Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000572.t1 | KEH22718.1 | 95.8 | 591 | 25 | 0 | 1 | 591 | 1 | 591 | 0.00E+00 | 1112.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000572.t1 | F4J7S8 | 55.6 | 586 | 219 | 14 | 3 | 578 | 5 | 559 | 1.8e-166 | 587.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000572.t1 | A0A072U0Q1 | 95.8 | 591 | 25 | 0 | 1 | 591 | 1 | 591 | 0.0e+00 | 1112.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene23312 | MS.gene000572 | PPI |
MS.gene000572 | MS.gene014259 | PPI |
MS.gene50746 | MS.gene000572 | PPI |
MS.gene000572 | MS.gene68200 | PPI |
MS.gene68793 | MS.gene000572 | PPI |
MS.gene003698 | MS.gene000572 | PPI |
MS.gene063145 | MS.gene000572 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000572.t1 | MTR_7g056587 | 95.770 | 591 | 25 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1149 |
MS.gene000572.t1 | MTR_7g056587 | 95.756 | 589 | 25 | 0 | 3 | 591 | 11 | 599 | 0.0 | 1145 |
MS.gene000572.t1 | MTR_7g056587 | 95.548 | 584 | 26 | 0 | 1 | 584 | 23 | 606 | 0.0 | 1134 |
MS.gene000572.t1 | MTR_7g056587 | 95.533 | 582 | 26 | 0 | 3 | 584 | 11 | 592 | 0.0 | 1129 |
MS.gene000572.t1 | MTR_7g056587 | 95.503 | 467 | 21 | 0 | 118 | 584 | 1 | 467 | 0.0 | 932 |
MS.gene000572.t1 | MTR_3g117100 | 43.689 | 618 | 302 | 12 | 4 | 585 | 14 | 621 | 2.81e-169 | 495 |
MS.gene000572.t1 | MTR_1g022480 | 45.017 | 602 | 300 | 10 | 11 | 585 | 20 | 617 | 2.59e-165 | 485 |
MS.gene000572.t1 | MTR_1g022480 | 45.349 | 602 | 300 | 11 | 11 | 585 | 20 | 619 | 2.88e-165 | 485 |
MS.gene000572.t1 | MTR_1g022480 | 44.499 | 609 | 300 | 11 | 11 | 585 | 20 | 624 | 9.45e-163 | 479 |
MS.gene000572.t1 | MTR_4g070810 | 43.403 | 576 | 285 | 10 | 42 | 585 | 48 | 614 | 5.63e-156 | 461 |
MS.gene000572.t1 | MTR_3g112150 | 43.248 | 585 | 302 | 11 | 6 | 580 | 4 | 568 | 5.70e-149 | 441 |
MS.gene000572.t1 | MTR_5g021050 | 53.283 | 396 | 165 | 6 | 33 | 427 | 11 | 387 | 5.92e-149 | 438 |
MS.gene000572.t1 | MTR_5g021050 | 53.283 | 396 | 165 | 6 | 33 | 427 | 11 | 387 | 1.04e-148 | 437 |
MS.gene000572.t1 | MTR_8g076880 | 43.833 | 527 | 246 | 8 | 63 | 569 | 42 | 538 | 1.41e-143 | 427 |
MS.gene000572.t1 | MTR_4g070720 | 43.554 | 574 | 272 | 12 | 11 | 568 | 12 | 549 | 1.70e-143 | 427 |
MS.gene000572.t1 | MTR_8g071000 | 43.299 | 582 | 286 | 10 | 38 | 586 | 33 | 603 | 4.39e-141 | 422 |
MS.gene000572.t1 | MTR_3g010190 | 60.116 | 346 | 135 | 3 | 1 | 343 | 1 | 346 | 3.09e-140 | 417 |
MS.gene000572.t1 | MTR_1g022480 | 45.365 | 507 | 249 | 8 | 103 | 585 | 31 | 533 | 3.68e-139 | 415 |
MS.gene000572.t1 | MTR_3g117090 | 41.286 | 591 | 289 | 13 | 16 | 586 | 16 | 568 | 2.47e-136 | 409 |
