Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063145.t1 | XP_003603968.1 | 98.7 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1214.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063145.t1 | F4IHJ0 | 74.7 | 628 | 146 | 5 | 1 | 620 | 1 | 623 | 9.0e-262 | 904.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063145.t1 | G7J770 | 98.7 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1214.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene063145 | 0.846311 | 2.35E-59 | -1.69E-46 |
| MS.gene050071 | MS.gene063145 | 0.82432 | 8.61E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene063145 | -0.833248 | 5.95E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene063145 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene063145 | -0.833198 | 6.12E-56 | -1.69E-46 |
| MS.gene050521 | MS.gene063145 | 0.818964 | 1.49E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene063145 | -0.806268 | 8.93E-50 | -1.69E-46 |
| MS.gene050817 | MS.gene063145 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene050818 | MS.gene063145 | 0.852824 | 3.58E-61 | -1.69E-46 |
| MS.gene050864 | MS.gene063145 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene050894 | MS.gene063145 | 0.876501 | 1.33E-68 | -1.69E-46 |
| MS.gene053097 | MS.gene063145 | 0.807326 | 5.34E-50 | -1.69E-46 |
| MS.gene053218 | MS.gene063145 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene063145 | -0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene054585 | MS.gene063145 | 0.851048 | 1.14E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene063145 | -0.840733 | 7.28E-58 | -1.69E-46 |
| MS.gene054999 | MS.gene063145 | 0.806778 | 6.97E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene063145 | 0.877645 | 5.32E-69 | -1.69E-46 |
| MS.gene055331 | MS.gene063145 | 0.806415 | 8.32E-50 | -1.69E-46 |
| MS.gene055719 | MS.gene063145 | 0.832005 | 1.21E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene063145 | -0.804395 | 2.21E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene063145 | -0.818205 | 2.21E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene063145 | -0.836112 | 1.13E-56 | -1.69E-46 |
| MS.gene056266 | MS.gene063145 | -0.882038 | 1.46E-70 | -1.69E-46 |
| MS.gene056504 | MS.gene063145 | -0.814663 | 1.37E-51 | -1.69E-46 |
| MS.gene058015 | MS.gene063145 | 0.835232 | 1.89E-56 | -1.69E-46 |
| MS.gene058210 | MS.gene063145 | 0.810775 | 9.74E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene063145 | 0.830906 | 2.26E-55 | -1.69E-46 |
| MS.gene058382 | MS.gene063145 | 0.804099 | 2.54E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene063145 | -0.804432 | 2.17E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene063145 | 0.811225 | 7.79E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene063145 | -0.820481 | 6.71E-53 | -1.69E-46 |
| MS.gene060076 | MS.gene063145 | 0.847617 | 1.03E-59 | -1.69E-46 |
| MS.gene060077 | MS.gene063145 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene063145 | -0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene063145 | 0.801367 | 9.31E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene063145 | -0.823947 | 1.05E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene063145 | 0.848433 | 6.15E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063145 | MS.gene39730 | PPI |
| MS.gene063145 | MS.gene49028 | PPI |
| MS.gene063145 | MS.gene46848 | PPI |
| MS.gene063145 | MS.gene000572 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063145.t1 | MTR_3g117100 | 98.716 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1281 |
| MS.gene063145.t1 | MTR_4g070810 | 79.745 | 627 | 112 | 5 | 1 | 623 | 1 | 616 | 0.0 | 1026 |
| MS.gene063145.t1 | MTR_1g022480 | 67.572 | 626 | 191 | 8 | 1 | 622 | 1 | 618 | 0.0 | 860 |
| MS.gene063145.t1 | MTR_1g022480 | 67.516 | 628 | 190 | 9 | 1 | 622 | 1 | 620 | 0.0 | 855 |
| MS.gene063145.t1 | MTR_1g022480 | 66.825 | 633 | 191 | 9 | 1 | 622 | 1 | 625 | 0.0 | 853 |
| MS.gene063145.t1 | MTR_1g022480 | 65.377 | 517 | 169 | 6 | 108 | 622 | 26 | 534 | 0.0 | 694 |
| MS.gene063145.t1 | MTR_3g112150 | 58.814 | 607 | 208 | 7 | 18 | 623 | 7 | 572 | 0.0 | 666 |
| MS.gene063145.t1 | MTR_3g117090 | 54.090 | 599 | 225 | 13 | 28 | 623 | 18 | 569 | 0.0 | 557 |
| MS.gene063145.t1 | MTR_4g070720 | 54.623 | 584 | 215 | 14 | 28 | 609 | 19 | 554 | 0.0 | 556 |
| MS.gene063145.t1 | MTR_8g076880 | 51.820 | 577 | 221 | 8 | 39 | 609 | 17 | 542 | 0.0 | 555 |
| MS.gene063145.t1 | MTR_3g117090 | 54.737 | 570 | 208 | 13 | 28 | 594 | 18 | 540 | 0.0 | 543 |
| MS.gene063145.t1 | MTR_5g021050 | 61.153 | 399 | 122 | 4 | 41 | 439 | 10 | 375 | 3.10e-176 | 509 |
| MS.gene063145.t1 | MTR_5g021050 | 39.604 | 101 | 57 | 2 | 522 | 622 | 378 | 474 | 9.52e-13 | 71.2 |
| MS.gene063145.t1 | MTR_5g021050 | 61.153 | 399 | 122 | 4 | 41 | 439 | 10 | 375 | 3.48e-176 | 509 |
| MS.gene063145.t1 | MTR_5g021050 | 40.196 | 102 | 57 | 2 | 522 | 623 | 378 | 475 | 6.18e-14 | 75.1 |
| MS.gene063145.t1 | MTR_7g056587 | 43.269 | 624 | 300 | 13 | 14 | 623 | 12 | 595 | 6.20e-162 | 477 |
| MS.gene063145.t1 | MTR_7g056587 | 43.269 | 624 | 300 | 13 | 14 | 623 | 26 | 609 | 9.90e-162 | 477 |
| MS.gene063145.t1 | MTR_7g056587 | 43.274 | 617 | 296 | 13 | 14 | 616 | 4 | 580 | 1.94e-159 | 470 |
| MS.gene063145.t1 | MTR_7g056587 | 43.274 | 617 | 296 | 13 | 14 | 616 | 12 | 588 | 3.28e-159 | 470 |
| MS.gene063145.t1 | MTR_3g010190 | 54.436 | 417 | 182 | 5 | 13 | 425 | 4 | 416 | 2.41e-151 | 447 |
| MS.gene063145.t1 | MTR_6g015645 | 50.830 | 482 | 192 | 11 | 146 | 623 | 8 | 448 | 4.19e-146 | 431 |
| MS.gene063145.t1 | MTR_4g070790 | 59.432 | 387 | 83 | 5 | 17 | 395 | 16 | 336 | 1.83e-144 | 424 |
| MS.gene063145.t1 | MTR_4g070730 | 62.356 | 348 | 87 | 5 | 70 | 416 | 29 | 333 | 3.52e-141 | 416 |
| MS.gene063145.t1 | MTR_8g071000 | 41.488 | 605 | 326 | 12 | 31 | 622 | 15 | 604 | 9.72e-138 | 415 |
| MS.gene063145.t1 | MTR_4g070780 | 62.883 | 326 | 88 | 5 | 70 | 395 | 23 | 315 | 1.18e-133 | 397 |
| MS.gene063145.t1 | MTR_7g056587 | 42.970 | 505 | 244 | 11 | 128 | 623 | 1 | 470 | 6.19e-131 | 393 |
| MS.gene063145.t1 | MTR_5g012460 | 51.948 | 308 | 143 | 2 | 44 | 351 | 54 | 356 | 5.91e-110 | 338 |
| MS.gene063145.t1 | MTR_6g034285 | 58.586 | 99 | 41 | 0 | 146 | 244 | 195 | 293 | 1.52e-32 | 130 |
| MS.gene063145.t1 | MTR_3g060670 | 31.301 | 246 | 142 | 7 | 88 | 317 | 1 | 235 | 1.27e-19 | 91.3 |
| MS.gene063145.t1 | MTR_3g098530 | 31.163 | 215 | 129 | 6 | 107 | 320 | 66 | 262 | 4.46e-18 | 85.1 |
| MS.gene063145.t1 | MTR_2g027140 | 28.870 | 239 | 146 | 7 | 93 | 317 | 13 | 241 | 7.03e-18 | 85.5 |
| MS.gene063145.t1 | MTR_7g070480 | 26.557 | 305 | 194 | 10 | 32 | 326 | 26 | 310 | 6.60e-17 | 84.0 |
| MS.gene063145.t1 | MTR_8g096170 | 31.944 | 216 | 128 | 7 | 106 | 320 | 48 | 245 | 2.52e-16 | 79.7 |
| MS.gene063145.t1 | MTR_4g033435 | 30.180 | 222 | 129 | 9 | 110 | 320 | 271 | 477 | 2.98e-16 | 82.8 |
