Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002720.t1 | XP_024633137.1 | 99 | 594 | 6 | 0 | 40 | 633 | 39 | 632 | 0.00E+00 | 1140.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002720.t1 | P58223 | 51.1 | 607 | 249 | 13 | 41 | 633 | 34 | 606 | 2.8e-146 | 520.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002720.t1 | A0A396J6S5 | 99.0 | 594 | 6 | 0 | 40 | 633 | 39 | 632 | 0.0e+00 | 1140.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene05834 | MS.gene002720 | PPI |
MS.gene040757 | MS.gene002720 | PPI |
MS.gene023324 | MS.gene002720 | PPI |
MS.gene08301 | MS.gene002720 | PPI |
MS.gene96254 | MS.gene002720 | PPI |
MS.gene93333 | MS.gene002720 | PPI |
MS.gene073734 | MS.gene002720 | PPI |
MS.gene64804 | MS.gene002720 | PPI |
MS.gene002720 | MS.gene035486 | PPI |
MS.gene34911 | MS.gene002720 | PPI |
MS.gene002720 | MS.gene67483 | PPI |
MS.gene004399 | MS.gene002720 | PPI |
MS.gene002720 | MS.gene05834 | PPI |
MS.gene52115 | MS.gene002720 | PPI |
MS.gene057667 | MS.gene002720 | PPI |
MS.gene59503 | MS.gene002720 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002720.t1 | MTR_2g019090 | 98.420 | 633 | 8 | 2 | 1 | 633 | 1 | 631 | 0.0 | 1266 |
MS.gene002720.t1 | MTR_2g019090 | 98.480 | 592 | 8 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1193 |
MS.gene002720.t1 | MTR_2g019090 | 22.472 | 356 | 230 | 10 | 310 | 631 | 38 | 381 | 3.83e-15 | 79.3 |
MS.gene002720.t1 | MTR_6g012630 | 32.062 | 577 | 304 | 18 | 5 | 550 | 11 | 530 | 8.88e-71 | 239 |
MS.gene002720.t1 | MTR_6g012630 | 28.267 | 329 | 181 | 11 | 312 | 617 | 45 | 341 | 2.00e-21 | 98.6 |
MS.gene002720.t1 | MTR_6g012630 | 32.062 | 577 | 304 | 18 | 5 | 550 | 11 | 530 | 1.07e-70 | 239 |
MS.gene002720.t1 | MTR_6g012630 | 28.267 | 329 | 181 | 11 | 312 | 617 | 45 | 341 | 1.45e-21 | 99.4 |
MS.gene002720.t1 | MTR_6g012630 | 33.624 | 458 | 248 | 14 | 5 | 447 | 11 | 427 | 1.19e-61 | 212 |
MS.gene002720.t1 | MTR_6g012630 | 28.267 | 329 | 181 | 11 | 312 | 617 | 45 | 341 | 1.06e-21 | 99.0 |
MS.gene002720.t1 | MTR_7g011080 | 32.787 | 549 | 301 | 17 | 23 | 548 | 21 | 524 | 2.95e-61 | 214 |
MS.gene002720.t1 | MTR_7g011080 | 27.492 | 331 | 180 | 9 | 312 | 613 | 47 | 346 | 1.12e-17 | 87.0 |
MS.gene002720.t1 | MTR_4g093650 | 28.346 | 635 | 380 | 17 | 36 | 631 | 14 | 612 | 2.32e-57 | 204 |
MS.gene002720.t1 | MTR_4g093650 | 29.474 | 190 | 118 | 5 | 27 | 215 | 250 | 424 | 7.35e-16 | 81.6 |
MS.gene002720.t1 | MTR_3g110650 | 28.462 | 650 | 381 | 15 | 43 | 632 | 32 | 657 | 2.17e-55 | 199 |
MS.gene002720.t1 | MTR_3g091800 | 26.393 | 610 | 397 | 15 | 44 | 633 | 64 | 641 | 1.79e-53 | 194 |
MS.gene002720.t1 | MTR_3g091800 | 27.714 | 350 | 202 | 11 | 298 | 618 | 57 | 384 | 1.09e-18 | 90.5 |
MS.gene002720.t1 | MTR_5g031720 | 27.063 | 606 | 370 | 14 | 43 | 630 | 39 | 590 | 4.43e-50 | 184 |
MS.gene002720.t1 | MTR_4g008080 | 28.955 | 335 | 195 | 6 | 148 | 479 | 101 | 395 | 4.70e-39 | 152 |
MS.gene002720.t1 | MTR_4g008080 | 26.904 | 197 | 117 | 5 | 41 | 237 | 225 | 394 | 4.19e-13 | 72.8 |
MS.gene002720.t1 | MTR_4g008080 | 22.293 | 314 | 178 | 9 | 313 | 613 | 17 | 277 | 9.29e-12 | 68.6 |
MS.gene002720.t1 | MTR_2g009650 | 28.942 | 463 | 285 | 13 | 43 | 471 | 48 | 500 | 2.67e-38 | 151 |
MS.gene002720.t1 | MTR_2g009650 | 27.123 | 365 | 208 | 14 | 299 | 620 | 40 | 389 | 7.70e-17 | 85.1 |
MS.gene002720.t1 | MTR_2g009650 | 29.412 | 187 | 116 | 3 | 30 | 215 | 318 | 489 | 1.77e-13 | 74.3 |
MS.gene002720.t1 | MTR_2g009650 | 37.864 | 103 | 61 | 2 | 532 | 631 | 660 | 762 | 6.47e-11 | 65.9 |
MS.gene002720.t1 | MTR_7g115340 | 25.215 | 349 | 224 | 7 | 313 | 630 | 46 | 388 | 2.45e-24 | 106 |
MS.gene002720.t1 | MTR_7g115340 | 24.234 | 359 | 205 | 9 | 45 | 368 | 49 | 375 | 1.38e-16 | 83.2 |
MS.gene002720.t1 | MTR_7g115340 | 25.424 | 354 | 217 | 8 | 313 | 630 | 114 | 456 | 4.32e-24 | 106 |
MS.gene002720.t1 | MTR_7g115340 | 24.234 | 359 | 205 | 9 | 45 | 368 | 117 | 443 | 3.77e-16 | 82.0 |
MS.gene002720.t1 | MTR_1g090773 | 27.829 | 327 | 178 | 11 | 316 | 626 | 38 | 322 | 1.79e-20 | 93.6 |
MS.gene002720.t1 | MTR_1g070380 | 29.121 | 182 | 111 | 4 | 45 | 224 | 167 | 332 | 7.91e-17 | 84.3 |
MS.gene002720.t1 | MTR_1g070380 | 30.357 | 168 | 105 | 3 | 313 | 468 | 164 | 331 | 2.82e-12 | 70.1 |
MS.gene002720.t1 | MTR_1g070380 | 29.121 | 182 | 110 | 4 | 45 | 224 | 167 | 331 | 1.21e-16 | 84.0 |
MS.gene002720.t1 | MTR_1g070380 | 30.539 | 167 | 105 | 3 | 313 | 468 | 164 | 330 | 3.88e-12 | 69.7 |
MS.gene002720.t1 | MTR_4g127380 | 26.667 | 345 | 210 | 10 | 315 | 630 | 45 | 375 | 1.57e-14 | 76.6 |
MS.gene002720.t1 | MTR_4g127380 | 30.220 | 182 | 109 | 6 | 45 | 224 | 46 | 211 | 8.18e-11 | 65.1 |
MS.gene002720.t1 | MTR_7g080630 | 24.850 | 334 | 170 | 7 | 28 | 349 | 73 | 337 | 3.58e-14 | 75.1 |
MS.gene002720.t1 | MTR_7g080630 | 30.769 | 182 | 111 | 4 | 303 | 469 | 89 | 270 | 1.04e-13 | 73.6 |
MS.gene002720.t1 | MTR_7g080630 | 30.769 | 182 | 111 | 4 | 303 | 469 | 89 | 270 | 5.32e-14 | 73.6 |
MS.gene002720.t1 | MTR_7g080630 | 27.801 | 241 | 148 | 5 | 28 | 256 | 73 | 299 | 2.86e-13 | 71.6 |
MS.gene002720.t1 | MTR_7g080630 | 30.769 | 182 | 111 | 4 | 303 | 469 | 89 | 270 | 1.00e-13 | 72.8 |
MS.gene002720.t1 | MTR_7g080630 | 27.626 | 257 | 155 | 6 | 22 | 266 | 67 | 304 | 2.05e-13 | 72.0 |
MS.gene002720.t1 | MTR_1g090773 | 28.195 | 266 | 138 | 11 | 376 | 626 | 12 | 239 | 2.43e-13 | 70.9 |
MS.gene002720.t1 | MTR_2g038020 | 25.429 | 350 | 214 | 9 | 313 | 630 | 69 | 403 | 1.02e-12 | 71.2 |
MS.gene002720.t1 | MTR_5g049770 | 26.293 | 232 | 145 | 7 | 403 | 628 | 28 | 239 | 7.33e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002720.t1 | AT5G46190 | 56.300 | 627 | 244 | 16 | 25 | 633 | 30 | 644 | 0.0 | 626 |
MS.gene002720.t1 | AT5G46190 | 56.300 | 627 | 244 | 16 | 25 | 633 | 30 | 644 | 0.0 | 626 |
MS.gene002720.t1 | AT5G46190 | 56.300 | 627 | 244 | 16 | 25 | 633 | 30 | 644 | 0.0 | 626 |
MS.gene002720.t1 | AT5G46190 | 52.530 | 672 | 244 | 17 | 25 | 633 | 30 | 689 | 0.0 | 602 |
MS.gene002720.t1 | AT4G18375 | 49.923 | 647 | 269 | 15 | 1 | 633 | 1 | 606 | 0.0 | 568 |
MS.gene002720.t1 | AT4G18375 | 48.582 | 564 | 240 | 14 | 1 | 550 | 1 | 528 | 7.98e-162 | 474 |
MS.gene002720.t1 | AT4G18375 | 25.434 | 346 | 208 | 12 | 312 | 618 | 33 | 367 | 1.98e-16 | 83.2 |
MS.gene002720.t1 | AT4G18375 | 49.296 | 426 | 170 | 11 | 221 | 633 | 1 | 393 | 1.95e-117 | 355 |
MS.gene002720.t1 | AT5G15270 | 34.728 | 478 | 253 | 15 | 6 | 471 | 17 | 447 | 9.39e-74 | 246 |
MS.gene002720.t1 | AT5G15270 | 28.319 | 339 | 188 | 9 | 312 | 630 | 48 | 351 | 3.14e-28 | 119 |
MS.gene002720.t1 | AT5G15270 | 33.142 | 522 | 277 | 16 | 6 | 515 | 17 | 478 | 2.46e-73 | 246 |
MS.gene002720.t1 | AT5G15270 | 28.319 | 339 | 188 | 9 | 312 | 630 | 48 | 351 | 3.09e-28 | 119 |
