.1 | 35.260 | 173 | 92 | 5 | 21 | 192 | 179 | 332 | 1.43e-23 | 98.2 |
| Msa1465910 | AT2G20560.1 | 36.054 | 147 | 90 | 2 | 61 | 207 | 194 | 336 | 1.90e-23 | 97.8 |
| Msa1465910 | AT4G28480.1 | 37.692 | 130 | 79 | 1 | 61 | 190 | 205 | 332 | 6.32e-22 | 94.0 |
| Msa1465910 | AT5G01390.2 | 37.500 | 128 | 78 | 1 | 63 | 190 | 135 | 260 | 8.54e-22 | 92.4 |
| Msa1465910 | AT5G01390.1 | 37.500 | 128 | 78 | 1 | 63 | 190 | 193 | 318 | 1.14e-21 | 92.8 |
| Msa1465910 | AT1G10350.1 | 34.694 | 147 | 89 | 4 | 61 | 207 | 207 | 346 | 1.48e-21 | 92.8 |
| Msa1465910 | AT4G28480.2 | 38.211 | 123 | 74 | 1 | 68 | 190 | 154 | 274 | 1.82e-21 | 91.7 |
| Msa1465910 | AT3G08910.1 | 36.719 | 128 | 79 | 1 | 63 | 190 | 180 | 305 | 1.24e-20 | 89.7 |
| Msa1465910 | AT1G11040.1 | 38.462 | 130 | 78 | 1 | 62 | 191 | 291 | 418 | 1.83e-20 | 90.5 |
| Msa1465910 | AT1G59725.1 | 32.857 | 140 | 90 | 2 | 68 | 207 | 193 | 328 | 3.37e-20 | 88.6 |
| Msa1465910 | AT5G25530.2 | 35.862 | 145 | 89 | 2 | 63 | 207 | 197 | 337 | 4.19e-20 | 88.6 |
| Msa1465910 | AT5G25530.1 | 35.862 | 145 | 89 | 2 | 63 | 207 | 205 | 345 | 4.98e-20 | 88.6 |
| Msa1465910 | AT5G48030.1 | 32.065 | 184 | 109 | 9 | 10 | 190 | 254 | 424 | 7.13e-18 | 83.2 |
| Msa1465910 | AT1G44160.1 | 34.307 | 137 | 86 | 2 | 71 | 207 | 221 | 353 | 1.67e-17 | 81.6 |
| Msa1465910 | AT1G28210.1 | 26.754 | 228 | 147 | 7 | 11 | 229 | 186 | 402 | 8.40e-16 | 77.0 |
| Msa1465910 | AT1G28210.2 | 25.217 | 230 | 151 | 6 | 11 | 231 | 186 | 403 | 1.20e-15 | 76.6 |
| Msa1465910 | AT1G28210.3 | 26.977 | 215 | 141 | 6 | 11 | 216 | 186 | 393 | 1.37e-15 | 76.3 |
| Msa1465910 | AT1G80030.4 | 28.151 | 238 | 160 | 8 | 2 | 236 | 229 | 458 | 1.54e-15 | 76.3 |
| Msa1465910 | AT1G80030.2 | 28.696 | 230 | 153 | 8 | 2 | 228 | 229 | 450 | 1.62e-15 | 76.3 |
| Msa1465910 | AT1G80030.3 | 28.696 | 230 | 153 | 8 | 2 | 228 | 229 | 450 | 1.62e-15 | 76.3 |
| Msa1465910 | AT1G80030.1 | 28.696 | 230 | 153 | 8 | 2 | 228 | 229 | 450 | 1.62e-15 | 76.3 |
Find 81 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTATGCTATTTGGTTCT+TGG | 0.180147 | tig0045716:+1498 | Msa1465910:three_prime_UTR |
| CACAATCATCTACCTCCTTT+TGG | 0.237074 | tig0045716:-1103 | Msa1465910:intergenic |
| ATTAAATGCTTCTTGGTATA+AGG | 0.237682 | tig0045716:+1441 | Msa1465910:three_prime_UTR |
| ACTGCATCTTAGTTTATCTT+AGG | 0.249192 | tig0045716:+1337 | Msa1465910:three_prime_UTR |
| CTAATTCCAGGCTTTGGCTT+GGG | 0.259172 | tig0045716:-1043 | Msa1465910:intergenic |
| TGCATGCTACCTATGCTATT+TGG | 0.269237 | tig0045716:+1491 | Msa1465910:three_prime_UTR |
| TATGAAAATTAAATGCTTCT+TGG | 0.270465 | tig0045716:+1434 | Msa1465910:three_prime_UTR |
| TAGTGTTGATTTCCCGGATT+CGG | 0.302065 | tig0045716:+1010 | Msa1465910:CDS |
| GCCCAGTCCAATTTGCCTTC+TGG | 0.320244 | tig0045716:-201 | Msa1465910:intergenic |
| CAAGTTTAGTGTTGATTTCC+CGG | 0.325586 | tig0045716:+1004 | Msa1465910:CDS |
| GGAACTGCTGGAAGGTGTTT+TGG | 0.325803 | tig0045716:+152 | Msa1465910:CDS |
| AGTGTTGATTTCCCGGATTC+GGG | 0.336340 | tig0045716:+1011 | Msa1465910:CDS |
| TTTAATGTCACACATCTTGA+TGG | 0.337670 | tig0045716:+779 | Msa1465910:CDS |
| ATGTCTCCTGTGATTGTATC+AGG | 0.345512 | tig0045716:-650 | Msa1465910:intergenic |
| AAGATTACCAGAAGGCAAAT+TGG | 0.345945 | tig0045716:+194 | Msa1465910:CDS |
| TCTTGTTTCCCTTGCATTGA+GGG | 0.365622 | tig0045716:-378 | Msa1465910:intergenic |
| CAAGATGTGTGACATTAAAC+TGG | 0.381451 | tig0045716:-775 | Msa1465910:intergenic |
| CAACACTAAACTTGATGTAT+AGG | 0.388764 | tig0045716:-995 | Msa1465910:intergenic |