| MS.gene063145.t1 | MTR_8g095360 | 29.437 | 231 | 138 | 7 | 110 | 330 | 181 | 396 | 4.48e-16 | 81.6 |
| MS.gene063145.t1 | MTR_4g033435 | 29.952 | 207 | 120 | 8 | 110 | 306 | 271 | 462 | 1.28e-15 | 80.1 |
| MS.gene063145.t1 | MTR_4g013300 | 27.313 | 227 | 140 | 8 | 110 | 326 | 125 | 336 | 3.33e-15 | 79.0 |
| MS.gene063145.t1 | MTR_1g022185 | 30.986 | 213 | 121 | 9 | 113 | 320 | 48 | 239 | 2.40e-14 | 74.3 |
| MS.gene063145.t1 | MTR_1g032580 | 30.047 | 213 | 130 | 8 | 111 | 320 | 32 | 228 | 4.21e-13 | 70.1 |
| MS.gene063145.t1 | MTR_3g097350 | 28.829 | 222 | 133 | 8 | 110 | 320 | 249 | 456 | 2.04e-12 | 70.5 |
| MS.gene063145.t1 | MTR_2g027140 | 27.551 | 196 | 126 | 5 | 128 | 317 | 1 | 186 | 5.62e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063145.t1 | AT2G21520 | 74.720 | 625 | 145 | 5 | 1 | 617 | 1 | 620 | 0.0 | 951 |
| MS.gene063145.t1 | AT2G21520 | 74.086 | 629 | 146 | 6 | 1 | 617 | 1 | 624 | 0.0 | 942 |
| MS.gene063145.t1 | AT2G21520 | 74.086 | 629 | 146 | 6 | 1 | 617 | 1 | 624 | 0.0 | 942 |
| MS.gene063145.t1 | AT4G39170 | 73.576 | 632 | 140 | 8 | 1 | 623 | 1 | 614 | 0.0 | 934 |
| MS.gene063145.t1 | AT4G39170 | 73.418 | 632 | 139 | 9 | 1 | 623 | 1 | 612 | 0.0 | 928 |
| MS.gene063145.t1 | AT1G19650 | 58.889 | 630 | 230 | 10 | 1 | 623 | 1 | 608 | 0.0 | 701 |
| MS.gene063145.t1 | AT1G75370 | 58.202 | 634 | 232 | 12 | 1 | 623 | 1 | 612 | 0.0 | 679 |
| MS.gene063145.t1 | AT1G75370 | 57.771 | 637 | 233 | 12 | 1 | 623 | 1 | 615 | 0.0 | 676 |
| MS.gene063145.t1 | AT1G19650 | 58.935 | 526 | 193 | 7 | 105 | 623 | 27 | 536 | 0.0 | 597 |
| MS.gene063145.t1 | AT2G21540 | 51.269 | 591 | 220 | 10 | 23 | 609 | 11 | 537 | 0.0 | 584 |
| MS.gene063145.t1 | AT2G21540 | 51.269 | 591 | 220 | 10 | 23 | 609 | 11 | 537 | 0.0 | 584 |
| MS.gene063145.t1 | AT2G21540 | 51.269 | 591 | 220 | 10 | 23 | 609 | 11 | 537 | 0.0 | 584 |
| MS.gene063145.t1 | AT2G21540 | 51.269 | 591 | 220 | 10 | 23 | 609 | 11 | 537 | 0.0 | 584 |
| MS.gene063145.t1 | AT2G21540 | 50.931 | 591 | 216 | 10 | 23 | 609 | 11 | 531 | 0.0 | 582 |
| MS.gene063145.t1 | AT2G21540 | 50.931 | 591 | 216 | 10 | 23 | 609 | 11 | 531 | 0.0 | 582 |
| MS.gene063145.t1 | AT4G36490 | 53.380 | 577 | 214 | 11 | 35 | 609 | 8 | 531 | 0.0 | 573 |
| MS.gene063145.t1 | AT4G34580 | 50.251 | 597 | 229 | 10 | 24 | 609 | 3 | 542 | 0.0 | 563 |
| MS.gene063145.t1 | AT4G34580 | 50.251 | 597 | 229 | 10 | 24 | 609 | 3 | 542 | 0.0 | 563 |
| MS.gene063145.t1 | AT4G39180 | 50.085 | 591 | 232 | 13 | 23 | 609 | 11 | 542 | 0.0 | 555 |
| MS.gene063145.t1 | AT1G19650 | 65.783 | 415 | 134 | 5 | 1 | 415 | 1 | 407 | 0.0 | 547 |
| MS.gene063145.t1 | AT4G39180 | 73.214 | 336 | 86 | 3 | 23 | 357 | 11 | 343 | 0.0 | 535 |
| MS.gene063145.t1 | AT4G39180 | 73.214 | 336 | 86 | 3 | 23 | 357 | 11 | 343 | 0.0 | 535 |
| MS.gene063145.t1 | AT2G16380 | 46.891 | 595 | 253 | 10 | 26 | 615 | 5 | 541 | 1.89e-179 | 520 |
| MS.gene063145.t1 | AT2G16380 | 46.891 | 595 | 253 | 10 | 26 | 615 | 5 | 541 | 1.89e-179 | 520 |
| MS.gene063145.t1 | AT2G18180 | 74.684 | 316 | 72 | 4 | 37 | 351 | 14 | 322 | 1.17e-173 | 505 |
| MS.gene063145.t1 | AT2G18180 | 55.714 | 70 | 31 | 0 | 541 | 610 | 466 | 535 | 2.97e-16 | 82.8 |
| MS.gene063145.t1 | AT2G18180 | 74.684 | 316 | 72 | 4 | 37 | 351 | 14 | 322 | 1.21e-173 | 505 |
| MS.gene063145.t1 | AT2G18180 | 55.714 | 70 | 31 | 0 | 541 | 610 | 466 | 535 | 3.02e-16 | 82.8 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 266 | 13 | 29 | 623 | 22 | 568 | 1.23e-167 | 491 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 266 | 13 | 29 | 623 | 22 | 568 | 1.23e-167 | 491 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 266 | 13 | 29 | 623 | 22 | 568 | 1.23e-167 | 491 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 266 | 13 | 29 | 623 | 22 | 568 | 1.23e-167 | 491 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 267 | 13 | 29 | 623 | 22 | 569 | 1.80e-167 | 490 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 267 | 13 | 29 | 623 | 22 | 569 | 1.80e-167 | 490 |
| MS.gene063145.t1 | AT3G24840 | 46.000 | 600 | 267 | 13 | 29 | 623 | 22 | 569 | 1.80e-167 | 490 |
| MS.gene063145.t1 | AT1G55690 | 42.992 | 635 | 322 | 10 | 14 | 622 | 5 | 625 | 1.33e-158 | 469 |
| MS.gene063145.t1 | AT1G55690 | 42.992 | 635 | 322 | 10 | 14 | 622 | 5 | 625 | 1.33e-158 | 469 |
| MS.gene063145.t1 | AT1G55690 | 42.992 | 635 | 322 | 10 | 14 | 622 | 5 | 625 | 1.33e-158 | 469 |
| MS.gene063145.t1 | AT1G55690 | 42.992 | 635 | 322 | 10 | 14 | 622 | 5 | 625 | 1.33e-158 | 469 |
| MS.gene063145.t1 | AT1G55690 | 43.062 | 627 | 319 | 9 | 14 | 616 | 5 | 617 | 2.92e-157 | 466 |
| MS.gene063145.t1 | AT2G18180 | 80.083 | 241 | 48 | 0 | 111 | 351 | 11 | 251 | 2.04e-150 | 443 |
| MS.gene063145.t1 | AT2G18180 | 55.714 | 70 | 31 | 0 | 541 | 610 | 395 | 464 | 1.73e-16 | 83.2 |
| MS.gene063145.t1 | AT2G18180 | 80.417 | 240 | 47 | 0 | 112 | 351 | 12 | 251 | 2.10e-150 | 443 |
| MS.gene063145.t1 | AT2G18180 | 55.714 | 70 | 31 | 0 | 541 | 610 | 395 | 464 | 1.74e-16 | 83.2 |
| MS.gene063145.t1 | AT2G16380 | 46.138 | 492 | 205 | 8 | 128 | 615 | 1 | 436 | 1.12e-142 | 422 |
| MS.gene063145.t1 | AT2G18180 | 81.250 | 224 | 42 | 0 | 128 | 351 | 1 | 224 | 1.35e-141 | 419 |
| MS.gene063145.t1 | AT2G18180 | 55.714 | 70 | 31 | 0 | 541 | 610 | 368 | 437 | 1.42e-16 | 83.2 |
| MS.gene063145.t1 | AT5G56160 | 55.780 | 346 | 149 | 3 | 16 | 359 | 1 | 344 | 3.57e-135 | 404 |
| MS.gene063145.t1 | AT5G56160 | 55.780 | 346 | 149 | 3 | 16 | 359 | 1 | 344 | 2.11e-134 | 405 |
| MS.gene063145.t1 | AT5G56160 | 55.780 | 346 | 149 | 3 | 16 | 359 | 1 | 344 | 2.11e-134 | 405 |
| MS.gene063145.t1 | AT5G47510 | 50.775 | 258 | 127 | 0 | 86 | 343 | 27 | 284 | 5.34e-100 | 308 |
| MS.gene063145.t1 | AT5G47510 | 50.775 | 258 | 127 | 0 | 86 | 343 | 26 | 283 | 1.41e-99 | 308 |
| MS.gene063145.t1 | AT5G47510 | 50.775 | 258 | 127 | 0 | 86 | 343 | 27 | 284 | 1.49e-99 | 308 |
| MS.gene063145.t1 | AT5G47510 | 52.655 | 226 | 107 | 0 | 118 | 343 | 2 | 227 | 2.37e-91 | 285 |
| MS.gene063145.t1 | AT5G47730 | 27.984 | 243 | 156 | 6 | 86 | 317 | 7 | 241 | 1.62e-19 | 90.9 |
| MS.gene063145.t1 | AT5G47730 | 27.984 | 243 | 156 | 6 | 86 | 317 | 7 | 241 | 1.62e-19 | 90.9 |
| MS.gene063145.t1 | AT1G55840 | 29.098 | 244 | 145 | 6 | 97 | 328 | 19 | 246 | 4.38e-18 | 86.3 |
| MS.gene063145.t1 | AT1G55840 | 30.047 | 213 | 133 | 4 | 111 | 317 | 12 | 214 | 2.45e-17 | 83.6 |
| MS.gene063145.t1 | AT1G01630 | 31.604 | 212 | 126 | 7 | 110 | 320 | 52 | 245 | 9.46e-17 | 80.9 |
| MS.gene063145.t1 | AT1G72160 | 24.336 | 226 | 148 | 8 | 110 | 324 | 166 | 379 | 1.41e-15 | 80.1 |
| MS.gene063145.t1 | AT5G47730 | 27.604 | 192 | 131 | 3 | 128 | 317 | 1 | 186 | 4.28e-14 | 73.6 |
| MS.gene063145.t1 | AT5G47730 | 27.604 | 192 | 131 | 3 | 128 | 317 | 1 | 186 | 4.28e-14 | 73.6 |