MS.gene002720.t1 | AT5G15270 | 33.142 | 522 | 277 | 16 | 6 | 515 | 17 | 478 | 2.46e-73 | 246 |
MS.gene002720.t1 | AT5G15270 | 28.319 | 339 | 188 | 9 | 312 | 630 | 48 | 351 | 3.09e-28 | 119 |
MS.gene002720.t1 | AT1G51580 | 26.625 | 646 | 376 | 15 | 41 | 632 | 17 | 618 | 3.27e-54 | 196 |
MS.gene002720.t1 | AT1G14170 | 30.675 | 489 | 263 | 14 | 4 | 478 | 9 | 435 | 4.66e-50 | 181 |
MS.gene002720.t1 | AT5G53060 | 27.508 | 618 | 379 | 16 | 44 | 632 | 69 | 646 | 5.40e-50 | 184 |
MS.gene002720.t1 | AT5G53060 | 23.902 | 410 | 235 | 15 | 9 | 385 | 284 | 649 | 4.45e-12 | 69.7 |
MS.gene002720.t1 | AT1G14170 | 30.405 | 444 | 245 | 12 | 45 | 478 | 13 | 402 | 9.53e-48 | 174 |
MS.gene002720.t1 | AT1G14170 | 27.528 | 178 | 106 | 3 | 315 | 469 | 12 | 189 | 2.79e-14 | 75.9 |
MS.gene002720.t1 | AT1G14170 | 30.405 | 444 | 245 | 12 | 45 | 478 | 21 | 410 | 1.41e-47 | 174 |
MS.gene002720.t1 | AT1G14170 | 28.022 | 182 | 108 | 3 | 311 | 469 | 16 | 197 | 2.71e-15 | 79.3 |
MS.gene002720.t1 | AT5G53060 | 29.306 | 447 | 269 | 11 | 44 | 472 | 69 | 486 | 2.85e-42 | 161 |
MS.gene002720.t1 | AT5G53060 | 29.412 | 204 | 115 | 4 | 317 | 491 | 71 | 274 | 4.02e-13 | 72.8 |
MS.gene002720.t1 | AT5G53060 | 27.861 | 201 | 117 | 6 | 41 | 236 | 323 | 500 | 3.58e-11 | 66.6 |
MS.gene002720.t1 | AT5G64390 | 29.040 | 396 | 206 | 11 | 311 | 631 | 449 | 844 | 1.23e-34 | 140 |
MS.gene002720.t1 | AT5G64390 | 33.333 | 195 | 102 | 5 | 316 | 487 | 49 | 238 | 1.92e-16 | 84.0 |
MS.gene002720.t1 | AT5G64390 | 29.947 | 187 | 109 | 4 | 44 | 221 | 48 | 221 | 4.93e-14 | 76.3 |
MS.gene002720.t1 | AT2G22600 | 25.000 | 656 | 371 | 19 | 44 | 630 | 26 | 629 | 7.16e-31 | 128 |
MS.gene002720.t1 | AT5G64390 | 29.289 | 239 | 139 | 5 | 311 | 539 | 449 | 667 | 3.75e-24 | 108 |
MS.gene002720.t1 | AT5G64390 | 33.333 | 195 | 102 | 5 | 316 | 487 | 49 | 238 | 1.78e-16 | 84.0 |
MS.gene002720.t1 | AT5G64390 | 29.947 | 187 | 109 | 4 | 44 | 221 | 48 | 221 | 5.64e-14 | 75.9 |
MS.gene002720.t1 | AT5G64390 | 29.289 | 239 | 139 | 5 | 311 | 539 | 449 | 667 | 4.30e-24 | 108 |
MS.gene002720.t1 | AT5G64390 | 33.333 | 195 | 102 | 5 | 316 | 487 | 49 | 238 | 1.94e-16 | 84.0 |
MS.gene002720.t1 | AT5G64390 | 29.947 | 187 | 109 | 4 | 44 | 221 | 48 | 221 | 5.32e-14 | 75.9 |
MS.gene002720.t1 | AT5G64390 | 47.826 | 69 | 36 | 0 | 563 | 631 | 785 | 853 | 9.53e-11 | 65.5 |
MS.gene002720.t1 | AT5G09560 | 25.427 | 468 | 288 | 15 | 41 | 471 | 28 | 471 | 7.25e-24 | 106 |
MS.gene002720.t1 | AT3G04610 | 26.966 | 356 | 206 | 10 | 313 | 630 | 186 | 525 | 1.92e-23 | 105 |
MS.gene002720.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 185 | 512 | 1.91e-17 | 86.7 |
MS.gene002720.t1 | AT3G04610 | 26.966 | 356 | 206 | 10 | 313 | 630 | 186 | 525 | 1.92e-23 | 105 |
MS.gene002720.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 185 | 512 | 1.91e-17 | 86.7 |
MS.gene002720.t1 | AT3G04610 | 26.966 | 356 | 206 | 10 | 313 | 630 | 162 | 501 | 1.97e-23 | 105 |
MS.gene002720.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 161 | 488 | 1.06e-17 | 87.4 |
MS.gene002720.t1 | AT3G04610 | 26.966 | 356 | 206 | 10 | 313 | 630 | 162 | 501 | 1.97e-23 | 105 |
MS.gene002720.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 161 | 488 | 1.06e-17 | 87.4 |
MS.gene002720.t1 | AT5G04430 | 29.940 | 334 | 174 | 13 | 298 | 619 | 19 | 304 | 1.19e-21 | 97.1 |
MS.gene002720.t1 | AT4G26000 | 27.250 | 400 | 224 | 16 | 269 | 631 | 39 | 408 | 3.27e-19 | 91.7 |
MS.gene002720.t1 | AT5G04430 | 28.614 | 332 | 160 | 13 | 298 | 619 | 19 | 283 | 1.27e-16 | 81.6 |
MS.gene002720.t1 | AT2G03110 | 32.468 | 154 | 92 | 3 | 76 | 223 | 1 | 148 | 3.54e-15 | 73.9 |
MS.gene002720.t1 | AT2G03110 | 32.468 | 154 | 92 | 3 | 76 | 223 | 1 | 148 | 3.54e-15 | 73.9 |
MS.gene002720.t1 | AT2G03110 | 32.468 | 154 | 92 | 3 | 76 | 223 | 1 | 148 | 3.54e-15 | 73.9 |
Find 181 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCGCGTTGCTCTTATTTC+TGG | 0.191956 | 2.1:+67883446 | MS.gene002720:CDS |
CTTCAACAGCTACGGATTTC+AGG | 0.225024 | 2.1:-67881202 | None:intergenic |
GTTGTTTCAATTCAGATTTC+AGG | 0.243722 | 2.1:+67883383 | MS.gene002720:intron |
GAAGTTATTGGGAGTGTTAT+TGG | 0.244583 | 2.1:+67879214 | MS.gene002720:CDS |
GTGAATCGGAAGCTGTAAAA+AGG | 0.256000 | 2.1:+67879886 | MS.gene002720:CDS |
CATTCTTCTAGAAGCCATTA+TGG | 0.270987 | 2.1:+67881751 | MS.gene002720:CDS |
TCATTGTCATCTGCATATTT+AGG | 0.283128 | 2.1:-67881395 | None:intergenic |
AGGTCCTTTCCTCAACTTAT+AGG | 0.302744 | 2.1:+67880074 | MS.gene002720:CDS |
CGGAACCTATGTGGCGATTA+TGG | 0.305791 | 2.1:-67881609 | None:intergenic |
CTTATTCTTTCGTTTCTTCT+CGG | 0.307505 | 2.1:-67879473 | None:intergenic |
CTTAACTCTCAGTTGTTTGA+TGG | 0.313059 | 2.1:-67879560 | None:intergenic |
AGTCCACCAGGTGGGTAAAT+AGG | 0.315686 | 2.1:-67880020 | None:intergenic |
ATGATGCTATGAGGGGTTTC+TGG | 0.315690 | 2.1:-67879981 | None:intergenic |
CTGTGCCCTTCTGACAAAAT+TGG | 0.318632 | 2.1:+67880227 | MS.gene002720:CDS |
GCGATCACCCCGGTAAGATT+TGG | 0.324119 | 2.1:-67883429 | None:intergenic |
CAGAGGACTGGAAGCGGAAC+TGG | 0.325033 | 2.1:+67881718 | MS.gene002720:CDS |
CTATGCCCGAATGAAGTTAT+TGG | 0.328595 | 2.1:+67879202 | MS.gene002720:CDS |
GACAAAATTGGACAACTCAT+TGG | 0.328844 | 2.1:+67880239 | MS.gene002720:CDS |
CGAGAAGAAACGAAAGAATA+AGG | 0.329292 | 2.1:+67879474 | MS.gene002720:CDS |
AGAACTAACCTTCCTGATAT+TGG | 0.336256 | 2.1:-67882800 | None:intergenic |
CCCAGCCTTGCCAATCAAAA+TGG | 0.340791 | 2.1:-67879533 | None:intergenic |
AAGGACCTAGGTTGAATAAT+AGG | 0.343313 | 2.1:-67880059 | None:intergenic |
ATACACCCTATCACTTTAGA+TGG | 0.351141 | 2.1:-67881293 | None:intergenic |
CTAGTTCCATCTAAAGTGAT+AGG | 0.353687 | 2.1:+67881287 | MS.gene002720:CDS |
CGATGCTTGGCACCGGGAAA+TGG | 0.361573 | 2.1:-67879301 | None:intergenic |
GACTGGAAGCGGAACTGGAC+TGG | 0.362440 | 2.1:+67881723 | MS.gene002720:CDS |
TACAATTAATTCTTCAGATT+GGG | 0.362888 | 2.1:-67880198 | None:intergenic |
ATTTGTAGAATGGGTGAAAA+TGG | 0.369025 | 2.1:+67879052 | None:intergenic |
CTTCCGGTAGTTTCCAGTCT+TGG | 0.373757 | 2.1:+67880170 | MS.gene002720:CDS |
GTGACCGTGGAGGCCGTAAT+GGG | 0.379052 | 2.1:+67879104 | MS.gene002720:CDS |
AAGGTTGTGGATCCATTTCC+CGG | 0.384862 | 2.1:+67879289 | MS.gene002720:CDS |
TTTCTGAGTCCAAATCTTAC+CGG | 0.391365 | 2.1:+67883420 | MS.gene002720:CDS |
TTACAATTAATTCTTCAGAT+TGG | 0.393107 | 2.1:-67880199 | None:intergenic |
TATGCCCGAATGAAGTTATT+GGG | 0.403038 | 2.1:+67879203 | MS.gene002720:CDS |
TCAAGAGGAATGTCCTCCTT+GGG | 0.406551 | 2.1:-67879948 | None:intergenic |
GGTGACCGTGGAGGCCGTAA+TGG | 0.409157 | 2.1:+67879103 | MS.gene002720:CDS |
GAAAAGTTATAAATTCAATA+AGG | 0.410877 | 2.1:+67879245 | MS.gene002720:CDS |
TCTGTACTCATCTCCCCTTC+CGG | 0.412310 | 2.1:+67880154 | MS.gene002720:CDS |
ACACTCCCAATAACTTCATT+CGG | 0.414326 | 2.1:-67879208 | None:intergenic |
CTTGATCCAGGCATTCATAA+TGG | 0.415084 | 2.1:+67883499 | MS.gene002720:CDS |