MS.gene000572.t1 | MTR_3g117090 | 42.021 | 564 | 269 | 13 | 16 | 559 | 16 | 541 | 1.26e-134 | 404 |
MS.gene000572.t1 | MTR_4g070790 | 53.933 | 267 | 123 | 0 | 77 | 343 | 61 | 327 | 6.18e-107 | 327 |
MS.gene000572.t1 | MTR_6g015645 | 65.347 | 202 | 70 | 0 | 136 | 337 | 8 | 209 | 8.20e-99 | 308 |
MS.gene000572.t1 | MTR_5g012460 | 45.631 | 309 | 160 | 2 | 35 | 341 | 54 | 356 | 6.11e-96 | 301 |
MS.gene000572.t1 | MTR_4g070780 | 48.913 | 276 | 110 | 4 | 63 | 338 | 26 | 270 | 1.84e-85 | 272 |
MS.gene000572.t1 | MTR_4g070730 | 43.161 | 329 | 141 | 6 | 63 | 390 | 32 | 315 | 2.69e-80 | 258 |
MS.gene000572.t1 | MTR_6g034285 | 50.505 | 99 | 49 | 0 | 136 | 234 | 195 | 293 | 3.73e-25 | 108 |
MS.gene000572.t1 | MTR_3g098530 | 29.323 | 266 | 141 | 10 | 64 | 312 | 29 | 264 | 1.29e-20 | 92.4 |
MS.gene000572.t1 | MTR_3g060670 | 29.911 | 224 | 132 | 6 | 95 | 307 | 26 | 235 | 1.26e-18 | 88.2 |
MS.gene000572.t1 | MTR_2g027140 | 29.439 | 214 | 135 | 5 | 100 | 307 | 38 | 241 | 1.35e-18 | 87.8 |
MS.gene000572.t1 | MTR_8g096170 | 30.645 | 248 | 144 | 11 | 68 | 310 | 21 | 245 | 1.72e-14 | 74.3 |
MS.gene000572.t1 | MTR_2g027140 | 28.061 | 196 | 125 | 5 | 118 | 307 | 1 | 186 | 2.23e-13 | 71.2 |
MS.gene000572.t1 | MTR_8g095360 | 27.189 | 217 | 139 | 6 | 101 | 310 | 182 | 386 | 2.49e-13 | 73.2 |
MS.gene000572.t1 | MTR_4g013300 | 23.548 | 310 | 190 | 12 | 36 | 317 | 46 | 336 | 1.50e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000572.t1 | AT3G24840 | 55.461 | 586 | 221 | 13 | 3 | 578 | 5 | 560 | 0.0 | 620 |
MS.gene000572.t1 | AT3G24840 | 55.461 | 586 | 221 | 13 | 3 | 578 | 5 | 560 | 0.0 | 620 |
MS.gene000572.t1 | AT3G24840 | 55.461 | 586 | 221 | 13 | 3 | 578 | 5 | 560 | 0.0 | 620 |
MS.gene000572.t1 | AT3G24840 | 55.631 | 586 | 219 | 14 | 3 | 578 | 5 | 559 | 0.0 | 618 |
MS.gene000572.t1 | AT3G24840 | 55.631 | 586 | 219 | 14 | 3 | 578 | 5 | 559 | 0.0 | 618 |
MS.gene000572.t1 | AT3G24840 | 55.631 | 586 | 219 | 14 | 3 | 578 | 5 | 559 | 0.0 | 618 |
MS.gene000572.t1 | AT3G24840 | 55.631 | 586 | 219 | 14 | 3 | 578 | 5 | 559 | 0.0 | 618 |
MS.gene000572.t1 | AT4G39170 | 43.707 | 588 | 297 | 10 | 4 | 568 | 14 | 590 | 1.68e-162 | 478 |
MS.gene000572.t1 | AT4G39170 | 43.686 | 586 | 298 | 9 | 4 | 568 | 14 | 588 | 8.64e-162 | 476 |
MS.gene000572.t1 | AT2G21520 | 41.013 | 612 | 320 | 10 | 4 | 580 | 18 | 623 | 1.36e-157 | 466 |
MS.gene000572.t1 | AT2G21520 | 41.013 | 612 | 320 | 10 | 4 | 580 | 18 | 623 | 1.36e-157 | 466 |
MS.gene000572.t1 | AT2G21520 | 40.976 | 615 | 316 | 10 | 4 | 580 | 14 | 619 | 2.46e-157 | 465 |
MS.gene000572.t1 | AT4G36490 | 42.958 | 568 | 266 | 11 | 23 | 573 | 5 | 531 | 1.78e-154 | 454 |