| MS.gene063145.t1 | AT4G09160 | 24.638 | 276 | 179 | 8 | 65 | 324 | 267 | 529 | 3.19e-12 | 70.1 |
| MS.gene063145.t1 | AT4G09160 | 26.106 | 226 | 144 | 6 | 110 | 324 | 316 | 529 | 3.79e-12 | 69.7 |
| MS.gene063145.t1 | AT4G09160 | 26.106 | 226 | 144 | 6 | 110 | 324 | 341 | 554 | 4.32e-12 | 69.7 |
| MS.gene063145.t1 | AT3G51670 | 25.000 | 236 | 149 | 9 | 110 | 337 | 84 | 299 | 1.49e-11 | 67.4 |
Find 141 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATGACCTTCAATATTTC+AGG | 0.179559 | 3.4:+99574864 | None:intergenic |
| GAATAGCTCTTCATTGCTTT+TGG | 0.251350 | 3.4:+99574481 | None:intergenic |
| CTCGCAACTTGGCTTCTTCC+TGG | 0.254873 | 3.4:+99572849 | None:intergenic |
| CAGAGGTCTCACACCTTAAA+AGG | 0.255250 | 3.4:-99574053 | MS.gene063145:intron |
| ACCCGAGCTTTAACTCCTTC+TGG | 0.274076 | 3.4:+99573515 | None:intergenic |
| GGAAACATTACTTAGGTTCT+TGG | 0.276758 | 3.4:-99575102 | MS.gene063145:intron |
| ACTCTCACCGAACAGGTAAA+AGG | 0.336501 | 3.4:-99574556 | MS.gene063145:intron |
| AGAGTTAATTGCTACTAAAA+AGG | 0.344700 | 3.4:-99573171 | MS.gene063145:intron |
| ATGGCCCTTTATCAGATCTA+AGG | 0.345070 | 3.4:+99574895 | None:intergenic |
| CTGACTTTGTAAAATTCTTA+AGG | 0.347694 | 3.4:+99575531 | None:intergenic |
| GATACATCTACTGCCGAATC+AGG | 0.348018 | 3.4:-99574529 | MS.gene063145:CDS |
| AAGGAGTTAAAGCTCGGGTT+TGG | 0.349644 | 3.4:-99573511 | MS.gene063145:CDS |
| CAGGTACCTCCGAGAAATTC+CGG | 0.352903 | 3.4:+99574942 | None:intergenic |
| GGAAGTTATGCTAACATGTC+TGG | 0.353390 | 3.4:-99574143 | MS.gene063145:CDS |
| CACGAACAGGGGTCAGTCTA+AGG | 0.356073 | 3.4:+99574455 | None:intergenic |
| CCAAGTCTTTCAATATAAAC+AGG | 0.360352 | 3.4:+99575825 | None:intergenic |
| CTCTTCCATTCAGCATCAAC+AGG | 0.363635 | 3.4:+99574089 | None:intergenic |
| GTCTGTGCTTGGCTTGTTGA+AGG | 0.374114 | 3.4:+99573341 | None:intergenic |
| CACTTAATGTAGTGAGTTGC+CGG | 0.379771 | 3.4:-99574961 | MS.gene063145:intron |
| TGGTAATCATCAAAAGCTTC+AGG | 0.385856 | 3.4:+99576337 | None:intergenic |
| ACTGATGCAGGTTACAACTA+TGG | 0.387260 | 3.4:-99575784 | MS.gene063145:CDS |
| TGTTGAATGCTGCGGTCTGC+CGG | 0.390645 | 3.4:-99573211 | MS.gene063145:CDS |
| CTACAATGGAGAAGGGAGTT+TGG | 0.395043 | 3.4:-99576149 | MS.gene063145:CDS |
| GGATGCCTTAGATCTGATAA+AGG | 0.399200 | 3.4:-99574900 | MS.gene063145:CDS |
| CGGCATTTATGATAAACATT+TGG | 0.399702 | 3.4:+99575275 | None:intergenic |
| CCTGTTTATATTGAAAGACT+TGG | 0.404931 | 3.4:-99575825 | MS.gene063145:CDS |
| GATGAAAGGAGAACCAGAAT+TGG | 0.406535 | 3.4:-99576541 | MS.gene063145:CDS |
| AGACTTACTTCCTCACGAAC+AGG | 0.409545 | 3.4:+99574442 | None:intergenic |
| TTCAGCTTCTGACCCTGATT+CGG | 0.410951 | 3.4:+99574516 | None:intergenic |
| GGTCTGCCGGGTGGATGCTT+TGG | 0.413892 | 3.4:-99573198 | MS.gene063145:CDS |
| CCCTCCTTGCTGAAAAGGTT+AGG | 0.416929 | 3.4:-99573302 | MS.gene063145:CDS |
| TCTTTCCCTCCTTGCTGAAA+AGG | 0.421998 | 3.4:-99573307 | MS.gene063145:CDS |
| CAACTCCCTCCTACAATGTC+TGG | 0.427157 | 3.4:-99576739 | None:intergenic |
| ATGATTACCATATGATGTTA+AGG | 0.431353 | 3.4:-99576324 | MS.gene063145:intron |
| TTAACTTACGTGGATCTTTG+AGG | 0.437733 | 3.4:+99575195 | None:intergenic |
| TGATATTGCAGGAAGTTTGT+TGG | 0.441337 | 3.4:+99573424 | None:intergenic |
| AGCTCGGGTTTGGGTAGCCC+TGG | 0.441503 | 3.4:-99573501 | MS.gene063145:CDS |
| ATGAGCACCTTAACATCATA+TGG | 0.441586 | 3.4:+99576317 | None:intergenic |
| AGTGAGTTGCCGGAATTTCT+CGG | 0.443277 | 3.4:-99574951 | MS.gene063145:CDS |
| AGGAGTTAAAGCTCGGGTTT+GGG | 0.448011 | 3.4:-99573510 | MS.gene063145:CDS |
| GTAACCTGCATCAGTTTGTT+CGG | 0.450895 | 3.4:+99575792 | None:intergenic |
| TTGAGAATTCAGAAGATGAA+AGG | 0.452181 | 3.4:-99576555 | MS.gene063145:CDS |
| CTCCACAACAGTCTAAATCC+AGG | 0.459305 | 3.4:+99575250 | None:intergenic |
| TTTATCATAAATGCCGGCCC+TGG | 0.461240 | 3.4:-99575268 | MS.gene063145:CDS |
| GTTAGGTGAGCTTGAAGAGA+AGG | 0.464549 | 3.4:-99573285 | MS.gene063145:CDS |
| TCATCATTAGATGATATTGC+AGG | 0.467092 | 3.4:+99573413 | None:intergenic |
| TGTTAGCTCTGTTTCTATTG+AGG | 0.470702 | 3.4:-99576431 | MS.gene063145:CDS |
| TCTCAATGGCGAACCACGGC+GGG | 0.475604 | 3.4:-99574757 | MS.gene063145:CDS |
| TCTAAGAGAATGCTTAAACT+TGG | 0.481804 | 3.4:+99576486 | None:intergenic |
| AAGGTCTAGCGAAACGATCA+AGG | 0.486798 | 3.4:+99576713 | None:intergenic |
| ATGTTTGTTGTCTCGAGAGT+TGG | 0.489587 | 3.4:+99573374 | None:intergenic |
| AACAATTCCGCCTTCTCGTA+AGG | 0.494601 | 3.4:+99573230 | None:intergenic |
| TTTGTAGATTTCTGAAAGCA+AGG | 0.495319 | 3.4:-99576214 | MS.gene063145:intron |
| ATGCCAACTTACTCGCAACT+TGG | 0.496679 | 3.4:+99572838 | None:intergenic |
| ACCACAATCTTAGATGTTCA+AGG | 0.499904 | 3.4:-99575663 | MS.gene063145:CDS |
| ATTTGTCAGGCTAAGATAGC+AGG | 0.500992 | 3.4:-99574170 | MS.gene063145:intron |
| AGCAAATAACATCAGGAAGA+AGG | 0.501851 | 3.4:+99573475 | None:intergenic |
| ACATCAGGAAGAAGGCAGCC+AGG | 0.503548 | 3.4:+99573483 | None:intergenic |
| TCAACAGGTTTGTCTACCAT+TGG | 0.504730 | 3.4:+99574104 | None:intergenic |
| TTCTCGTAAGGCATTTCAGA+TGG | 0.509154 | 3.4:+99573242 | None:intergenic |
| CTCCAGAAGGAGTTAAAGCT+CGG | 0.512546 | 3.4:-99573517 | MS.gene063145:CDS |
| GCAACCGCTGAATGAGTTCA+CGG | 0.514132 | 3.4:+99575507 | None:intergenic |
| GGAAAAGAGCAAATAACATC+AGG | 0.514810 | 3.4:+99573468 | None:intergenic |
| TATTACCCACATGGCCATCA+TGG | 0.515918 | 3.4:-99575867 | MS.gene063145:CDS |
| TACTTGAAGTAATTGATGCC+AGG | 0.527444 | 3.4:-99575059 | MS.gene063145:intron |
| CAGGAAGTTTGTTGGTCATG+CGG | 0.529886 | 3.4:+99573432 | None:intergenic |
| ACAAACCTGTTGATGCTGAA+TGG | 0.529895 | 3.4:-99574094 | MS.gene063145:CDS |
| AGTGGTAGGAGAAAGAGTGA+TGG | 0.530434 | 3.4:-99576457 | MS.gene063145:CDS |
| CTTCCTTGTCTACACCATGA+TGG | 0.535434 | 3.4:+99575853 | None:intergenic |
| GTTGAATGCTGCGGTCTGCC+GGG | 0.538487 | 3.4:-99573210 | MS.gene063145:CDS |
| TGAGGATGTTAGAGATGTTG+AGG | 0.541292 | 3.4:-99576413 | MS.gene063145:CDS |
| CTCTCTACGAAGCGTTAATG+AGG | 0.542826 | 3.4:-99572901 | MS.gene063145:CDS |
| TCATGCGGCAAGCAACTTGA+CGG | 0.543728 | 3.4:+99573447 | None:intergenic |
| TCCCTCGTCTGCACAAGAGC+AGG | 0.544804 | 3.4:+99574923 | None:intergenic |
| CTGACATGCTACAATGGAGA+AGG | 0.546074 | 3.4:-99576157 | MS.gene063145:CDS |
| TGGTGCTGACACCATTATGC+AGG | 0.547549 | 3.4:-99576129 | MS.gene063145:intron |
| CTCTTAGAAAGAAGAGTGGT+AGG | 0.547857 | 3.4:-99576471 | MS.gene063145:CDS |
| GATGCCTTAGATCTGATAAA+GGG | 0.549117 | 3.4:-99574899 | MS.gene063145:CDS |
| ATCTGAAATGCCTTACGAGA+AGG | 0.553009 | 3.4:-99573240 | MS.gene063145:CDS |
| CAGGCTAAGATAGCAGGAAA+GGG | 0.556007 | 3.4:-99574164 | MS.gene063145:CDS |
| TGATCCGAACAAACTGATGC+AGG | 0.556119 | 3.4:-99575796 | MS.gene063145:CDS |
| GAAGTTATGCTAACATGTCT+GGG | 0.556151 | 3.4:-99574142 | MS.gene063145:CDS |
| GCCCTGGATTTAGACTGTTG+TGG | 0.562110 | 3.4:-99575252 | MS.gene063145:CDS |
| TCAGGCTAAGATAGCAGGAA+AGG | 0.562842 | 3.4:-99574165 | MS.gene063145:intron |
| TACCTGCTCTTGTGCAGACG+AGG | 0.562861 | 3.4:-99574925 | MS.gene063145:CDS |