| GCTGGAGGTGCATGTGGAAA+AGG | 0.404757 | tig0045716:+420 | Msa1465910:CDS |
| TAAAGGGACATCCGAAGTTT+CGG | 0.405532 | tig0045716:+690 | Msa1465910:CDS |
| TCTTGATGGAAGGCAACTAT+TGG | 0.409046 | tig0045716:+793 | Msa1465910:CDS |
| GGGGAAAGAAAACCCGAATC+CGG | 0.416779 | tig0045716:-1023 | Msa1465910:intergenic |
| TCTAATTCCAGGCTTTGGCT+TGG | 0.421594 | tig0045716:-1044 | Msa1465910:intergenic |
| CCTGGCTTGATGACTTCGCC+GGG | 0.442136 | tig0045716:-827 | Msa1465910:intergenic |
| TTACCTGTTCCTTTGCAGTC+AGG | 0.447775 | tig0045716:-251 | Msa1465910:intergenic |
| CTGGAGGTGCATGTGGAAAA+GGG | 0.453294 | tig0045716:+421 | Msa1465910:CDS |
| TCTTTCCCCAAGCCAAAGCC+TGG | 0.454319 | tig0045716:+1037 | Msa1465910:CDS |
| TGTCCTGACTGCAAAGGAAC+AGG | 0.455803 | tig0045716:+248 | Msa1465910:CDS |
| TGATGAGCACTCGCAGCCTC+GGG | 0.470279 | tig0045716:+1220 | Msa1465910:CDS |
| ACCTGGCTTGATGACTTCGC+CGG | 0.476909 | tig0045716:-828 | Msa1465910:intergenic |
| TCACGCTCCCTCCGAAACTT+CGG | 0.481300 | tig0045716:-701 | Msa1465910:intergenic |
| TGTGGAAAAGGGGATGCAGC+AGG | 0.481538 | tig0045716:+432 | Msa1465910:CDS |
| TACCAGAAGGCAAATTGGAC+TGG | 0.486122 | tig0045716:+199 | Msa1465910:CDS |
| ATGATGAGCACTCGCAGCCT+CGG | 0.488061 | tig0045716:+1219 | Msa1465910:CDS |
| CAAGATTACTCAAGAAAAGA+AGG | 0.490692 | tig0045716:+396 | Msa1465910:CDS |
| TAATTCCAGGCTTTGGCTTG+GGG | 0.490752 | tig0045716:-1042 | Msa1465910:intergenic |
| TACTCAAGAAAAGAAGGTGC+TGG | 0.494841 | tig0045716:+402 | Msa1465910:CDS |
| ATCTTGTTTCCCTTGCATTG+AGG | 0.517889 | tig0045716:-379 | Msa1465910:intergenic |
| AAGCAAGAACTTGTCCCAAA+AGG | 0.522525 | tig0045716:+1088 | Msa1465910:CDS |
| GGGAAAGAAAACCCGAATCC+GGG | 0.528601 | tig0045716:-1022 | Msa1465910:intergenic |
| ACCAGAAGGCAAATTGGACT+GGG | 0.532637 | tig0045716:+200 | Msa1465910:CDS |
| CTGCAATATTGACATCATGC+AGG | 0.534492 | tig0045716:-1136 | Msa1465910:intergenic |
| TAATCTTCATACCTGTGCCC+TGG | 0.551402 | tig0045716:-178 | Msa1465910:intergenic |
| AACTGTAAATAAAGTAACAT+TGG | 0.551520 | tig0045716:-1369 | Msa1465910:intergenic |
| ACATGGTAGGCCGTTCATGA+AGG | 0.560612 | tig0045716:+968 | Msa1465910:CDS |
| AGATAGATGCCCTCAATGCA+AGG | 0.563401 | tig0045716:+369 | Msa1465910:CDS |
| CCCGGCGAAGTCATCAAGCC+AGG | 0.565992 | tig0045716:+827 | Msa1465910:CDS |
| ATGTCACACATCTTGATGGA+AGG | 0.569738 | tig0045716:+783 | Msa1465910:CDS |
| TGTTGAGCGCATTGCACCCG+AGG | 0.575241 | tig0045716:-1236 | Msa1465910:intergenic |
| CATAAAGCTATAAATGATGA+GGG | 0.576223 | tig0045716:+936 | Msa1465910:CDS |
| ACATAAAGCTATAAATGATG+AGG | 0.577306 | tig0045716:+935 | Msa1465910:CDS |
| ATGCAGCCTGATACAATCAC+AGG | 0.585333 | tig0045716:+644 | Msa1465910:intron |
| TGCAATATTGACATCATGCA+GGG | 0.587471 | tig0045716:-1135 | Msa1465910:intergenic |
| CATGGTAGGCCGTTCATGAA+GGG | 0.587866 | tig0045716:+969 | Msa1465910:CDS |
| AGGGACATCCGAAGTTTCGG+AGG | 0.597194 | tig0045716:+693 | Msa1465910:CDS |
| AGCTTAACTGAGGCTCTCTG+TGG | 0.604504 | tig0045716:+749 | Msa1465910:CDS |
| CAAGAACTTGTCCCAAAAGG+AGG | 0.607210 | tig0045716:+1091 | Msa1465910:CDS |
| CATCGTCATCATATGCCTCA+CGG | 0.611904 | tig0045716:-1187 | Msa1465910:intergenic |
| AGGGAATGCCACAACATGGT+AGG | 0.614548 | tig0045716:+955 | Msa1465910:CDS |
| GAAGGTGCTGGAGGTGCATG+TGG | 0.616316 | tig0045716:+414 | Msa1465910:CDS |
| TATAGGCGTCCCTTCATGAA+CGG | 0.626051 | tig0045716:-978 | Msa1465910:intergenic |
| AGCTCAAATTGTGTTCAATG+TGG | 0.627745 | tig0045716:-730 | Msa1465910:intergenic |
| TGGAGGTGCATGTGGAAAAG+GGG | 0.628141 | tig0045716:+422 | Msa1465910:CDS |