MS.gene000572.t1 | AT1G55690 | 44.146 | 632 | 290 | 14 | 1 | 582 | 1 | 619 | 4.95e-154 | 456 |
MS.gene000572.t1 | AT1G55690 | 44.006 | 634 | 292 | 14 | 1 | 584 | 1 | 621 | 2.55e-153 | 454 |
MS.gene000572.t1 | AT1G55690 | 44.006 | 634 | 292 | 14 | 1 | 584 | 1 | 621 | 2.55e-153 | 454 |
MS.gene000572.t1 | AT1G55690 | 44.006 | 634 | 292 | 14 | 1 | 584 | 1 | 621 | 2.55e-153 | 454 |
MS.gene000572.t1 | AT1G55690 | 44.006 | 634 | 292 | 14 | 1 | 584 | 1 | 621 | 2.55e-153 | 454 |
MS.gene000572.t1 | AT2G21540 | 43.210 | 567 | 262 | 10 | 12 | 565 | 10 | 529 | 5.22e-153 | 451 |
MS.gene000572.t1 | AT2G21540 | 43.210 | 567 | 262 | 10 | 12 | 565 | 10 | 529 | 5.22e-153 | 451 |
MS.gene000572.t1 | AT2G21540 | 43.210 | 567 | 262 | 10 | 12 | 565 | 10 | 529 | 5.22e-153 | 451 |
MS.gene000572.t1 | AT2G21540 | 43.210 | 567 | 262 | 10 | 12 | 565 | 10 | 529 | 5.22e-153 | 451 |
MS.gene000572.t1 | AT2G18180 | 43.040 | 546 | 276 | 10 | 33 | 573 | 19 | 534 | 4.51e-152 | 448 |
MS.gene000572.t1 | AT2G18180 | 43.040 | 546 | 276 | 10 | 33 | 573 | 19 | 534 | 6.50e-152 | 449 |
MS.gene000572.t1 | AT2G21540 | 43.470 | 559 | 266 | 9 | 12 | 565 | 10 | 523 | 9.03e-152 | 447 |
MS.gene000572.t1 | AT2G21540 | 43.470 | 559 | 266 | 9 | 12 | 565 | 10 | 523 | 9.03e-152 | 447 |
MS.gene000572.t1 | AT4G39180 | 42.583 | 573 | 287 | 11 | 7 | 573 | 5 | 541 | 4.03e-150 | 444 |
MS.gene000572.t1 | AT4G39180 | 42.583 | 573 | 287 | 11 | 7 | 573 | 5 | 541 | 4.03e-150 | 444 |
MS.gene000572.t1 | AT4G39180 | 42.757 | 573 | 287 | 11 | 7 | 573 | 5 | 542 | 6.71e-150 | 443 |
MS.gene000572.t1 | AT4G34580 | 42.246 | 561 | 294 | 10 | 18 | 573 | 7 | 542 | 5.71e-145 | 431 |
MS.gene000572.t1 | AT4G34580 | 42.246 | 561 | 294 | 10 | 18 | 573 | 7 | 542 | 5.71e-145 | 431 |
MS.gene000572.t1 | AT5G56160 | 42.531 | 569 | 296 | 11 | 20 | 574 | 15 | 566 | 2.54e-141 | 422 |
MS.gene000572.t1 | AT5G56160 | 42.531 | 569 | 296 | 11 | 20 | 574 | 15 | 566 | 2.54e-141 | 422 |
MS.gene000572.t1 | AT1G75370 | 41.612 | 608 | 307 | 11 | 4 | 580 | 14 | 604 | 2.24e-140 | 421 |
MS.gene000572.t1 | AT1G75370 | 41.612 | 608 | 307 | 11 | 4 | 580 | 14 | 604 | 1.58e-139 | 421 |
MS.gene000572.t1 | AT2G18180 | 43.154 | 482 | 244 | 7 | 97 | 573 | 7 | 463 | 5.11e-137 | 407 |
MS.gene000572.t1 | AT2G18180 | 43.154 | 482 | 244 | 7 | 97 | 573 | 7 | 463 | 8.23e-137 | 407 |
MS.gene000572.t1 | AT1G19650 | 39.268 | 601 | 315 | 8 | 11 | 579 | 18 | 600 | 1.63e-136 | 411 |
MS.gene000572.t1 | AT2G16380 | 40.575 | 557 | 302 | 8 | 18 | 573 | 7 | 535 | 2.17e-132 | 398 |
MS.gene000572.t1 | AT2G16380 | 40.575 | 557 | 302 | 8 | 18 | 573 | 7 | 535 | 2.17e-132 | 398 |
