Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05834.t1 | XP_024633137.1 | 98.7 | 594 | 8 | 0 | 40 | 633 | 39 | 632 | 0.00E+00 | 1137.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05834.t1 | P58223 | 51.1 | 607 | 249 | 13 | 41 | 633 | 34 | 606 | 2.8e-146 | 520.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05834.t1 | A0A396J6S5 | 98.7 | 594 | 8 | 0 | 40 | 633 | 39 | 632 | 0.0e+00 | 1137.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene073734 | MS.gene05834 | PPI |
MS.gene05834 | MS.gene002720 | PPI |
MS.gene64804 | MS.gene05834 | PPI |
MS.gene004399 | MS.gene05834 | PPI |
MS.gene05834 | MS.gene035486 | PPI |
MS.gene52115 | MS.gene05834 | PPI |
MS.gene057667 | MS.gene05834 | PPI |
MS.gene05834 | MS.gene67483 | PPI |
MS.gene040757 | MS.gene05834 | PPI |
MS.gene023324 | MS.gene05834 | PPI |
MS.gene59503 | MS.gene05834 | PPI |
MS.gene08301 | MS.gene05834 | PPI |
MS.gene96254 | MS.gene05834 | PPI |
MS.gene002720 | MS.gene05834 | PPI |
MS.gene34911 | MS.gene05834 | PPI |
MS.gene93333 | MS.gene05834 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05834.t1 | MTR_2g019090 | 98.104 | 633 | 10 | 2 | 1 | 633 | 1 | 631 | 0.0 | 1264 |
MS.gene05834.t1 | MTR_2g019090 | 98.142 | 592 | 10 | 1 | 1 | 592 | 1 | 591 | 0.0 | 1190 |
MS.gene05834.t1 | MTR_2g019090 | 22.472 | 356 | 230 | 10 | 310 | 631 | 38 | 381 | 4.80e-15 | 79.0 |
MS.gene05834.t1 | MTR_6g012630 | 32.062 | 577 | 304 | 18 | 5 | 550 | 11 | 530 | 2.51e-71 | 240 |
MS.gene05834.t1 | MTR_6g012630 | 28.571 | 329 | 180 | 11 | 312 | 617 | 45 | 341 | 6.38e-22 | 100 |
MS.gene05834.t1 | MTR_6g012630 | 32.062 | 577 | 304 | 18 | 5 | 550 | 11 | 530 | 2.86e-71 | 240 |
MS.gene05834.t1 | MTR_6g012630 | 28.571 | 329 | 180 | 11 | 312 | 617 | 45 | 341 | 9.14e-22 | 99.8 |
MS.gene05834.t1 | MTR_6g012630 | 33.624 | 458 | 248 | 14 | 5 | 447 | 11 | 427 | 5.22e-62 | 213 |
MS.gene05834.t1 | MTR_6g012630 | 28.571 | 329 | 180 | 11 | 312 | 617 | 45 | 341 | 4.30e-22 | 100 |
MS.gene05834.t1 | MTR_7g011080 | 32.787 | 549 | 301 | 17 | 23 | 548 | 21 | 524 | 8.58e-62 | 215 |
MS.gene05834.t1 | MTR_7g011080 | 27.492 | 331 | 180 | 9 | 312 | 613 | 47 | 346 | 1.45e-17 | 86.7 |
MS.gene05834.t1 | MTR_4g093650 | 28.346 | 635 | 380 | 17 | 36 | 631 | 14 | 612 | 3.10e-57 | 204 |
MS.gene05834.t1 | MTR_4g093650 | 30.000 | 190 | 117 | 5 | 27 | 215 | 250 | 424 | 2.13e-16 | 83.2 |
MS.gene05834.t1 | MTR_3g110650 | 28.462 | 650 | 381 | 15 | 43 | 632 | 32 | 657 | 2.59e-55 | 199 |
MS.gene05834.t1 | MTR_3g091800 | 26.557 | 610 | 396 | 15 | 44 | 633 | 64 | 641 | 4.90e-54 | 196 |
MS.gene05834.t1 | MTR_3g091800 | 27.714 | 350 | 202 | 11 | 298 | 618 | 57 | 384 | 1.08e-18 | 90.5 |
MS.gene05834.t1 | MTR_5g031720 | 27.063 | 606 | 370 | 14 | 43 | 630 | 39 | 590 | 1.49e-50 | 185 |
MS.gene05834.t1 | MTR_5g031720 | 23.708 | 329 | 203 | 10 | 35 | 351 | 267 | 559 | 2.06e-11 | 67.4 |
MS.gene05834.t1 | MTR_4g008080 | 28.955 | 335 | 195 | 6 | 148 | 479 | 101 | 395 | 5.02e-39 | 152 |
MS.gene05834.t1 | MTR_4g008080 | 26.904 | 197 | 117 | 5 | 41 | 237 | 225 | 394 | 2.38e-13 | 73.6 |
MS.gene05834.t1 | MTR_4g008080 | 22.293 | 314 | 178 | 9 | 313 | 613 | 17 | 277 | 1.03e-11 | 68.2 |
MS.gene05834.t1 | MTR_2g009650 | 28.942 | 463 | 285 | 13 | 43 | 471 | 48 | 500 | 2.98e-38 | 151 |
MS.gene05834.t1 | MTR_2g009650 | 27.123 | 365 | 208 | 14 | 299 | 620 | 40 | 389 | 9.24e-17 | 84.7 |
MS.gene05834.t1 | MTR_2g009650 | 29.947 | 187 | 115 | 3 | 30 | 215 | 318 | 489 | 5.61e-14 | 75.9 |
MS.gene05834.t1 | MTR_2g009650 | 37.864 | 103 | 61 | 2 | 532 | 631 | 660 | 762 | 6.93e-11 | 65.9 |
MS.gene05834.t1 | MTR_7g115340 | 25.215 | 349 | 224 | 7 | 313 | 630 | 46 | 388 | 2.51e-24 | 106 |
MS.gene05834.t1 | MTR_7g115340 | 24.234 | 359 | 205 | 9 | 45 | 368 | 49 | 375 | 1.43e-16 | 83.2 |
MS.gene05834.t1 | MTR_7g115340 | 25.215 | 349 | 224 | 7 | 313 | 630 | 114 | 456 | 5.22e-24 | 106 |
MS.gene05834.t1 | MTR_7g115340 | 24.234 | 359 | 205 | 9 | 45 | 368 | 117 | 443 | 3.87e-16 | 82.0 |
MS.gene05834.t1 | MTR_1g090773 | 27.829 | 327 | 178 | 11 | 316 | 626 | 38 | 322 | 2.45e-20 | 93.2 |
MS.gene05834.t1 | MTR_1g070380 | 25.397 | 378 | 189 | 11 | 313 | 630 | 164 | 508 | 4.48e-18 | 88.6 |
MS.gene05834.t1 | MTR_1g070380 | 29.121 | 182 | 111 | 4 | 45 | 224 | 167 | 332 | 9.77e-17 | 84.3 |
MS.gene05834.t1 | MTR_1g070380 | 25.464 | 377 | 189 | 11 | 313 | 630 | 164 | 507 | 6.46e-18 | 87.8 |
MS.gene05834.t1 | MTR_1g070380 | 29.121 | 182 | 110 | 4 | 45 | 224 | 167 | 331 | 1.65e-16 | 83.6 |
MS.gene05834.t1 | MTR_4g127380 | 26.957 | 345 | 209 | 10 | 315 | 630 | 45 | 375 | 8.54e-15 | 77.4 |
MS.gene05834.t1 | MTR_4g127380 | 30.220 | 182 | 109 | 6 | 45 | 224 | 46 | 211 | 9.42e-11 | 64.7 |
MS.gene05834.t1 | MTR_7g080630 | 25.150 | 334 | 169 | 7 | 28 | 349 | 73 | 337 | 1.20e-14 | 76.6 |
MS.gene05834.t1 | MTR_7g080630 | 30.769 | 182 | 111 | 4 | 303 | 469 | 89 | 270 | 1.17e-13 | 73.6 |
MS.gene05834.t1 | MTR_7g080630 | 28.016 | 257 | 154 | 6 | 22 | 266 | 67 | 304 | 5.38e-14 | 73.9 |
MS.gene05834.t1 | MTR_7g080630 | 30.769 | 182 | 111 | 4 | 303 | 469 | 89 | 270 | 1.00e-13 | 72.8 |
MS.gene05834.t1 | MTR_7g080630 | 30.769 | 182 | 111 | 4 | 303 | 469 | 89 | 270 | 5.57e-14 | 73.6 |
MS.gene05834.t1 | MTR_7g080630 | 28.216 | 241 | 147 | 5 | 28 | 256 | 73 | 299 | 7.75e-14 | 73.2 |
MS.gene05834.t1 | MTR_1g090773 | 28.195 | 266 | 138 | 11 | 376 | 626 | 12 | 239 | 2.88e-13 | 70.5 |
MS.gene05834.t1 | MTR_2g038020 | 25.714 | 350 | 213 | 10 | 313 | 630 | 69 | 403 | 2.74e-12 | 69.7 |
MS.gene05834.t1 | MTR_5g049770 | 26.293 | 232 | 145 | 7 | 403 | 628 | 28 | 239 | 4.07e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05834.t1 | AT5G46190 | 56.300 | 627 | 244 | 16 | 25 | 633 | 30 | 644 | 0.0 | 626 |
MS.gene05834.t1 | AT5G46190 | 56.300 | 627 | 244 | 16 | 25 | 633 | 30 | 644 | 0.0 | 626 |
MS.gene05834.t1 | AT5G46190 | 56.300 | 627 | 244 | 16 | 25 | 633 | 30 | 644 | 0.0 | 626 |
MS.gene05834.t1 | AT5G46190 | 52.530 | 672 | 244 | 17 | 25 | 633 | 30 | 689 | 0.0 | 602 |
MS.gene05834.t1 | AT4G18375 | 49.923 | 647 | 269 | 15 | 1 | 633 | 1 | 606 | 0.0 | 567 |
MS.gene05834.t1 | AT4G18375 | 48.582 | 564 | 240 | 14 | 1 | 550 | 1 | 528 | 1.33e-161 | 474 |
MS.gene05834.t1 | AT4G18375 | 25.434 | 346 | 208 | 12 | 312 | 618 | 33 | 367 | 3.45e-16 | 82.4 |
MS.gene05834.t1 | AT4G18375 | 49.296 | 426 | 170 | 11 | 221 | 633 | 1 | 393 | 2.31e-117 | 355 |
MS.gene05834.t1 | AT5G15270 | 34.728 | 478 | 253 | 15 | 6 | 471 | 17 | 447 | 4.53e-74 | 247 |
MS.gene05834.t1 | AT5G15270 | 28.319 | 339 | 188 | 9 | 312 | 630 | 48 | 351 | 3.50e-28 | 119 |
MS.gene05834.t1 | AT5G15270 | 34.728 | 478 | 253 | 15 | 6 | 471 | 17 | 447 | 1.59e-73 | 246 |
MS.gene05834.t1 | AT5G15270 | 28.319 | 339 | 188 | 9 | 312 | 630 | 48 | 351 | 3.68e-28 | 119 |