| AGCCAAGAACCAAATAGCAT+AGG | 0.629539 | tig0045716:-1500 | Msa1465910:intergenic |
| AAAGGAGGTAGATGATTGTG+AGG | 0.630174 | tig0045716:+1106 | Msa1465910:CDS |
| TCAAATTGTGTTCAATGTGG+AGG | 0.630241 | tig0045716:-727 | Msa1465910:intergenic |
| CACGTCTGTCCTGACTGCAA+AGG | 0.637296 | tig0045716:+242 | Msa1465910:CDS |
| ATGAACGGCCTACCATGTTG+TGG | 0.637316 | tig0045716:-963 | Msa1465910:intergenic |
| GTGGAAAAGGGGATGCAGCA+GGG | 0.640568 | tig0045716:+433 | Msa1465910:CDS |
| GGGACATCCGAAGTTTCGGA+GGG | 0.643722 | tig0045716:+694 | Msa1465910:CDS |
| TCAAGAAAAGAAGGTGCTGG+AGG | 0.645278 | tig0045716:+405 | Msa1465910:CDS |
| GATAGATGCCCTCAATGCAA+GGG | 0.651483 | tig0045716:+370 | Msa1465910:CDS |
| GGTCACAAGATTGTATTCGA+AGG | 0.655024 | tig0045716:+454 | Msa1465910:CDS |
| ACACAATTTGAGCTTAACTG+AGG | 0.658183 | tig0045716:+739 | Msa1465910:CDS |
| CAGGTATGAAGATTACCAGA+AGG | 0.662617 | tig0045716:+186 | Msa1465910:CDS |
| GATGAGGGAATGCCACAACA+TGG | 0.666187 | tig0045716:+951 | Msa1465910:CDS |
| GCATGATGTCAATATTGCAG+AGG | 0.670479 | tig0045716:+1139 | Msa1465910:CDS |
| CTATTGGTCAAATCGAACCC+CGG | 0.690957 | tig0045716:+809 | Msa1465910:CDS |
| CTGGCTTGATGACTTCGCCG+GGG | 0.695154 | tig0045716:-826 | Msa1465910:intergenic |
| AATATTGACATCATGCAGGG+TGG | 0.727859 | tig0045716:-1132 | Msa1465910:intergenic |
| AAAGAAGCAACAATACCGTG+AGG | 0.744682 | tig0045716:+1172 | Msa1465910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTAATACTTAGTAAAGA+TGG | + | tig0045716:558-577 | Msa1465910:intron | 20.0% |
| !! | AACTGTAAATAAAGTAACAT+TGG | - | tig0045716:1372-1391 | Msa1465910:intergenic | 20.0% |
| !! | TATGAAAATTAAATGCTTCT+TGG | + | tig0045716:1434-1453 | Msa1465910:three_prime_UTR | 20.0% |
| !! | ATGTTAATACTTAGTAAAGA+TGG | + | tig0045716:558-577 | Msa1465910:intron | 20.0% |
| !! | AACTGTAAATAAAGTAACAT+TGG | - | tig0045716:1372-1391 | Msa1465910:intergenic | 20.0% |
| !! | TATGAAAATTAAATGCTTCT+TGG | + | tig0045716:1434-1453 | Msa1465910:three_prime_UTR | 20.0% |
| !! | ATTATTACTGTTTTCCTGTT+AGG | + | tig0045716:503-522 | Msa1465910:intron | 25.0% |
| !! | TTATTACTGTTTTCCTGTTA+GGG | + | tig0045716:504-523 | Msa1465910:intron | 25.0% |
| !! | TTCCAAAAAAATTTTGTACC+TGG | - | tig0045716:848-867 | Msa1465910:intergenic | 25.0% |
| ! | ACATAAAGCTATAAATGATG+AGG | + | tig0045716:935-954 | Msa1465910:CDS | 25.0% |
| ! | CATAAAGCTATAAATGATGA+GGG | + | tig0045716:936-955 | Msa1465910:CDS | 25.0% |
| !! | GTAATATCTTTTCTAATTCC+AGG | - | tig0045716:1058-1077 | Msa1465910:intergenic | 25.0% |
| ! | ATTAAATGCTTCTTGGTATA+AGG | + | tig0045716:1441-1460 | Msa1465910:three_prime_UTR | 25.0% |
| !! | ATTATTACTGTTTTCCTGTT+AGG | + | tig0045716:503-522 | Msa1465910:intron | 25.0% |
| !! | TTATTACTGTTTTCCTGTTA+GGG | + | tig0045716:504-523 | Msa1465910:intron | 25.0% |
| !! | TTCCAAAAAAATTTTGTACC+TGG | - | tig0045716:848-867 | Msa1465910:intergenic | 25.0% |
| ! | ACATAAAGCTATAAATGATG+AGG | + | tig0045716:935-954 | Msa1465910:CDS | 25.0% |
| ! | CATAAAGCTATAAATGATGA+GGG | + | tig0045716:936-955 | Msa1465910:CDS | 25.0% |
| !! | GTAATATCTTTTCTAATTCC+AGG | - | tig0045716:1058-1077 | Msa1465910:intergenic | 25.0% |
| ! | ATTAAATGCTTCTTGGTATA+AGG | + | tig0045716:1441-1460 | Msa1465910:three_prime_UTR | 25.0% |
| CAAGATTACTCAAGAAAAGA+AGG | + | tig0045716:396-415 | Msa1465910:CDS | 30.0% | |
| !! | TTGATTTTGAGTCTTCTTCA+TGG | + | tig0045716:588-607 | Msa1465910:intron | 30.0% |
| ! | AGTTTTTGTCTTGCAAGTAA+AGG | + | tig0045716:673-692 | Msa1465910:CDS | 30.0% |
| ! | GTTTTTGTCTTGCAAGTAAA+GGG | + | tig0045716:674-693 | Msa1465910:CDS | 30.0% |