MS.gene000572.t1 | AT1G19650 | 56.442 | 326 | 139 | 3 | 11 | 336 | 18 | 340 | 3.96e-131 | 391 |
MS.gene000572.t1 | AT5G56160 | 56.308 | 325 | 138 | 3 | 20 | 342 | 15 | 337 | 6.46e-129 | 387 |
MS.gene000572.t1 | AT2G18180 | 42.299 | 461 | 236 | 7 | 118 | 573 | 1 | 436 | 8.20e-127 | 380 |
MS.gene000572.t1 | AT1G19650 | 39.845 | 517 | 263 | 6 | 95 | 579 | 28 | 528 | 1.26e-121 | 370 |
MS.gene000572.t1 | AT2G16380 | 41.138 | 457 | 241 | 7 | 118 | 573 | 1 | 430 | 2.11e-108 | 333 |
MS.gene000572.t1 | AT5G47510 | 49.035 | 259 | 132 | 0 | 75 | 333 | 26 | 284 | 8.17e-92 | 286 |
MS.gene000572.t1 | AT5G47510 | 49.035 | 259 | 132 | 0 | 75 | 333 | 26 | 284 | 1.78e-91 | 287 |
MS.gene000572.t1 | AT5G47510 | 49.035 | 259 | 132 | 0 | 75 | 333 | 25 | 283 | 1.88e-91 | 286 |
MS.gene000572.t1 | AT5G47510 | 49.115 | 226 | 115 | 0 | 108 | 333 | 2 | 227 | 8.57e-81 | 257 |
MS.gene000572.t1 | AT5G47730 | 27.755 | 245 | 156 | 6 | 75 | 307 | 6 | 241 | 6.16e-19 | 89.0 |
MS.gene000572.t1 | AT5G47730 | 27.755 | 245 | 156 | 6 | 75 | 307 | 6 | 241 | 6.16e-19 | 89.0 |
MS.gene000572.t1 | AT1G55840 | 29.675 | 246 | 150 | 7 | 75 | 307 | 6 | 241 | 1.54e-18 | 87.4 |
MS.gene000572.t1 | AT1G55840 | 29.091 | 220 | 140 | 5 | 95 | 307 | 4 | 214 | 2.83e-17 | 83.2 |
MS.gene000572.t1 | AT5G47730 | 27.692 | 195 | 127 | 4 | 118 | 307 | 1 | 186 | 7.65e-15 | 75.9 |
MS.gene000572.t1 | AT5G47730 | 27.692 | 195 | 127 | 4 | 118 | 307 | 1 | 186 | 7.65e-15 | 75.9 |
MS.gene000572.t1 | AT1G01630 | 31.604 | 212 | 120 | 9 | 103 | 310 | 55 | 245 | 8.91e-15 | 75.1 |
Find 118 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAGTTTATACAATTATTT+TGG | 0.178126 | 7.2:+46337169 | None:intergenic |
GCAACAAAGCCAACGAAATT+TGG | 0.209682 | 7.2:-46336724 | MS.gene000572:CDS |
ACATAGGAAATTAGCTTCTT+TGG | 0.223417 | 7.2:+46332760 | None:intergenic |
TTGGCAGAGGTTGCGGGATT+TGG | 0.245490 | 7.2:-46332554 | MS.gene000572:CDS |
TCCCGCAACCTCTGCCAAAT+TGG | 0.260370 | 7.2:+46332559 | None:intergenic |
CGGATATAAAAGAGCCAATT+TGG | 0.270344 | 7.2:-46332573 | MS.gene000572:CDS |
CTCTACTCCTCTCATCTTCT+TGG | 0.271153 | 7.2:+46339245 | None:intergenic |
ATCAACATCACCAACTTCTT+TGG | 0.298243 | 7.2:+46334631 | None:intergenic |
ATTCACAGCTTCTTCCTCTT+TGG | 0.304303 | 7.2:+46339054 | None:intergenic |
TAGCATGGTCACTCATAAAT+TGG | 0.316701 | 7.2:-46336659 | MS.gene000572:intron |
GTTCCAGAGCAGATTGTTAG+AGG | 0.330860 | 7.2:-46337064 | MS.gene000572:CDS |
ATGATGTCATACTTTCAAAA+TGG | 0.332799 | 7.2:+46336851 | None:intergenic |
GCCAATTTGGCAGAGGTTGC+GGG | 0.336971 | 7.2:-46332560 | MS.gene000572:CDS |
GAGTCGTTGAGTCGTATAAA+AGG | 0.338314 | 7.2:-46332463 | MS.gene000572:CDS |