MS.gene05834.t1 | AT5G15270 | 34.728 | 478 | 253 | 15 | 6 | 471 | 17 | 447 | 1.59e-73 | 246 |
MS.gene05834.t1 | AT5G15270 | 28.319 | 339 | 188 | 9 | 312 | 630 | 48 | 351 | 3.68e-28 | 119 |
MS.gene05834.t1 | AT1G51580 | 26.780 | 646 | 375 | 15 | 41 | 632 | 17 | 618 | 1.50e-54 | 196 |
MS.gene05834.t1 | AT1G14170 | 30.879 | 489 | 262 | 14 | 4 | 478 | 9 | 435 | 1.31e-50 | 182 |
MS.gene05834.t1 | AT5G53060 | 27.508 | 618 | 379 | 16 | 44 | 632 | 69 | 646 | 6.01e-50 | 184 |
MS.gene05834.t1 | AT5G53060 | 23.902 | 410 | 235 | 15 | 9 | 385 | 284 | 649 | 2.26e-12 | 70.5 |
MS.gene05834.t1 | AT1G14170 | 30.631 | 444 | 244 | 12 | 45 | 478 | 13 | 402 | 2.50e-48 | 176 |
MS.gene05834.t1 | AT1G14170 | 27.528 | 178 | 106 | 3 | 315 | 469 | 12 | 189 | 2.72e-14 | 75.9 |
MS.gene05834.t1 | AT1G14170 | 30.631 | 444 | 244 | 12 | 45 | 478 | 21 | 410 | 2.75e-48 | 176 |
MS.gene05834.t1 | AT1G14170 | 28.022 | 182 | 108 | 3 | 311 | 469 | 16 | 197 | 2.61e-15 | 79.3 |
MS.gene05834.t1 | AT5G53060 | 29.306 | 447 | 269 | 11 | 44 | 472 | 69 | 486 | 4.24e-42 | 160 |
MS.gene05834.t1 | AT5G53060 | 29.412 | 204 | 115 | 4 | 317 | 491 | 71 | 274 | 4.43e-13 | 72.8 |
MS.gene05834.t1 | AT5G53060 | 27.861 | 201 | 117 | 6 | 41 | 236 | 323 | 500 | 2.48e-11 | 67.0 |
MS.gene05834.t1 | AT5G64390 | 29.471 | 397 | 203 | 11 | 311 | 631 | 449 | 844 | 2.30e-35 | 143 |
MS.gene05834.t1 | AT5G64390 | 31.718 | 227 | 123 | 6 | 316 | 515 | 49 | 270 | 1.87e-16 | 84.0 |
MS.gene05834.t1 | AT5G64390 | 29.947 | 187 | 109 | 4 | 44 | 221 | 48 | 221 | 5.76e-14 | 75.9 |
MS.gene05834.t1 | AT2G22600 | 25.000 | 656 | 371 | 19 | 44 | 630 | 26 | 629 | 6.25e-31 | 128 |
MS.gene05834.t1 | AT5G64390 | 29.289 | 239 | 139 | 5 | 311 | 539 | 449 | 667 | 4.51e-24 | 108 |
MS.gene05834.t1 | AT5G64390 | 31.718 | 227 | 123 | 6 | 316 | 515 | 49 | 270 | 1.82e-16 | 84.0 |
MS.gene05834.t1 | AT5G64390 | 29.947 | 187 | 109 | 4 | 44 | 221 | 48 | 221 | 6.88e-14 | 75.5 |
MS.gene05834.t1 | AT5G64390 | 29.289 | 239 | 139 | 5 | 311 | 539 | 449 | 667 | 4.70e-24 | 108 |
MS.gene05834.t1 | AT5G64390 | 31.718 | 227 | 123 | 6 | 316 | 515 | 49 | 270 | 1.79e-16 | 84.0 |
MS.gene05834.t1 | AT5G64390 | 29.947 | 187 | 109 | 4 | 44 | 221 | 48 | 221 | 5.75e-14 | 75.9 |
MS.gene05834.t1 | AT5G64390 | 47.826 | 69 | 36 | 0 | 563 | 631 | 785 | 853 | 9.86e-11 | 65.5 |
MS.gene05834.t1 | AT5G09560 | 25.427 | 468 | 288 | 15 | 41 | 471 | 28 | 471 | 1.06e-23 | 106 |
MS.gene05834.t1 | AT3G04610 | 26.836 | 354 | 209 | 10 | 313 | 630 | 162 | 501 | 1.69e-23 | 105 |
MS.gene05834.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 161 | 488 | 1.17e-17 | 87.0 |
MS.gene05834.t1 | AT3G04610 | 26.836 | 354 | 209 | 10 | 313 | 630 | 162 | 501 | 1.69e-23 | 105 |
MS.gene05834.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 161 | 488 | 1.17e-17 | 87.0 |
MS.gene05834.t1 | AT3G04610 | 26.836 | 354 | 209 | 10 | 313 | 630 | 186 | 525 | 2.07e-23 | 105 |
MS.gene05834.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 185 | 512 | 2.40e-17 | 86.3 |
MS.gene05834.t1 | AT3G04610 | 26.836 | 354 | 209 | 10 | 313 | 630 | 186 | 525 | 2.07e-23 | 105 |
MS.gene05834.t1 | AT3G04610 | 25.000 | 352 | 217 | 10 | 40 | 368 | 185 | 512 | 2.40e-17 | 86.3 |
MS.gene05834.t1 | AT5G04430 | 29.940 | 334 | 174 | 13 | 298 | 619 | 19 | 304 | 1.50e-21 | 96.7 |
MS.gene05834.t1 | AT4G26000 | 27.250 | 400 | 224 | 16 | 269 | 631 | 39 | 408 | 3.84e-19 | 91.3 |
MS.gene05834.t1 | AT5G04430 | 28.614 | 332 | 160 | 13 | 298 | 619 | 19 | 283 | 1.28e-16 | 81.6 |
MS.gene05834.t1 | AT2G03110 | 32.468 | 154 | 92 | 3 | 76 | 223 | 1 | 148 | 2.16e-15 | 74.3 |
MS.gene05834.t1 | AT2G03110 | 32.468 | 154 | 92 | 3 | 76 | 223 | 1 | 148 | 2.16e-15 | 74.3 |
MS.gene05834.t1 | AT2G03110 | 32.468 | 154 | 92 | 3 | 76 | 223 | 1 | 148 | 2.16e-15 | 74.3 |
Find 183 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCGCGTTGCTCTTATTTC+TGG | 0.191956 | 2.3:+67550812 | MS.gene05834:CDS |
CTTCAACAGCTACGGATTTC+AGG | 0.225024 | 2.3:-67548539 | None:intergenic |
GTTGTTTCAATTCAGATTTC+AGG | 0.227860 | 2.3:+67550749 | MS.gene05834:intron |
GAAGTTATTGGGAGTGTTAT+TGG | 0.244583 | 2.3:+67546561 | MS.gene05834:CDS |
GTGAATCGGAAGCTGTAAAA+AGG | 0.256000 | 2.3:+67547223 | MS.gene05834:CDS |
CATTCTTCTAGAAGCCATTA+TGG | 0.270987 | 2.3:+67549089 | MS.gene05834:CDS |
AGATCCTTTCCTCAACTTAT+AGG | 0.276064 | 2.3:+67547411 | MS.gene05834:CDS |
TCATTGTCATCTGCATATTT+AGG | 0.283128 | 2.3:-67548732 | None:intergenic |
CGGAACCTATGTGGCGATTA+TGG | 0.305791 | 2.3:-67548947 | None:intergenic |
CTTATTCTTTCGTTTCTTCT+CGG | 0.307505 | 2.3:-67546820 | None:intergenic |
CTTAACTCTCAGTTGTTTGA+TGG | 0.313059 | 2.3:-67546907 | None:intergenic |
AGTCCACCAGGTGGGTAAAT+AGG | 0.315686 | 2.3:-67547357 | None:intergenic |
ATGATGCTATGAGGGGTTTC+TGG | 0.315690 | 2.3:-67547318 | None:intergenic |
CTGTGCCCTTCTGACAAAAT+TGG | 0.318632 | 2.3:+67547564 | MS.gene05834:CDS |
GCCCAGTCCGGTTCCGCTTC+CGG | 0.323659 | 2.3:-67549063 | None:intergenic |
GCGATCACCCCGGTAAGATT+TGG | 0.324119 | 2.3:-67550795 | None:intergenic |
AAGGATCTAGGTTGAATAAT+AGG | 0.327635 | 2.3:-67547396 | None:intergenic |
CTATGCCCGAATGAAGTTAT+TGG | 0.328595 | 2.3:+67546549 | MS.gene05834:CDS |
GACAAAATTGGACAACTCAT+TGG | 0.328844 | 2.3:+67547576 | MS.gene05834:CDS |
CGAGAAGAAACGAAAGAATA+AGG | 0.329292 | 2.3:+67546821 | MS.gene05834:CDS |
AGAACTAACCTTCCTGATAT+TGG | 0.336256 | 2.3:-67550167 | None:intergenic |
CCCAGCCTTGCCAATCAAAA+TGG | 0.340791 | 2.3:-67546880 | None:intergenic |
ATACACCCTATCACTTTAGA+TGG | 0.351141 | 2.3:-67548630 | None:intergenic |
CTAGTTCCATCTAAAGTGAT+AGG | 0.353687 | 2.3:+67548624 | MS.gene05834:CDS |
TACAATTAATTCTTCAGATT+GGG | 0.362888 | 2.3:-67547535 | None:intergenic |
CGATGCTCGGCACCGGGAAA+TGG | 0.372641 | 2.3:-67546648 | None:intergenic |
CTTCCGGTAGTTTCCAGTCT+TGG | 0.373757 | 2.3:+67547507 | MS.gene05834:CDS |
GTGACCGTGGAGGCCGTAAT+GGG | 0.379052 | 2.3:+67546451 | MS.gene05834:CDS |
AAGGTTGTGGATCCATTTCC+CGG | 0.384862 | 2.3:+67546636 | MS.gene05834:CDS |
CAGAGGACCGGAAGCGGAAC+CGG | 0.388570 | 2.3:+67549056 | MS.gene05834:CDS |
TTTCTGAGTCCAAATCTTAC+CGG | 0.391365 | 2.3:+67550786 | MS.gene05834:CDS |
TTACAATTAATTCTTCAGAT+TGG | 0.393107 | 2.3:-67547536 | None:intergenic |
TATGCCCGAATGAAGTTATT+GGG | 0.403038 | 2.3:+67546550 | MS.gene05834:CDS |
TCAAGAGGAATGTCCTCCTT+GGG | 0.406551 | 2.3:-67547285 | None:intergenic |
GGTGACCGTGGAGGCCGTAA+TGG | 0.409157 | 2.3:+67546450 | MS.gene05834:CDS |
GAAAAGTTATAAATTCAATA+AGG | 0.410877 | 2.3:+67546592 | MS.gene05834:CDS |
TCTGTACTCATCTCCCCTTC+CGG | 0.412310 | 2.3:+67547491 | MS.gene05834:CDS |
GACCGGAAGCGGAACCGGAC+TGG | 0.413509 | 2.3:+67549061 | MS.gene05834:CDS |
ACACTCCCAATAACTTCATT+CGG | 0.414326 | 2.3:-67546555 | None:intergenic |
CTTGATCCAGGCATTCATAA+TGG | 0.415084 | 2.3:+67550865 | MS.gene05834:CDS |