AAAGTGATAGGGTGTATTAT+AGG | 0.415444 | 2.1:+67881299 | MS.gene002720:CDS |
GGGAGTGTTATTGGTAAGAA+TGG | 0.422827 | 2.1:+67879223 | MS.gene002720:CDS |
GTGCAATCATAAATGAAATT+CGG | 0.424587 | 2.1:+67881330 | MS.gene002720:CDS |
AACCTTGATAAGAGCATCTT+GGG | 0.427114 | 2.1:-67879410 | None:intergenic |
GAGCAAATCTAGCCAATATC+AGG | 0.429033 | 2.1:+67882788 | MS.gene002720:CDS |
ACTAGGAGCCGGATTGAAAC+CGG | 0.429446 | 2.1:-67881269 | None:intergenic |
TTCAATAAGGCAAGAGAGTA+GGG | 0.433433 | 2.1:+67879258 | MS.gene002720:CDS |
AGTAAGAATCATATCCATAA+TGG | 0.435755 | 2.1:-67881765 | None:intergenic |
TTCAGATAGTCTTGAGACTA+AGG | 0.437735 | 2.1:+67881557 | MS.gene002720:CDS |
GTCAAGAGGAATGTCCTCCT+TGG | 0.441458 | 2.1:-67879949 | None:intergenic |
ACATTCATCATGACGAGCCT+TGG | 0.443693 | 2.1:-67880327 | None:intergenic |
ACAAAATTGGACAACTCATT+GGG | 0.447697 | 2.1:+67880240 | MS.gene002720:CDS |
TTGTCACGTTAAGGATAAGA+AGG | 0.454912 | 2.1:+67879339 | MS.gene002720:CDS |
CACTCCCAATAACTTCATTC+GGG | 0.455340 | 2.1:-67879207 | None:intergenic |
GCATCTTGGGCAGCACATAA+AGG | 0.456029 | 2.1:-67879397 | None:intergenic |
TCCCCTTTCAACATTGGAGA+TGG | 0.456856 | 2.1:+67882723 | MS.gene002720:CDS |
AGATTGGGAAGCACCAAGAC+TGG | 0.462166 | 2.1:-67880183 | None:intergenic |
AACCATCTCCAATGTTGAAA+GGG | 0.464712 | 2.1:-67882725 | None:intergenic |
AACAGAACTGCCAGCGTACA+AGG | 0.465142 | 2.1:-67881635 | None:intergenic |
AATTGTTATAACTCGATGCT+TGG | 0.470989 | 2.1:-67879314 | None:intergenic |
TCAGGGTCAGCTGCATCCTT+CGG | 0.471291 | 2.1:-67879607 | None:intergenic |
TCAAATTCCATCGAAACTGC+TGG | 0.476260 | 2.1:+67879445 | MS.gene002720:CDS |
TGAGTAGATTACAGGTGAAT+CGG | 0.477333 | 2.1:+67879872 | MS.gene002720:intron |
CACTAACCCTTCATACAGAT+TGG | 0.481736 | 2.1:-67882553 | None:intergenic |
TCCATGGCACACGAGTGCTC+AGG | 0.482276 | 2.1:-67879625 | None:intergenic |
AGTTTCGATGGAATTTGAAA+TGG | 0.483543 | 2.1:-67879440 | None:intergenic |
TTTGCCTCCCCTTTCAACAT+TGG | 0.485066 | 2.1:+67882717 | MS.gene002720:CDS |
ACTGCCAGCGTACAAGGATT+CGG | 0.487783 | 2.1:-67881629 | None:intergenic |
GGCTAGTGGTGCTCGTATTG+AGG | 0.489703 | 2.1:+67880295 | MS.gene002720:CDS |
CGCAGCTGAAAACTTGATCC+AGG | 0.491497 | 2.1:+67883487 | MS.gene002720:CDS |
GAACCTTGATAAGAGCATCT+TGG | 0.491683 | 2.1:-67879411 | None:intergenic |
TATGCCACCAATCTGTATGA+AGG | 0.492296 | 2.1:+67882546 | MS.gene002720:CDS |
CTATCACTTTAGATGGAACT+AGG | 0.500719 | 2.1:-67881286 | None:intergenic |
GTTGTTCCTGCTAATGCTGT+TGG | 0.501305 | 2.1:+67882745 | MS.gene002720:CDS |
GCTAGTGCAGGAGCAGTAGC+AGG | 0.508108 | 2.1:-67881688 | None:intergenic |
TACTATTAAACGTATGAGGC+AGG | 0.509364 | 2.1:+67880274 | MS.gene002720:CDS |
CTCTGATCATAAGCTAGTGC+AGG | 0.512172 | 2.1:-67881700 | None:intergenic |
TATAACTCGATGCTTGGCAC+CGG | 0.515549 | 2.1:-67879308 | None:intergenic |
ATGTGGCCATTATGAATGCC+TGG | 0.522054 | 2.1:-67883505 | None:intergenic |
CATGGTGGTTATGTGGATAC+AGG | 0.523407 | 2.1:+67880119 | MS.gene002720:CDS |
CAACTCATTGGGAAGGGAGG+AGG | 0.523568 | 2.1:+67880251 | MS.gene002720:CDS |
AATAGCTCTGAAAGCTTATG+TGG | 0.523582 | 2.1:-67883522 | None:intergenic |
TACAAAATTGTCGAATTCCA+TGG | 0.525918 | 2.1:-67879641 | None:intergenic |
GAAGGAATGATGATGCTATG+AGG | 0.526800 | 2.1:-67879990 | None:intergenic |
ATGATGCCCCGGTTTCAATC+CGG | 0.528596 | 2.1:+67881261 | MS.gene002720:CDS |
ATTCAATAAGGCAAGAGAGT+AGG | 0.530776 | 2.1:+67879257 | MS.gene002720:CDS |
CCCTGAGCACTCGTGTGCCA+TGG | 0.530794 | 2.1:+67879624 | MS.gene002720:CDS |
TTCTGAGTCCAAATCTTACC+GGG | 0.531101 | 2.1:+67883421 | MS.gene002720:CDS |
ACTTTGCCAACAGCATTAGC+AGG | 0.532411 | 2.1:-67882751 | None:intergenic |
ACTGGAAGCGGAACTGGACT+GGG | 0.533872 | 2.1:+67881724 | MS.gene002720:CDS |
AAGATGGAAGACAATGGCTA+TGG | 0.537979 | 2.1:+67882510 | MS.gene002720:intron |
CAACCATCTCCAATGTTGAA+AGG | 0.539641 | 2.1:-67882726 | None:intergenic |
GGTTCCGAATCCTTGTACGC+TGG | 0.542711 | 2.1:+67881625 | MS.gene002720:CDS |
TGCCCAAGATGCTCTTATCA+AGG | 0.543619 | 2.1:+67879408 | MS.gene002720:CDS |
CTAGGAGCCGGATTGAAACC+GGG | 0.543700 | 2.1:-67881268 | None:intergenic |
TAAGACAAGGACAAATATCA+AGG | 0.546196 | 2.1:+67879579 | MS.gene002720:CDS |
CAATTTATGATTTAGGTGGT+CGG | 0.548215 | 2.1:+67881505 | MS.gene002720:intron |
GGGTGTATTATAGGAAGAAG+TGG | 0.549990 | 2.1:+67881308 | MS.gene002720:CDS |
AAGGAATGATGATGCTATGA+GGG | 0.550130 | 2.1:-67879989 | None:intergenic |
CAAAATGGCAGACTGACTAG+AGG | 0.551495 | 2.1:-67879518 | None:intergenic |
TGTGAATGACAGAGATGAAA+GGG | 0.552868 | 2.1:+67879150 | MS.gene002720:CDS |
AGACTGGAAACTACCGGAAG+GGG | 0.553413 | 2.1:-67880167 | None:intergenic |
CTAGCTTATGATCAGAGGAC+TGG | 0.554134 | 2.1:+67881706 | MS.gene002720:CDS |
TGAAATTCGGAAGAGAACTA+AGG | 0.556012 | 2.1:+67881343 | MS.gene002720:CDS |
TAATGCTGTTGGCAAAGTGA+TGG | 0.559250 | 2.1:+67882756 | MS.gene002720:CDS |
CTTTAGATGGAACTAGGAGC+CGG | 0.559827 | 2.1:-67881280 | None:intergenic |
TAGTTCCATCTAAAGTGATA+GGG | 0.560839 | 2.1:+67881288 | MS.gene002720:CDS |
ATAACTCGATGCTTGGCACC+GGG | 0.562363 | 2.1:-67879307 | None:intergenic |
TATTGAGGTTGATGATTCCA+AGG | 0.562957 | 2.1:+67880310 | MS.gene002720:CDS |
AGATCTGCATGGTGGTTATG+TGG | 0.563392 | 2.1:+67880112 | MS.gene002720:CDS |
TATGATCAGAGGACTGGAAG+CGG | 0.568724 | 2.1:+67881712 | MS.gene002720:CDS |
TCTTATTTCTGGCACATCTG+AGG | 0.574532 | 2.1:+67883457 | MS.gene002720:CDS |
GGAATCTCCAGCAGTTTCGA+TGG | 0.575806 | 2.1:-67879452 | None:intergenic |
GGACAACTCATTGGGAAGGG+AGG | 0.575999 | 2.1:+67880248 | MS.gene002720:CDS |
TGTCCCCATTACGGCCTCCA+CGG | 0.578224 | 2.1:-67879108 | None:intergenic |
CAGACTGACTAGAGGGAACA+AGG | 0.580495 | 2.1:-67879510 | None:intergenic |
TAGAACAGCTTCAACAGCTA+CGG | 0.588245 | 2.1:-67881210 | None:intergenic |
ATGCCACCAATCTGTATGAA+GGG | 0.589132 | 2.1:+67882547 | MS.gene002720:CDS |
GAACTTCCTATTTACCCACC+TGG | 0.589486 | 2.1:+67880014 | MS.gene002720:CDS |
TGAATAATAGGATCTGAAGC+TGG | 0.590925 | 2.1:-67880047 | None:intergenic |
AATTGGACAACTCATTGGGA+AGG | 0.591139 | 2.1:+67880244 | MS.gene002720:CDS |
ACAAGGATTCGGAACCTATG+TGG | 0.591359 | 2.1:-67881618 | None:intergenic |
GTGTGAATGACAGAGATGAA+AGG | 0.593622 | 2.1:+67879149 | MS.gene002720:CDS |
GGGTAAATAGGAAGTTCAGA+AGG | 0.594127 | 2.1:-67880008 | None:intergenic |
GAGGTACTATTAAACGTATG+AGG | 0.594506 | 2.1:+67880270 | MS.gene002720:CDS |
CAGATCCTATTATTCAACCT+AGG | 0.594804 | 2.1:+67880054 | MS.gene002720:CDS |
AAATATCAAGGTCGTTCCGA+AGG | 0.595110 | 2.1:+67879591 | MS.gene002720:CDS |
TAGGGCAAAAGTCAAGGTTG+TGG | 0.596912 | 2.1:+67879276 | MS.gene002720:CDS |
GCACCAAGACTGGAAACTAC+CGG | 0.597828 | 2.1:-67880173 | None:intergenic |
AGGGTGAATTGATTGCGTAT+AGG | 0.598226 | 2.1:+67879176 | MS.gene002720:CDS |
ATCTCCAATGTTGAAAGGGG+AGG | 0.598988 | 2.1:-67882721 | None:intergenic |