TTCTCACGAGGAATTGTTCT+CGG | 0.353462 | 7.2:+46332502 | None:intergenic |
CTAAGACATCCTCCATCATT+TGG | 0.362857 | 7.2:+46336903 | None:intergenic |
TATGTAGGATTTCGTATATA+AGG | 0.388118 | 7.2:-46338124 | MS.gene000572:intron |
CTCCATTGGAGAAAGGAGTA+TGG | 0.389408 | 7.2:-46338396 | MS.gene000572:CDS |
CAACTTCCACCCAGAAAATC+AGG | 0.390012 | 7.2:+46336933 | None:intergenic |
AGATGAGAGGAGTAGAGGTT+TGG | 0.390868 | 7.2:-46339239 | MS.gene000572:CDS |
GTAGTGGGTTCAAGCTAGTA+TGG | 0.398113 | 7.2:-46337229 | MS.gene000572:CDS |
GTCTCAGGAAGCGTAATAAA+CGG | 0.400353 | 7.2:-46339126 | MS.gene000572:CDS |
GGAGCATATCTGCCCACATC+TGG | 0.403184 | 7.2:+46338415 | None:intergenic |
ATGGCTTCTTGGTTGGTTGT+TGG | 0.404166 | 7.2:+46332645 | None:intergenic |
GTTGCTTCTGACGTTGATCC+AGG | 0.406245 | 7.2:+46336506 | None:intergenic |
CAGCTCACATTCTCGCTAGA+AGG | 0.408987 | 7.2:+46336452 | None:intergenic |
AGCCAATTTGGCAGAGGTTG+CGG | 0.415753 | 7.2:-46332561 | MS.gene000572:CDS |
AGCTGAGCTTGCTGAGTCAC+TGG | 0.422989 | 7.2:-46332161 | MS.gene000572:CDS |
TTCATTGTCAATGCTGGTAG+TGG | 0.424448 | 7.2:-46337245 | MS.gene000572:CDS |
AGTCTCGAGCTAGATCTCTT+AGG | 0.425872 | 7.2:-46339186 | MS.gene000572:CDS |
CAGCATTGACAATGAACATC+TGG | 0.433020 | 7.2:+46337252 | None:intergenic |
TAAGACATCCTCCATCATTT+GGG | 0.439847 | 7.2:+46336904 | None:intergenic |
AACAATAATGCCAAAGAAGT+TGG | 0.444155 | 7.2:-46334641 | MS.gene000572:CDS |
AAAATTTGACATTGATAAAA+CGG | 0.445534 | 7.2:-46338439 | MS.gene000572:CDS |
GCATTGTGTGATAATTATCA+TGG | 0.445665 | 7.2:+46338987 | None:intergenic |
TGATAATTATCATGGGAATC+TGG | 0.446600 | 7.2:+46338995 | None:intergenic |
AGAAGCTAATTTCCTATGTC+AGG | 0.450183 | 7.2:-46332756 | MS.gene000572:CDS |
CTAGTATGGAATACAGCAAA+AGG | 0.464361 | 7.2:-46337215 | MS.gene000572:CDS |
CATTATTGTTTGCCTCAACT+AGG | 0.466176 | 7.2:+46334654 | None:intergenic |
CTCCATACTCCTTTCTCCAA+TGG | 0.473262 | 7.2:+46338394 | None:intergenic |
TATGTAGTATTTGCAGCACT+TGG | 0.477817 | 7.2:-46332691 | MS.gene000572:CDS |
GCAGAGGTTGCGGGATTTGG+AGG | 0.478420 | 7.2:-46332551 | MS.gene000572:CDS |
AACAATTCCTCGTGAGAAAG+AGG | 0.480731 | 7.2:-46332497 | MS.gene000572:CDS |
AGAAGGAACTGATTGCATAA+AGG | 0.486246 | 7.2:+46336469 | None:intergenic |
GAGAGCTGGATGCCACTGGC+TGG | 0.488649 | 7.2:+46332614 | None:intergenic |
AGCTGTGAATTCATTTAGAC+TGG | 0.489026 | 7.2:-46339041 | MS.gene000572:CDS |
TCTCAGGAAGCGTAATAAAC+GGG | 0.492189 | 7.2:-46339125 | MS.gene000572:CDS |
GAAGAACTTCCAAATTTCGT+TGG | 0.502786 | 7.2:+46336715 | None:intergenic |
TAACCTCTAACAATCTGCTC+TGG | 0.504827 | 7.2:+46337061 | None:intergenic |
GGTGACATTCATCAACTTGA+TGG | 0.510932 | 7.2:+46338005 | None:intergenic |