| TTTAATGTCACACATCTTGA+TGG | + | tig0045716:779-798 | Msa1465910:CDS | 30.0% | |
| !!! | AGCCAGGTACAAAATTTTTT+TGG | + | tig0045716:843-862 | Msa1465910:intron | 30.0% |
| !! | GAATGTTCATGTTACTTTGT+AGG | + | tig0045716:909-928 | Msa1465910:intron | 30.0% |
| CAACACTAAACTTGATGTAT+AGG | - | tig0045716:998-1017 | Msa1465910:intergenic | 30.0% | |
| ACTGCATCTTAGTTTATCTT+AGG | + | tig0045716:1337-1356 | Msa1465910:three_prime_UTR | 30.0% | |
| CAAGATTACTCAAGAAAAGA+AGG | + | tig0045716:396-415 | Msa1465910:CDS | 30.0% | |
| !! | TTGATTTTGAGTCTTCTTCA+TGG | + | tig0045716:588-607 | Msa1465910:intron | 30.0% |
| ! | AGTTTTTGTCTTGCAAGTAA+AGG | + | tig0045716:673-692 | Msa1465910:CDS | 30.0% |
| ! | GTTTTTGTCTTGCAAGTAAA+GGG | + | tig0045716:674-693 | Msa1465910:CDS | 30.0% |
| TTTAATGTCACACATCTTGA+TGG | + | tig0045716:779-798 | Msa1465910:CDS | 30.0% | |
| !!! | AGCCAGGTACAAAATTTTTT+TGG | + | tig0045716:843-862 | Msa1465910:intron | 30.0% |
| !! | GAATGTTCATGTTACTTTGT+AGG | + | tig0045716:909-928 | Msa1465910:intron | 30.0% |
| CAACACTAAACTTGATGTAT+AGG | - | tig0045716:998-1017 | Msa1465910:intergenic | 30.0% | |
| ACTGCATCTTAGTTTATCTT+AGG | + | tig0045716:1337-1356 | Msa1465910:three_prime_UTR | 30.0% | |
| AAGATTACCAGAAGGCAAAT+TGG | + | tig0045716:194-213 | Msa1465910:CDS | 35.0% | |
| CAGAAGCAGCTTAACAAATA+TGG | - | tig0045716:292-311 | Msa1465910:intergenic | 35.0% | |
| TATAAACCACAATCCCTAAC+AGG | - | tig0045716:520-539 | Msa1465910:intergenic | 35.0% | |
| GAAGACTCAAAATCAACTTC+TGG | - | tig0045716:584-603 | Msa1465910:intergenic | 35.0% | |
| TCAAATTGTGTTCAATGTGG+AGG | - | tig0045716:730-749 | Msa1465910:intergenic | 35.0% | |
| AGCTCAAATTGTGTTCAATG+TGG | - | tig0045716:733-752 | Msa1465910:intergenic | 35.0% | |
| ACACAATTTGAGCTTAACTG+AGG | + | tig0045716:739-758 | Msa1465910:CDS | 35.0% | |
| CAAGATGTGTGACATTAAAC+TGG | - | tig0045716:778-797 | Msa1465910:intergenic | 35.0% | |
| !! | CAAGTTTAGTGTTGATTTCC+CGG | + | tig0045716:1004-1023 | Msa1465910:CDS | 35.0% |
| ! | TCTTTTCTAATTCCAGGCTT+TGG | - | tig0045716:1052-1071 | Msa1465910:intergenic | 35.0% |
| ! | AAGTTCTTGCTTGTCTTTTG+AGG | - | tig0045716:1080-1099 | Msa1465910:intergenic | 35.0% |
| ! | ACAATCATCTACCTCCTTTT+GGG | - | tig0045716:1105-1124 | Msa1465910:intergenic | 35.0% |
| TGCAATATTGACATCATGCA+GGG | - | tig0045716:1138-1157 | Msa1465910:intergenic | 35.0% | |
| !! | TACCTATGCTATTTGGTTCT+TGG | + | tig0045716:1498-1517 | Msa1465910:three_prime_UTR | 35.0% |
| AAGATTACCAGAAGGCAAAT+TGG | + | tig0045716:194-213 | Msa1465910:CDS | 35.0% | |
| CAGAAGCAGCTTAACAAATA+TGG | - | tig0045716:292-311 | Msa1465910:intergenic | 35.0% | |
| TATAAACCACAATCCCTAAC+AGG | - | tig0045716:520-539 | Msa1465910:intergenic | 35.0% | |
| GAAGACTCAAAATCAACTTC+TGG | - | tig0045716:584-603 | Msa1465910:intergenic | 35.0% | |
| TCAAATTGTGTTCAATGTGG+AGG | - | tig0045716:730-749 | Msa1465910:intergenic | 35.0% | |
| AGCTCAAATTGTGTTCAATG+TGG | - | tig0045716:733-752 | Msa1465910:intergenic | 35.0% | |
| ACACAATTTGAGCTTAACTG+AGG | + | tig0045716:739-758 | Msa1465910:CDS | 35.0% | |
| CAAGATGTGTGACATTAAAC+TGG | - | tig0045716:778-797 | Msa1465910:intergenic | 35.0% | |
| !! | CAAGTTTAGTGTTGATTTCC+CGG | + | tig0045716:1004-1023 | Msa1465910:CDS | 35.0% |
| ! | TCTTTTCTAATTCCAGGCTT+TGG | - | tig0045716:1052-1071 | Msa1465910:intergenic | 35.0% |
| ! | AAGTTCTTGCTTGTCTTTTG+AGG | - | tig0045716:1080-1099 | Msa1465910:intergenic | 35.0% |
| ! | ACAATCATCTACCTCCTTTT+GGG | - | tig0045716:1105-1124 | Msa1465910:intergenic | 35.0% |