AAAGTGATAGGGTGTATTAT+AGG | 0.415444 | 2.3:+67548636 | MS.gene05834:CDS |
GGGAGTGTTATTGGTAAGAA+TGG | 0.422827 | 2.3:+67546570 | MS.gene05834:CDS |
GTGCAATCATAAATGAAATT+CGG | 0.424587 | 2.3:+67548667 | MS.gene05834:CDS |
AACCTTGATAAGAGCATCTT+GGG | 0.427114 | 2.3:-67546757 | None:intergenic |
GAGCAAATCTAGCCAATATC+AGG | 0.429033 | 2.3:+67550155 | MS.gene05834:CDS |
ACTAGGAGCCGGATTGAAAC+CGG | 0.429446 | 2.3:-67548606 | None:intergenic |
TTCAATAAGGCAAGAGAGTA+GGG | 0.433433 | 2.3:+67546605 | MS.gene05834:CDS |
AGTAAGAATCATATCCATAA+TGG | 0.435755 | 2.3:-67549103 | None:intergenic |
TTCAGATAGTCTTGAGACTA+AGG | 0.437735 | 2.3:+67548895 | MS.gene05834:CDS |
GTCAAGAGGAATGTCCTCCT+TGG | 0.441458 | 2.3:-67547286 | None:intergenic |
ACATTCATCATGACGAGCCT+TGG | 0.443693 | 2.3:-67547664 | None:intergenic |
ACAAAATTGGACAACTCATT+GGG | 0.447697 | 2.3:+67547577 | MS.gene05834:CDS |
TTGTCACGTTAAGGATAAGA+AGG | 0.454912 | 2.3:+67546686 | MS.gene05834:CDS |
CACTCCCAATAACTTCATTC+GGG | 0.455340 | 2.3:-67546554 | None:intergenic |
GCATCTTGGGCAGCACATAA+AGG | 0.456029 | 2.3:-67546744 | None:intergenic |
TCCCCTTTCAACATTGGAGA+TGG | 0.456856 | 2.3:+67550090 | MS.gene05834:CDS |
AGATTGGGAAGCACCAAGAC+TGG | 0.462166 | 2.3:-67547520 | None:intergenic |
AACCATCTCCAATGTTGAAA+GGG | 0.464712 | 2.3:-67550092 | None:intergenic |
ATAAGTTGAGGAAAGGATCT+AGG | 0.471159 | 2.3:-67547408 | None:intergenic |
TCAGGGTCAGCTGCATCCTT+CGG | 0.471291 | 2.3:-67546954 | None:intergenic |
TCAAATTCCATCGAAACTGC+TGG | 0.476260 | 2.3:+67546792 | MS.gene05834:CDS |
ACCGGAAGCGGAACCGGACT+GGG | 0.477048 | 2.3:+67549062 | MS.gene05834:CDS |
TGAGTAGATTACAGGTGAAT+CGG | 0.477333 | 2.3:+67547209 | MS.gene05834:intron |
CACTAACCCTTCATACAGAT+TGG | 0.481736 | 2.3:-67549893 | None:intergenic |
TCCATGGCACACGAGTGCTC+AGG | 0.482276 | 2.3:-67546972 | None:intergenic |
AGTTTCGATGGAATTTGAAA+TGG | 0.483543 | 2.3:-67546787 | None:intergenic |
TTTGCCTCCCCTTTCAACAT+TGG | 0.485066 | 2.3:+67550084 | MS.gene05834:CDS |
TATAACTCGATGCTCGGCAC+CGG | 0.486027 | 2.3:-67546655 | None:intergenic |
AACGGAACTGCCAGCGTACA+AGG | 0.487161 | 2.3:-67548973 | None:intergenic |
ATAACTCGATGCTCGGCACC+GGG | 0.489108 | 2.3:-67546654 | None:intergenic |
GGCTAGTGGTGCTCGTATTG+AGG | 0.489703 | 2.3:+67547632 | MS.gene05834:CDS |
CGCAGCTGAAAACTTGATCC+AGG | 0.491497 | 2.3:+67550853 | MS.gene05834:CDS |
GAACCTTGATAAGAGCATCT+TGG | 0.491683 | 2.3:-67546758 | None:intergenic |
TATGCCACCAATCTGTATGA+AGG | 0.492296 | 2.3:+67549886 | MS.gene05834:CDS |
CTATCACTTTAGATGGAACT+AGG | 0.500719 | 2.3:-67548623 | None:intergenic |
ACTGCCAGCGTACAAGGATT+CGG | 0.501112 | 2.3:-67548967 | None:intergenic |
GTTGTTCCTGCTAATGCTGT+TGG | 0.501305 | 2.3:+67550112 | MS.gene05834:CDS |
GCTAGTGCAGGAGCAGTAGC+AGG | 0.508108 | 2.3:-67549026 | None:intergenic |
TACTATTAAACGTATGAGGC+AGG | 0.509364 | 2.3:+67547611 | MS.gene05834:CDS |
CTCTGATCATAAGCTAGTGC+AGG | 0.512172 | 2.3:-67549038 | None:intergenic |
ATGTGGCCATTATGAATGCC+TGG | 0.522054 | 2.3:-67550871 | None:intergenic |
CATGGTGGTTATGTGGATAC+AGG | 0.523407 | 2.3:+67547456 | MS.gene05834:CDS |
CAACTCATTGGGAAGGGAGG+AGG | 0.523568 | 2.3:+67547588 | MS.gene05834:CDS |
AATAGCTCTGAAAGCTTATG+TGG | 0.523582 | 2.3:-67550888 | None:intergenic |
ATTTGTAGCATGGGTGAAAA+CGG | 0.525695 | 2.3:+67546399 | None:intergenic |
TACAAAATTGTCGAATTCCA+TGG | 0.525918 | 2.3:-67546988 | None:intergenic |
GAAGGAATGATGATGCTATG+AGG | 0.526800 | 2.3:-67547327 | None:intergenic |
AGAAGAATGCATGCCCAGTC+CGG | 0.528560 | 2.3:-67549075 | None:intergenic |
ATGATGCCCCGGTTTCAATC+CGG | 0.528596 | 2.3:+67548598 | MS.gene05834:CDS |
ATTCAATAAGGCAAGAGAGT+AGG | 0.530776 | 2.3:+67546604 | MS.gene05834:CDS |
CCCTGAGCACTCGTGTGCCA+TGG | 0.530794 | 2.3:+67546971 | MS.gene05834:CDS |
TTCTGAGTCCAAATCTTACC+GGG | 0.531101 | 2.3:+67550787 | MS.gene05834:CDS |
ACTTTGCCAACAGCATTAGC+AGG | 0.532411 | 2.3:-67550118 | None:intergenic |
AAGATGGAAGACAATGGCTA+TGG | 0.537979 | 2.3:+67549850 | MS.gene05834:intron |
CAACCATCTCCAATGTTGAA+AGG | 0.539641 | 2.3:-67550093 | None:intergenic |
GGTTCCGAATCCTTGTACGC+TGG | 0.542711 | 2.3:+67548963 | MS.gene05834:CDS |
TGCCCAAGATGCTCTTATCA+AGG | 0.543619 | 2.3:+67546755 | MS.gene05834:CDS |
CTAGGAGCCGGATTGAAACC+GGG | 0.543700 | 2.3:-67548605 | None:intergenic |
TATGATCAGAGGACCGGAAG+CGG | 0.544429 | 2.3:+67549050 | MS.gene05834:CDS |
TAAGACAAGGACAAATATCA+AGG | 0.546196 | 2.3:+67546926 | MS.gene05834:CDS |
CAATTTATGATTTAGGTGGT+CGG | 0.548215 | 2.3:+67548843 | MS.gene05834:intron |
GGGTGTATTATAGGAAGAAG+TGG | 0.549990 | 2.3:+67548645 | MS.gene05834:CDS |
AAGGAATGATGATGCTATGA+GGG | 0.550130 | 2.3:-67547326 | None:intergenic |
CAAAATGGCAGACTGACTAG+AGG | 0.551495 | 2.3:-67546865 | None:intergenic |
TGTGAATGACAGAGATGAAA+GGG | 0.552868 | 2.3:+67546497 | MS.gene05834:CDS |
AGACTGGAAACTACCGGAAG+GGG | 0.553413 | 2.3:-67547504 | None:intergenic |
GCAGGAATTGAAGACAGTAT+AGG | 0.554939 | 2.3:-67549008 | None:intergenic |
TGAAATTCGGAAGAGAACTA+AGG | 0.556012 | 2.3:+67548680 | MS.gene05834:CDS |
AATTGTTATAACTCGATGCT+CGG | 0.557458 | 2.3:-67546661 | None:intergenic |
TAATGCTGTTGGCAAAGTGA+TGG | 0.559250 | 2.3:+67550123 | MS.gene05834:CDS |
CTTTAGATGGAACTAGGAGC+CGG | 0.559827 | 2.3:-67548617 | None:intergenic |
TAGTTCCATCTAAAGTGATA+GGG | 0.560839 | 2.3:+67548625 | MS.gene05834:CDS |
TATTGAGGTTGATGATTCCA+AGG | 0.562957 | 2.3:+67547647 | MS.gene05834:CDS |
AGATCTGCATGGTGGTTATG+TGG | 0.563392 | 2.3:+67547449 | MS.gene05834:CDS |
TCTTATTTCTGGCACATCTG+AGG | 0.574532 | 2.3:+67550823 | MS.gene05834:CDS |
GGAATCTCCAGCAGTTTCGA+TGG | 0.575806 | 2.3:-67546799 | None:intergenic |
GGACAACTCATTGGGAAGGG+AGG | 0.575999 | 2.3:+67547585 | MS.gene05834:CDS |
TGTCCCCATTACGGCCTCCA+CGG | 0.578224 | 2.3:-67546455 | None:intergenic |
TATAGGTGGTGCTGAAAGAA+CGG | 0.578997 | 2.3:-67548991 | None:intergenic |
CAGACTGACTAGAGGGAACA+AGG | 0.580495 | 2.3:-67546857 | None:intergenic |
CTAGCTTATGATCAGAGGAC+CGG | 0.581328 | 2.3:+67549044 | MS.gene05834:CDS |
TAGAACAGCTTCAACAGCTA+CGG | 0.588245 | 2.3:-67548547 | None:intergenic |
ATGCCACCAATCTGTATGAA+GGG | 0.589132 | 2.3:+67549887 | MS.gene05834:CDS |
GAACTTCCTATTTACCCACC+TGG | 0.589486 | 2.3:+67547351 | MS.gene05834:CDS |
TGAATAATAGGATCTGAAGC+TGG | 0.590925 | 2.3:-67547384 | None:intergenic |
AATTGGACAACTCATTGGGA+AGG | 0.591139 | 2.3:+67547581 | MS.gene05834:CDS |
ACAAGGATTCGGAACCTATG+TGG | 0.591359 | 2.3:-67548956 | None:intergenic |
GTGTGAATGACAGAGATGAA+AGG | 0.593622 | 2.3:+67546496 | MS.gene05834:CDS |
GGGTAAATAGGAAGTTCAGA+AGG | 0.594127 | 2.3:-67547345 | None:intergenic |
GAGGTACTATTAAACGTATG+AGG | 0.594506 | 2.3:+67547607 | MS.gene05834:CDS |
AAATATCAAGGTCGTTCCGA+AGG | 0.595110 | 2.3:+67546938 | MS.gene05834:CDS |
TAGGGCAAAAGTCAAGGTTG+TGG | 0.596912 | 2.3:+67546623 | MS.gene05834:CDS |
GCACCAAGACTGGAAACTAC+CGG | 0.597828 | 2.3:-67547510 | None:intergenic |