| AGGATCAAGAAAAGACTTGA+CGG | 0.565906 | 3.4:+99575225 | None:intergenic |
| CATCAGGAAGAAGGCAGCCA+GGG | 0.566468 | 3.4:+99573484 | None:intergenic |
| CAAATGTTTATCATAAATGC+CGG | 0.567049 | 3.4:-99575274 | MS.gene063145:CDS |
| GTAAAGGTTCTCAACAGTGA+AGG | 0.571005 | 3.4:-99574723 | MS.gene063145:CDS |
| GCTTGCTTACATAGACCGCC+AGG | 0.573707 | 3.4:-99572867 | MS.gene063145:CDS |
| TCCAGAAGGAGTTAAAGCTC+GGG | 0.574655 | 3.4:-99573516 | MS.gene063145:CDS |
| GGTTCTCAACAGTGAAGGGA+AGG | 0.575465 | 3.4:-99574718 | MS.gene063145:CDS |
| GACTTACTTCCTCACGAACA+GGG | 0.576560 | 3.4:+99574443 | None:intergenic |
| TAAAGGTTCTCAACAGTGAA+GGG | 0.579543 | 3.4:-99574722 | MS.gene063145:CDS |
| CAACAGTCTAAATCCAGGGC+CGG | 0.582978 | 3.4:+99575255 | None:intergenic |
| CTGTTGATGCTGAATGGAAG+AGG | 0.584003 | 3.4:-99574088 | MS.gene063145:CDS |
| AGGTCTAGCGAAACGATCAA+GGG | 0.584638 | 3.4:+99576714 | None:intergenic |
| CTTGCACTATTGCTGCAAAG+AGG | 0.584915 | 3.4:-99575701 | MS.gene063145:CDS |
| AACATACAAAACACTCCAGA+AGG | 0.585254 | 3.4:-99573530 | MS.gene063145:CDS |
| CAACCGCTGAATGAGTTCAC+GGG | 0.585454 | 3.4:+99575508 | None:intergenic |
| TTAGATCTGATAAAGGGCCA+TGG | 0.586575 | 3.4:-99574893 | MS.gene063145:CDS |
| ACTCATTCAGCGGTTGCAGA+AGG | 0.587086 | 3.4:-99575501 | MS.gene063145:CDS |
| AGAGTTACCATTGGGTATCG+TGG | 0.589722 | 3.4:+99574678 | None:intergenic |
| ATACATCTACTGCCGAATCA+GGG | 0.600440 | 3.4:-99574528 | MS.gene063145:CDS |
| GCGGGCAAGACAAGTAGTAA+AGG | 0.600575 | 3.4:-99574739 | MS.gene063145:CDS |
| ACTACTTGTCTTGCCCGCCG+TGG | 0.608753 | 3.4:+99574744 | None:intergenic |
| AACTCTCGAGACAACAAACA+TGG | 0.609861 | 3.4:-99573372 | MS.gene063145:CDS |
| CAGCGGTTGCAGAAGGTCGA+CGG | 0.610486 | 3.4:-99575494 | MS.gene063145:CDS |
| TTTGCAGCAATAGTGCAAGC+AGG | 0.612016 | 3.4:+99575705 | None:intergenic |
| TCCTTGAACATCTAAGATTG+TGG | 0.621262 | 3.4:+99575662 | None:intergenic |
| TGCTCTTGTGCAGACGAGGG+AGG | 0.624988 | 3.4:-99574921 | MS.gene063145:CDS |
| TAGACTGACCCCTGTTCGTG+AGG | 0.627244 | 3.4:-99574452 | MS.gene063145:CDS |
| ATGGTGTAGACAAGGAAGGA+AGG | 0.628721 | 3.4:-99575848 | MS.gene063145:CDS |
| AATCTTAGATGTTCAAGGAG+TGG | 0.629525 | 3.4:-99575658 | MS.gene063145:intron |
| TGCGAAGCCACGATACCCAA+TGG | 0.631200 | 3.4:-99574685 | MS.gene063145:intron |
| TGTGGGCTGACATGCTACAA+TGG | 0.633693 | 3.4:-99576163 | MS.gene063145:CDS |
| GGCGGAATTGTTGAATGCTG+CGG | 0.635995 | 3.4:-99573219 | MS.gene063145:CDS |
| TGGCCATCATGGTGTAGACA+AGG | 0.641499 | 3.4:-99575856 | MS.gene063145:CDS |
| TGACATGCTACAATGGAGAA+GGG | 0.642619 | 3.4:-99576156 | MS.gene063145:CDS |
| CATTCTCTTAGAAAGAAGAG+TGG | 0.644440 | 3.4:-99576475 | MS.gene063145:CDS |
| TCCACAACAGTCTAAATCCA+GGG | 0.645024 | 3.4:+99575251 | None:intergenic |
| ATTTCTCAAACTCTTGCACA+TGG | 0.647962 | 3.4:+99575745 | None:intergenic |
| CATCATGGTGTAGACAAGGA+AGG | 0.648295 | 3.4:-99575852 | MS.gene063145:CDS |
| ACCTGCTCTTGTGCAGACGA+GGG | 0.649120 | 3.4:-99574924 | MS.gene063145:CDS |
| GTATGATGAATATGTTCCAA+TGG | 0.652365 | 3.4:-99574120 | MS.gene063145:CDS |
| AACAAGCCAAGCACAGACAG+AGG | 0.652528 | 3.4:-99573336 | MS.gene063145:CDS |
| CTGCTTCCAAAGCATCCACC+CGG | 0.654601 | 3.4:+99573192 | None:intergenic |
| TGAAATGCCTTACGAGAAGG+CGG | 0.658641 | 3.4:-99573237 | MS.gene063145:CDS |
| TCTACACCATGATGGCCATG+TGG | 0.666431 | 3.4:+99575861 | None:intergenic |
| GCAACTTGGCTTCTTCCTGG+CGG | 0.667045 | 3.4:+99572852 | None:intergenic |
| TTCTCAATGGCGAACCACGG+CGG | 0.670535 | 3.4:-99574758 | MS.gene063145:CDS |
| TGGTTCTCAATGGCGAACCA+CGG | 0.670544 | 3.4:-99574761 | MS.gene063145:CDS |
| GAATGCTGCGGTCTGCCGGG+TGG | 0.679946 | 3.4:-99573207 | MS.gene063145:CDS |
| ACTTACTTCCTCACGAACAG+GGG | 0.681063 | 3.4:+99574444 | None:intergenic |
| CAGCCCGTGAACTCATTCAG+CGG | 0.691924 | 3.4:-99575511 | MS.gene063145:CDS |
| GGTCTAGCGAAACGATCAAG+GGG | 0.694371 | 3.4:+99576715 | None:intergenic |
| CTACACCATGATGGCCATGT+GGG | 0.701290 | 3.4:+99575862 | None:intergenic |
| AGAGGCAAACATCTCTACAG+AGG | 0.704526 | 3.4:-99574070 | MS.gene063145:CDS |
| GTTGTGAAGTATTACCCACA+TGG | 0.705174 | 3.4:-99575876 | MS.gene063145:CDS |
| GAGTTGCCGGAATTTCTCGG+AGG | 0.755589 | 3.4:-99574948 | MS.gene063145:CDS |
| CGACGGTGACAATTACCCCG+AGG | 0.764728 | 3.4:-99575477 | MS.gene063145:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTGTGTTTAATTATTAT+TGG | - | chr3.4:99573208-99573227 | MS.gene063145:CDS | 10.0% |
| !! | AAATAAGAAGATTCATTAAA+AGG | + | chr3.4:99575458-99575477 | None:intergenic | 15.0% |
| !! | AATAAGAAGATTCATTAAAA+GGG | + | chr3.4:99575457-99575476 | None:intergenic | 15.0% |
| !!! | TAAAATGCATATAGAATTTT+GGG | - | chr3.4:99573349-99573368 | MS.gene063145:CDS | 15.0% |
| !!! | TATTTTGTTAATTATGACAT+AGG | - | chr3.4:99575531-99575550 | MS.gene063145:CDS | 15.0% |
| !!! | TTTTTATGAATCAATTTTCA+GGG | - | chr3.4:99573901-99573920 | MS.gene063145:intron | 15.0% |
| !!! | TTTTTTATGAATCAATTTTC+AGG | - | chr3.4:99573900-99573919 | MS.gene063145:intron | 15.0% |
| !! | AAAAAACAAAACATTAGGTA+AGG | + | chr3.4:99573525-99573544 | None:intergenic | 20.0% |
| !! | ATAATAATAACTAATCTGAC+AGG | - | chr3.4:99575072-99575091 | MS.gene063145:CDS | 20.0% |
| !! | TAAATAGCAATTTGTAGAAT+AGG | + | chr3.4:99575042-99575061 | None:intergenic | 20.0% |
| !! | TCAATAGAAAAGAAAAATCA+TGG | + | chr3.4:99574434-99574453 | None:intergenic | 20.0% |
| !! | TTTGCATGTAAATTTCAAAA+AGG | - | chr3.4:99575721-99575740 | MS.gene063145:CDS | 20.0% |
| !!! | ACTTAAAGCTTTCTTTTTTA+AGG | + | chr3.4:99572942-99572961 | None:intergenic | 20.0% |
| !!! | GTAAAATGCATATAGAATTT+TGG | - | chr3.4:99573348-99573367 | MS.gene063145:CDS | 20.0% |
| !!! | TTGAATTTGTTCAATTTTTC+AGG | - | chr3.4:99572827-99572846 | MS.gene063145:intron | 20.0% |
| ! | AATTGAATGATTTCAAACCT+TGG | + | chr3.4:99573864-99573883 | None:intergenic | 25.0% |
| ! | AGAGTTAATTGCTACTAAAA+AGG | - | chr3.4:99576284-99576303 | MS.gene063145:intron | 25.0% |
| ! | ATCCAGAAAAATCAAATGTT+AGG | + | chr3.4:99576524-99576543 | None:intergenic | 25.0% |
| ! | ATGATTACCATATGATGTTA+AGG | - | chr3.4:99573131-99573150 | MS.gene063145:intron | 25.0% |
| ! | ATTTACATGCAAATGAAATC+CGG | + | chr3.4:99575714-99575733 | None:intergenic | 25.0% |
| ! | CAAATGTTTATCATAAATGC+CGG | - | chr3.4:99574181-99574200 | MS.gene063145:intron | 25.0% |
| ! | CTGACTTTGTAAAATTCTTA+AGG | + | chr3.4:99573927-99573946 | None:intergenic | 25.0% |
| ! | GAAAAATCCTGAAATATTGA+AGG | - | chr3.4:99574584-99574603 | MS.gene063145:intron | 25.0% |
| ! | GATGCAAAAAACAAAACATT+AGG | + | chr3.4:99573530-99573549 | None:intergenic | 25.0% |
| ! | TCCAGAAAAATCAAATGTTA+GGG | + | chr3.4:99576523-99576542 | None:intergenic | 25.0% |
| ! | TTAATTGCTACTAAAAAGGT+AGG | - | chr3.4:99576288-99576307 | MS.gene063145:intron | 25.0% |
| ! | TTGAAGATAGTAAGAATAAG+AGG | + | chr3.4:99576398-99576417 | None:intergenic | 25.0% |