| TGCAATATTGACATCATGCA+GGG | - | tig0045716:1138-1157 | Msa1465910:intergenic | 35.0% | |
| !! | TACCTATGCTATTTGGTTCT+TGG | + | tig0045716:1498-1517 | Msa1465910:three_prime_UTR | 35.0% |
| CAGGTATGAAGATTACCAGA+AGG | + | tig0045716:186-205 | Msa1465910:CDS | 40.0% | |
| AACAATAATGCATGAGCTGC+TGG | - | tig0045716:326-345 | Msa1465910:intergenic | 40.0% | |
| AGCTCATGCATTATTGTTGC+AGG | + | tig0045716:328-347 | Msa1465910:intron | 40.0% | |
| ! | TCTTGTTTCCCTTGCATTGA+GGG | - | tig0045716:381-400 | Msa1465910:intergenic | 40.0% |
| ! | ATCTTGTTTCCCTTGCATTG+AGG | - | tig0045716:382-401 | Msa1465910:intergenic | 40.0% |
| ! | TACTCAAGAAAAGAAGGTGC+TGG | + | tig0045716:402-421 | Msa1465910:CDS | 40.0% |
| GGTCACAAGATTGTATTCGA+AGG | + | tig0045716:454-473 | Msa1465910:CDS | 40.0% | |
| ! | TGTTTTCCTGTTAGGGATTG+TGG | + | tig0045716:511-530 | Msa1465910:intron | 40.0% |
| ATGTCTCCTGTGATTGTATC+AGG | - | tig0045716:653-672 | Msa1465910:intergenic | 40.0% | |
| TAAAGGGACATCCGAAGTTT+CGG | + | tig0045716:690-709 | Msa1465910:CDS | 40.0% | |
| ATGTCACACATCTTGATGGA+AGG | + | tig0045716:783-802 | Msa1465910:CDS | 40.0% | |
| TCTTGATGGAAGGCAACTAT+TGG | + | tig0045716:793-812 | Msa1465910:CDS | 40.0% | |
| !! | TAGTGTTGATTTCCCGGATT+CGG | + | tig0045716:1010-1029 | Msa1465910:CDS | 40.0% |
| AAGCAAGAACTTGTCCCAAA+AGG | + | tig0045716:1088-1107 | Msa1465910:CDS | 40.0% | |
| ! | CACAATCATCTACCTCCTTT+TGG | - | tig0045716:1106-1125 | Msa1465910:intergenic | 40.0% |
| AAAGGAGGTAGATGATTGTG+AGG | + | tig0045716:1106-1125 | Msa1465910:CDS | 40.0% | |
| AATATTGACATCATGCAGGG+TGG | - | tig0045716:1135-1154 | Msa1465910:intergenic | 40.0% | |
| CTGCAATATTGACATCATGC+AGG | - | tig0045716:1139-1158 | Msa1465910:intergenic | 40.0% | |
| GCATGATGTCAATATTGCAG+AGG | + | tig0045716:1139-1158 | Msa1465910:CDS | 40.0% | |
| AAAGAAGCAACAATACCGTG+AGG | + | tig0045716:1172-1191 | Msa1465910:CDS | 40.0% | |
| TGCATGCTACCTATGCTATT+TGG | + | tig0045716:1491-1510 | Msa1465910:three_prime_UTR | 40.0% | |
| AGCCAAGAACCAAATAGCAT+AGG | - | tig0045716:1503-1522 | Msa1465910:intergenic | 40.0% | |
| CAGGTATGAAGATTACCAGA+AGG | + | tig0045716:186-205 | Msa1465910:CDS | 40.0% | |
| AACAATAATGCATGAGCTGC+TGG | - | tig0045716:326-345 | Msa1465910:intergenic | 40.0% | |
| AGCTCATGCATTATTGTTGC+AGG | + | tig0045716:328-347 | Msa1465910:intron | 40.0% | |
| ! | TCTTGTTTCCCTTGCATTGA+GGG | - | tig0045716:381-400 | Msa1465910:intergenic | 40.0% |
| ! | ATCTTGTTTCCCTTGCATTG+AGG | - | tig0045716:382-401 | Msa1465910:intergenic | 40.0% |
| ! | TACTCAAGAAAAGAAGGTGC+TGG | + | tig0045716:402-421 | Msa1465910:CDS | 40.0% |
| GGTCACAAGATTGTATTCGA+AGG | + | tig0045716:454-473 | Msa1465910:CDS | 40.0% | |
| ! | TGTTTTCCTGTTAGGGATTG+TGG | + | tig0045716:511-530 | Msa1465910:intron | 40.0% |
| ATGTCTCCTGTGATTGTATC+AGG | - | tig0045716:653-672 | Msa1465910:intergenic | 40.0% | |
| TAAAGGGACATCCGAAGTTT+CGG | + | tig0045716:690-709 | Msa1465910:CDS | 40.0% | |
| ATGTCACACATCTTGATGGA+AGG | + | tig0045716:783-802 | Msa1465910:CDS | 40.0% | |
| TCTTGATGGAAGGCAACTAT+TGG | + | tig0045716:793-812 | Msa1465910:CDS | 40.0% | |
| !! | TAGTGTTGATTTCCCGGATT+CGG | + | tig0045716:1010-1029 | Msa1465910:CDS | 40.0% |
| AAGCAAGAACTTGTCCCAAA+AGG | + | tig0045716:1088-1107 | Msa1465910:CDS | 40.0% | |
| ! | CACAATCATCTACCTCCTTT+TGG | - | tig0045716:1106-1125 | Msa1465910:intergenic | 40.0% |
| AAAGGAGGTAGATGATTGTG+AGG | + | tig0045716:1106-1125 | Msa1465910:CDS | 40.0% | |