AGGGTGAATTGATTGCGTAT+AGG | 0.598226 | 2.3:+67546523 | MS.gene05834:CDS |
ATCTCCAATGTTGAAAGGGG+AGG | 0.598988 | 2.3:-67550088 | None:intergenic |
AGAGAGTAGGGCAAAAGTCA+AGG | 0.601117 | 2.3:+67546617 | MS.gene05834:CDS |
AATCACTATAACTGCAACAG+AGG | 0.601299 | 2.3:+67547689 | MS.gene05834:CDS |
TAACCCTTCATACAGATTGG+TGG | 0.602844 | 2.3:-67549890 | None:intergenic |
TCAGATAGTCTTGAGACTAA+GGG | 0.603595 | 2.3:+67548896 | MS.gene05834:CDS |
TCTGGTACAGTTGTGTCAAG+AGG | 0.604685 | 2.3:-67547300 | None:intergenic |
TGACAATGATGAACTCGTTG+AGG | 0.606153 | 2.3:+67548746 | MS.gene05834:CDS |
AAATGATGAAGATGATGCCC+CGG | 0.608073 | 2.3:+67548587 | MS.gene05834:CDS |
CCATGGCACACGAGTGCTCA+GGG | 0.611829 | 2.3:-67546971 | None:intergenic |
GTTGGCAAAGTGATGGGTAA+AGG | 0.611894 | 2.3:+67550130 | MS.gene05834:CDS |
ATTGACCATAATCGCCACAT+AGG | 0.613100 | 2.3:+67548942 | MS.gene05834:CDS |
GAAGCTGGATACAGTCCACC+AGG | 0.615044 | 2.3:-67547369 | None:intergenic |
AGCACCTATAAGTTGAGGAA+AGG | 0.615095 | 2.3:-67547415 | None:intergenic |
TTATGGATATGATTCTTACT+CGG | 0.616429 | 2.3:+67549106 | MS.gene05834:CDS |
TGACAGAGATGAAAGGGACA+AGG | 0.617034 | 2.3:+67546503 | MS.gene05834:CDS |
CAGAGAGACCATGGTGACCG+TGG | 0.618198 | 2.3:+67546438 | MS.gene05834:CDS |
AATGCTGTTGGCAAAGTGAT+GGG | 0.618239 | 2.3:+67550124 | MS.gene05834:CDS |
AAGACTGGAAACTACCGGAA+GGG | 0.619727 | 2.3:-67547505 | None:intergenic |
ATTGGACAACTCATTGGGAA+GGG | 0.621727 | 2.3:+67547582 | MS.gene05834:CDS |
TACGGCCTCCACGGTCACCA+TGG | 0.625024 | 2.3:-67546446 | None:intergenic |
CTGCACTAGCTTATGATCAG+AGG | 0.628076 | 2.3:+67549039 | MS.gene05834:CDS |
CAAGAGGAATGTCCTCCTTG+GGG | 0.628228 | 2.3:-67547284 | None:intergenic |
TAAGAGCAACGCGATCACCC+CGG | 0.629315 | 2.3:-67550805 | None:intergenic |
TGACCGTGGAGGCCGTAATG+GGG | 0.631804 | 2.3:+67546452 | MS.gene05834:CDS |
ACCATCTCCAATGTTGAAAG+GGG | 0.635751 | 2.3:-67550091 | None:intergenic |
CTTCCTATTTACCCACCTGG+TGG | 0.636019 | 2.3:+67547354 | MS.gene05834:CDS |
ATGTGGATACAGGAAATACA+TGG | 0.636048 | 2.3:+67547466 | MS.gene05834:CDS |
GGAATTGAAGACAGTATAGG+TGG | 0.641392 | 2.3:-67549005 | None:intergenic |
ACAACTATGCAAGATCTGCA+TGG | 0.645066 | 2.3:+67547438 | MS.gene05834:CDS |
AAAATGGCAGACTGACTAGA+GGG | 0.645250 | 2.3:-67546864 | None:intergenic |
AAACGTATGAGGCAGGCTAG+TGG | 0.646776 | 2.3:+67547618 | MS.gene05834:CDS |
GATAGTCTTGAGACTAAGGG+AGG | 0.652244 | 2.3:+67548899 | MS.gene05834:CDS |
GTTGTAGCACCTATAAGTTG+AGG | 0.653650 | 2.3:-67547420 | None:intergenic |
GGCAAAGTGATGGGTAAAGG+TGG | 0.655798 | 2.3:+67550133 | MS.gene05834:CDS |
GACAGAGATGAAAGGGACAA+GGG | 0.656109 | 2.3:+67546504 | MS.gene05834:CDS |
TTGTAAAAGATGGAAGACAA+TGG | 0.656868 | 2.3:+67549844 | MS.gene05834:intron |
TAGGAGCCGGATTGAAACCG+GGG | 0.657756 | 2.3:-67548604 | None:intergenic |
AAATCTAGCCAATATCAGGA+AGG | 0.661054 | 2.3:+67550159 | MS.gene05834:CDS |
AAGAGGAATGTCCTCCTTGG+GGG | 0.667322 | 2.3:-67547283 | None:intergenic |
AATCGTCAACAGAGAGACCA+TGG | 0.668757 | 2.3:+67546429 | MS.gene05834:CDS |
CAAGACTGGAAACTACCGGA+AGG | 0.673422 | 2.3:-67547506 | None:intergenic |
AACAACTGAGAGTTAAGACA+AGG | 0.676479 | 2.3:+67546913 | MS.gene05834:CDS |
CTGGATACAGTCCACCAGGT+GGG | 0.681311 | 2.3:-67547365 | None:intergenic |
AGAGACCATGGTGACCGTGG+AGG | 0.689385 | 2.3:+67546441 | MS.gene05834:CDS |
TCTGAGTCCAAATCTTACCG+GGG | 0.700612 | 2.3:+67550788 | MS.gene05834:CDS |
AGGAATGATGATGCTATGAG+GGG | 0.702663 | 2.3:-67547325 | None:intergenic |
GCTGGATACAGTCCACCAGG+TGG | 0.717990 | 2.3:-67547366 | None:intergenic |
GGAAGGGGAGATGAGTACAG+AGG | 0.743871 | 2.3:-67547489 | None:intergenic |
ACTATGCAAGATCTGCATGG+TGG | 0.749688 | 2.3:+67547441 | MS.gene05834:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTATCTATTTTAAATTTTT+TGG | - | chr2.3:67550554-67550573 | None:intergenic | 10.0% |
!! | AAAAATATTTCCTTCATTTA+TGG | - | chr2.3:67547922-67547941 | None:intergenic | 15.0% |
!! | AACAATATAGAAGTAATAAT+AGG | - | chr2.3:67547732-67547751 | None:intergenic | 15.0% |
!! | AGAATAAAAGAAACATAAAT+AGG | - | chr2.3:67550199-67550218 | None:intergenic | 15.0% |
!! | GAAAAGTTATAAATTCAATA+AGG | + | chr2.3:67546592-67546611 | MS.gene05834:CDS | 15.0% |
!! | GATTTATCTTAAATATTTCT+TGG | + | chr2.3:67547761-67547780 | MS.gene05834:intron | 15.0% |
!!! | ACTGTACATTTAATTTAAAA+CGG | + | chr2.3:67549467-67549486 | MS.gene05834:intron | 15.0% |
!!! | ATCAGAATTTTAAATCTTTT+AGG | + | chr2.3:67548121-67548140 | MS.gene05834:intron | 15.0% |
!!! | ATCTATTTTAAATTTTTTGG+CGG | - | chr2.3:67550551-67550570 | None:intergenic | 15.0% |
!!! | TCAGAATTTTAAATCTTTTA+GGG | + | chr2.3:67548122-67548141 | MS.gene05834:intron | 15.0% |
!!! | TTTATGTTTCTTTTATTCTA+TGG | + | chr2.3:67550200-67550219 | MS.gene05834:intron | 15.0% |
!! | AATATTGAAGAAAAGAAATG+AGG | - | chr2.3:67548405-67548424 | None:intergenic | 20.0% |
!! | AGATAACACTAAAAATTTGA+TGG | - | chr2.3:67550490-67550509 | None:intergenic | 20.0% |
!! | ATTCAAAACAAAATAGGAAA+AGG | - | chr2.3:67548454-67548473 | None:intergenic | 20.0% |
!! | CAAGTTAATATGTATGATTA+TGG | - | chr2.3:67547030-67547049 | None:intergenic | 20.0% |
!! | CTATTAAGTGTTAATATACT+TGG | + | chr2.3:67549258-67549277 | MS.gene05834:intron | 20.0% |
!! | TACAATTAATTCTTCAGATT+GGG | - | chr2.3:67547538-67547557 | None:intergenic | 20.0% |
!! | TTACAATTAATTCTTCAGAT+TGG | - | chr2.3:67547539-67547558 | None:intergenic | 20.0% |
!! | TTATAATGTGGTTAATCTAT+AGG | + | chr2.3:67548289-67548308 | MS.gene05834:intron | 20.0% |
!!! | ATCTTCTATTTTTAGTCATT+TGG | + | chr2.3:67549540-67549559 | MS.gene05834:intron | 20.0% |
!!! | ATTAAATGTGTATTTTATGC+CGG | + | chr2.3:67550726-67550745 | MS.gene05834:intron | 20.0% |
!!! | ATTTTCAACTCTTGATTATA+TGG | + | chr2.3:67549792-67549811 | MS.gene05834:intron | 20.0% |
!!! | CTGTACATTTAATTTAAAAC+GGG | + | chr2.3:67549468-67549487 | MS.gene05834:intron | 20.0% |
!!! | GCTTTTTCAATTTATGATTT+AGG | + | chr2.3:67548836-67548855 | MS.gene05834:intron | 20.0% |
!!! | TCTTCTATTTTTAGTCATTT+GGG | + | chr2.3:67549541-67549560 | MS.gene05834:intron | 20.0% |
!!! | TGTTATTTAGTTTTGCTATT+TGG | + | chr2.3:67550314-67550333 | MS.gene05834:intron | 20.0% |
!!! | TTGTTGCTTTATTTATAATG+TGG | + | chr2.3:67548277-67548296 | MS.gene05834:intron | 20.0% |
!!! | TTTTCAATTTATGATTTAGG+TGG | + | chr2.3:67548839-67548858 | MS.gene05834:intron | 20.0% |
! | AAAATAGATACACACACAAA+GGG | + | chr2.3:67550562-67550581 | MS.gene05834:intron | 25.0% |
! | AACAAAAACAAAATAGAGAC+AGG | - | chr2.3:67549754-67549773 | None:intergenic | 25.0% |
! | ACAAAAACAAAATAGAGACA+GGG | - | chr2.3:67549753-67549772 | None:intergenic | 25.0% |
! | AGTAAGAATCATATCCATAA+TGG | - | chr2.3:67549106-67549125 | None:intergenic | 25.0% |
! | ATGAATAGACAGAAAGAAAA+GGG | - | chr2.3:67550001-67550020 | None:intergenic | 25.0% |