| ! | TTTCTGATGGTTAAATAACA+TGG | - | chr3.4:99573395-99573414 | MS.gene063145:CDS | 25.0% |
| !! | AATATTTCAGGATTTTTCCA+TGG | + | chr3.4:99574582-99574601 | None:intergenic | 25.0% |
| !! | AATTTAAAACAGCTAGAAGA+TGG | + | chr3.4:99574289-99574308 | None:intergenic | 25.0% |
| !! | GAACAAGATATAGACTTTTA+GGG | - | chr3.4:99573417-99573436 | MS.gene063145:CDS | 25.0% |
| !! | TAGAACTATTTTGTCCAATT+GGG | + | chr3.4:99575502-99575521 | None:intergenic | 25.0% |
| !! | TAGCAAAGCTAACATTTTAA+AGG | - | chr3.4:99576651-99576670 | MS.gene063145:intron | 25.0% |
| !! | TATGTTTAGATGGATGATTT+TGG | - | chr3.4:99573440-99573459 | MS.gene063145:CDS | 25.0% |
| !!! | AATGTTTTGTTTTTTGCATC+AGG | - | chr3.4:99573530-99573549 | MS.gene063145:CDS | 25.0% |
| !!! | CTTTTTTACAAGTCAAAGAA+TGG | + | chr3.4:99575779-99575798 | None:intergenic | 25.0% |
| !!! | TTCAATTTTTCAGGTTTTGA+GGG | - | chr3.4:99572836-99572855 | MS.gene063145:intron | 25.0% |
| AAAAAACAGTAATCACACTG+TGG | + | chr3.4:99574138-99574157 | None:intergenic | 30.0% | |
| AAAAACAGTAATCACACTGT+GGG | + | chr3.4:99574137-99574156 | None:intergenic | 30.0% | |
| AAAGAGAAAATTCTCTGAAC+AGG | + | chr3.4:99575230-99575249 | None:intergenic | 30.0% | |
| ACATAGTGAAAAAAAGACCT+TGG | - | chr3.4:99575129-99575148 | MS.gene063145:intron | 30.0% | |
| ATGCAAAATTGAGGTTGTAA+TGG | + | chr3.4:99575595-99575614 | None:intergenic | 30.0% | |
| CAATATTTGGAGATATTGTG+AGG | - | chr3.4:99575172-99575191 | MS.gene063145:intron | 30.0% | |
| CACAATATCTCCAAATATTG+TGG | + | chr3.4:99575172-99575191 | None:intergenic | 30.0% | |
| CATATGACCTTCAATATTTC+AGG | + | chr3.4:99574594-99574613 | None:intergenic | 30.0% | |
| CCAAGTCTTTCAATATAAAC+AGG | + | chr3.4:99573633-99573652 | None:intergenic | 30.0% | |
| CCTGTTTATATTGAAAGACT+TGG | - | chr3.4:99573630-99573649 | MS.gene063145:intron | 30.0% | |
| CGGCATTTATGATAAACATT+TGG | + | chr3.4:99574183-99574202 | None:intergenic | 30.0% | |
| GTATGATGAATATGTTCCAA+TGG | - | chr3.4:99575335-99575354 | MS.gene063145:intron | 30.0% | |
| TAAGGCAATCAATTACTTCA+GGG | + | chr3.4:99573507-99573526 | None:intergenic | 30.0% | |
| TCACTAAAATTTCACCCAAT+TGG | - | chr3.4:99575485-99575504 | MS.gene063145:CDS | 30.0% | |
| TCATCATTAGATGATATTGC+AGG | + | chr3.4:99576045-99576064 | None:intergenic | 30.0% | |
| TCTAAGAGAATGCTTAAACT+TGG | + | chr3.4:99572972-99572991 | None:intergenic | 30.0% | |
| TGAAAAAGCAAAGCATATGT+GGG | - | chr3.4:99573275-99573294 | MS.gene063145:CDS | 30.0% | |
| TGGATCATTCATATAGTATC+CGG | - | chr3.4:99575692-99575711 | MS.gene063145:CDS | 30.0% | |
| TTCTCCAGCAAAAGTTTAAT+CGG | - | chr3.4:99575872-99575891 | MS.gene063145:CDS | 30.0% | |
| TTGAAAAAGCAAAGCATATG+TGG | - | chr3.4:99573274-99573293 | MS.gene063145:CDS | 30.0% | |
| TTGAGAATTCAGAAGATGAA+AGG | - | chr3.4:99572900-99572919 | MS.gene063145:CDS | 30.0% | |
| TTTAATCGGATTTCCAATAC+AGG | - | chr3.4:99575886-99575905 | MS.gene063145:CDS | 30.0% | |
| ! | AAAAAAGAGTTCGAGCTTTT+AGG | - | chr3.4:99575792-99575811 | MS.gene063145:CDS | 30.0% |
| ! | AAATATGTGAAGCACCAAAT+TGG | + | chr3.4:99574837-99574856 | None:intergenic | 30.0% |
| ! | AAATCCGATTAAACTTTTGC+TGG | + | chr3.4:99575879-99575898 | None:intergenic | 30.0% |
| ! | AGTGTGATATAACTAGGTTT+TGG | - | chr3.4:99574092-99574111 | MS.gene063145:CDS | 30.0% |
| ! | ATATTGTGCTATAGCCTTTT+TGG | - | chr3.4:99575639-99575658 | MS.gene063145:intron | 30.0% |
| ! | GGAACAAGATATAGACTTTT+AGG | - | chr3.4:99573416-99573435 | MS.gene063145:CDS | 30.0% |
| ! | GTAGAACTATTTTGTCCAAT+TGG | + | chr3.4:99575503-99575522 | None:intergenic | 30.0% |
| ! | TATGCATTTTACCTGCATAA+TGG | + | chr3.4:99573340-99573359 | None:intergenic | 30.0% |
| ! | TATTGTGCTATAGCCTTTTT+GGG | - | chr3.4:99575640-99575659 | MS.gene063145:intron | 30.0% |
| ! | TTCAAAAAGGCTTTTGATGA+GGG | - | chr3.4:99575734-99575753 | MS.gene063145:CDS | 30.0% |
| ! | TTCACATTCTGTTATTTGTC+AGG | - | chr3.4:99575272-99575291 | MS.gene063145:CDS | 30.0% |
| ! | TTTAGATGGATGATTTTGGA+GGG | - | chr3.4:99573444-99573463 | MS.gene063145:CDS | 30.0% |
| ! | TTTCAAAAAGGCTTTTGATG+AGG | - | chr3.4:99575733-99575752 | MS.gene063145:CDS | 30.0% |
| ! | TTTGTAGATTTCTGAAAGCA+AGG | - | chr3.4:99573241-99573260 | MS.gene063145:CDS | 30.0% |
| ! | TTTTTGTAGATGGTTCTCAA+TGG | - | chr3.4:99574684-99574703 | MS.gene063145:intron | 30.0% |
| !! | AAATTGAAGAGGTACTTACA+AGG | + | chr3.4:99572764-99572783 | None:intergenic | 30.0% |
| !! | GTGTTTACACTTTTTGTAGA+TGG | - | chr3.4:99574674-99574693 | MS.gene063145:intron | 30.0% |
| !!! | ACTTTTAGGGTATGTTTAGA+TGG | - | chr3.4:99573430-99573449 | MS.gene063145:CDS | 30.0% |
| !!! | CTTTTTTAAGGATCCAATTC+TGG | + | chr3.4:99572930-99572949 | None:intergenic | 30.0% |
| !!! | GTTCAATTTTTCAGGTTTTG+AGG | - | chr3.4:99572835-99572854 | MS.gene063145:intron | 30.0% |
| !!! | TCAATTTTTCAGGTTTTGAG+GGG | - | chr3.4:99572837-99572856 | MS.gene063145:intron | 30.0% |
| AAATTGAGGTTGTAATGGTG+TGG | + | chr3.4:99575590-99575609 | None:intergenic | 35.0% | |
| AACATACAAAACACTCCAGA+AGG | - | chr3.4:99575925-99575944 | MS.gene063145:intron | 35.0% | |
| AACCTAGTTATATCACACTG+TGG | + | chr3.4:99574091-99574110 | None:intergenic | 35.0% | |
| AATCTTAGATGTTCAAGGAG+TGG | - | chr3.4:99573797-99573816 | MS.gene063145:intron | 35.0% | |
| AATTGATGCCAGGTACATTA+TGG | - | chr3.4:99574406-99574425 | MS.gene063145:intron | 35.0% | |
| ACATCAAGAAAGCGAAGTAA+TGG | - | chr3.4:99576329-99576348 | MS.gene063145:CDS | 35.0% | |
| ACCACAATCTTAGATGTTCA+AGG | - | chr3.4:99573792-99573811 | MS.gene063145:intron | 35.0% | |
| ACCTAGTTATATCACACTGT+GGG | + | chr3.4:99574090-99574109 | None:intergenic | 35.0% | |
| AGCAAATAACATCAGGAAGA+AGG | + | chr3.4:99575983-99576002 | None:intergenic | 35.0% | |
| AGGATCAAGAAAAGACTTGA+CGG | + | chr3.4:99574233-99574252 | None:intergenic | 35.0% | |
| ATGAGCACCTTAACATCATA+TGG | + | chr3.4:99573141-99573160 | None:intergenic | 35.0% | |
| ATTTCTCAAACTCTTGCACA+TGG | + | chr3.4:99573713-99573732 | None:intergenic | 35.0% | |
| CATTCTCTTAGAAAGAAGAG+TGG | - | chr3.4:99572980-99572999 | MS.gene063145:intron | 35.0% | |
| CTTGGTTGGAAACATTACTT+AGG | - | chr3.4:99574346-99574365 | MS.gene063145:intron | 35.0% | |
| GAAGTTATGCTAACATGTCT+GGG | - | chr3.4:99575313-99575332 | MS.gene063145:intron | 35.0% | |
| GATGCCTTAGATCTGATAAA+GGG | - | chr3.4:99574556-99574575 | MS.gene063145:intron | 35.0% | |
| GCGAGAATTGAAAATTGAAG+AGG | + | chr3.4:99572775-99572794 | None:intergenic | 35.0% | |
| GGAAAAGAGCAAATAACATC+AGG | + | chr3.4:99575990-99576009 | None:intergenic | 35.0% | |
| GGAAACATTACTTAGGTTCT+TGG | - | chr3.4:99574353-99574372 | MS.gene063145:intron | 35.0% | |
| GTAAGGCAATCAATTACTTC+AGG | + | chr3.4:99573508-99573527 | None:intergenic | 35.0% | |
| TAAAGGTTCTCAACAGTGAA+GGG | - | chr3.4:99574733-99574752 | MS.gene063145:CDS | 35.0% | |
| TAATGTTTCCAACCAAGCAT+CGG | + | chr3.4:99574343-99574362 | None:intergenic | 35.0% | |