| AATATTGACATCATGCAGGG+TGG | - | tig0045716:1135-1154 | Msa1465910:intergenic | 40.0% | |
| CTGCAATATTGACATCATGC+AGG | - | tig0045716:1139-1158 | Msa1465910:intergenic | 40.0% | |
| GCATGATGTCAATATTGCAG+AGG | + | tig0045716:1139-1158 | Msa1465910:CDS | 40.0% | |
| AAAGAAGCAACAATACCGTG+AGG | + | tig0045716:1172-1191 | Msa1465910:CDS | 40.0% | |
| TGCATGCTACCTATGCTATT+TGG | + | tig0045716:1491-1510 | Msa1465910:three_prime_UTR | 40.0% | |
| AGCCAAGAACCAAATAGCAT+AGG | - | tig0045716:1503-1522 | Msa1465910:intergenic | 40.0% | |
| GGTTCAAAAAGTGGAACTGC+TGG | + | tig0045716:140-159 | Msa1465910:CDS | 45.0% | |
| CAAAAAGTGGAACTGCTGGA+AGG | + | tig0045716:144-163 | Msa1465910:CDS | 45.0% | |
| TAATCTTCATACCTGTGCCC+TGG | - | tig0045716:181-200 | Msa1465910:intergenic | 45.0% | |
| TACCAGAAGGCAAATTGGAC+TGG | + | tig0045716:199-218 | Msa1465910:CDS | 45.0% | |
| ACCAGAAGGCAAATTGGACT+GGG | + | tig0045716:200-219 | Msa1465910:CDS | 45.0% | |
| TTACCTGTTCCTTTGCAGTC+AGG | - | tig0045716:254-273 | Msa1465910:intergenic | 45.0% | |
| GACTGCAAAGGAACAGGTAA+TGG | + | tig0045716:254-273 | Msa1465910:intron | 45.0% | |
| ATGCATTATTGTTGCAGGCG+AGG | + | tig0045716:333-352 | Msa1465910:intron | 45.0% | |
| AGATAGATGCCCTCAATGCA+AGG | + | tig0045716:369-388 | Msa1465910:CDS | 45.0% | |
| GATAGATGCCCTCAATGCAA+GGG | + | tig0045716:370-389 | Msa1465910:CDS | 45.0% | |
| !! | TCAAGAAAAGAAGGTGCTGG+AGG | + | tig0045716:405-424 | Msa1465910:CDS | 45.0% |
| ATGCAGCCTGATACAATCAC+AGG | + | tig0045716:644-663 | Msa1465910:intron | 45.0% | |
| CTATTGGTCAAATCGAACCC+CGG | + | tig0045716:809-828 | Msa1465910:CDS | 45.0% | |
| TATAGGCGTCCCTTCATGAA+CGG | - | tig0045716:981-1000 | Msa1465910:intergenic | 45.0% | |
| !! | AGTGTTGATTTCCCGGATTC+GGG | + | tig0045716:1011-1030 | Msa1465910:CDS | 45.0% |
| !! | TAATTCCAGGCTTTGGCTTG+GGG | - | tig0045716:1045-1064 | Msa1465910:intergenic | 45.0% |
| ! | CTAATTCCAGGCTTTGGCTT+GGG | - | tig0045716:1046-1065 | Msa1465910:intergenic | 45.0% |
| ! | TCTAATTCCAGGCTTTGGCT+TGG | - | tig0045716:1047-1066 | Msa1465910:intergenic | 45.0% |
| CAAGAACTTGTCCCAAAAGG+AGG | + | tig0045716:1091-1110 | Msa1465910:CDS | 45.0% | |
| CATCGTCATCATATGCCTCA+CGG | - | tig0045716:1190-1209 | Msa1465910:intergenic | 45.0% | |
| GGTTCAAAAAGTGGAACTGC+TGG | + | tig0045716:140-159 | Msa1465910:CDS | 45.0% | |
| CAAAAAGTGGAACTGCTGGA+AGG | + | tig0045716:144-163 | Msa1465910:CDS | 45.0% | |
| TAATCTTCATACCTGTGCCC+TGG | - | tig0045716:181-200 | Msa1465910:intergenic | 45.0% | |
| TACCAGAAGGCAAATTGGAC+TGG | + | tig0045716:199-218 | Msa1465910:CDS | 45.0% | |
| ACCAGAAGGCAAATTGGACT+GGG | + | tig0045716:200-219 | Msa1465910:CDS | 45.0% | |
| TTACCTGTTCCTTTGCAGTC+AGG | - | tig0045716:254-273 | Msa1465910:intergenic | 45.0% | |
| GACTGCAAAGGAACAGGTAA+TGG | + | tig0045716:254-273 | Msa1465910:intron | 45.0% | |
| ATGCATTATTGTTGCAGGCG+AGG | + | tig0045716:333-352 | Msa1465910:intron | 45.0% | |
| AGATAGATGCCCTCAATGCA+AGG | + | tig0045716:369-388 | Msa1465910:CDS | 45.0% | |
| GATAGATGCCCTCAATGCAA+GGG | + | tig0045716:370-389 | Msa1465910:CDS | 45.0% | |
| !! | TCAAGAAAAGAAGGTGCTGG+AGG | + | tig0045716:405-424 | Msa1465910:CDS | 45.0% |
| ATGCAGCCTGATACAATCAC+AGG | + | tig0045716:644-663 | Msa1465910:intron | 45.0% | |
| CTATTGGTCAAATCGAACCC+CGG | + | tig0045716:809-828 | Msa1465910:CDS | 45.0% | |
| TATAGGCGTCCCTTCATGAA+CGG | - | tig0045716:981-1000 | Msa1465910:intergenic | 45.0% | |
| !! | AGTGTTGATTTCCCGGATTC+GGG | + | tig0045716:1011-1030 | Msa1465910:CDS | 45.0% |