! | ATTATGTCAGAATGTCAATA+AGG | + | chr2.3:67548200-67548219 | MS.gene05834:intron | 25.0% |
! | GAAAACAACACTGAAAAAAA+CGG | - | chr2.3:67550442-67550461 | None:intergenic | 25.0% |
! | GTGCAATCATAAATGAAATT+CGG | + | chr2.3:67548667-67548686 | MS.gene05834:CDS | 25.0% |
! | TAAAATAGATACACACACAA+AGG | + | chr2.3:67550561-67550580 | MS.gene05834:intron | 25.0% |
! | TAAACTTAAATGGAACTTCA+AGG | - | chr2.3:67547886-67547905 | None:intergenic | 25.0% |
! | TAGACAATTTGATTGAGTTT+AGG | + | chr2.3:67549393-67549412 | MS.gene05834:intron | 25.0% |
! | TATCTTAAATATTTCTTGGC+TGG | + | chr2.3:67547765-67547784 | MS.gene05834:intron | 25.0% |
! | TATGAATAGACAGAAAGAAA+AGG | - | chr2.3:67550002-67550021 | None:intergenic | 25.0% |
! | TGTATAATTTACAGCTGATT+TGG | + | chr2.3:67549974-67549993 | MS.gene05834:intron | 25.0% |
! | TTATGGATATGATTCTTACT+CGG | + | chr2.3:67549106-67549125 | MS.gene05834:CDS | 25.0% |
!! | CATAAAGTCTTTTGTTAAAC+TGG | + | chr2.3:67550018-67550037 | MS.gene05834:intron | 25.0% |
!! | GTATTCCTTTTCATCAAAAA+AGG | + | chr2.3:67549138-67549157 | MS.gene05834:intron | 25.0% |
!! | GTGTTAACTTAGATATTTTC+TGG | + | chr2.3:67547130-67547149 | MS.gene05834:intron | 25.0% |
!! | TTAAATGTGTATTTTATGCC+GGG | + | chr2.3:67550727-67550746 | MS.gene05834:intron | 25.0% |
!! | TTCTTTTATTCTATGGAAGA+GGG | + | chr2.3:67550207-67550226 | MS.gene05834:intron | 25.0% |
!! | TTTCTTTTATTCTATGGAAG+AGG | + | chr2.3:67550206-67550225 | MS.gene05834:intron | 25.0% |
!! | TTTTGCTTCTTTGTAAAAGA+TGG | + | chr2.3:67549834-67549853 | MS.gene05834:intron | 25.0% |
!!! | AACAATTTTTTGTCACGTTA+AGG | + | chr2.3:67546677-67546696 | MS.gene05834:CDS | 25.0% |
!!! | ATTTTAAATCTTTTAGGGTG+AGG | + | chr2.3:67548127-67548146 | MS.gene05834:intron | 25.0% |
!!! | GTAAACCTTTTTTGATGAAA+AGG | - | chr2.3:67549146-67549165 | None:intergenic | 25.0% |
!!! | TATTTTAAATTTTTTGGCGG+AGG | - | chr2.3:67550548-67550567 | None:intergenic | 25.0% |
!!! | TTAACTTGCTATTGAAATGA+TGG | + | chr2.3:67547042-67547061 | MS.gene05834:intron | 25.0% |
!!! | TTTTAAATCTTTTAGGGTGA+GGG | + | chr2.3:67548128-67548147 | MS.gene05834:intron | 25.0% |
AAAGTGATAGGGTGTATTAT+AGG | + | chr2.3:67548636-67548655 | MS.gene05834:CDS | 30.0% | |
AAATCTGAATTGAAACAACC+CGG | - | chr2.3:67550748-67550767 | None:intergenic | 30.0% | |
AAGGAGAATTGATGCTTATT+TGG | + | chr2.3:67548046-67548065 | MS.gene05834:intron | 30.0% | |
AATTGAAGTTATACTAGCAG+TGG | + | chr2.3:67549510-67549529 | MS.gene05834:intron | 30.0% | |
AATTGTTATAACTCGATGCT+CGG | - | chr2.3:67546664-67546683 | None:intergenic | 30.0% | |
ACAAAATTGGACAACTCATT+GGG | + | chr2.3:67547577-67547596 | MS.gene05834:CDS | 30.0% | |
ACCATATTGCAGTTAACATA+TGG | - | chr2.3:67548091-67548110 | None:intergenic | 30.0% | |
ACTTGACTTTCTTCATCATA+TGG | + | chr2.3:67549427-67549446 | MS.gene05834:intron | 30.0% | |
AGTTAAATAGTGAATGCTGA+TGG | + | chr2.3:67549616-67549635 | MS.gene05834:intron | 30.0% | |
AGTTTCGATGGAATTTGAAA+TGG | - | chr2.3:67546790-67546809 | None:intergenic | 30.0% | |
ATATCATTGAGCATAGTCAT+TGG | - | chr2.3:67549348-67549367 | None:intergenic | 30.0% | |
ATCATCTCAAATACATGACA+TGG | + | chr2.3:67550283-67550302 | MS.gene05834:intron | 30.0% | |
ATGTCAATAAGGTATATGTC+AGG | + | chr2.3:67548211-67548230 | MS.gene05834:intron | 30.0% | |
CAATTTATGATTTAGGTGGT+CGG | + | chr2.3:67548843-67548862 | MS.gene05834:intron | 30.0% | |
CAGCACATTCAAAACAAAAT+AGG | - | chr2.3:67548460-67548479 | None:intergenic | 30.0% | |
CTTATTCTTTCGTTTCTTCT+CGG | - | chr2.3:67546823-67546842 | None:intergenic | 30.0% | |
CTTGTGTAATATTAGTTGCT+TGG | + | chr2.3:67549310-67549329 | MS.gene05834:intron | 30.0% | |
CTTTCTTCATCATATGGATA+AGG | + | chr2.3:67549433-67549452 | MS.gene05834:intron | 30.0% | |
GAAATAATTCACGGTTTGAA+AGG | + | chr2.3:67550229-67550248 | MS.gene05834:intron | 30.0% | |
GAGTCAGTTAAAAAAAACTG+AGG | - | chr2.3:67547846-67547865 | None:intergenic | 30.0% | |
GGAGGATGTATTGAAAAATA+AGG | + | chr2.3:67548917-67548936 | MS.gene05834:CDS | 30.0% | |
GTTAAAAAAAACTGAGGTCA+TGG | - | chr2.3:67547840-67547859 | None:intergenic | 30.0% | |
TAAGACAAGGACAAATATCA+AGG | + | chr2.3:67546926-67546945 | MS.gene05834:CDS | 30.0% | |
TACAAAATTGTCGAATTCCA+TGG | - | chr2.3:67546991-67547010 | None:intergenic | 30.0% | |
TATATACTTGAGGAGAAATG+TGG | - | chr2.3:67549215-67549234 | None:intergenic | 30.0% | |
TATCATTGAGCATAGTCATT+GGG | - | chr2.3:67549347-67549366 | None:intergenic | 30.0% | |
TCATACACATGATAGGATAA+AGG | + | chr2.3:67550343-67550362 | MS.gene05834:intron | 30.0% | |
TCATTGTCATCTGCATATTT+AGG | - | chr2.3:67548735-67548754 | None:intergenic | 30.0% | |
TCCATATGTTAACTGCAATA+TGG | + | chr2.3:67548087-67548106 | MS.gene05834:intron | 30.0% | |
TTCATGATCAACTTTATGCT+TGG | + | chr2.3:67548356-67548375 | MS.gene05834:intron | 30.0% | |
TTGTAAAAGATGGAAGACAA+TGG | + | chr2.3:67549844-67549863 | MS.gene05834:intron | 30.0% | |
! | AAGGATCTAGGTTGAATAAT+AGG | - | chr2.3:67547399-67547418 | None:intergenic | 30.0% |
! | AAGTCTTTTGTTAAACTGGT+TGG | + | chr2.3:67550022-67550041 | MS.gene05834:intron | 30.0% |
! | AGTCTTTTGTTAAACTGGTT+GGG | + | chr2.3:67550023-67550042 | MS.gene05834:intron | 30.0% |
! | ATCAATTCTCCTTGTTATGA+GGG | - | chr2.3:67547999-67548018 | None:intergenic | 30.0% |
! | CTTGCTCTTTTAAATGTCAA+TGG | + | chr2.3:67550608-67550627 | MS.gene05834:intron | 30.0% |
! | CTTTATGCTTGGTTTACTTT+TGG | + | chr2.3:67548367-67548386 | MS.gene05834:intron | 30.0% |
! | GCATAAAGTTGATCATGAAA+TGG | - | chr2.3:67548355-67548374 | None:intergenic | 30.0% |
! | GGAATTCGACAATTTTGTAT+TGG | + | chr2.3:67546992-67547011 | MS.gene05834:CDS | 30.0% |
! | GTTGTTTCAATTCAGATTTC+AGG | + | chr2.3:67550749-67550768 | MS.gene05834:intron | 30.0% |
! | GTTTTCATTGAGTAGATTAC+AGG | + | chr2.3:67547201-67547220 | MS.gene05834:intron | 30.0% |
! | TAGTTCCATCTAAAGTGATA+GGG | + | chr2.3:67548625-67548644 | MS.gene05834:CDS | 30.0% |
! | TGATGCGCTTTAAACTTAAA+TGG | - | chr2.3:67547896-67547915 | None:intergenic | 30.0% |
! | TTTCTGTAAGTTTTCACACT+AGG | + | chr2.3:67548240-67548259 | MS.gene05834:intron | 30.0% |
!! | GGTTTACTTTTGGTGAATTT+TGG | + | chr2.3:67548377-67548396 | MS.gene05834:intron | 30.0% |
!! | TACTTGGTCTTATTTGTTGT+TGG | + | chr2.3:67549274-67549293 | MS.gene05834:intron | 30.0% |
!! | TTCGACAATTTTGTATTGGT+AGG | + | chr2.3:67546996-67547015 | MS.gene05834:intron | 30.0% |
!!! | CTATTTTTAGTCATTTGGGT+TGG | + | chr2.3:67549545-67549564 | MS.gene05834:intron | 30.0% |
!!! | TTTTCGAGTACGATAGAAAA+TGG | + | chr2.3:67549715-67549734 | MS.gene05834:intron | 30.0% |
AAATCTAGCCAATATCAGGA+AGG | + | chr2.3:67550159-67550178 | MS.gene05834:CDS | 35.0% | |
AACAACTGAGAGTTAAGACA+AGG | + | chr2.3:67546913-67546932 | MS.gene05834:CDS | 35.0% | |