CAAGACTCACTTATAGTCTC+AGG | 0.512332 | 7.2:-46339141 | MS.gene000572:CDS |
ACTGATTGCATAAAGGTTGA+AGG | 0.514862 | 7.2:+46336476 | None:intergenic |
GCCTCAACTAGGTTGCAGAT+AGG | 0.516350 | 7.2:+46334665 | None:intergenic |
CACCCAGAAAATCAGGAAGT+TGG | 0.516687 | 7.2:+46336940 | None:intergenic |
CAGATGTTCATTGTCAATGC+TGG | 0.517230 | 7.2:-46337251 | MS.gene000572:CDS |
TTGATAAAACGGTCCAGATG+TGG | 0.520171 | 7.2:-46338428 | MS.gene000572:CDS |
TGTCATACTTTCAAAATGGA+AGG | 0.528732 | 7.2:+46336855 | None:intergenic |
TTGAGAGAGCTGGATGCCAC+TGG | 0.535813 | 7.2:+46332610 | None:intergenic |
TTAGATCTAACAAGGGACCT+TGG | 0.535908 | 7.2:-46336884 | MS.gene000572:CDS |
AATTTATGAGTGACCATGCT+AGG | 0.540881 | 7.2:+46336661 | None:intergenic |
CCAGTGTATATTGAGAGACT+TGG | 0.541011 | 7.2:-46338039 | MS.gene000572:CDS |
GGTTAATTGATTGAGAGAGC+TGG | 0.546632 | 7.2:+46332600 | None:intergenic |
AGACTTCCGCCACTCATCCT+CGG | 0.549948 | 7.2:+46339204 | None:intergenic |
TGTTAGAGGTTATAGACTCA+TGG | 0.552271 | 7.2:-46337050 | MS.gene000572:intron |
CGTATATAAGGAGTTTGAAG+AGG | 0.552893 | 7.2:-46338112 | MS.gene000572:CDS |
AGTTGTTCATGCCCAAATGA+TGG | 0.558876 | 7.2:-46336915 | MS.gene000572:CDS |
CAAGAAGATGAGAGGAGTAG+AGG | 0.558912 | 7.2:-46339244 | MS.gene000572:CDS |
TGTGGGCAGATATGCTCCAT+TGG | 0.561517 | 7.2:-46338410 | MS.gene000572:CDS |
TAAAAGAGCCAATTTGGCAG+AGG | 0.562927 | 7.2:-46332567 | MS.gene000572:CDS |
GTTCAGCGTTATTACCCTCA+TGG | 0.565031 | 7.2:-46338090 | MS.gene000572:CDS |
AGATATGCTCCATTGGAGAA+AGG | 0.571324 | 7.2:-46338403 | MS.gene000572:CDS |
AACACTGAAATATCTGAACC+TGG | 0.573828 | 7.2:-46336524 | MS.gene000572:CDS |
TTTGCTGCTATAGAACATGC+AGG | 0.579513 | 7.2:+46337919 | None:intergenic |
TTCCTATGTCAGGAGTACAT+TGG | 0.581773 | 7.2:-46332746 | MS.gene000572:CDS |
TTAATGCTACAGGTTTCTGA+AGG | 0.583106 | 7.2:-46338466 | MS.gene000572:intron |
TGATAAAACGGTCCAGATGT+GGG | 0.584450 | 7.2:-46338427 | MS.gene000572:CDS |
ACCTATCTGCAACCTAGTTG+AGG | 0.587036 | 7.2:-46334666 | MS.gene000572:CDS |
GTCATACTTTCAAAATGGAA+GGG | 0.587968 | 7.2:+46336856 | None:intergenic |
TATTACCCTCATGGTATGCA+TGG | 0.591911 | 7.2:-46338081 | MS.gene000572:CDS |
AAAATGGAAGGGTCATTCCA+AGG | 0.592390 | 7.2:+46336867 | None:intergenic |
ATGCATGGTGTGGACAATGA+GGG | 0.595175 | 7.2:-46338066 | MS.gene000572:CDS |
TGCGTCTTGAATATAATGCA+AGG | 0.595493 | 7.2:-46339414 | None:intergenic |
TCAAATCATAGTCAGAGTGT+TGG | 0.599895 | 7.2:-46332722 | MS.gene000572:CDS |
CATTGTGTGATAATTATCAT+GGG | 0.600169 | 7.2:+46338988 | None:intergenic |
TCATTGTCAATGCTGGTAGT+GGG | 0.602158 | 7.2:-46337244 | MS.gene000572:CDS |