AGAGAGTAGGGCAAAAGTCA+AGG | 0.601117 | 2.1:+67879270 | MS.gene002720:CDS |
AATCACTATAACTGCAACAG+AGG | 0.601299 | 2.1:+67880352 | MS.gene002720:CDS |
TAACCCTTCATACAGATTGG+TGG | 0.602844 | 2.1:-67882550 | None:intergenic |
TCAGATAGTCTTGAGACTAA+GGG | 0.603595 | 2.1:+67881558 | MS.gene002720:CDS |
TCTGGTACAGTTGTGTCAAG+AGG | 0.604685 | 2.1:-67879963 | None:intergenic |
TGACAATGATGAACTCGTTG+AGG | 0.606153 | 2.1:+67881409 | MS.gene002720:CDS |
AAATGATGAAGATGATGCCC+CGG | 0.608073 | 2.1:+67881250 | MS.gene002720:CDS |
CCATGGCACACGAGTGCTCA+GGG | 0.611829 | 2.1:-67879624 | None:intergenic |
GTTGGCAAAGTGATGGGTAA+AGG | 0.611894 | 2.1:+67882763 | MS.gene002720:CDS |
GGAATTGAAGACAGCATAGG+TGG | 0.612008 | 2.1:-67881667 | None:intergenic |
ATTGACCATAATCGCCACAT+AGG | 0.613100 | 2.1:+67881604 | MS.gene002720:CDS |
GAAGCTGGATACAGTCCACC+AGG | 0.615044 | 2.1:-67880032 | None:intergenic |
TTATGGATATGATTCTTACT+CGG | 0.616429 | 2.1:+67881768 | MS.gene002720:CDS |
TGACAGAGATGAAAGGGACA+AGG | 0.617034 | 2.1:+67879156 | MS.gene002720:CDS |
CAGAGAGACCATGGTGACCG+TGG | 0.618198 | 2.1:+67879091 | MS.gene002720:CDS |
AATGCTGTTGGCAAAGTGAT+GGG | 0.618239 | 2.1:+67882757 | MS.gene002720:CDS |
GCAGGAATTGAAGACAGCAT+AGG | 0.618305 | 2.1:-67881670 | None:intergenic |
AAGACTGGAAACTACCGGAA+GGG | 0.619727 | 2.1:-67880168 | None:intergenic |
ATTGGACAACTCATTGGGAA+GGG | 0.621727 | 2.1:+67880245 | MS.gene002720:CDS |
AGCACCTATAAGTTGAGGAA+AGG | 0.622127 | 2.1:-67880078 | None:intergenic |
TACGGCCTCCACGGTCACCA+TGG | 0.625024 | 2.1:-67879099 | None:intergenic |
CTGCACTAGCTTATGATCAG+AGG | 0.628076 | 2.1:+67881701 | MS.gene002720:CDS |
CAAGAGGAATGTCCTCCTTG+GGG | 0.628228 | 2.1:-67879947 | None:intergenic |
TAAGAGCAACGCGATCACCC+CGG | 0.629315 | 2.1:-67883439 | None:intergenic |
TGACCGTGGAGGCCGTAATG+GGG | 0.631804 | 2.1:+67879105 | MS.gene002720:CDS |
ATAAGTTGAGGAAAGGACCT+AGG | 0.632078 | 2.1:-67880071 | None:intergenic |
ACCATCTCCAATGTTGAAAG+GGG | 0.635751 | 2.1:-67882724 | None:intergenic |
CTTCCTATTTACCCACCTGG+TGG | 0.636019 | 2.1:+67880017 | MS.gene002720:CDS |
ATGTGGATACAGGAAATACA+TGG | 0.636048 | 2.1:+67880129 | MS.gene002720:CDS |
ACAACTATGCAAGATCTGCA+TGG | 0.645066 | 2.1:+67880101 | MS.gene002720:CDS |
AAAATGGCAGACTGACTAGA+GGG | 0.645250 | 2.1:-67879517 | None:intergenic |
AAACGTATGAGGCAGGCTAG+TGG | 0.646776 | 2.1:+67880281 | MS.gene002720:CDS |
GATAGTCTTGAGACTAAGGG+AGG | 0.652244 | 2.1:+67881561 | MS.gene002720:CDS |
GTTGTAGCACCTATAAGTTG+AGG | 0.653650 | 2.1:-67880083 | None:intergenic |
GGCAAAGTGATGGGTAAAGG+TGG | 0.655798 | 2.1:+67882766 | MS.gene002720:CDS |
GACAGAGATGAAAGGGACAA+GGG | 0.656109 | 2.1:+67879157 | MS.gene002720:CDS |
TTGTAAAAGATGGAAGACAA+TGG | 0.656868 | 2.1:+67882504 | MS.gene002720:intron |
TAGGAGCCGGATTGAAACCG+GGG | 0.657756 | 2.1:-67881267 | None:intergenic |
AAATCTAGCCAATATCAGGA+AGG | 0.661054 | 2.1:+67882792 | MS.gene002720:CDS |
AAGAGGAATGTCCTCCTTGG+GGG | 0.667322 | 2.1:-67879946 | None:intergenic |
AATCGTCAACAGAGAGACCA+TGG | 0.668757 | 2.1:+67879082 | MS.gene002720:CDS |
CAAGACTGGAAACTACCGGA+AGG | 0.673422 | 2.1:-67880169 | None:intergenic |
AACAACTGAGAGTTAAGACA+AGG | 0.676479 | 2.1:+67879566 | MS.gene002720:CDS |
CTGGATACAGTCCACCAGGT+GGG | 0.681311 | 2.1:-67880028 | None:intergenic |
AGAGACCATGGTGACCGTGG+AGG | 0.689385 | 2.1:+67879094 | MS.gene002720:CDS |
TCTGAGTCCAAATCTTACCG+GGG | 0.700612 | 2.1:+67883422 | MS.gene002720:CDS |
AGGAATGATGATGCTATGAG+GGG | 0.702663 | 2.1:-67879988 | None:intergenic |
GCTGGATACAGTCCACCAGG+TGG | 0.717990 | 2.1:-67880029 | None:intergenic |
GGAAGGGGAGATGAGTACAG+AGG | 0.743871 | 2.1:-67880152 | None:intergenic |
ACTATGCAAGATCTGCATGG+TGG | 0.749688 | 2.1:+67880104 | MS.gene002720:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTATCTATTTTAAATTTTT+TGG | - | chr2.1:67883188-67883207 | None:intergenic | 10.0% |
!! | AAAAATATTTCCTTCATTTA+TGG | - | chr2.1:67880585-67880604 | None:intergenic | 15.0% |
!! | AACAATATAGAAGTAATAAT+AGG | - | chr2.1:67880395-67880414 | None:intergenic | 15.0% |
!! | AGAATAAAAGAAACATAAAT+AGG | - | chr2.1:67882832-67882851 | None:intergenic | 15.0% |
!! | GAAAAGTTATAAATTCAATA+AGG | + | chr2.1:67879245-67879264 | MS.gene002720:CDS | 15.0% |
!! | GATTTATCTTAAATATTTCT+TGG | + | chr2.1:67880424-67880443 | MS.gene002720:intron | 15.0% |
!!! | ACTGTACATTTAATTTAAAA+CGG | + | chr2.1:67882127-67882146 | MS.gene002720:intron | 15.0% |
!!! | ATCAGAATTTTAAATCTTTT+AGG | + | chr2.1:67880784-67880803 | MS.gene002720:intron | 15.0% |
!!! | ATCTATTTTAAATTTTTTGG+CGG | - | chr2.1:67883185-67883204 | None:intergenic | 15.0% |
!!! | TCAGAATTTTAAATCTTTTA+GGG | + | chr2.1:67880785-67880804 | MS.gene002720:intron | 15.0% |
!!! | TTTATGTTTCTTTTATTCTA+TGG | + | chr2.1:67882833-67882852 | MS.gene002720:intron | 15.0% |
!! | AATATTGAAGAAAAGAAATG+AGG | - | chr2.1:67881068-67881087 | None:intergenic | 20.0% |
!! | AGATAACACTAAAAATTTGA+TGG | - | chr2.1:67883124-67883143 | None:intergenic | 20.0% |
!! | ATTCAAAACAAAATAGGAAA+AGG | - | chr2.1:67881117-67881136 | None:intergenic | 20.0% |
!! | CAAGTTAATATGTATGATTA+TGG | - | chr2.1:67879683-67879702 | None:intergenic | 20.0% |
!! | CTATTAAGTGTTAATATACT+TGG | + | chr2.1:67881920-67881939 | MS.gene002720:intron | 20.0% |
!! | TACAATTAATTCTTCAGATT+GGG | - | chr2.1:67880201-67880220 | None:intergenic | 20.0% |
!! | TTACAATTAATTCTTCAGAT+TGG | - | chr2.1:67880202-67880221 | None:intergenic | 20.0% |
!! | TTATAATGTGGTTAATCTAT+AGG | + | chr2.1:67880952-67880971 | MS.gene002720:intron | 20.0% |
!!! | ATCTTCTATTTTTAGTCATT+TGG | + | chr2.1:67882200-67882219 | MS.gene002720:intron | 20.0% |
!!! | ATTAAATGTGTATTTTATGC+GGG | + | chr2.1:67883360-67883379 | MS.gene002720:intron | 20.0% |
!!! | ATTTTCAACTCTTGATTATA+TGG | + | chr2.1:67882452-67882471 | MS.gene002720:intron | 20.0% |
!!! | CATTAAATGTGTATTTTATG+CGG | + | chr2.1:67883359-67883378 | MS.gene002720:intron | 20.0% |
!!! | CTGTACATTTAATTTAAAAC+GGG | + | chr2.1:67882128-67882147 | MS.gene002720:intron | 20.0% |
!!! | GCTTTTTCAATTTATGATTT+AGG | + | chr2.1:67881498-67881517 | MS.gene002720:intron | 20.0% |
!!! | TCTTCTATTTTTAGTCATTT+GGG | + | chr2.1:67882201-67882220 | MS.gene002720:intron | 20.0% |
!!! | TTGTTGCTTTATTTATAATG+TGG | + | chr2.1:67880940-67880959 | MS.gene002720:intron | 20.0% |
!!! | TTTTCAATTTATGATTTAGG+TGG | + | chr2.1:67881501-67881520 | MS.gene002720:intron | 20.0% |
! | AAAATAGATACACACACAAA+GGG | + | chr2.1:67883196-67883215 | MS.gene002720:intron | 25.0% |
! | AACAAAAACAAAATAGAGAC+AGG | - | chr2.1:67882414-67882433 | None:intergenic | 25.0% |
! | AATGAATAGACAGAAAGAAA+AGG | - | chr2.1:67882635-67882654 | None:intergenic | 25.0% |
! | AGTAAGAATCATATCCATAA+TGG | - | chr2.1:67881768-67881787 | None:intergenic | 25.0% |
! | ATGAATAGACAGAAAGAAAA+GGG | - | chr2.1:67882634-67882653 | None:intergenic | 25.0% |