AACCATCTCCAATGTTGAAA+GGG | - | chr2.3:67550095-67550114 | None:intergenic | 35.0% | |
AATCACTATAACTGCAACAG+AGG | + | chr2.3:67547689-67547708 | MS.gene05834:CDS | 35.0% | |
ACACATTTGACATAGCATCA+TGG | + | chr2.3:67550659-67550678 | MS.gene05834:intron | 35.0% | |
ACACTCCCAATAACTTCATT+CGG | - | chr2.3:67546558-67546577 | None:intergenic | 35.0% | |
AGAACTAACCTTCCTGATAT+TGG | - | chr2.3:67550170-67550189 | None:intergenic | 35.0% | |
AGATCCTTTCCTCAACTTAT+AGG | + | chr2.3:67547411-67547430 | MS.gene05834:CDS | 35.0% | |
AGGCAAACGATGTCTAATAA+AGG | - | chr2.3:67550071-67550090 | None:intergenic | 35.0% | |
ATACACCCTATCACTTTAGA+TGG | - | chr2.3:67548633-67548652 | None:intergenic | 35.0% | |
ATCATTTAACAACGAGTCCA+CGG | - | chr2.3:67547966-67547985 | None:intergenic | 35.0% | |
ATGTGGATACAGGAAATACA+TGG | + | chr2.3:67547466-67547485 | MS.gene05834:CDS | 35.0% | |
ATTCAATAAGGCAAGAGAGT+AGG | + | chr2.3:67546604-67546623 | MS.gene05834:CDS | 35.0% | |
CGAGAAGAAACGAAAGAATA+AGG | + | chr2.3:67546821-67546840 | MS.gene05834:CDS | 35.0% | |
CTATCACTTTAGATGGAACT+AGG | - | chr2.3:67548626-67548645 | None:intergenic | 35.0% | |
CTCCTCAAGTATATATGTCT+GGG | + | chr2.3:67549220-67549239 | MS.gene05834:intron | 35.0% | |
CTTAACTCTCAGTTGTTTGA+TGG | - | chr2.3:67546910-67546929 | None:intergenic | 35.0% | |
GACAAAATTGGACAACTCAT+TGG | + | chr2.3:67547576-67547595 | MS.gene05834:CDS | 35.0% | |
GTGTTAACTGCAGATAAACT+TGG | + | chr2.3:67548311-67548330 | MS.gene05834:intron | 35.0% | |
TACTATTAAACGTATGAGGC+AGG | + | chr2.3:67547611-67547630 | MS.gene05834:CDS | 35.0% | |
TATGCCCGAATGAAGTTATT+GGG | + | chr2.3:67546550-67546569 | MS.gene05834:CDS | 35.0% | |
TCCTCAAGTATATATGTCTG+GGG | + | chr2.3:67549221-67549240 | MS.gene05834:intron | 35.0% | |
TCTCCTCAAGTATATATGTC+TGG | + | chr2.3:67549219-67549238 | MS.gene05834:intron | 35.0% | |
TGAAATTCGGAAGAGAACTA+AGG | + | chr2.3:67548680-67548699 | MS.gene05834:CDS | 35.0% | |
TGAATCGGAAGCTGTAAAAA+GGG | + | chr2.3:67547224-67547243 | MS.gene05834:CDS | 35.0% | |
TGAGTAGATTACAGGTGAAT+CGG | + | chr2.3:67547209-67547228 | MS.gene05834:intron | 35.0% | |
TGGAAGAGGGAAATAATTCA+CGG | + | chr2.3:67550220-67550239 | MS.gene05834:intron | 35.0% | |
TGTGAATGACAGAGATGAAA+GGG | + | chr2.3:67546497-67546516 | MS.gene05834:CDS | 35.0% | |
TTCAATAAGGCAAGAGAGTA+GGG | + | chr2.3:67546605-67546624 | MS.gene05834:CDS | 35.0% | |
TTGCAGTTAACATATGGACT+CGG | - | chr2.3:67548085-67548104 | None:intergenic | 35.0% | |
TTGGCGGAGGTTTATATTTA+TGG | - | chr2.3:67550535-67550554 | None:intergenic | 35.0% | |
TTGTCACGTTAAGGATAAGA+AGG | + | chr2.3:67546686-67546705 | MS.gene05834:CDS | 35.0% | |
TTGTTACCAGTTAATTACCG+TGG | + | chr2.3:67547946-67547965 | MS.gene05834:intron | 35.0% | |
TTTCTGAGTCCAAATCTTAC+CGG | + | chr2.3:67550786-67550805 | MS.gene05834:CDS | 35.0% | |
! | AAGGAATGATGATGCTATGA+GGG | - | chr2.3:67547329-67547348 | None:intergenic | 35.0% |
! | AGTTGTCCAATTTTGTCAGA+AGG | - | chr2.3:67547573-67547592 | None:intergenic | 35.0% |
! | ATAAGTTGAGGAAAGGATCT+AGG | - | chr2.3:67547411-67547430 | None:intergenic | 35.0% |
! | CATCAATTCTCCTTGTTATG+AGG | - | chr2.3:67548000-67548019 | None:intergenic | 35.0% |
! | CATTCTTCTAGAAGCCATTA+TGG | + | chr2.3:67549089-67549108 | MS.gene05834:CDS | 35.0% |
! | CTAGTTCCATCTAAAGTGAT+AGG | + | chr2.3:67548624-67548643 | MS.gene05834:CDS | 35.0% |
! | GAGGTACTATTAAACGTATG+AGG | + | chr2.3:67547607-67547626 | MS.gene05834:CDS | 35.0% |
! | GTTGTCCAATTTTGTCAGAA+GGG | - | chr2.3:67547572-67547591 | None:intergenic | 35.0% |
! | TCAATTCTCCTTGTTATGAG+GGG | - | chr2.3:67547998-67548017 | None:intergenic | 35.0% |
! | TCAGATAGTCTTGAGACTAA+GGG | + | chr2.3:67548896-67548915 | MS.gene05834:CDS | 35.0% |
! | TGAATAATAGGATCTGAAGC+TGG | - | chr2.3:67547387-67547406 | None:intergenic | 35.0% |
! | TTCAGATAGTCTTGAGACTA+AGG | + | chr2.3:67548895-67548914 | MS.gene05834:CDS | 35.0% |
!! | AACCTTGATAAGAGCATCTT+GGG | - | chr2.3:67546760-67546779 | None:intergenic | 35.0% |
!! | GAAGTTATTGGGAGTGTTAT+TGG | + | chr2.3:67546561-67546580 | MS.gene05834:CDS | 35.0% |
!! | GATGTGGATTAGGATATGAT+AGG | - | chr2.3:67550374-67550393 | None:intergenic | 35.0% |
!! | GATTTTTGTTGTCCCCATTA+CGG | - | chr2.3:67546467-67546486 | None:intergenic | 35.0% |
!! | TATTGAGGTTGATGATTCCA+AGG | + | chr2.3:67547647-67547666 | MS.gene05834:CDS | 35.0% |
!!! | TTGTTTTGAATGTGCTGTTC+TGG | + | chr2.3:67548463-67548482 | MS.gene05834:intron | 35.0% |
AAAAACGGAGTGAAAACCCT+TGG | - | chr2.3:67550427-67550446 | None:intergenic | 40.0% | |
AAAACGGAGTGAAAACCCTT+GGG | - | chr2.3:67550426-67550445 | None:intergenic | 40.0% | |
AAAATGGCAGACTGACTAGA+GGG | - | chr2.3:67546867-67546886 | None:intergenic | 40.0% | |
AAATATCAAGGTCGTTCCGA+AGG | + | chr2.3:67546938-67546957 | MS.gene05834:CDS | 40.0% | |
AAATGATGAAGATGATGCCC+CGG | + | chr2.3:67548587-67548606 | MS.gene05834:CDS | 40.0% | |
AAGATGGAAGACAATGGCTA+TGG | + | chr2.3:67549850-67549869 | MS.gene05834:intron | 40.0% | |
AATGCTGTTGGCAAAGTGAT+GGG | + | chr2.3:67550124-67550143 | MS.gene05834:CDS | 40.0% | |
AATTGGACAACTCATTGGGA+AGG | + | chr2.3:67547581-67547600 | MS.gene05834:CDS | 40.0% | |
ACAACTATGCAAGATCTGCA+TGG | + | chr2.3:67547438-67547457 | MS.gene05834:CDS | 40.0% | |
ACCATCTCCAATGTTGAAAG+GGG | - | chr2.3:67550094-67550113 | None:intergenic | 40.0% | |
ACCCCAGACATATATACTTG+AGG | - | chr2.3:67549225-67549244 | None:intergenic | 40.0% | |
AGGGTGAATTGATTGCGTAT+AGG | + | chr2.3:67546523-67546542 | MS.gene05834:CDS | 40.0% | |
ATAGATACACACACAAAGGG+AGG | + | chr2.3:67550565-67550584 | MS.gene05834:intron | 40.0% | |
ATGCCACCAATCTGTATGAA+GGG | + | chr2.3:67549887-67549906 | MS.gene05834:CDS | 40.0% | |
ATGTCAATGGCCAAAGTTTC+AGG | + | chr2.3:67550621-67550640 | MS.gene05834:intron | 40.0% | |
ATGTGCATGTGTAATGAGCA+TGG | - | chr2.3:67550705-67550724 | None:intergenic | 40.0% | |
ATTGACCATAATCGCCACAT+AGG | + | chr2.3:67548942-67548961 | MS.gene05834:CDS | 40.0% | |
ATTGGACAACTCATTGGGAA+GGG | + | chr2.3:67547582-67547601 | MS.gene05834:CDS | 40.0% | |
CAACCATCTCCAATGTTGAA+AGG | - | chr2.3:67550096-67550115 | None:intergenic | 40.0% | |
CACACACACACATTACAGAA+TGG | - | chr2.3:67547103-67547122 | None:intergenic | 40.0% | |
CACTAACCCTTCATACAGAT+TGG | - | chr2.3:67549896-67549915 | None:intergenic | 40.0% | |
CACTCCCAATAACTTCATTC+GGG | - | chr2.3:67546557-67546576 | None:intergenic | 40.0% | |
CGCATCAGATCCATAAATGA+AGG | + | chr2.3:67547909-67547928 | MS.gene05834:intron | 40.0% | |
CTATGCCCGAATGAAGTTAT+TGG | + | chr2.3:67546549-67546568 | MS.gene05834:CDS | 40.0% | |
CTTGATCCAGGCATTCATAA+TGG | + | chr2.3:67550865-67550884 | MS.gene05834:CDS | 40.0% | |
GAGCAAATCTAGCCAATATC+AGG | + | chr2.3:67550155-67550174 | MS.gene05834:CDS | 40.0% | |
GCAGGAATTGAAGACAGTAT+AGG | - | chr2.3:67549011-67549030 | None:intergenic | 40.0% | |