AGGATGTCTTAGATCTAACA+AGG | 0.607120 | 7.2:-46336892 | MS.gene000572:CDS |
TAATAGTCCAAGAAGATGAG+AGG | 0.609176 | 7.2:-46339252 | MS.gene000572:CDS |
TTGAAACCTCCGAGGATGAG+TGG | 0.610170 | 7.2:-46339213 | MS.gene000572:CDS |
TGACTTGCAAAAGACAAGGA+AGG | 0.610536 | 7.2:-46332431 | MS.gene000572:intron |
ATCCAATGTACTCCTGACAT+AGG | 0.617075 | 7.2:+46332744 | None:intergenic |
TGCATGGTGTGGACAATGAG+GGG | 0.617980 | 7.2:-46338065 | MS.gene000572:CDS |
TATGCATGGTGTGGACAATG+AGG | 0.622195 | 7.2:-46338067 | MS.gene000572:CDS |
CCAAGTCTCTCAATATACAC+TGG | 0.623189 | 7.2:+46338039 | None:intergenic |
GTGACATTCATCAACTTGAT+GGG | 0.624480 | 7.2:+46338006 | None:intergenic |
AGATGTTCGGGATGCCAAAG+AGG | 0.626648 | 7.2:-46339068 | MS.gene000572:CDS |
CCCTCATGGTATGCATGGTG+TGG | 0.629363 | 7.2:-46338076 | MS.gene000572:CDS |
AATAATTGATGTGCAAGGCG+TGG | 0.631385 | 7.2:-46337872 | MS.gene000572:intron |
CACCGAGTCATATCCTAGCA+TGG | 0.636928 | 7.2:-46336674 | MS.gene000572:CDS |
ACTACAATAATTGATGTGCA+AGG | 0.639239 | 7.2:-46337877 | MS.gene000572:CDS |
GACCATGCTAGGATATGACT+CGG | 0.641917 | 7.2:+46336672 | None:intergenic |
AGAATATCCTCTTTCTCACG+AGG | 0.648401 | 7.2:+46332490 | None:intergenic |
TTGCTGCTATAGAACATGCA+GGG | 0.661177 | 7.2:+46337920 | None:intergenic |
ATAATTATCACACAATGCTG+AGG | 0.661865 | 7.2:-46338982 | MS.gene000572:intron |
CCACACCATGCATACCATGA+GGG | 0.664021 | 7.2:+46338076 | None:intergenic |
CCATCAGAAAATCCAGCCAG+TGG | 0.664051 | 7.2:-46332626 | MS.gene000572:CDS |
CTAGGTTGCAGATAGGTGCA+CGG | 0.665393 | 7.2:+46334672 | None:intergenic |
GGAGGCAGTAGTGACTGAGA+TGG | 0.665960 | 7.2:-46332533 | MS.gene000572:CDS |
CATGTTCTATAGCAGCAAAG+CGG | 0.666814 | 7.2:-46337915 | MS.gene000572:CDS |
CTTCCGCCACTCATCCTCGG+AGG | 0.672856 | 7.2:+46339207 | None:intergenic |
AATTTGACTTGCAAAAGACA+AGG | 0.678812 | 7.2:-46332435 | MS.gene000572:CDS |
TCTCAATCAATTAACCACCC+CGG | 0.683871 | 7.2:-46332593 | MS.gene000572:CDS |
TCCACACCATGCATACCATG+AGG | 0.688993 | 7.2:+46338075 | None:intergenic |
AAACCTCCGAGGATGAGTGG+CGG | 0.701273 | 7.2:-46339210 | MS.gene000572:CDS |
ATGGTGTGGACAATGAGGGG+CGG | 0.715287 | 7.2:-46338062 | MS.gene000572:CDS |
TTTGGAGCTTGAAACCTCCG+AGG | 0.723360 | 7.2:-46339221 | MS.gene000572:CDS |
TGTTCATGCCCAAATGATGG+AGG | 0.726201 | 7.2:-46336912 | MS.gene000572:CDS |
GGATGTCTTAGATCTAACAA+GGG | 0.742525 | 7.2:-46336891 | MS.gene000572:CDS |
TGATGGTGATAACTACCCCG+AGG | 0.754717 | 7.2:-46337709 | MS.gene000572:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 46332102 | 46339421 | 46332102 | ID=MS.gene000572 |
chr7.2 | mRNA | 46332102 | 46339421 | 46332102 | ID=MS.gene000572.t1;Parent=MS.gene000572 |