! | ATTATGTCAGAATGTCAATA+AGG | + | chr2.1:67880863-67880882 | MS.gene002720:intron | 25.0% |
! | GAAAACAACACTGAAAAAAA+CGG | - | chr2.1:67883076-67883095 | None:intergenic | 25.0% |
! | GTGCAATCATAAATGAAATT+CGG | + | chr2.1:67881330-67881349 | MS.gene002720:CDS | 25.0% |
! | TAAAATAGATACACACACAA+AGG | + | chr2.1:67883195-67883214 | MS.gene002720:intron | 25.0% |
! | TAAACTTAAATGGAACTTCA+AGG | - | chr2.1:67880549-67880568 | None:intergenic | 25.0% |
! | TAGACAATTTGATTGAGTTT+AGG | + | chr2.1:67882053-67882072 | MS.gene002720:intron | 25.0% |
! | TATCTTAAATATTTCTTGGC+TGG | + | chr2.1:67880428-67880447 | MS.gene002720:intron | 25.0% |
! | TATGAATGAAATGTATGAGT+CGG | - | chr2.1:67880525-67880544 | None:intergenic | 25.0% |
! | TGTATAATTTACAGCTGATT+TGG | + | chr2.1:67882607-67882626 | MS.gene002720:intron | 25.0% |
! | TTATGGATATGATTCTTACT+CGG | + | chr2.1:67881768-67881787 | MS.gene002720:CDS | 25.0% |
!! | GTATTCCTTTTCATCAAAAA+AGG | + | chr2.1:67881800-67881819 | MS.gene002720:intron | 25.0% |
!! | GTGTTAACTTAGATATTTTC+TGG | + | chr2.1:67879793-67879812 | MS.gene002720:intron | 25.0% |
!! | TTAAATGTGTATTTTATGCG+GGG | + | chr2.1:67883361-67883380 | MS.gene002720:intron | 25.0% |
!! | TTTCTTTTATTCTATGGAAG+AGG | + | chr2.1:67882839-67882858 | MS.gene002720:intron | 25.0% |
!! | TTTTGCTTCTTTGTAAAAGA+TGG | + | chr2.1:67882494-67882513 | MS.gene002720:intron | 25.0% |
!!! | AACAATTTTTTGTCACGTTA+AGG | + | chr2.1:67879330-67879349 | MS.gene002720:CDS | 25.0% |
!!! | ATTTTAAATCTTTTAGGGTG+AGG | + | chr2.1:67880790-67880809 | MS.gene002720:intron | 25.0% |
!!! | CATTTAGTCTTTTGTTAAAC+TGG | + | chr2.1:67882651-67882670 | MS.gene002720:intron | 25.0% |
!!! | GTAAACCTTTTTTGATGAAA+AGG | - | chr2.1:67881808-67881827 | None:intergenic | 25.0% |
!!! | TATTTTAAATTTTTTGGCGG+AGG | - | chr2.1:67883182-67883201 | None:intergenic | 25.0% |
!!! | TGCTATTTAGTTTTGCTATT+TGG | + | chr2.1:67882948-67882967 | MS.gene002720:intron | 25.0% |
!!! | TTAACTTGCTATTGAAATGA+TGG | + | chr2.1:67879695-67879714 | MS.gene002720:intron | 25.0% |
!!! | TTTTAAATCTTTTAGGGTGA+GGG | + | chr2.1:67880791-67880810 | MS.gene002720:intron | 25.0% |
AAAGTGATAGGGTGTATTAT+AGG | + | chr2.1:67881299-67881318 | MS.gene002720:CDS | 30.0% | |
AAGGAGAATTGATGCTTATT+TGG | + | chr2.1:67880709-67880728 | MS.gene002720:intron | 30.0% | |
AATTGAAGTTATACTAGCAG+TGG | + | chr2.1:67882170-67882189 | MS.gene002720:intron | 30.0% | |
AATTGTTATAACTCGATGCT+TGG | - | chr2.1:67879317-67879336 | None:intergenic | 30.0% | |
ACAAAATTGGACAACTCATT+GGG | + | chr2.1:67880240-67880259 | MS.gene002720:CDS | 30.0% | |
ACCATATTGCAGTTAACATA+TGG | - | chr2.1:67880754-67880773 | None:intergenic | 30.0% | |
ACTTGACTTTCTTCATCATA+TGG | + | chr2.1:67882087-67882106 | MS.gene002720:intron | 30.0% | |
AGTTAAATAGTGAATGCTGA+TGG | + | chr2.1:67882276-67882295 | MS.gene002720:intron | 30.0% | |
AGTTTCGATGGAATTTGAAA+TGG | - | chr2.1:67879443-67879462 | None:intergenic | 30.0% | |
ATATCATTGAGCATAGTCAT+TGG | - | chr2.1:67882008-67882027 | None:intergenic | 30.0% | |
ATCATCTCAAATACATGACA+TGG | + | chr2.1:67882917-67882936 | MS.gene002720:intron | 30.0% | |
ATGTCAATAAGGTATATGTC+AGG | + | chr2.1:67880874-67880893 | MS.gene002720:intron | 30.0% | |
CAATTTATGATTTAGGTGGT+CGG | + | chr2.1:67881505-67881524 | MS.gene002720:intron | 30.0% | |
CAGCACATTCAAAACAAAAT+AGG | - | chr2.1:67881123-67881142 | None:intergenic | 30.0% | |
CTTATTCTTTCGTTTCTTCT+CGG | - | chr2.1:67879476-67879495 | None:intergenic | 30.0% | |
CTTTCTTCATCATATGGATA+AGG | + | chr2.1:67882093-67882112 | MS.gene002720:intron | 30.0% | |
GAAATAATTCACGGTTTGAA+AGG | + | chr2.1:67882863-67882882 | MS.gene002720:intron | 30.0% | |
GGAGGATGTATTGAAAAATA+AGG | + | chr2.1:67881579-67881598 | MS.gene002720:CDS | 30.0% | |
GTTAAAAAAAACTGAGGTCA+TGG | - | chr2.1:67880503-67880522 | None:intergenic | 30.0% | |
TAAGACAAGGACAAATATCA+AGG | + | chr2.1:67879579-67879598 | MS.gene002720:CDS | 30.0% | |
TACAAAATTGTCGAATTCCA+TGG | - | chr2.1:67879644-67879663 | None:intergenic | 30.0% | |
TATATACTTGAGGAGAAATG+TGG | - | chr2.1:67881877-67881896 | None:intergenic | 30.0% | |
TATCATTGAGCATAGTCATT+GGG | - | chr2.1:67882007-67882026 | None:intergenic | 30.0% | |
TCATACACATGATAGGATAA+AGG | + | chr2.1:67882977-67882996 | MS.gene002720:intron | 30.0% | |
TCATTGTCATCTGCATATTT+AGG | - | chr2.1:67881398-67881417 | None:intergenic | 30.0% | |
TCCATATGTTAACTGCAATA+TGG | + | chr2.1:67880750-67880769 | MS.gene002720:intron | 30.0% | |
TCCTCAAGTATATATGTCTA+GGG | + | chr2.1:67881883-67881902 | MS.gene002720:intron | 30.0% | |
TCGTGTAATATTAGTTGCTT+GGG | + | chr2.1:67881971-67881990 | MS.gene002720:intron | 30.0% | |
TCGTTTATACACATTTGACA+TGG | + | chr2.1:67883285-67883304 | MS.gene002720:intron | 30.0% | |
TTCATGATCAACTTTATGCT+TGG | + | chr2.1:67881019-67881038 | MS.gene002720:intron | 30.0% | |
TTGTAAAAGATGGAAGACAA+TGG | + | chr2.1:67882504-67882523 | MS.gene002720:intron | 30.0% | |
TTGTTACCAGTTAATTACTG+TGG | + | chr2.1:67880609-67880628 | MS.gene002720:intron | 30.0% | |
! | AGTCTTTTGTTAAACTGGTT+GGG | + | chr2.1:67882656-67882675 | MS.gene002720:intron | 30.0% |
! | ATCAATTCTCCTTGTTATGA+GGG | - | chr2.1:67880662-67880681 | None:intergenic | 30.0% |
! | CTTGCTCTTTTAAATGTCAA+TGG | + | chr2.1:67883242-67883261 | MS.gene002720:intron | 30.0% |
! | CTTTATGCTTGGTTTACTTT+TGG | + | chr2.1:67881030-67881049 | MS.gene002720:intron | 30.0% |
! | GCATAAAGTTGATCATGAAA+TGG | - | chr2.1:67881018-67881037 | None:intergenic | 30.0% |
! | GGAATTCGACAATTTTGTAT+TGG | + | chr2.1:67879645-67879664 | MS.gene002720:CDS | 30.0% |
! | GTTGTTTCAATTCAGATTTC+AGG | + | chr2.1:67883383-67883402 | MS.gene002720:intron | 30.0% |
! | GTTTTCATTGAGTAGATTAC+AGG | + | chr2.1:67879864-67879883 | MS.gene002720:intron | 30.0% |
! | TAGTCTTTTGTTAAACTGGT+TGG | + | chr2.1:67882655-67882674 | MS.gene002720:intron | 30.0% |
! | TAGTTCCATCTAAAGTGATA+GGG | + | chr2.1:67881288-67881307 | MS.gene002720:CDS | 30.0% |
! | TGATGCGCTTTAAACTTAAA+TGG | - | chr2.1:67880559-67880578 | None:intergenic | 30.0% |
! | TTTCTGTAAGTTTTCACACT+AGG | + | chr2.1:67880903-67880922 | MS.gene002720:intron | 30.0% |
!! | GGTTTACTTTTGGTGAATTT+TGG | + | chr2.1:67881040-67881059 | MS.gene002720:intron | 30.0% |
!! | TACTTGGTCTTATTTGTTGT+TGG | + | chr2.1:67881936-67881955 | MS.gene002720:intron | 30.0% |
!! | TTCGACAATTTTGTATTGGT+AGG | + | chr2.1:67879649-67879668 | MS.gene002720:intron | 30.0% |
!!! | CTATTTTTAGTCATTTGGGT+TGG | + | chr2.1:67882205-67882224 | MS.gene002720:intron | 30.0% |
!!! | TTTTCGAGTACGATAGAAAA+TGG | + | chr2.1:67882375-67882394 | MS.gene002720:intron | 30.0% |
AAATCTAGCCAATATCAGGA+AGG | + | chr2.1:67882792-67882811 | MS.gene002720:CDS | 35.0% | |
AACAACTGAGAGTTAAGACA+AGG | + | chr2.1:67879566-67879585 | MS.gene002720:CDS | 35.0% | |