| !! | TAATTCCAGGCTTTGGCTTG+GGG | - | tig0045716:1045-1064 | Msa1465910:intergenic | 45.0% |
| ! | CTAATTCCAGGCTTTGGCTT+GGG | - | tig0045716:1046-1065 | Msa1465910:intergenic | 45.0% |
| ! | TCTAATTCCAGGCTTTGGCT+TGG | - | tig0045716:1047-1066 | Msa1465910:intergenic | 45.0% |
| CAAGAACTTGTCCCAAAAGG+AGG | + | tig0045716:1091-1110 | Msa1465910:CDS | 45.0% | |
| CATCGTCATCATATGCCTCA+CGG | - | tig0045716:1190-1209 | Msa1465910:intergenic | 45.0% | |
| !!! | GGAACTGCTGGAAGGTGTTT+TGG | + | tig0045716:152-171 | Msa1465910:CDS | 50.0% |
| !!! | TGGAAGGTGTTTTGGATGCC+AGG | + | tig0045716:160-179 | Msa1465910:CDS | 50.0% |
| !!! | GGAAGGTGTTTTGGATGCCA+GGG | + | tig0045716:161-180 | Msa1465910:CDS | 50.0% |
| TGTCCTGACTGCAAAGGAAC+AGG | + | tig0045716:248-267 | Msa1465910:CDS | 50.0% | |
| ! | CTGGAGGTGCATGTGGAAAA+GGG | + | tig0045716:421-440 | Msa1465910:CDS | 50.0% |
| ! | TGGAGGTGCATGTGGAAAAG+GGG | + | tig0045716:422-441 | Msa1465910:CDS | 50.0% |
| AGCTTAACTGAGGCTCTCTG+TGG | + | tig0045716:749-768 | Msa1465910:CDS | 50.0% | |
| GATGAGGGAATGCCACAACA+TGG | + | tig0045716:951-970 | Msa1465910:CDS | 50.0% | |
| AGGGAATGCCACAACATGGT+AGG | + | tig0045716:955-974 | Msa1465910:CDS | 50.0% | |
| ATGAACGGCCTACCATGTTG+TGG | - | tig0045716:966-985 | Msa1465910:intergenic | 50.0% | |
| ACATGGTAGGCCGTTCATGA+AGG | + | tig0045716:968-987 | Msa1465910:CDS | 50.0% | |
| CATGGTAGGCCGTTCATGAA+GGG | + | tig0045716:969-988 | Msa1465910:CDS | 50.0% | |
| GGGAAAGAAAACCCGAATCC+GGG | - | tig0045716:1025-1044 | Msa1465910:intergenic | 50.0% | |
| GGGGAAAGAAAACCCGAATC+CGG | - | tig0045716:1026-1045 | Msa1465910:intergenic | 50.0% | |
| !!! | GGAACTGCTGGAAGGTGTTT+TGG | + | tig0045716:152-171 | Msa1465910:CDS | 50.0% |
| !!! | TGGAAGGTGTTTTGGATGCC+AGG | + | tig0045716:160-179 | Msa1465910:CDS | 50.0% |
| !!! | GGAAGGTGTTTTGGATGCCA+GGG | + | tig0045716:161-180 | Msa1465910:CDS | 50.0% |
| TGTCCTGACTGCAAAGGAAC+AGG | + | tig0045716:248-267 | Msa1465910:CDS | 50.0% | |
| ! | CTGGAGGTGCATGTGGAAAA+GGG | + | tig0045716:421-440 | Msa1465910:CDS | 50.0% |
| ! | TGGAGGTGCATGTGGAAAAG+GGG | + | tig0045716:422-441 | Msa1465910:CDS | 50.0% |
| AGCTTAACTGAGGCTCTCTG+TGG | + | tig0045716:749-768 | Msa1465910:CDS | 50.0% | |
| GATGAGGGAATGCCACAACA+TGG | + | tig0045716:951-970 | Msa1465910:CDS | 50.0% | |
| AGGGAATGCCACAACATGGT+AGG | + | tig0045716:955-974 | Msa1465910:CDS | 50.0% | |
| ATGAACGGCCTACCATGTTG+TGG | - | tig0045716:966-985 | Msa1465910:intergenic | 50.0% | |
| ACATGGTAGGCCGTTCATGA+AGG | + | tig0045716:968-987 | Msa1465910:CDS | 50.0% | |
| CATGGTAGGCCGTTCATGAA+GGG | + | tig0045716:969-988 | Msa1465910:CDS | 50.0% | |
| GGGAAAGAAAACCCGAATCC+GGG | - | tig0045716:1025-1044 | Msa1465910:intergenic | 50.0% | |
| GGGGAAAGAAAACCCGAATC+CGG | - | tig0045716:1026-1045 | Msa1465910:intergenic | 50.0% | |
| !! | TGTTTTGGATGCCAGGGCAC+AGG | + | tig0045716:167-186 | Msa1465910:CDS | 55.0% |
| GCCCAGTCCAATTTGCCTTC+TGG | - | tig0045716:204-223 | Msa1465910:intergenic | 55.0% | |
| CACGTCTGTCCTGACTGCAA+AGG | + | tig0045716:242-261 | Msa1465910:CDS | 55.0% | |
| ! | GCTGGAGGTGCATGTGGAAA+AGG | + | tig0045716:420-439 | Msa1465910:CDS | 55.0% |
| TGTGGAAAAGGGGATGCAGC+AGG | + | tig0045716:432-451 | Msa1465910:CDS | 55.0% | |
| GTGGAAAAGGGGATGCAGCA+GGG | + | tig0045716:433-452 | Msa1465910:CDS | 55.0% | |
| AGGGACATCCGAAGTTTCGG+AGG | + | tig0045716:693-712 | Msa1465910:CDS | 55.0% | |
| GGGACATCCGAAGTTTCGGA+GGG | + | tig0045716:694-713 | Msa1465910:CDS | 55.0% | |
| TCACGCTCCCTCCGAAACTT+CGG | - | tig0045716:704-723 | Msa1465910:intergenic | 55.0% | |