chr7.2 | exon | 46339415 | 46339421 | 46339415 | ID=MS.gene000572.t1.exon1;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46339415 | 46339421 | 46339415 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46338983 | 46339283 | 46338983 | ID=MS.gene000572.t1.exon2;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46338983 | 46339283 | 46338983 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46338377 | 46338476 | 46338377 | ID=MS.gene000572.t1.exon3;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46338377 | 46338476 | 46338377 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46337873 | 46338139 | 46337873 | ID=MS.gene000572.t1.exon4;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46337873 | 46338139 | 46337873 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46337710 | 46337787 | 46337710 | ID=MS.gene000572.t1.exon5;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46337710 | 46337787 | 46337710 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46337181 | 46337282 | 46337181 | ID=MS.gene000572.t1.exon6;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46337181 | 46337282 | 46337181 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46337051 | 46337100 | 46337051 | ID=MS.gene000572.t1.exon7;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46337051 | 46337100 | 46337051 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46336863 | 46336962 | 46336863 | ID=MS.gene000572.t1.exon8;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46336863 | 46336962 | 46336863 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46336660 | 46336764 | 46336660 | ID=MS.gene000572.t1.exon9;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46336660 | 46336764 | 46336660 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46336460 | 46336552 | 46336460 | ID=MS.gene000572.t1.exon10;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46336460 | 46336552 | 46336460 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46334624 | 46334708 | 46334624 | ID=MS.gene000572.t1.exon11;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46334624 | 46334708 | 46334624 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46332432 | 46332811 | 46332432 | ID=MS.gene000572.t1.exon12;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46332432 | 46332811 | 46332432 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
chr7.2 | exon | 46332102 | 46332209 | 46332102 | ID=MS.gene000572.t1.exon13;Parent=MS.gene000572.t1 |
chr7.2 | CDS | 46332102 | 46332209 | 46332102 | ID=cds.MS.gene000572.t1;Parent=MS.gene000572.t1 |
Gene Sequence |
Protein sequence |