| TACTTGAAGTAATTGATGCC+AGG | - | chr3.4:99574396-99574415 | MS.gene063145:intron | 35.0% | |
| TGAAGGTCATATGCTATTCT+TGG | - | chr3.4:99574601-99574620 | MS.gene063145:intron | 35.0% | |
| TGATATTGCAGGAAGTTTGT+TGG | + | chr3.4:99576034-99576053 | None:intergenic | 35.0% | |
| TGATTGTTGCCTTAATCAAG+TGG | - | chr3.4:99574809-99574828 | MS.gene063145:intron | 35.0% | |
| TGGTAATCATCAAAAGCTTC+AGG | + | chr3.4:99573121-99573140 | None:intergenic | 35.0% | |
| TTAACTTACGTGGATCTTTG+AGG | + | chr3.4:99574263-99574282 | None:intergenic | 35.0% | |
| TTAATCAAGTGGAGCCAATT+TGG | - | chr3.4:99574820-99574839 | MS.gene063145:intron | 35.0% | |
| TTGTTGCAGTCCACAATATT+TGG | - | chr3.4:99575159-99575178 | MS.gene063145:intron | 35.0% | |
| ! | AAATTGGCTCCACTTGATTA+AGG | + | chr3.4:99574821-99574840 | None:intergenic | 35.0% |
| ! | AAGATGGCATTTAACTTACG+TGG | + | chr3.4:99574273-99574292 | None:intergenic | 35.0% |
| ! | ATTGTGCTATAGCCTTTTTG+GGG | - | chr3.4:99575641-99575660 | MS.gene063145:intron | 35.0% |
| ! | CGTTTGGTTTATGTTTCTGA+TGG | - | chr3.4:99573382-99573401 | MS.gene063145:CDS | 35.0% |
| ! | GAATAGCTCTTCATTGCTTT+TGG | + | chr3.4:99574977-99574996 | None:intergenic | 35.0% |
| ! | GATTTTTCTGGATTGTGCAT+AGG | - | chr3.4:99576531-99576550 | MS.gene063145:CDS | 35.0% |
| ! | GCTTCACATATTTTTCTCAG+TGG | - | chr3.4:99574844-99574863 | MS.gene063145:intron | 35.0% |
| ! | GTGTTTTGTATGTTAGGAAG+AGG | + | chr3.4:99575919-99575938 | None:intergenic | 35.0% |
| ! | GTTTAGATGGATGATTTTGG+AGG | - | chr3.4:99573443-99573462 | MS.gene063145:CDS | 35.0% |
| ! | TCAAAAAGGCTTTTGATGAG+GGG | - | chr3.4:99575735-99575754 | MS.gene063145:CDS | 35.0% |
| ! | TCCTTGAACATCTAAGATTG+TGG | + | chr3.4:99573796-99573815 | None:intergenic | 35.0% |
| ! | TTTTCGTCAGTCTTTGATCA+TGG | - | chr3.4:99573084-99573103 | MS.gene063145:intron | 35.0% |
| ! | TTTTTGAACGCTACGTAACT+AGG | - | chr3.4:99574039-99574058 | MS.gene063145:intron | 35.0% |
| !! | CCTAGATTTGTTACCAAAGA+CGG | - | chr3.4:99576496-99576515 | MS.gene063145:CDS | 35.0% |
| !! | CTAGATTTGTTACCAAAGAC+GGG | - | chr3.4:99576497-99576516 | MS.gene063145:CDS | 35.0% |
| !! | GCCCTAACATTTGATTTTTC+TGG | - | chr3.4:99576519-99576538 | MS.gene063145:CDS | 35.0% |
| !! | TCTGGAGTGTTTTGTATGTT+AGG | + | chr3.4:99575925-99575944 | None:intergenic | 35.0% |
| !! | TGTTAGCTCTGTTTCTATTG+AGG | - | chr3.4:99573024-99573043 | MS.gene063145:intron | 35.0% |
| !! | TTAGATGGATGATTTTGGAG+GGG | - | chr3.4:99573445-99573464 | MS.gene063145:CDS | 35.0% |
| !!! | TGGATCTTTGAGGTTGTTTT+AGG | + | chr3.4:99574253-99574272 | None:intergenic | 35.0% |
| !!! | TTTGGGCTTTAGTTTTCGTT+TGG | - | chr3.4:99573366-99573385 | MS.gene063145:CDS | 35.0% |
| AACTCTCGAGACAACAAACA+TGG | - | chr3.4:99576083-99576102 | MS.gene063145:intron | 40.0% | |
| AATGTTTCCAACCAAGCATC+GGG | + | chr3.4:99574342-99574361 | None:intergenic | 40.0% | |
| ACAAACCTGTTGATGCTGAA+TGG | - | chr3.4:99575361-99575380 | MS.gene063145:intron | 40.0% | |
| ACTAATCTGACAGGACATTG+TGG | - | chr3.4:99575081-99575100 | MS.gene063145:CDS | 40.0% | |
| ACTGATGCAGGTTACAACTA+TGG | - | chr3.4:99573671-99573690 | MS.gene063145:intron | 40.0% | |
| ACTGCAACAAACAACAACCA+AGG | + | chr3.4:99575149-99575168 | None:intergenic | 40.0% | |
| ACTGTGGGAATAGTAACAGT+TGG | + | chr3.4:99574075-99574094 | None:intergenic | 40.0% | |
| AGTGCGCAATGTGTTAAGTT+AGG | + | chr3.4:99574478-99574497 | None:intergenic | 40.0% | |
| ATACATCTACTGCCGAATCA+GGG | - | chr3.4:99574927-99574946 | MS.gene063145:CDS | 40.0% | |
| ATGGCCCTTTATCAGATCTA+AGG | + | chr3.4:99574563-99574582 | None:intergenic | 40.0% | |
| ATTTGTCAGGCTAAGATAGC+AGG | - | chr3.4:99575285-99575304 | MS.gene063145:CDS | 40.0% | |
| CAAATCCAGGGATTTGGAAA+GGG | + | chr3.4:99573478-99573497 | None:intergenic | 40.0% | |
| CAACCACGAATGCAAAATTG+AGG | + | chr3.4:99575604-99575623 | None:intergenic | 40.0% | |
| CACTTAATGTAGTGAGTTGC+CGG | - | chr3.4:99574494-99574513 | MS.gene063145:CDS | 40.0% | |
| CTCTTAGAAAGAAGAGTGGT+AGG | - | chr3.4:99572984-99573003 | MS.gene063145:intron | 40.0% | |
| GATGAAAGGAGAACCAGAAT+TGG | - | chr3.4:99572914-99572933 | MS.gene063145:intron | 40.0% | |
| GGAAGTTATGCTAACATGTC+TGG | - | chr3.4:99575312-99575331 | MS.gene063145:intron | 40.0% | |
| GGATGCCTTAGATCTGATAA+AGG | - | chr3.4:99574555-99574574 | MS.gene063145:intron | 40.0% | |
| GTAAAGGTTCTCAACAGTGA+AGG | - | chr3.4:99574732-99574751 | MS.gene063145:CDS | 40.0% | |
| TATGCTCAAATCCAGGGATT+TGG | + | chr3.4:99573484-99573503 | None:intergenic | 40.0% | |
| TCAAATCCAGGGATTTGGAA+AGG | + | chr3.4:99573479-99573498 | None:intergenic | 40.0% | |
| TCAACAGGTTTGTCTACCAT+TGG | + | chr3.4:99575354-99575373 | None:intergenic | 40.0% | |
| TCAGCCTATTACAAGTCAGA+CGG | + | chr3.4:99574645-99574664 | None:intergenic | 40.0% | |
| TCCACAACAGTCTAAATCCA+GGG | + | chr3.4:99574207-99574226 | None:intergenic | 40.0% | |
| TCCATAATTGTCAATCAGCG+TGG | + | chr3.4:99575676-99575695 | None:intergenic | 40.0% | |
| TCCCACAGTGTGATATAACT+AGG | - | chr3.4:99574086-99574105 | MS.gene063145:CDS | 40.0% | |
| TGACATGCTACAATGGAGAA+GGG | - | chr3.4:99573299-99573318 | MS.gene063145:CDS | 40.0% | |
| TGAGGATGTTAGAGATGTTG+AGG | - | chr3.4:99573042-99573061 | MS.gene063145:intron | 40.0% | |
| TTAGATCTGATAAAGGGCCA+TGG | - | chr3.4:99574562-99574581 | MS.gene063145:intron | 40.0% | |
| ! | AAGAAGCCACCAACCTTTTA+AGG | + | chr3.4:99575418-99575437 | None:intergenic | 40.0% |
| ! | ATACCCGTCTGACTTGTAAT+AGG | - | chr3.4:99574638-99574657 | MS.gene063145:intron | 40.0% |
| ! | ATCGCTTCCTTTTACCTGTT+CGG | + | chr3.4:99574909-99574928 | None:intergenic | 40.0% |
| ! | ATCTGAAATGCCTTACGAGA+AGG | - | chr3.4:99576215-99576234 | MS.gene063145:intron | 40.0% |
| ! | CAAAAAGGCTTTTGATGAGG+GGG | - | chr3.4:99575736-99575755 | MS.gene063145:CDS | 40.0% |
| ! | CAACCTCAATTTTGCATTCG+TGG | - | chr3.4:99575598-99575617 | MS.gene063145:intron | 40.0% |
| ! | CCGTCTTTGGTAACAAATCT+AGG | + | chr3.4:99576499-99576518 | None:intergenic | 40.0% |
| ! | GTAACCTGCATCAGTTTGTT+CGG | + | chr3.4:99573666-99573685 | None:intergenic | 40.0% |
| ! | GTTGTGAAGTATTACCCACA+TGG | - | chr3.4:99573579-99573598 | MS.gene063145:intron | 40.0% |
| ! | TAGTGCTTGATAGCATTGCT+TGG | - | chr3.4:99575820-99575839 | MS.gene063145:CDS | 40.0% |
| ! | TCCACGCTGATTGACAATTA+TGG | - | chr3.4:99575672-99575691 | MS.gene063145:CDS | 40.0% |
| ! | TTCTCGTAAGGCATTTCAGA+TGG | + | chr3.4:99576216-99576235 | None:intergenic | 40.0% |
| ! | TTTTGTTACTCTCACCGAAC+AGG | - | chr3.4:99574892-99574911 | MS.gene063145:CDS | 40.0% |
| !! | ATGTTTGTTGTCTCGAGAGT+TGG | + | chr3.4:99576084-99576103 | None:intergenic | 40.0% |
| !! | TTAAAAGGTTGGTGGCTTCT+TGG | - | chr3.4:99575417-99575436 | MS.gene063145:intron | 40.0% |
| !!! | CATGCCATTTTAGCAAGAAG+CGG | + | chr3.4:99576443-99576462 | None:intergenic | 40.0% |