AACCATCTCCAATGTTGAAA+GGG | - | chr2.1:67882728-67882747 | None:intergenic | 35.0% | |
AATCACTATAACTGCAACAG+AGG | + | chr2.1:67880352-67880371 | MS.gene002720:CDS | 35.0% | |
ACACTCCCAATAACTTCATT+CGG | - | chr2.1:67879211-67879230 | None:intergenic | 35.0% | |
ACCCTAGACATATATACTTG+AGG | - | chr2.1:67881887-67881906 | None:intergenic | 35.0% | |
AGAACTAACCTTCCTGATAT+TGG | - | chr2.1:67882803-67882822 | None:intergenic | 35.0% | |
AGGCAAACGATGTCTAATAA+AGG | - | chr2.1:67882704-67882723 | None:intergenic | 35.0% | |
ATACACCCTATCACTTTAGA+TGG | - | chr2.1:67881296-67881315 | None:intergenic | 35.0% | |
ATGTGGATACAGGAAATACA+TGG | + | chr2.1:67880129-67880148 | MS.gene002720:CDS | 35.0% | |
ATTCAATAAGGCAAGAGAGT+AGG | + | chr2.1:67879257-67879276 | MS.gene002720:CDS | 35.0% | |
CAGATCCTATTATTCAACCT+AGG | + | chr2.1:67880054-67880073 | MS.gene002720:CDS | 35.0% | |
CATTCATAATGGCCACATAA+AGG | + | chr2.1:67883510-67883529 | MS.gene002720:CDS | 35.0% | |
CGAGAAGAAACGAAAGAATA+AGG | + | chr2.1:67879474-67879493 | MS.gene002720:CDS | 35.0% | |
CTATCACTTTAGATGGAACT+AGG | - | chr2.1:67881289-67881308 | None:intergenic | 35.0% | |
CTCCTCAAGTATATATGTCT+AGG | + | chr2.1:67881882-67881901 | MS.gene002720:intron | 35.0% | |
CTCGTGTAATATTAGTTGCT+TGG | + | chr2.1:67881970-67881989 | MS.gene002720:intron | 35.0% | |
CTTAACTCTCAGTTGTTTGA+TGG | - | chr2.1:67879563-67879582 | None:intergenic | 35.0% | |
GACAAAATTGGACAACTCAT+TGG | + | chr2.1:67880239-67880258 | MS.gene002720:CDS | 35.0% | |
GAGTCGGTTAAAAAAAACTG+AGG | - | chr2.1:67880509-67880528 | None:intergenic | 35.0% | |
GGAAGAGGTGAAATAATTCA+CGG | + | chr2.1:67882854-67882873 | MS.gene002720:intron | 35.0% | |
GTGTTAACTGCAGATAAACT+TGG | + | chr2.1:67880974-67880993 | MS.gene002720:intron | 35.0% | |
TACTATTAAACGTATGAGGC+AGG | + | chr2.1:67880274-67880293 | MS.gene002720:CDS | 35.0% | |
TATGCCCGAATGAAGTTATT+GGG | + | chr2.1:67879203-67879222 | MS.gene002720:CDS | 35.0% | |
TGAAATTCGGAAGAGAACTA+AGG | + | chr2.1:67881343-67881362 | MS.gene002720:CDS | 35.0% | |
TGAATCGGAAGCTGTAAAAA+GGG | + | chr2.1:67879887-67879906 | MS.gene002720:CDS | 35.0% | |
TGAGTAGATTACAGGTGAAT+CGG | + | chr2.1:67879872-67879891 | MS.gene002720:intron | 35.0% | |
TGTGAATGACAGAGATGAAA+GGG | + | chr2.1:67879150-67879169 | MS.gene002720:CDS | 35.0% | |
TTCAATAAGGCAAGAGAGTA+GGG | + | chr2.1:67879258-67879277 | MS.gene002720:CDS | 35.0% | |
TTGCAGTTAACATATGGACT+CGG | - | chr2.1:67880748-67880767 | None:intergenic | 35.0% | |
TTGGCGGAGGTTTATATTTA+TGG | - | chr2.1:67883169-67883188 | None:intergenic | 35.0% | |
TTGTCACGTTAAGGATAAGA+AGG | + | chr2.1:67879339-67879358 | MS.gene002720:CDS | 35.0% | |
TTTCTGAGTCCAAATCTTAC+CGG | + | chr2.1:67883420-67883439 | MS.gene002720:CDS | 35.0% | |
! | AAGGAATGATGATGCTATGA+GGG | - | chr2.1:67879992-67880011 | None:intergenic | 35.0% |
! | AAGGACCTAGGTTGAATAAT+AGG | - | chr2.1:67880062-67880081 | None:intergenic | 35.0% |
! | AGTTGTCCAATTTTGTCAGA+AGG | - | chr2.1:67880236-67880255 | None:intergenic | 35.0% |
! | CATCAATTCTCCTTGTTATG+AGG | - | chr2.1:67880663-67880682 | None:intergenic | 35.0% |
! | CATTCTTCTAGAAGCCATTA+TGG | + | chr2.1:67881751-67881770 | MS.gene002720:CDS | 35.0% |
! | CTAGTTCCATCTAAAGTGAT+AGG | + | chr2.1:67881287-67881306 | MS.gene002720:CDS | 35.0% |
! | GAGGTACTATTAAACGTATG+AGG | + | chr2.1:67880270-67880289 | MS.gene002720:CDS | 35.0% |
! | GTTGTCCAATTTTGTCAGAA+GGG | - | chr2.1:67880235-67880254 | None:intergenic | 35.0% |
! | TCAATTCTCCTTGTTATGAG+GGG | - | chr2.1:67880661-67880680 | None:intergenic | 35.0% |
! | TCAGATAGTCTTGAGACTAA+GGG | + | chr2.1:67881558-67881577 | MS.gene002720:CDS | 35.0% |
! | TGAATAATAGGATCTGAAGC+TGG | - | chr2.1:67880050-67880069 | None:intergenic | 35.0% |
! | TTCAGATAGTCTTGAGACTA+AGG | + | chr2.1:67881557-67881576 | MS.gene002720:CDS | 35.0% |
!! | AACCTTGATAAGAGCATCTT+GGG | - | chr2.1:67879413-67879432 | None:intergenic | 35.0% |
!! | GAAGTTATTGGGAGTGTTAT+TGG | + | chr2.1:67879214-67879233 | MS.gene002720:CDS | 35.0% |
!! | GATGTGGATTAGGATATGAT+AGG | - | chr2.1:67883008-67883027 | None:intergenic | 35.0% |
!! | GATTTTTGTTGTCCCCATTA+CGG | - | chr2.1:67879120-67879139 | None:intergenic | 35.0% |
!! | TATTGAGGTTGATGATTCCA+AGG | + | chr2.1:67880310-67880329 | MS.gene002720:CDS | 35.0% |
!!! | TTGTTTTGAATGTGCTGTTC+TGG | + | chr2.1:67881126-67881145 | MS.gene002720:intron | 35.0% |
AAAATGGCAGACTGACTAGA+GGG | - | chr2.1:67879520-67879539 | None:intergenic | 40.0% | |
AAATATCAAGGTCGTTCCGA+AGG | + | chr2.1:67879591-67879610 | MS.gene002720:CDS | 40.0% | |
AAATGATGAAGATGATGCCC+CGG | + | chr2.1:67881250-67881269 | MS.gene002720:CDS | 40.0% | |
AAGATGGAAGACAATGGCTA+TGG | + | chr2.1:67882510-67882529 | MS.gene002720:intron | 40.0% | |
AATGCTGTTGGCAAAGTGAT+GGG | + | chr2.1:67882757-67882776 | MS.gene002720:CDS | 40.0% | |
AATTGGACAACTCATTGGGA+AGG | + | chr2.1:67880244-67880263 | MS.gene002720:CDS | 40.0% | |
ACAACTATGCAAGATCTGCA+TGG | + | chr2.1:67880101-67880120 | MS.gene002720:CDS | 40.0% | |
ACACATTTGACATGGCATCA+TGG | + | chr2.1:67883293-67883312 | MS.gene002720:intron | 40.0% | |
ACCATCTCCAATGTTGAAAG+GGG | - | chr2.1:67882727-67882746 | None:intergenic | 40.0% | |
ACGAGTCCACAGTAATTAAC+TGG | - | chr2.1:67880618-67880637 | None:intergenic | 40.0% | |
AGGGTGAATTGATTGCGTAT+AGG | + | chr2.1:67879176-67879195 | MS.gene002720:CDS | 40.0% | |
AGGTCCTTTCCTCAACTTAT+AGG | + | chr2.1:67880074-67880093 | MS.gene002720:CDS | 40.0% | |
ATAGATACACACACAAAGGG+AGG | + | chr2.1:67883199-67883218 | MS.gene002720:intron | 40.0% | |
ATGCCACCAATCTGTATGAA+GGG | + | chr2.1:67882547-67882566 | MS.gene002720:CDS | 40.0% | |
ATGTCAATGGCCAAAGTTTC+AGG | + | chr2.1:67883255-67883274 | MS.gene002720:intron | 40.0% | |
ATGTGCATGTGTAATGAGCA+TGG | - | chr2.1:67883339-67883358 | None:intergenic | 40.0% | |
ATTGACCATAATCGCCACAT+AGG | + | chr2.1:67881604-67881623 | MS.gene002720:CDS | 40.0% | |
ATTGGACAACTCATTGGGAA+GGG | + | chr2.1:67880245-67880264 | MS.gene002720:CDS | 40.0% | |
CAACCATCTCCAATGTTGAA+AGG | - | chr2.1:67882729-67882748 | None:intergenic | 40.0% | |
CACTAACCCTTCATACAGAT+TGG | - | chr2.1:67882556-67882575 | None:intergenic | 40.0% | |
CACTCCCAATAACTTCATTC+GGG | - | chr2.1:67879210-67879229 | None:intergenic | 40.0% | |
CGCATCAGATCCATAAATGA+AGG | + | chr2.1:67880572-67880591 | MS.gene002720:intron | 40.0% | |
CTATGCCCGAATGAAGTTAT+TGG | + | chr2.1:67879202-67879221 | MS.gene002720:CDS | 40.0% | |
CTTGATCCAGGCATTCATAA+TGG | + | chr2.1:67883499-67883518 | MS.gene002720:CDS | 40.0% | |
GAGCAAATCTAGCCAATATC+AGG | + | chr2.1:67882788-67882807 | MS.gene002720:CDS | 40.0% | |
GGGACAACAAAAATCAGAAG+AGG | + | chr2.1:67879125-67879144 | MS.gene002720:CDS | 40.0% | |