| ! | ACCTGGCTTGATGACTTCGC+CGG | - | tig0045716:831-850 | Msa1465910:intergenic | 55.0% |
| TCTTTCCCCAAGCCAAAGCC+TGG | + | tig0045716:1037-1056 | Msa1465910:CDS | 55.0% | |
| ATGATGAGCACTCGCAGCCT+CGG | + | tig0045716:1219-1238 | Msa1465910:CDS | 55.0% | |
| !! | TGTTTTGGATGCCAGGGCAC+AGG | + | tig0045716:167-186 | Msa1465910:CDS | 55.0% |
| GCCCAGTCCAATTTGCCTTC+TGG | - | tig0045716:204-223 | Msa1465910:intergenic | 55.0% | |
| CACGTCTGTCCTGACTGCAA+AGG | + | tig0045716:242-261 | Msa1465910:CDS | 55.0% | |
| ! | GCTGGAGGTGCATGTGGAAA+AGG | + | tig0045716:420-439 | Msa1465910:CDS | 55.0% |
| TGTGGAAAAGGGGATGCAGC+AGG | + | tig0045716:432-451 | Msa1465910:CDS | 55.0% | |
| GTGGAAAAGGGGATGCAGCA+GGG | + | tig0045716:433-452 | Msa1465910:CDS | 55.0% | |
| AGGGACATCCGAAGTTTCGG+AGG | + | tig0045716:693-712 | Msa1465910:CDS | 55.0% | |
| GGGACATCCGAAGTTTCGGA+GGG | + | tig0045716:694-713 | Msa1465910:CDS | 55.0% | |
| TCACGCTCCCTCCGAAACTT+CGG | - | tig0045716:704-723 | Msa1465910:intergenic | 55.0% | |
| ! | ACCTGGCTTGATGACTTCGC+CGG | - | tig0045716:831-850 | Msa1465910:intergenic | 55.0% |
| TCTTTCCCCAAGCCAAAGCC+TGG | + | tig0045716:1037-1056 | Msa1465910:CDS | 55.0% | |
| ATGATGAGCACTCGCAGCCT+CGG | + | tig0045716:1219-1238 | Msa1465910:CDS | 55.0% | |
| !! | GAAGGTGCTGGAGGTGCATG+TGG | + | tig0045716:414-433 | Msa1465910:CDS | 60.0% |
| ! | CTGGCTTGATGACTTCGCCG+GGG | - | tig0045716:829-848 | Msa1465910:intergenic | 60.0% |
| ! | CCTGGCTTGATGACTTCGCC+GGG | - | tig0045716:830-849 | Msa1465910:intergenic | 60.0% |
| TGATGAGCACTCGCAGCCTC+GGG | + | tig0045716:1220-1239 | Msa1465910:CDS | 60.0% | |
| TGTTGAGCGCATTGCACCCG+AGG | - | tig0045716:1239-1258 | Msa1465910:intergenic | 60.0% | |
| !! | GAAGGTGCTGGAGGTGCATG+TGG | + | tig0045716:414-433 | Msa1465910:CDS | 60.0% |
| ! | CTGGCTTGATGACTTCGCCG+GGG | - | tig0045716:829-848 | Msa1465910:intergenic | 60.0% |
| ! | CCTGGCTTGATGACTTCGCC+GGG | - | tig0045716:830-849 | Msa1465910:intergenic | 60.0% |
| TGATGAGCACTCGCAGCCTC+GGG | + | tig0045716:1220-1239 | Msa1465910:CDS | 60.0% | |
| TGTTGAGCGCATTGCACCCG+AGG | - | tig0045716:1239-1258 | Msa1465910:intergenic | 60.0% | |
| CCCGGCGAAGTCATCAAGCC+AGG | + | tig0045716:827-846 | Msa1465910:CDS | 65.0% | |
| CCCGGCGAAGTCATCAAGCC+AGG | + | tig0045716:827-846 | Msa1465910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0045716 | gene | 137 | 1537 | 137 | ID=Msa1465910;Name=Msa1465910 |
| tig0045716 | mRNA | 137 | 1537 | 137 | ID=Msa1465910-mRNA-1;Parent=Msa1465910;Name=Msa1465910-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.66|0.5|1|1|1|4|275|268 |
| tig0045716 | exon | 137 | 269 | 137 | ID=Msa1465910-mRNA-1:exon:24924;Parent=Msa1465910-mRNA-1 |
| tig0045716 | exon | 350 | 492 | 350 | ID=Msa1465910-mRNA-1:exon:24925;Parent=Msa1465910-mRNA-1 |
| tig0045716 | exon | 650 | 848 | 650 | ID=Msa1465910-mRNA-1:exon:24926;Parent=Msa1465910-mRNA-1 |
| tig0045716 | exon | 931 | 1537 | 931 | ID=Msa1465910-mRNA-1:exon:24927;Parent=Msa1465910-mRNA-1 |
| tig0045716 | CDS | 137 | 269 | 137 | ID=Msa1465910-mRNA-1:cds;Parent=Msa1465910-mRNA-1 |
| tig0045716 | CDS | 350 | 492 | 350 | ID=Msa1465910-mRNA-1:cds;Parent=Msa1465910-mRNA-1 |
| tig0045716 | CDS | 650 | 848 | 650 | ID=Msa1465910-mRNA-1:cds;Parent=Msa1465910-mRNA-1 |
| tig0045716 | CDS | 931 | 1262 | 931 | ID=Msa1465910-mRNA-1:cds;Parent=Msa1465910-mRNA-1 |
| tig0045716 | three_prime_UTR | 1263 | 1537 | 1263 | ID=Msa1465910-mRNA-1:three_prime_utr;Parent=Msa1465910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