| !!! | GCATCAGGATTTTGAGTTCA+AGG | - | chr3.4:99573545-99573564 | MS.gene063145:CDS | 40.0% |
| AACAATTCCGCCTTCTCGTA+AGG | + | chr3.4:99576228-99576247 | None:intergenic | 45.0% | |
| AAGAGGACGTGTTCCTGTAT+TGG | + | chr3.4:99575902-99575921 | None:intergenic | 45.0% | |
| AAGCCAAGTTGCGAGTAAGT+TGG | - | chr3.4:99576614-99576633 | MS.gene063145:intron | 45.0% | |
| AAGGAGTTAAAGCTCGGGTT+TGG | - | chr3.4:99575944-99575963 | MS.gene063145:intron | 45.0% | |
| AAGGTCTAGCGAAACGATCA+AGG | + | chr3.4:99572745-99572764 | None:intergenic | 45.0% | |
| ACAATGAGATATCGCACCTC+GGG | + | chr3.4:99573997-99574016 | None:intergenic | 45.0% | |
| ACTCTCACCGAACAGGTAAA+AGG | - | chr3.4:99574899-99574918 | MS.gene063145:CDS | 45.0% | |
| ACTTACTTCCTCACGAACAG+GGG | + | chr3.4:99575014-99575033 | None:intergenic | 45.0% | |
| AGACTTACTTCCTCACGAAC+AGG | + | chr3.4:99575016-99575035 | None:intergenic | 45.0% | |
| AGAGGCAAACATCTCTACAG+AGG | - | chr3.4:99575385-99575404 | MS.gene063145:intron | 45.0% | |
| AGGAGTTAAAGCTCGGGTTT+GGG | - | chr3.4:99575945-99575964 | MS.gene063145:intron | 45.0% | |
| AGGTCTAGCGAAACGATCAA+GGG | + | chr3.4:99572744-99572763 | None:intergenic | 45.0% | |
| AGTGAGTTGCCGGAATTTCT+CGG | - | chr3.4:99574504-99574523 | MS.gene063145:CDS | 45.0% | |
| AGTGGTAGGAGAAAGAGTGA+TGG | - | chr3.4:99572998-99573017 | MS.gene063145:intron | 45.0% | |
| ATGCCAACTTACTCGCAACT+TGG | + | chr3.4:99576620-99576639 | None:intergenic | 45.0% | |
| ATGGTGTAGACAAGGAAGGA+AGG | - | chr3.4:99573607-99573626 | MS.gene063145:intron | 45.0% | |
| CAGAGGTCTCACACCTTAAA+AGG | - | chr3.4:99575402-99575421 | MS.gene063145:intron | 45.0% | |
| CAGCCTATTACAAGTCAGAC+GGG | + | chr3.4:99574644-99574663 | None:intergenic | 45.0% | |
| CAGGCTAAGATAGCAGGAAA+GGG | - | chr3.4:99575291-99575310 | MS.gene063145:intron | 45.0% | |
| CATCATGGTGTAGACAAGGA+AGG | - | chr3.4:99573603-99573622 | MS.gene063145:intron | 45.0% | |
| CCATGCGAAGAGTTACCATT+GGG | + | chr3.4:99574788-99574807 | None:intergenic | 45.0% | |
| CGCTTCTTGCTAAAATGGCA+TGG | - | chr3.4:99576441-99576460 | MS.gene063145:CDS | 45.0% | |
| CTACAATGGAGAAGGGAGTT+TGG | - | chr3.4:99573306-99573325 | MS.gene063145:CDS | 45.0% | |
| CTCACACCTTAAAAGGTTGG+TGG | - | chr3.4:99575409-99575428 | MS.gene063145:intron | 45.0% | |
| CTCCACAACAGTCTAAATCC+AGG | + | chr3.4:99574208-99574227 | None:intergenic | 45.0% | |
| CTCCAGAAGGAGTTAAAGCT+CGG | - | chr3.4:99575938-99575957 | MS.gene063145:intron | 45.0% | |
| CTCTTCCATTCAGCATCAAC+AGG | + | chr3.4:99575369-99575388 | None:intergenic | 45.0% | |
| CTGACATGCTACAATGGAGA+AGG | - | chr3.4:99573298-99573317 | MS.gene063145:CDS | 45.0% | |
| CTGTTGATGCTGAATGGAAG+AGG | - | chr3.4:99575367-99575386 | MS.gene063145:intron | 45.0% | |
| CTTCCTTGTCTACACCATGA+TGG | + | chr3.4:99573605-99573624 | None:intergenic | 45.0% | |
| CTTGCACTATTGCTGCAAAG+AGG | - | chr3.4:99573754-99573773 | MS.gene063145:intron | 45.0% | |
| GACAATGAGATATCGCACCT+CGG | + | chr3.4:99573998-99574017 | None:intergenic | 45.0% | |
| GACTTACTTCCTCACGAACA+GGG | + | chr3.4:99575015-99575034 | None:intergenic | 45.0% | |
| GATACATCTACTGCCGAATC+AGG | - | chr3.4:99574926-99574945 | MS.gene063145:CDS | 45.0% | |
| GCTTTCAGTTGAACGCAAAG+AGG | + | chr3.4:99573842-99573861 | None:intergenic | 45.0% | |
| GGTCTCACACCTTAAAAGGT+TGG | - | chr3.4:99575406-99575425 | MS.gene063145:intron | 45.0% | |
| GTCACCGCTTCTTGCTAAAA+TGG | - | chr3.4:99576436-99576455 | MS.gene063145:CDS | 45.0% | |
| GTTAGGTGAGCTTGAAGAGA+AGG | - | chr3.4:99576170-99576189 | MS.gene063145:CDS | 45.0% | |
| TATTACCCACATGGCCATCA+TGG | - | chr3.4:99573588-99573607 | MS.gene063145:intron | 45.0% | |
| TCAGGCTAAGATAGCAGGAA+AGG | - | chr3.4:99575290-99575309 | MS.gene063145:intron | 45.0% | |
| TCAGGGTATGCTCAAATCCA+GGG | + | chr3.4:99573490-99573509 | None:intergenic | 45.0% | |
| TCATGGAGCCATAATGTACC+TGG | + | chr3.4:99574417-99574436 | None:intergenic | 45.0% | |
| TCCAGAAGGAGTTAAAGCTC+GGG | - | chr3.4:99575939-99575958 | MS.gene063145:intron | 45.0% | |
| TCTTTCCCTCCTTGCTGAAA+AGG | - | chr3.4:99576148-99576167 | MS.gene063145:CDS | 45.0% | |
| TGAAATGCCTTACGAGAAGG+CGG | - | chr3.4:99576218-99576237 | MS.gene063145:intron | 45.0% | |
| TGATCCGAACAAACTGATGC+AGG | - | chr3.4:99573659-99573678 | MS.gene063145:intron | 45.0% | |
| TTCAGCTTCTGACCCTGATT+CGG | + | chr3.4:99574942-99574961 | None:intergenic | 45.0% | |
| TTCAGGGTATGCTCAAATCC+AGG | + | chr3.4:99573491-99573510 | None:intergenic | 45.0% | |
| TTGCATTCGTGGTTGCAGTA+CGG | - | chr3.4:99575609-99575628 | MS.gene063145:intron | 45.0% | |
| TTGCGTTCAACTGAAAGCCA+AGG | - | chr3.4:99573844-99573863 | MS.gene063145:intron | 45.0% | |
| TTTATCATAAATGCCGGCCC+TGG | - | chr3.4:99574187-99574206 | MS.gene063145:intron | 45.0% | |
| TTTGCAGCAATAGTGCAAGC+AGG | + | chr3.4:99573753-99573772 | None:intergenic | 45.0% | |
| ! | ACCTAACCTTTTCAGCAAGG+AGG | + | chr3.4:99576157-99576176 | None:intergenic | 45.0% |
| ! | AGAGTTACCATTGGGTATCG+TGG | + | chr3.4:99574780-99574799 | None:intergenic | 45.0% |
| ! | CCTAACCTTTTCAGCAAGGA+GGG | + | chr3.4:99576156-99576175 | None:intergenic | 45.0% |
| ! | CTCACCTAACCTTTTCAGCA+AGG | + | chr3.4:99576160-99576179 | None:intergenic | 45.0% |
| ! | CTCTCTACGAAGCGTTAATG+AGG | - | chr3.4:99576554-99576573 | MS.gene063145:CDS | 45.0% |
| ! | GATTTTCCTCTGTCTGTGCT+TGG | + | chr3.4:99576128-99576147 | None:intergenic | 45.0% |
| !! | CAGGAAGTTTGTTGGTCATG+CGG | + | chr3.4:99576026-99576045 | None:intergenic | 45.0% |
| !!! | TCAGGTTTTGAGGGGTTTTC+TGG | - | chr3.4:99572845-99572864 | MS.gene063145:intron | 45.0% |
| !!! | TGCTATAGCCTTTTTGGGGT+TGG | - | chr3.4:99575645-99575664 | MS.gene063145:intron | 45.0% |
| AACAAGCCAAGCACAGACAG+AGG | - | chr3.4:99576119-99576138 | MS.gene063145:intron | 50.0% | |
| ACTCATTCAGCGGTTGCAGA+AGG | - | chr3.4:99573954-99573973 | MS.gene063145:intron | 50.0% | |
| AGCTTCCCTTTCCAAATCCC+TGG | - | chr3.4:99573470-99573489 | MS.gene063145:CDS | 50.0% | |
| CAAATGTTAGGGCCCGTCTT+TGG | + | chr3.4:99576512-99576531 | None:intergenic | 50.0% | |
| CAACAGTCTAAATCCAGGGC+CGG | + | chr3.4:99574203-99574222 | None:intergenic | 50.0% | |
| CAACCGCTGAATGAGTTCAC+GGG | + | chr3.4:99573950-99573969 | None:intergenic | 50.0% | |
| CAATGAGATATCGCACCTCG+GGG | + | chr3.4:99573996-99574015 | None:intergenic | 50.0% | |
| CAGGTACCTCCGAGAAATTC+CGG | + | chr3.4:99574516-99574535 | None:intergenic | 50.0% | |
| CCCAATGGTAACTCTTCGCA+TGG | - | chr3.4:99574785-99574804 | MS.gene063145:intron | 50.0% | |
| CCCTCCTTGCTGAAAAGGTT+AGG | - | chr3.4:99576153-99576172 | MS.gene063145:CDS | 50.0% | |
| CTACACCATGATGGCCATGT+GGG | + | chr3.4:99573596-99573615 | None:intergenic | 50.0% | |
| GCAACCGCTGAATGAGTTCA+CGG | + | chr3.4:99573951-99573970 | None:intergenic | 50.0% | |
| GCCATGCGAAGAGTTACCAT+TGG | + | chr3.4:99574789-99574808 | None:intergenic | 50.0% | |