GGGTAAATAGGAAGTTCAGA+AGG | - | chr2.1:67880011-67880030 | None:intergenic | 40.0% | |
GGGTGTATTATAGGAAGAAG+TGG | + | chr2.1:67881308-67881327 | MS.gene002720:CDS | 40.0% | |
GTGAATCGGAAGCTGTAAAA+AGG | + | chr2.1:67879886-67879905 | MS.gene002720:CDS | 40.0% | |
GTGTGAATGACAGAGATGAA+AGG | + | chr2.1:67879149-67879168 | MS.gene002720:CDS | 40.0% | |
GTTGTAGCACCTATAAGTTG+AGG | - | chr2.1:67880086-67880105 | None:intergenic | 40.0% | |
TAACCCTTCATACAGATTGG+TGG | - | chr2.1:67882553-67882572 | None:intergenic | 40.0% | |
TAATGCTGTTGGCAAAGTGA+TGG | + | chr2.1:67882756-67882775 | MS.gene002720:CDS | 40.0% | |
TAGAACAGCTTCAACAGCTA+CGG | - | chr2.1:67881213-67881232 | None:intergenic | 40.0% | |
TAGATACACACACAAAGGGA+GGG | + | chr2.1:67883200-67883219 | MS.gene002720:intron | 40.0% | |
TATGCCACCAATCTGTATGA+AGG | + | chr2.1:67882546-67882565 | MS.gene002720:CDS | 40.0% | |
TCAAATTCCATCGAAACTGC+TGG | + | chr2.1:67879445-67879464 | MS.gene002720:CDS | 40.0% | |
TGACAATGATGAACTCGTTG+AGG | + | chr2.1:67881409-67881428 | MS.gene002720:CDS | 40.0% | |
TTCTGAGTCCAAATCTTACC+GGG | + | chr2.1:67883421-67883440 | MS.gene002720:CDS | 40.0% | |
! | AAGTTTTCACACTAGGAAGC+AGG | + | chr2.1:67880910-67880929 | MS.gene002720:intron | 40.0% |
! | AGCACCTATAAGTTGAGGAA+AGG | - | chr2.1:67880081-67880100 | None:intergenic | 40.0% |
! | AGGAATGATGATGCTATGAG+GGG | - | chr2.1:67879991-67880010 | None:intergenic | 40.0% |
! | ATAAGTTGAGGAAAGGACCT+AGG | - | chr2.1:67880074-67880093 | None:intergenic | 40.0% |
! | GAAGGAATGATGATGCTATG+AGG | - | chr2.1:67879993-67880012 | None:intergenic | 40.0% |
!! | GAACCTTGATAAGAGCATCT+TGG | - | chr2.1:67879414-67879433 | None:intergenic | 40.0% |
!! | GGGAGTGTTATTGGTAAGAA+TGG | + | chr2.1:67879223-67879242 | MS.gene002720:CDS | 40.0% |
!! | TCTTATTTCTGGCACATCTG+AGG | + | chr2.1:67883457-67883476 | MS.gene002720:CDS | 40.0% |
!!! | AGTCAGTCTGCCATTTTGAT+TGG | + | chr2.1:67879523-67879542 | MS.gene002720:CDS | 40.0% |
AAACAGACTTCAGACAGTGC+TGG | - | chr2.1:67882356-67882375 | None:intergenic | 45.0% | |
AAGACTGGAAACTACCGGAA+GGG | - | chr2.1:67880171-67880190 | None:intergenic | 45.0% | |
AAGGTTGTGGATCCATTTCC+CGG | + | chr2.1:67879289-67879308 | MS.gene002720:CDS | 45.0% | |
AATCGTCAACAGAGAGACCA+TGG | + | chr2.1:67879082-67879101 | MS.gene002720:CDS | 45.0% | |
ACAAGGATTCGGAACCTATG+TGG | - | chr2.1:67881621-67881640 | None:intergenic | 45.0% | |
ACATTCATCATGACGAGCCT+TGG | - | chr2.1:67880330-67880349 | None:intergenic | 45.0% | |
ACTATGCAAGATCTGCATGG+TGG | + | chr2.1:67880104-67880123 | MS.gene002720:CDS | 45.0% | |
ACTTTGCCAACAGCATTAGC+AGG | - | chr2.1:67882754-67882773 | None:intergenic | 45.0% | |
AGAGAGTAGGGCAAAAGTCA+AGG | + | chr2.1:67879270-67879289 | MS.gene002720:CDS | 45.0% | |
AGATACACACACAAAGGGAG+GGG | + | chr2.1:67883201-67883220 | MS.gene002720:intron | 45.0% | |
AGATCTGCATGGTGGTTATG+TGG | + | chr2.1:67880112-67880131 | MS.gene002720:CDS | 45.0% | |
ATCTCCAATGTTGAAAGGGG+AGG | - | chr2.1:67882724-67882743 | None:intergenic | 45.0% | |
ATGATGCTATGAGGGGTTTC+TGG | - | chr2.1:67879984-67880003 | None:intergenic | 45.0% | |
ATGTGGCCATTATGAATGCC+TGG | - | chr2.1:67883508-67883527 | None:intergenic | 45.0% | |
CAAAATGGCAGACTGACTAG+AGG | - | chr2.1:67879521-67879540 | None:intergenic | 45.0% | |
CACACACACACGTTACAGAA+TGG | - | chr2.1:67879756-67879775 | None:intergenic | 45.0% | |
CATGGTGGTTATGTGGATAC+AGG | + | chr2.1:67880119-67880138 | MS.gene002720:CDS | 45.0% | |
CATGTACAAATTCTCCCCCA+AGG | + | chr2.1:67879932-67879951 | MS.gene002720:CDS | 45.0% | |
CGAGAGAATGCCTGAAACTT+TGG | - | chr2.1:67883268-67883287 | None:intergenic | 45.0% | |
CTAGCTTATGATCAGAGGAC+TGG | + | chr2.1:67881706-67881725 | MS.gene002720:CDS | 45.0% | |
CTCTGATCATAAGCTAGTGC+AGG | - | chr2.1:67881703-67881722 | None:intergenic | 45.0% | |
CTGTGCCCTTCTGACAAAAT+TGG | + | chr2.1:67880227-67880246 | MS.gene002720:CDS | 45.0% | |
CTTCAACAGCTACGGATTTC+AGG | - | chr2.1:67881205-67881224 | None:intergenic | 45.0% | |
CTTTAGATGGAACTAGGAGC+CGG | - | chr2.1:67881283-67881302 | None:intergenic | 45.0% | |
GAACTTCCTATTTACCCACC+TGG | + | chr2.1:67880014-67880033 | MS.gene002720:CDS | 45.0% | |
GACAGAGATGAAAGGGACAA+GGG | + | chr2.1:67879157-67879176 | MS.gene002720:CDS | 45.0% | |
GCAGGAATTGAAGACAGCAT+AGG | - | chr2.1:67881673-67881692 | None:intergenic | 45.0% | |
GGAATTGAAGACAGCATAGG+TGG | - | chr2.1:67881670-67881689 | None:intergenic | 45.0% | |
GTCCATTCGATGGTCAAGAT+AGG | - | chr2.1:67883037-67883056 | None:intergenic | 45.0% | |
GTCCTATCTTGACCATCGAA+TGG | + | chr2.1:67883032-67883051 | MS.gene002720:intron | 45.0% | |
GTTGTTCCTGCTAATGCTGT+TGG | + | chr2.1:67882745-67882764 | MS.gene002720:CDS | 45.0% | |
TAGGGCAAAAGTCAAGGTTG+TGG | + | chr2.1:67879276-67879295 | MS.gene002720:CDS | 45.0% | |
TATAACTCGATGCTTGGCAC+CGG | - | chr2.1:67879311-67879330 | None:intergenic | 45.0% | |
TATGATCAGAGGACTGGAAG+CGG | + | chr2.1:67881712-67881731 | MS.gene002720:CDS | 45.0% | |
TCAAGAGGAATGTCCTCCTT+GGG | - | chr2.1:67879951-67879970 | None:intergenic | 45.0% | |
TCCCCTTTCAACATTGGAGA+TGG | + | chr2.1:67882723-67882742 | MS.gene002720:CDS | 45.0% | |
TCTGAGTCCAAATCTTACCG+GGG | + | chr2.1:67883422-67883441 | MS.gene002720:CDS | 45.0% | |
TCTGGTACAGTTGTGTCAAG+AGG | - | chr2.1:67879966-67879985 | None:intergenic | 45.0% | |
TGACAGAGATGAAAGGGACA+AGG | + | chr2.1:67879156-67879175 | MS.gene002720:CDS | 45.0% | |
TGCCCAAGATGCTCTTATCA+AGG | + | chr2.1:67879408-67879427 | MS.gene002720:CDS | 45.0% | |
TTTGCCTCCCCTTTCAACAT+TGG | + | chr2.1:67882717-67882736 | MS.gene002720:CDS | 45.0% | |
! | ATTCTCCTTGTTATGAGGGG+TGG | - | chr2.1:67880658-67880677 | None:intergenic | 45.0% |
! | CTGCACTAGCTTATGATCAG+AGG | + | chr2.1:67881701-67881720 | MS.gene002720:CDS | 45.0% |
! | GATAGTCTTGAGACTAAGGG+AGG | + | chr2.1:67881561-67881580 | MS.gene002720:CDS | 45.0% |
! | GATCGCGTTGCTCTTATTTC+TGG | + | chr2.1:67883446-67883465 | MS.gene002720:CDS | 45.0% |
!! | GTTGGCAAAGTGATGGGTAA+AGG | + | chr2.1:67882763-67882782 | MS.gene002720:CDS | 45.0% |
!!! | ATCTTTTAGGGTGAGGGACA+TGG | + | chr2.1:67880797-67880816 | MS.gene002720:intron | 45.0% |
!!! | CATTTTGATTGGCAAGGCTG+GGG | + | chr2.1:67879534-67879553 | MS.gene002720:CDS | 45.0% |
!!! | CCATTTTGATTGGCAAGGCT+GGG | + | chr2.1:67879533-67879552 | MS.gene002720:CDS | 45.0% |
!!! | GTCTGCCATTTTGATTGGCA+AGG | + | chr2.1:67879528-67879547 | MS.gene002720:CDS | 45.0% |
AAACGTATGAGGCAGGCTAG+TGG | + | chr2.1:67880281-67880300 | MS.gene002720:CDS | 50.0% | |
AACAGAACTGCCAGCGTACA+AGG | - | chr2.1:67881638-67881657 | None:intergenic | 50.0% | |
AAGAGGAATGTCCTCCTTGG+GGG | - | chr2.1:67879949-67879968 | None:intergenic | 50.0% | |
ACTAGGAGCCGGATTGAAAC+CGG | - | chr2.1:67881272-67881291 | None:intergenic | 50.0% | |
ACTGCCAGCGTACAAGGATT+CGG | - | chr2.1:67881632-67881651 | None:intergenic | 50.0% | |