GGAATTGAAGACAGTATAGG+TGG | - | chr2.3:67549008-67549027 | None:intergenic | 40.0% | |
GGGACAACAAAAATCAGAAG+AGG | + | chr2.3:67546472-67546491 | MS.gene05834:CDS | 40.0% | |
GGGTAAATAGGAAGTTCAGA+AGG | - | chr2.3:67547348-67547367 | None:intergenic | 40.0% | |
GGGTGTATTATAGGAAGAAG+TGG | + | chr2.3:67548645-67548664 | MS.gene05834:CDS | 40.0% | |
GTGAATCGGAAGCTGTAAAA+AGG | + | chr2.3:67547223-67547242 | MS.gene05834:CDS | 40.0% | |
GTGTGAATGACAGAGATGAA+AGG | + | chr2.3:67546496-67546515 | MS.gene05834:CDS | 40.0% | |
GTTGTAGCACCTATAAGTTG+AGG | - | chr2.3:67547423-67547442 | None:intergenic | 40.0% | |
TAACCCTTCATACAGATTGG+TGG | - | chr2.3:67549893-67549912 | None:intergenic | 40.0% | |
TAATGCTGTTGGCAAAGTGA+TGG | + | chr2.3:67550123-67550142 | MS.gene05834:CDS | 40.0% | |
TAGAACAGCTTCAACAGCTA+CGG | - | chr2.3:67548550-67548569 | None:intergenic | 40.0% | |
TAGATACACACACAAAGGGA+GGG | + | chr2.3:67550566-67550585 | MS.gene05834:intron | 40.0% | |
TATGCCACCAATCTGTATGA+AGG | + | chr2.3:67549886-67549905 | MS.gene05834:CDS | 40.0% | |
TCAAATTCCATCGAAACTGC+TGG | + | chr2.3:67546792-67546811 | MS.gene05834:CDS | 40.0% | |
TGACAATGATGAACTCGTTG+AGG | + | chr2.3:67548746-67548765 | MS.gene05834:CDS | 40.0% | |
TTCTGAGTCCAAATCTTACC+GGG | + | chr2.3:67550787-67550806 | MS.gene05834:CDS | 40.0% | |
! | AAGTTTTCACACTAGGAAGC+AGG | + | chr2.3:67548247-67548266 | MS.gene05834:intron | 40.0% |
! | AGCACCTATAAGTTGAGGAA+AGG | - | chr2.3:67547418-67547437 | None:intergenic | 40.0% |
! | AGGAATGATGATGCTATGAG+GGG | - | chr2.3:67547328-67547347 | None:intergenic | 40.0% |
! | GAAGGAATGATGATGCTATG+AGG | - | chr2.3:67547330-67547349 | None:intergenic | 40.0% |
! | TATAGGTGGTGCTGAAAGAA+CGG | - | chr2.3:67548994-67549013 | None:intergenic | 40.0% |
!! | GAACCTTGATAAGAGCATCT+TGG | - | chr2.3:67546761-67546780 | None:intergenic | 40.0% |
!! | GGGAGTGTTATTGGTAAGAA+TGG | + | chr2.3:67546570-67546589 | MS.gene05834:CDS | 40.0% |
!! | TCTTATTTCTGGCACATCTG+AGG | + | chr2.3:67550823-67550842 | MS.gene05834:CDS | 40.0% |
!!! | AGTCAGTCTGCCATTTTGAT+TGG | + | chr2.3:67546870-67546889 | MS.gene05834:CDS | 40.0% |
AAACAGACTTCAGACAGTGC+TGG | - | chr2.3:67549696-67549715 | None:intergenic | 45.0% | |
AAACGGAGTGAAAACCCTTG+GGG | - | chr2.3:67550425-67550444 | None:intergenic | 45.0% | |
AAGACTGGAAACTACCGGAA+GGG | - | chr2.3:67547508-67547527 | None:intergenic | 45.0% | |
AAGGTTGTGGATCCATTTCC+CGG | + | chr2.3:67546636-67546655 | MS.gene05834:CDS | 45.0% | |
AATCGTCAACAGAGAGACCA+TGG | + | chr2.3:67546429-67546448 | MS.gene05834:CDS | 45.0% | |
ACAAGGATTCGGAACCTATG+TGG | - | chr2.3:67548959-67548978 | None:intergenic | 45.0% | |
ACATTCATCATGACGAGCCT+TGG | - | chr2.3:67547667-67547686 | None:intergenic | 45.0% | |
ACGAGTCCACGGTAATTAAC+TGG | - | chr2.3:67547955-67547974 | None:intergenic | 45.0% | |
ACTATGCAAGATCTGCATGG+TGG | + | chr2.3:67547441-67547460 | MS.gene05834:CDS | 45.0% | |
ACTTTGCCAACAGCATTAGC+AGG | - | chr2.3:67550121-67550140 | None:intergenic | 45.0% | |
AGAGAGTAGGGCAAAAGTCA+AGG | + | chr2.3:67546617-67546636 | MS.gene05834:CDS | 45.0% | |
AGATACACACACAAAGGGAG+GGG | + | chr2.3:67550567-67550586 | MS.gene05834:intron | 45.0% | |
AGATCTGCATGGTGGTTATG+TGG | + | chr2.3:67547449-67547468 | MS.gene05834:CDS | 45.0% | |
ATCTCCAATGTTGAAAGGGG+AGG | - | chr2.3:67550091-67550110 | None:intergenic | 45.0% | |
ATGATGCTATGAGGGGTTTC+TGG | - | chr2.3:67547321-67547340 | None:intergenic | 45.0% | |
ATGTGGCCATTATGAATGCC+TGG | - | chr2.3:67550874-67550893 | None:intergenic | 45.0% | |
CAAAATGGCAGACTGACTAG+AGG | - | chr2.3:67546868-67546887 | None:intergenic | 45.0% | |
CATGGTGGTTATGTGGATAC+AGG | + | chr2.3:67547456-67547475 | MS.gene05834:CDS | 45.0% | |
CATGTACAAATTCTCCCCCA+AGG | + | chr2.3:67547269-67547288 | MS.gene05834:CDS | 45.0% | |
CGAGAGAATGCCTGAAACTT+TGG | - | chr2.3:67550634-67550653 | None:intergenic | 45.0% | |
CTAGCTTATGATCAGAGGAC+CGG | + | chr2.3:67549044-67549063 | MS.gene05834:CDS | 45.0% | |
CTCTGATCATAAGCTAGTGC+AGG | - | chr2.3:67549041-67549060 | None:intergenic | 45.0% | |
CTGTGCCCTTCTGACAAAAT+TGG | + | chr2.3:67547564-67547583 | MS.gene05834:CDS | 45.0% | |
CTTCAACAGCTACGGATTTC+AGG | - | chr2.3:67548542-67548561 | None:intergenic | 45.0% | |
CTTTAGATGGAACTAGGAGC+CGG | - | chr2.3:67548620-67548639 | None:intergenic | 45.0% | |
GAACTTCCTATTTACCCACC+TGG | + | chr2.3:67547351-67547370 | MS.gene05834:CDS | 45.0% | |
GACAGAGATGAAAGGGACAA+GGG | + | chr2.3:67546504-67546523 | MS.gene05834:CDS | 45.0% | |
GTGAGCGTCATACACATGAT+AGG | + | chr2.3:67550336-67550355 | MS.gene05834:intron | 45.0% | |
GTTGTTCCTGCTAATGCTGT+TGG | + | chr2.3:67550112-67550131 | MS.gene05834:CDS | 45.0% | |
TAGGGCAAAAGTCAAGGTTG+TGG | + | chr2.3:67546623-67546642 | MS.gene05834:CDS | 45.0% | |
TCAAGAGGAATGTCCTCCTT+GGG | - | chr2.3:67547288-67547307 | None:intergenic | 45.0% | |
TCCCCTTTCAACATTGGAGA+TGG | + | chr2.3:67550090-67550109 | MS.gene05834:CDS | 45.0% | |
TCTGAGTCCAAATCTTACCG+GGG | + | chr2.3:67550788-67550807 | MS.gene05834:CDS | 45.0% | |
TCTGGTACAGTTGTGTCAAG+AGG | - | chr2.3:67547303-67547322 | None:intergenic | 45.0% | |
TGACAGAGATGAAAGGGACA+AGG | + | chr2.3:67546503-67546522 | MS.gene05834:CDS | 45.0% | |
TGCCCAAGATGCTCTTATCA+AGG | + | chr2.3:67546755-67546774 | MS.gene05834:CDS | 45.0% | |
TTTGCCTCCCCTTTCAACAT+TGG | + | chr2.3:67550084-67550103 | MS.gene05834:CDS | 45.0% | |
! | ATTCTCCTTGTTATGAGGGG+TGG | - | chr2.3:67547995-67548014 | None:intergenic | 45.0% |
! | CTGCACTAGCTTATGATCAG+AGG | + | chr2.3:67549039-67549058 | MS.gene05834:CDS | 45.0% |
! | GATAGTCTTGAGACTAAGGG+AGG | + | chr2.3:67548899-67548918 | MS.gene05834:CDS | 45.0% |
! | GATCGCGTTGCTCTTATTTC+TGG | + | chr2.3:67550812-67550831 | MS.gene05834:CDS | 45.0% |
!! | GTTGGCAAAGTGATGGGTAA+AGG | + | chr2.3:67550130-67550149 | MS.gene05834:CDS | 45.0% |
!!! | ATCTTTTAGGGTGAGGGACA+TGG | + | chr2.3:67548134-67548153 | MS.gene05834:intron | 45.0% |
!!! | CATTTTGATTGGCAAGGCTG+GGG | + | chr2.3:67546881-67546900 | MS.gene05834:CDS | 45.0% |
!!! | CCATTTTGATTGGCAAGGCT+GGG | + | chr2.3:67546880-67546899 | MS.gene05834:CDS | 45.0% |
!!! | GTCTGCCATTTTGATTGGCA+AGG | + | chr2.3:67546875-67546894 | MS.gene05834:CDS | 45.0% |
AAACGTATGAGGCAGGCTAG+TGG | + | chr2.3:67547618-67547637 | MS.gene05834:CDS | 50.0% | |
AAGAGGAATGTCCTCCTTGG+GGG | - | chr2.3:67547286-67547305 | None:intergenic | 50.0% | |
ACTAGGAGCCGGATTGAAAC+CGG | - | chr2.3:67548609-67548628 | None:intergenic | 50.0% | |
ACTGCCAGCGTACAAGGATT+CGG | - | chr2.3:67548970-67548989 | None:intergenic | 50.0% | |
AGAAGAATGCATGCCCAGTC+CGG | - | chr2.3:67549078-67549097 | None:intergenic | 50.0% | |
AGACTGGAAACTACCGGAAG+GGG | - | chr2.3:67547507-67547526 | None:intergenic | 50.0% | |