| GCCCTGGATTTAGACTGTTG+TGG | - | chr3.4:99574203-99574222 | MS.gene063145:intron | 50.0% | |
| GCGGGCAAGACAAGTAGTAA+AGG | - | chr3.4:99574716-99574735 | MS.gene063145:CDS | 50.0% | |
| GGCGGAATTGTTGAATGCTG+CGG | - | chr3.4:99576236-99576255 | MS.gene063145:intron | 50.0% | |
| GGTCTAGCGAAACGATCAAG+GGG | + | chr3.4:99572743-99572762 | None:intergenic | 50.0% | |
| GGTTCTCAACAGTGAAGGGA+AGG | - | chr3.4:99574737-99574756 | MS.gene063145:CDS | 50.0% | |
| TCATGCGGCAAGCAACTTGA+CGG | + | chr3.4:99576011-99576030 | None:intergenic | 50.0% | |
| TCTACACCATGATGGCCATG+TGG | + | chr3.4:99573597-99573616 | None:intergenic | 50.0% | |
| TGGAGTAGCCAACCCCAAAA+AGG | + | chr3.4:99575656-99575675 | None:intergenic | 50.0% | |
| TGGCCATCATGGTGTAGACA+AGG | - | chr3.4:99573599-99573618 | MS.gene063145:intron | 50.0% | |
| TGGTTCTCAATGGCGAACCA+CGG | - | chr3.4:99574694-99574713 | MS.gene063145:CDS | 50.0% | |
| TTGATGAGGGGGTCTGTTAG+AGG | - | chr3.4:99575747-99575766 | MS.gene063145:CDS | 50.0% | |
| ! | ACCCGAGCTTTAACTCCTTC+TGG | + | chr3.4:99575943-99575962 | None:intergenic | 50.0% |
| ! | TGTGGGCTGACATGCTACAA+TGG | - | chr3.4:99573292-99573311 | MS.gene063145:CDS | 50.0% |
| !! | GTCTGTGCTTGGCTTGTTGA+AGG | + | chr3.4:99576117-99576136 | None:intergenic | 50.0% |
| !! | TGGTGCTGACACCATTATGC+AGG | - | chr3.4:99573326-99573345 | MS.gene063145:CDS | 50.0% |
| ACATCAGGAAGAAGGCAGCC+AGG | + | chr3.4:99575975-99575994 | None:intergenic | 55.0% | |
| ACCTGCTCTTGTGCAGACGA+GGG | - | chr3.4:99574531-99574550 | MS.gene063145:CDS | 55.0% | |
| CACGAACAGGGGTCAGTCTA+AGG | + | chr3.4:99575003-99575022 | None:intergenic | 55.0% | |
| CAGCCCGTGAACTCATTCAG+CGG | - | chr3.4:99573944-99573963 | MS.gene063145:intron | 55.0% | |
| CATCAGGAAGAAGGCAGCCA+GGG | + | chr3.4:99575974-99575993 | None:intergenic | 55.0% | |
| CTCGCAACTTGGCTTCTTCC+TGG | + | chr3.4:99576609-99576628 | None:intergenic | 55.0% | |
| GACATTGCCCGATGCTTGGT+TGG | - | chr3.4:99574332-99574351 | MS.gene063145:intron | 55.0% | |
| GAGTTGCCGGAATTTCTCGG+AGG | - | chr3.4:99574507-99574526 | MS.gene063145:CDS | 55.0% | |
| GCAACTTGGCTTCTTCCTGG+CGG | + | chr3.4:99576606-99576625 | None:intergenic | 55.0% | |
| GCTTGCTTACATAGACCGCC+AGG | - | chr3.4:99576588-99576607 | MS.gene063145:CDS | 55.0% | |
| TACCTGCTCTTGTGCAGACG+AGG | - | chr3.4:99574530-99574549 | MS.gene063145:CDS | 55.0% | |
| TAGACTGACCCCTGTTCGTG+AGG | - | chr3.4:99575003-99575022 | MS.gene063145:intron | 55.0% | |
| TGCGAAGCCACGATACCCAA+TGG | - | chr3.4:99574770-99574789 | MS.gene063145:intron | 55.0% | |
| TGCTGACATTGCCCGATGCT+TGG | - | chr3.4:99574328-99574347 | MS.gene063145:intron | 55.0% | |
| TGTTGAATGCTGCGGTCTGC+CGG | - | chr3.4:99576244-99576263 | MS.gene063145:intron | 55.0% | |
| TTCTCAATGGCGAACCACGG+CGG | - | chr3.4:99574697-99574716 | MS.gene063145:CDS | 55.0% | |
| ! | CTGCTTCCAAAGCATCCACC+CGG | + | chr3.4:99576266-99576285 | None:intergenic | 55.0% |
| ACTACTTGTCTTGCCCGCCG+TGG | + | chr3.4:99574714-99574733 | None:intergenic | 60.0% | |
| CAGCGGTTGCAGAAGGTCGA+CGG | - | chr3.4:99573961-99573980 | MS.gene063145:intron | 60.0% | |
| CGACGGTGACAATTACCCCG+AGG | - | chr3.4:99573978-99573997 | MS.gene063145:intron | 60.0% | |
| GTTGAATGCTGCGGTCTGCC+GGG | - | chr3.4:99576245-99576264 | MS.gene063145:intron | 60.0% | |
| TCCCTCGTCTGCACAAGAGC+AGG | + | chr3.4:99574535-99574554 | None:intergenic | 60.0% | |
| TCTCAATGGCGAACCACGGC+GGG | - | chr3.4:99574698-99574717 | MS.gene063145:CDS | 60.0% | |
| TGCTCTTGTGCAGACGAGGG+AGG | - | chr3.4:99574534-99574553 | MS.gene063145:CDS | 60.0% | |
| AGCTCGGGTTTGGGTAGCCC+TGG | - | chr3.4:99575954-99575973 | MS.gene063145:intron | 65.0% | |
| GGTCTGCCGGGTGGATGCTT+TGG | - | chr3.4:99576257-99576276 | MS.gene063145:intron | 65.0% | |
| GAATGCTGCGGTCTGCCGGG+TGG | - | chr3.4:99576248-99576267 | MS.gene063145:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 99572731 | 99576746 | 99572731 | ID=MS.gene063145 |
| chr3.4 | mRNA | 99572731 | 99576746 | 99572731 | ID=MS.gene063145.t1;Parent=MS.gene063145 |
| chr3.4 | exon | 99576713 | 99576746 | 99576713 | ID=MS.gene063145.t1.exon1;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99576713 | 99576746 | 99576713 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99576325 | 99576628 | 99576325 | ID=MS.gene063145.t1.exon2;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99576325 | 99576628 | 99576325 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99576130 | 99576229 | 99576130 | ID=MS.gene063145.t1.exon3;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99576130 | 99576229 | 99576130 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99575659 | 99575925 | 99575659 | ID=MS.gene063145.t1.exon4;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99575659 | 99575925 | 99575659 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99575478 | 99575555 | 99575478 | ID=MS.gene063145.t1.exon5;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99575478 | 99575555 | 99575478 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99575204 | 99575305 | 99575204 | ID=MS.gene063145.t1.exon6;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99575204 | 99575305 | 99575204 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99575060 | 99575109 | 99575060 | ID=MS.gene063145.t1.exon7;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99575060 | 99575109 | 99575060 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99574872 | 99574971 | 99574872 | ID=MS.gene063145.t1.exon8;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99574872 | 99574971 | 99574872 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99574686 | 99574784 | 99574686 | ID=MS.gene063145.t1.exon9;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99574686 | 99574784 | 99574686 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99574450 | 99574563 | 99574450 | ID=MS.gene063145.t1.exon10;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99574450 | 99574563 | 99574450 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99574054 | 99574183 | 99574054 | ID=MS.gene063145.t1.exon11;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99574054 | 99574183 | 99574054 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99573172 | 99573569 | 99573172 | ID=MS.gene063145.t1.exon12;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99573172 | 99573569 | 99573172 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99572850 | 99572924 | 99572850 | ID=MS.gene063145.t1.exon13;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99572850 | 99572924 | 99572850 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| chr3.4 | exon | 99572731 | 99572751 | 99572731 | ID=MS.gene063145.t1.exon14;Parent=MS.gene063145.t1 |
| chr3.4 | CDS | 99572731 | 99572751 | 99572731 | ID=cds.MS.gene063145.t1;Parent=MS.gene063145.t1 |
| Gene Sequence |
| Protein sequence |