AGACTGGAAACTACCGGAAG+GGG | - | chr2.1:67880170-67880189 | None:intergenic | 50.0% | |
AGTCCACCAGGTGGGTAAAT+AGG | - | chr2.1:67880023-67880042 | None:intergenic | 50.0% | |
ATAACTCGATGCTTGGCACC+GGG | - | chr2.1:67879310-67879329 | None:intergenic | 50.0% | |
ATGATGCCCCGGTTTCAATC+CGG | + | chr2.1:67881261-67881280 | MS.gene002720:CDS | 50.0% | |
CAAGACTGGAAACTACCGGA+AGG | - | chr2.1:67880172-67880191 | None:intergenic | 50.0% | |
CAAGAGGAATGTCCTCCTTG+GGG | - | chr2.1:67879950-67879969 | None:intergenic | 50.0% | |
CAGACTGACTAGAGGGAACA+AGG | - | chr2.1:67879513-67879532 | None:intergenic | 50.0% | |
CCCAGCCTTGCCAATCAAAA+TGG | - | chr2.1:67879536-67879555 | None:intergenic | 50.0% | |
CGATGGTCAAGATAGGACGA+GGG | - | chr2.1:67883030-67883049 | None:intergenic | 50.0% | |
CGCAGCTGAAAACTTGATCC+AGG | + | chr2.1:67883487-67883506 | MS.gene002720:CDS | 50.0% | |
CGGAACCTATGTGGCGATTA+TGG | - | chr2.1:67881612-67881631 | None:intergenic | 50.0% | |
CTTCCGGTAGTTTCCAGTCT+TGG | + | chr2.1:67880170-67880189 | MS.gene002720:CDS | 50.0% | |
CTTCCTATTTACCCACCTGG+TGG | + | chr2.1:67880017-67880036 | MS.gene002720:CDS | 50.0% | |
GATACACACACAAAGGGAGG+GGG | + | chr2.1:67883202-67883221 | MS.gene002720:intron | 50.0% | |
GCACCAAGACTGGAAACTAC+CGG | - | chr2.1:67880176-67880195 | None:intergenic | 50.0% | |
GCATCTTGGGCAGCACATAA+AGG | - | chr2.1:67879400-67879419 | None:intergenic | 50.0% | |
GGAATCTCCAGCAGTTTCGA+TGG | - | chr2.1:67879455-67879474 | None:intergenic | 50.0% | |
GTACAAATTCTCCCCCAAGG+AGG | + | chr2.1:67879935-67879954 | MS.gene002720:CDS | 50.0% | |
GTCAAGAGGAATGTCCTCCT+TGG | - | chr2.1:67879952-67879971 | None:intergenic | 50.0% | |
GTGCGCGTCATACACATGAT+AGG | + | chr2.1:67882970-67882989 | MS.gene002720:intron | 50.0% | |
TAGGACGAGGGATGTGGATT+AGG | - | chr2.1:67883018-67883037 | None:intergenic | 50.0% | |
TCAAGATAGGACGAGGGATG+TGG | - | chr2.1:67883024-67883043 | None:intergenic | 50.0% | |
TCGATGGTCAAGATAGGACG+AGG | - | chr2.1:67883031-67883050 | None:intergenic | 50.0% | |
TCTGTACTCATCTCCCCTTC+CGG | + | chr2.1:67880154-67880173 | MS.gene002720:CDS | 50.0% | |
!! | AGATTGGGAAGCACCAAGAC+TGG | - | chr2.1:67880186-67880205 | None:intergenic | 50.0% |
!! | GGCAAAGTGATGGGTAAAGG+TGG | + | chr2.1:67882766-67882785 | MS.gene002720:CDS | 50.0% |
!!! | GCCATTTTGATTGGCAAGGC+TGG | + | chr2.1:67879532-67879551 | MS.gene002720:CDS | 50.0% |
ACTGGAAGCGGAACTGGACT+GGG | + | chr2.1:67881724-67881743 | MS.gene002720:CDS | 55.0% | |
CAACTCATTGGGAAGGGAGG+AGG | + | chr2.1:67880251-67880270 | MS.gene002720:CDS | 55.0% | |
CTAGGAGCCGGATTGAAACC+GGG | - | chr2.1:67881271-67881290 | None:intergenic | 55.0% | |
CTGGATACAGTCCACCAGGT+GGG | - | chr2.1:67880031-67880050 | None:intergenic | 55.0% | |
CTGTGCCACCCCTCATAACA+AGG | + | chr2.1:67880650-67880669 | MS.gene002720:intron | 55.0% | |
GAAGCTGGATACAGTCCACC+AGG | - | chr2.1:67880035-67880054 | None:intergenic | 55.0% | |
GCGATCACCCCGGTAAGATT+TGG | - | chr2.1:67883432-67883451 | None:intergenic | 55.0% | |
GGAAGGGGAGATGAGTACAG+AGG | - | chr2.1:67880155-67880174 | None:intergenic | 55.0% | |
GGACAACTCATTGGGAAGGG+AGG | + | chr2.1:67880248-67880267 | MS.gene002720:CDS | 55.0% | |
GGCTAGTGGTGCTCGTATTG+AGG | + | chr2.1:67880295-67880314 | MS.gene002720:CDS | 55.0% | |
GGTTCCGAATCCTTGTACGC+TGG | + | chr2.1:67881625-67881644 | MS.gene002720:CDS | 55.0% | |
TAAGAGCAACGCGATCACCC+CGG | - | chr2.1:67883442-67883461 | None:intergenic | 55.0% | |
TAGGAGCCGGATTGAAACCG+GGG | - | chr2.1:67881270-67881289 | None:intergenic | 55.0% | |
TCAGGGTCAGCTGCATCCTT+CGG | - | chr2.1:67879610-67879629 | None:intergenic | 55.0% | |
AGAGACCATGGTGACCGTGG+AGG | + | chr2.1:67879094-67879113 | MS.gene002720:CDS | 60.0% | |
CAGAGAGACCATGGTGACCG+TGG | + | chr2.1:67879091-67879110 | MS.gene002720:CDS | 60.0% | |
CAGAGGACTGGAAGCGGAAC+TGG | + | chr2.1:67881718-67881737 | MS.gene002720:CDS | 60.0% | |
CCATGGCACACGAGTGCTCA+GGG | - | chr2.1:67879627-67879646 | None:intergenic | 60.0% | |
GACTGGAAGCGGAACTGGAC+TGG | + | chr2.1:67881723-67881742 | MS.gene002720:CDS | 60.0% | |
GCTAGTGCAGGAGCAGTAGC+AGG | - | chr2.1:67881691-67881710 | None:intergenic | 60.0% | |
GCTGGATACAGTCCACCAGG+TGG | - | chr2.1:67880032-67880051 | None:intergenic | 60.0% | |
GGGAGGGGGAGAGAGAGATA+TGG | + | chr2.1:67883216-67883235 | MS.gene002720:intron | 60.0% | |
GTGACCGTGGAGGCCGTAAT+GGG | + | chr2.1:67879104-67879123 | MS.gene002720:CDS | 60.0% | |
TCCATGGCACACGAGTGCTC+AGG | - | chr2.1:67879628-67879647 | None:intergenic | 60.0% | |
TGACCGTGGAGGCCGTAATG+GGG | + | chr2.1:67879105-67879124 | MS.gene002720:CDS | 60.0% | |
TGTCCCCATTACGGCCTCCA+CGG | - | chr2.1:67879111-67879130 | None:intergenic | 60.0% | |
! | CGATGCTTGGCACCGGGAAA+TGG | - | chr2.1:67879304-67879323 | None:intergenic | 60.0% |
CCCTGAGCACTCGTGTGCCA+TGG | + | chr2.1:67879624-67879643 | MS.gene002720:CDS | 65.0% | |
GGTGACCGTGGAGGCCGTAA+TGG | + | chr2.1:67879103-67879122 | MS.gene002720:CDS | 65.0% | |
TACGGCCTCCACGGTCACCA+TGG | - | chr2.1:67879102-67879121 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 67879061 | 67883529 | 67879061 | ID=MS.gene002720 |
chr2.1 | mRNA | 67879061 | 67883529 | 67879061 | ID=MS.gene002720.t1;Parent=MS.gene002720 |
chr2.1 | exon | 67879061 | 67879666 | 67879061 | ID=MS.gene002720.t1.exon1;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67879061 | 67879666 | 67879061 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
chr2.1 | exon | 67879879 | 67880373 | 67879879 | ID=MS.gene002720.t1.exon2;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67879879 | 67880373 | 67879879 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
chr2.1 | exon | 67881191 | 67881430 | 67881191 | ID=MS.gene002720.t1.exon3;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67881191 | 67881430 | 67881191 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
chr2.1 | exon | 67881520 | 67881789 | 67881520 | ID=MS.gene002720.t1.exon4;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67881520 | 67881789 | 67881520 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
chr2.1 | exon | 67882513 | 67882568 | 67882513 | ID=MS.gene002720.t1.exon5;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67882513 | 67882568 | 67882513 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
chr2.1 | exon | 67882711 | 67882813 | 67882711 | ID=MS.gene002720.t1.exon6;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67882711 | 67882813 | 67882711 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
chr2.1 | exon | 67883398 | 67883529 | 67883398 | ID=MS.gene002720.t1.exon7;Parent=MS.gene002720.t1 |
chr2.1 | CDS | 67883398 | 67883529 | 67883398 | ID=cds.MS.gene002720.t1;Parent=MS.gene002720.t1 |
Gene Sequence |
Protein sequence |