AGTCCACCAGGTGGGTAAAT+AGG | - | chr2.3:67547360-67547379 | None:intergenic | 50.0% | |
ATGATGCCCCGGTTTCAATC+CGG | + | chr2.3:67548598-67548617 | MS.gene05834:CDS | 50.0% | |
CAAGACTGGAAACTACCGGA+AGG | - | chr2.3:67547509-67547528 | None:intergenic | 50.0% | |
CAAGAGGAATGTCCTCCTTG+GGG | - | chr2.3:67547287-67547306 | None:intergenic | 50.0% | |
CAGACTGACTAGAGGGAACA+AGG | - | chr2.3:67546860-67546879 | None:intergenic | 50.0% | |
CCCAGCCTTGCCAATCAAAA+TGG | - | chr2.3:67546883-67546902 | None:intergenic | 50.0% | |
CGCAGCTGAAAACTTGATCC+AGG | + | chr2.3:67550853-67550872 | MS.gene05834:CDS | 50.0% | |
CGGAACCTATGTGGCGATTA+TGG | - | chr2.3:67548950-67548969 | None:intergenic | 50.0% | |
CTTCCGGTAGTTTCCAGTCT+TGG | + | chr2.3:67547507-67547526 | MS.gene05834:CDS | 50.0% | |
CTTCCTATTTACCCACCTGG+TGG | + | chr2.3:67547354-67547373 | MS.gene05834:CDS | 50.0% | |
GATACACACACAAAGGGAGG+GGG | + | chr2.3:67550568-67550587 | MS.gene05834:intron | 50.0% | |
GCACCAAGACTGGAAACTAC+CGG | - | chr2.3:67547513-67547532 | None:intergenic | 50.0% | |
GCATCTTGGGCAGCACATAA+AGG | - | chr2.3:67546747-67546766 | None:intergenic | 50.0% | |
GGAATCTCCAGCAGTTTCGA+TGG | - | chr2.3:67546802-67546821 | None:intergenic | 50.0% | |
GTACAAATTCTCCCCCAAGG+AGG | + | chr2.3:67547272-67547291 | MS.gene05834:CDS | 50.0% | |
GTCAAGAGGAATGTCCTCCT+TGG | - | chr2.3:67547289-67547308 | None:intergenic | 50.0% | |
TAGGACGAGGGATGTGGATT+AGG | - | chr2.3:67550384-67550403 | None:intergenic | 50.0% | |
TATAACTCGATGCTCGGCAC+CGG | - | chr2.3:67546658-67546677 | None:intergenic | 50.0% | |
TATGATCAGAGGACCGGAAG+CGG | + | chr2.3:67549050-67549069 | MS.gene05834:CDS | 50.0% | |
TCTGTACTCATCTCCCCTTC+CGG | + | chr2.3:67547491-67547510 | MS.gene05834:CDS | 50.0% | |
!! | AGATTGGGAAGCACCAAGAC+TGG | - | chr2.3:67547523-67547542 | None:intergenic | 50.0% |
!! | GGCAAAGTGATGGGTAAAGG+TGG | + | chr2.3:67550133-67550152 | MS.gene05834:CDS | 50.0% |
!!! | GCCATTTTGATTGGCAAGGC+TGG | + | chr2.3:67546879-67546898 | MS.gene05834:CDS | 50.0% |
AACCCTTGGGGTCCATTCGA+TGG | - | chr2.3:67550413-67550432 | None:intergenic | 55.0% | |
AACGGAACTGCCAGCGTACA+AGG | - | chr2.3:67548976-67548995 | None:intergenic | 55.0% | |
ATAACTCGATGCTCGGCACC+GGG | - | chr2.3:67546657-67546676 | None:intergenic | 55.0% | |
CAACTCATTGGGAAGGGAGG+AGG | + | chr2.3:67547588-67547607 | MS.gene05834:CDS | 55.0% | |
CTAGGAGCCGGATTGAAACC+GGG | - | chr2.3:67548608-67548627 | None:intergenic | 55.0% | |
CTGGATACAGTCCACCAGGT+GGG | - | chr2.3:67547368-67547387 | None:intergenic | 55.0% | |
CTGTGCCACCCCTCATAACA+AGG | + | chr2.3:67547987-67548006 | MS.gene05834:intron | 55.0% | |
GAAGCTGGATACAGTCCACC+AGG | - | chr2.3:67547372-67547391 | None:intergenic | 55.0% | |
GACCATCGAATGGACCCCAA+GGG | + | chr2.3:67550408-67550427 | MS.gene05834:intron | 55.0% | |
GCGATCACCCCGGTAAGATT+TGG | - | chr2.3:67550798-67550817 | None:intergenic | 55.0% | |
GGAAGGGGAGATGAGTACAG+AGG | - | chr2.3:67547492-67547511 | None:intergenic | 55.0% | |
GGACAACTCATTGGGAAGGG+AGG | + | chr2.3:67547585-67547604 | MS.gene05834:CDS | 55.0% | |
GGCTAGTGGTGCTCGTATTG+AGG | + | chr2.3:67547632-67547651 | MS.gene05834:CDS | 55.0% | |
GGTTCCGAATCCTTGTACGC+TGG | + | chr2.3:67548963-67548982 | MS.gene05834:CDS | 55.0% | |
TAAGAGCAACGCGATCACCC+CGG | - | chr2.3:67550808-67550827 | None:intergenic | 55.0% | |
TAGGAGCCGGATTGAAACCG+GGG | - | chr2.3:67548607-67548626 | None:intergenic | 55.0% | |
TCAGGGTCAGCTGCATCCTT+CGG | - | chr2.3:67546957-67546976 | None:intergenic | 55.0% | |
AGAGACCATGGTGACCGTGG+AGG | + | chr2.3:67546441-67546460 | MS.gene05834:CDS | 60.0% | |
CAGAGAGACCATGGTGACCG+TGG | + | chr2.3:67546438-67546457 | MS.gene05834:CDS | 60.0% | |
CCATGGCACACGAGTGCTCA+GGG | - | chr2.3:67546974-67546993 | None:intergenic | 60.0% | |
GCTAGTGCAGGAGCAGTAGC+AGG | - | chr2.3:67549029-67549048 | None:intergenic | 60.0% | |
GCTGGATACAGTCCACCAGG+TGG | - | chr2.3:67547369-67547388 | None:intergenic | 60.0% | |
GGGAGGGGGAGAGAGAGATA+TGG | + | chr2.3:67550582-67550601 | MS.gene05834:intron | 60.0% | |
GTGACCGTGGAGGCCGTAAT+GGG | + | chr2.3:67546451-67546470 | MS.gene05834:CDS | 60.0% | |
TCCATGGCACACGAGTGCTC+AGG | - | chr2.3:67546975-67546994 | None:intergenic | 60.0% | |
TGACCGTGGAGGCCGTAATG+GGG | + | chr2.3:67546452-67546471 | MS.gene05834:CDS | 60.0% | |
TGTCCCCATTACGGCCTCCA+CGG | - | chr2.3:67546458-67546477 | None:intergenic | 60.0% | |
ACCGGAAGCGGAACCGGACT+GGG | + | chr2.3:67549062-67549081 | MS.gene05834:CDS | 65.0% | |
CAGAGGACCGGAAGCGGAAC+CGG | + | chr2.3:67549056-67549075 | MS.gene05834:CDS | 65.0% | |
CCCTGAGCACTCGTGTGCCA+TGG | + | chr2.3:67546971-67546990 | MS.gene05834:CDS | 65.0% | |
GGTGACCGTGGAGGCCGTAA+TGG | + | chr2.3:67546450-67546469 | MS.gene05834:CDS | 65.0% | |
TACGGCCTCCACGGTCACCA+TGG | - | chr2.3:67546449-67546468 | None:intergenic | 65.0% | |
! | CGATGCTCGGCACCGGGAAA+TGG | - | chr2.3:67546651-67546670 | None:intergenic | 65.0% |
GACCGGAAGCGGAACCGGAC+TGG | + | chr2.3:67549061-67549080 | MS.gene05834:CDS | 70.0% | |
GCCCAGTCCGGTTCCGCTTC+CGG | - | chr2.3:67549066-67549085 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 67546408 | 67550895 | 67546408 | ID=MS.gene05834 |
chr2.3 | mRNA | 67546408 | 67550895 | 67546408 | ID=MS.gene05834.t1;Parent=MS.gene05834 |
chr2.3 | exon | 67546408 | 67547013 | 67546408 | ID=MS.gene05834.t1.exon1;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67546408 | 67547013 | 67546408 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
chr2.3 | exon | 67547216 | 67547710 | 67547216 | ID=MS.gene05834.t1.exon2;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67547216 | 67547710 | 67547216 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
chr2.3 | exon | 67548528 | 67548767 | 67548528 | ID=MS.gene05834.t1.exon3;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67548528 | 67548767 | 67548528 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
chr2.3 | exon | 67548858 | 67549127 | 67548858 | ID=MS.gene05834.t1.exon4;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67548858 | 67549127 | 67548858 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
chr2.3 | exon | 67549853 | 67549908 | 67549853 | ID=MS.gene05834.t1.exon5;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67549853 | 67549908 | 67549853 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
chr2.3 | exon | 67550078 | 67550180 | 67550078 | ID=MS.gene05834.t1.exon6;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67550078 | 67550180 | 67550078 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
chr2.3 | exon | 67550764 | 67550895 | 67550764 | ID=MS.gene05834.t1.exon7;Parent=MS.gene05834.t1 |
chr2.3 | CDS | 67550764 | 67550895 | 67550764 | ID=cds.MS.gene05834.t1;Parent=MS.gene05834.t1 |
Gene Sequence |
Protein sequence |